Rmu_co8501807.1_g000001

Vacuolar protein-sorting-associated protein 11 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8501807.1
OG0012419
Physical Location & Seq
Forward (+)
1 .. 2786
2786 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8501807.1_g000001.1.cds

Sequence Viewer

Length: 2457 bp
gaggaagtaacgggcaagatcgagtgctgttcgagcgggcgaggcaaggtggtgatcggctgcgacgacggcaccgtcagcttcctcgaccgcagcctccacttcagctacggcttccaagctcactcctccgttctcttccttcagcagctcaagcaaagaaactttttggtgacaattggagacgatgaacaaatctcggcgcagcaatcaaggtgcctcaaggtctttgacctagataggatacagcccgagggttcgagctcgacgagccccgattgcattggcatcttgaggatttttaccaaccaatttcctgaagcaaagattacatcgtttttagtactagaggaagcgccgccgatactacttatagctattggattagataatggctgcatttactgcattaaaggggatattgcacgggagcgtatcacccggttcaagctccaggtgaataatgtttctgacaagagccagtgctcgatcacgggattggggttcagagtggatggtcaggcccttcagttgtttgctgtgacaccgtcttctgtgagcttgttcatcttgcagaatcaaccatcaagggggcaaaccctagatcagattggaggcaatgttaacagtgtcgccatgagtgatcgtggggagttgataattggtcgacctgaggctgtgtatttttatgaagttgatgggcgtggtccttgttgggcttttgaaggagaaaagaaatttttaggctggtttcgtggatatcttctgtgtattatagaagatcagagaagtggtaatcacactttcaacatatatgacctgaagaaccatttaattgcccacagccttgtggtaaaagaggtttctcacatgctctgcgaatggggtagcataatacttataatggctgacaagtccgctttgtgcattggggagaaggatatggagagcaagttagatatgctttttaagaagaatctatatacggttgccattaaccttgtccagagtcagcaagctgatgctgccgcaactgctgaagtgctaagaaagtatggtgatcatctttatagcaagcaagattatgatgaggcaatggcccagtatatccataccattggtcaccttgagccatcttatgttatacaaaagtttctagatgcgcaacgaatctacaatcttacgaattacttggagaaattacatgagaaggggcttgcttctaaagatcataccactcttctattgaactgctacaccaaattgaaagatgttgacaagctaaatgtgttcattaaaagtgaggatggtcttggggaacataggtttgatgtggagacggcaatacgggtctgccgtgctaccaactactatgagcatgcaatgtatgttgctaagaaggcagggaagcatgagtggtacttgaagatcttacttgaagaccttggtagatatgaggaagccttgcaatatatttcaagccttgagccaagccaagctggagtaacagtcaaagagtacggtaagattctgatagagcacaagcctgaggagacaattgagatactgatgaagctgtgcactgaggatggagaatcagccaagagaggacgcactaatggtgcatacttaactatgttaccatctccggttgatttcctgaacatcttcatccatcatcttcagtcacttatggttttccttgaaaagtataccaacaaggtcaaagactctcctgctcaagtagaaatccataacacactcttggagttgtatttgtcgaatgacttgaacttcccgttgatgtcgcaagctagcaatggtggagatataagtgttagggctattagaccgggagcagccacaatgtcaaaagctgagtcgaatgggaaatttgttgctgatggcaaagacttaactcaggaaatggaccgtatggaaaggcaagagaaagggctaagactgctaaagagtgcatggccgtctgagctggaacatccgctttatgatgttgatcttgccataatcctctgcgaaatgaatgaatttaaggaagggcttctctatatatatgagaaaatgaaactctataaagaggtgatttcttgctacatgcaagcccatgaccatgaaggtttgattgcatgctgcaaacgattaggggattcaggtaagggtggggacccaactctttgggcagatctgctgaaatattttggtgaacttggagaagattgttccaaagaagtgaaggaagttttgacgtatatagaaagagatgatatcttgcctcctattattgttcttcaaacactgtctagaaatccatgcctcacactctctgtcattaaggagtacattgctcgaaagcttgaacaagaatcaaaactgattgaagaggaccgtcgagctattgagaagtatcaggttggtgattgctgcagctgtcattcgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000323 GO:0000325 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005768 GO:0005769 GO:0005770 GO:0005773 GO:0005774 GO:0005856 GO:0005884 GO:0006810 GO:0006887 GO:0006904 GO:0006906 GO:0006996 GO:0007032 GO:0007033 GO:0007034 GO:0007040 GO:0007041 GO:0008150 GO:0008333 GO:0009705 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010256 GO:0010604 GO:0012505 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0019222 GO:0019904 GO:0019905 GO:0022406 GO:0030139 GO:0030674 GO:0030897 GO:0031090 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031338 GO:0031410 GO:0031982 GO:0032268 GO:0032270 GO:0032386 GO:0032388 GO:0032879 GO:0032940 GO:0032991 GO:0033043 GO:0033263 GO:0034058 GO:0035542 GO:0042144 GO:0042176 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043254 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0046903 GO:0046907 GO:0048278 GO:0048284 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051049 GO:0051050 GO:0051128 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051640 GO:0051641 GO:0051649 GO:0060090 GO:0060255 GO:0060341 GO:0060627 GO:0061024 GO:0061025 GO:0065007 GO:0071840 GO:0080090 GO:0080171 GO:0090174 GO:0097576 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0099023 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140029 GO:0140056 GO:1901998 GO:1902115 GO:1903362 GO:1903364 GO:1903649 GO:1903651 GO:2000641 GO:2000643
KEGG Pathways
Metabolic & Signaling
ko04138 map04138
Pfam Domains
Protein Families
Clathrin VPS11_C zf-C3H2C3

Protein Analysis

818

Amino Acids

92.44

Weight (kDa)

5.49

Isoelectric Point (pI)

38.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012419)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05170
fragaria_vesca FvH4_6g40910 FvH4_6g40910
malus_domestica MD09G1123500.v1.1 MD17G1113900.v1.1
prunus_persica Prupe.3G200600_v2.0.a1
pyrus_communis pycom09g04750 pycom17g10560
rosa_chinensis RchiOBHm_Chr2g0156491
rosa_laevigata RLG00000020917
rosa_multiflora Rmu_co8501807.1_g000001 Rmu_sc0005392.1_g000009
rosa_roxburghii Rroxscaffold_2G00092980
rosa_rugosa Rorug02G0453700
rosa_samantha Rh2AG519800 Rh2BG532100 Rh2CG504800 Rh2DG541100
rosa_wichuraiana Rw2G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 902
AasI GACNNNNNNGTC 1 cut(s) 74
Acc16I TGCGCA 1 cut(s) 1164
AccB1I GGYRCC 2 cut(s) 71, 216
AccBSI CCGCTC 1 cut(s) 36
AccI GTMKAC 2 cut(s) 667, 1712
AciI CCGC 6 cut(s) 36, 91, 359, 918, 1029, 2000
AcoI YGGCCR 1 cut(s) 1979
AcsI RAATTY 3 cut(s) 737, 1892, 2045
AcuI CTGAAG 7 cut(s) 88, 128, 339, 512, 842, 1059, 1667
AfaI GTAC 4 cut(s) 345, 1421, 1520, 2357
AfiI CCNNNNNNNGG 1 cut(s) 590
AjnI CCWGG 1 cut(s) 453
Alw21I GWGCWC 4 cut(s) 266, 488, 1542, 1583
Alw26I GTCTC 3 cut(s) 177, 1331, 1547
Alw44I GTGCAC 1 cut(s) 1579
Ama87I CYCGRG 1 cut(s) 251
AoxI GGCC 3 cut(s) 522, 1098, 1979
ApaLI GTGCAC 1 cut(s) 1579
ApoI RAATTY 3 cut(s) 737, 1892, 2045
ArsI GACNNNNNNTTYG 2 cut(s) 1865, 1897
Asp700I GAANNNNTTC 2 cut(s) 1667, 2058
AspLEI GCGC 3 cut(s) 205, 358, 1165
AspS9I GGNCC 6 cut(s) 523, 707, 1099, 1930, 2182, 2401
AsuC2I CCSGG 2 cut(s) 442, 1854
AsuHPI GGTGA 9 cut(s) 64, 184, 430, 469, 1070, 1115, 2110, 2231, 2444
AsuNHI GCTAGC 1 cut(s) 1814
AvaI CYCGRG 1 cut(s) 251
AvaII GGWCC 4 cut(s) 707, 1930, 2182, 2401
AxyI CCTNAGG 2 cut(s) 672, 1548
BaeGI GKGCMC 1 cut(s) 1583
BanI GGYRCC 2 cut(s) 71, 216
BanII GRGCYC 2 cut(s) 266, 275
BbsI GAAGAC 2 cut(s) 543, 1446
Bbv12I GWGCWC 4 cut(s) 266, 488, 1542, 1583
BbvI GCAGC 9 cut(s) 47, 105, 160, 217, 383, 1012, 1871, 2135, 2426
BccI CCATC 9 cut(s) 509, 592, 692, 1141, 1301, 1583, 1651, 1683, 1898
BceAI ACGGC 5 cut(s) 85, 127, 1341, 1356, 1966
BciT130I CCWGG 1 cut(s) 455
BciVI GTATCC 1 cut(s) 237
BclI TGATCA 1 cut(s) 1060
BcnI CCSGG 2 cut(s) 442, 1854
BcoDI GTCTC 3 cut(s) 177, 1331, 1547
BfaI CTAG 6 cut(s) 236, 347, 602, 1157, 1815, 2319
BfmI CTRYAG 1 cut(s) 2440
BfoI RGCGCY 1 cut(s) 359
BfuI GTATCC 1 cut(s) 237
BglII AGATCT 2 cut(s) 1428, 2200
BmcAI AGTACT 1 cut(s) 345
Bme1390I CCNGG 3 cut(s) 442, 455, 1854
Bme18I GGWCC 4 cut(s) 707, 1930, 2182, 2401
BmeT110I CYCGRG 1 cut(s) 251
BmgT120I GGNCC 6 cut(s) 523, 707, 1099, 1930, 2182, 2401
BmiI GGNNCC 4 cut(s) 73, 218, 2183, 2184
BmrFI CCNGG 3 cut(s) 442, 455, 1854
BmrI ACTGGG 1 cut(s) 1096
BmsI GCATC 3 cut(s) 297, 1012, 1150
BmtI GCTAGC 1 cut(s) 1818
BmuI ACTGGG 1 cut(s) 1096
BpiI GAAGAC 2 cut(s) 543, 1446
BpmI CTGGAG 2 cut(s) 437, 1521
BpuEI CTTGAG 6 cut(s) 137, 206, 313, 1148, 1505, 1725
BpuMI CCSGG 2 cut(s) 442, 1854
BsaBI GATNNNNATC 1 cut(s) 2013
BsaJI CCNNGG 2 cut(s) 252, 1444
BsaWI WCCGGW 1 cut(s) 1648
BsaXI ACNNNNNCTCC 6 cut(s) 606, 636, 938, 968, 1494, 1524
Bsc4I CCNNNNNNNGG 1 cut(s) 590
Bse1I ACTGG 2 cut(s) 481, 1102
Bse21I CCTNAGG 2 cut(s) 672, 1548
Bse3DI GCAATG 5 cut(s) 625, 1101, 1389, 1825, 2358
Bse8I GATNNNNATC 1 cut(s) 2013
BseBI CCWGG 1 cut(s) 455
BseDI CCNNGG 2 cut(s) 252, 1444
BseGI GGATG 5 cut(s) 520, 1312, 1594, 1671, 1996
BseJI GATNNNNATC 1 cut(s) 2013
BseLI CCNNNNNNNGG 1 cut(s) 590
BseMI GCAATG 5 cut(s) 625, 1101, 1389, 1825, 2358
BseMII CTCAG 6 cut(s) 663, 1539, 1575, 1869, 1934, 1977
BseNI ACTGG 2 cut(s) 481, 1102
BseRI GAGGAG 2 cut(s) 118, 1565
BseSI GKGCMC 1 cut(s) 1583
BseXI GCAGC 9 cut(s) 47, 105, 160, 217, 383, 1012, 1871, 2135, 2426
Bsh1285I CGRYCG 1 cut(s) 91
BshFI GGCC 3 cut(s) 524, 1100, 1981
BshNI GGYRCC 2 cut(s) 71, 216
BsiEI CGRYCG 1 cut(s) 91
BsiHKAI GWGCWC 4 cut(s) 266, 488, 1542, 1583
BsiHKCI CYCGRG 1 cut(s) 251
BsiSI CCGG 3 cut(s) 442, 1649, 1853
BslFI GGGAC 1 cut(s) 2195
BslI CCNNNNNNNGG 1 cut(s) 590
BsmAI GTCTC 3 cut(s) 177, 1331, 1547
BsmBI CGTCTC 2 cut(s) 177, 1331
BsmFI GGGAC 1 cut(s) 2195
BsnI GGCC 3 cut(s) 524, 1100, 1981
BsoBI CYCGRG 1 cut(s) 251
Bsp1286I GDGCHC 5 cut(s) 266, 275, 488, 1542, 1583
BspACI CCGC 6 cut(s) 36, 91, 359, 918, 1029, 2000
BspANI GGCC 3 cut(s) 524, 1100, 1981
BspCNI CTCAG 6 cut(s) 664, 1540, 1576, 1870, 1933, 1978
BspLI GGNNCC 4 cut(s) 73, 218, 2183, 2184
BspMAI CTGCAG 1 cut(s) 2444
BspOI GCTAGC 1 cut(s) 1818
BspT107I GGYRCC 2 cut(s) 71, 216
BsrBI CCGCTC 1 cut(s) 36
BsrDI GCAATG 5 cut(s) 625, 1101, 1389, 1825, 2358
BsrI ACTGG 2 cut(s) 481, 1102
BssECI CCNNGG 2 cut(s) 252, 1444
BssNAI GTATAC 1 cut(s) 1713
BssT1I CCWWGG 1 cut(s) 1444
Bst1107I GTATAC 1 cut(s) 1713
Bst2UI CCWGG 1 cut(s) 455
Bst4CI ACNGT 9 cut(s) 76, 549, 629, 988, 1510, 1523, 1934, 2316, 2405
Bst6I CTCTTC 3 cut(s) 143, 1245, 2391
BstAPI GCANNNNNTGC 1 cut(s) 405
BstC8I GCNNGC 9 cut(s) 38, 1017, 1076, 1218, 1380, 1812, 1816, 2118, 2146
BstDEI CTNAG 9 cut(s) 672, 1046, 1395, 1548, 1584, 1878, 1920, 1958, 1986
BstEII GGTNACC 1 cut(s) 1121
BstF5I GGATG 5 cut(s) 520, 1312, 1594, 1671, 1996
BstH2I RGCGCY 1 cut(s) 359
BstHHI GCGC 3 cut(s) 205, 358, 1165
BstMAI GTCTC 3 cut(s) 177, 1331, 1547
BstMCI CGRYCG 1 cut(s) 91
BstNI CCWGG 1 cut(s) 455
BstNSI RCATGY 4 cut(s) 874, 1382, 2116, 2148
BstPI GGTNACC 1 cut(s) 1121
BstSCI CCNGG 3 cut(s) 440, 453, 1852
BstSFI CTRYAG 1 cut(s) 2440
BstSLI GKGCMC 1 cut(s) 1583
BstV1I GCAGC 9 cut(s) 47, 105, 160, 217, 383, 1012, 1871, 2135, 2426
BstV2I GAAGAC 2 cut(s) 543, 1446
BstX2I RGATCY 2 cut(s) 1428, 2200
BstXI CCANNNNNNTGG 2 cut(s) 1118, 2193
BstYI RGATCY 2 cut(s) 1428, 2200
BstZ17I GTATAC 1 cut(s) 1713
Bsu36I CCTNAGG 2 cut(s) 672, 1548
BsuI GTATCC 1 cut(s) 237
BsuRI GGCC 3 cut(s) 524, 1100, 1981
BtsCI GGATG 5 cut(s) 520, 1312, 1594, 1671, 1996
BtsIMutI CAGTG 4 cut(s) 488, 634, 1581, 2312
Cac8I GCNNGC 9 cut(s) 38, 1017, 1076, 1218, 1380, 1812, 1816, 2118, 2146
CfoI GCGC 3 cut(s) 205, 358, 1165
Cfr13I GGNCC 6 cut(s) 523, 707, 1099, 1930, 2182, 2401
CseI GACGC 1 cut(s) 1620
Csp6I GTAC 4 cut(s) 344, 1420, 1519, 2356
CviQI GTAC 4 cut(s) 344, 1420, 1519, 2356
DdeI CTNAG 9 cut(s) 672, 1046, 1395, 1548, 1584, 1878, 1920, 1958, 1986
DrdI GACNNNNNNGTC 1 cut(s) 74
DseDI GACNNNNNNGTC 1 cut(s) 74
EaeI YGGCCR 1 cut(s) 1979
Eam1104I CTCTTC 3 cut(s) 143, 1245, 2391
EarI CTCTTC 3 cut(s) 143, 1245, 2391
Ecl136II GAGCTC 1 cut(s) 264
Eco130I CCWWGG 1 cut(s) 1444
Eco24I GRGCYC 2 cut(s) 266, 275
Eco32I GATATC 2 cut(s) 761, 2284
Eco47I GGWCC 4 cut(s) 707, 1930, 2182, 2401
Eco53kI GAGCTC 1 cut(s) 264
Eco57I CTGAAG 7 cut(s) 88, 128, 339, 512, 842, 1059, 1667
Eco81I CCTNAGG 2 cut(s) 672, 1548
Eco88I CYCGRG 1 cut(s) 251
Eco91I GGTNACC 1 cut(s) 1121
EcoICRI GAGCTC 1 cut(s) 264
EcoO109I RGGNCCY 2 cut(s) 523, 2182
EcoO65I GGTNACC 1 cut(s) 1121
EcoRII CCWGG 1 cut(s) 453
EcoRV GATATC 2 cut(s) 761, 2284
EcoT14I CCWWGG 1 cut(s) 1444
EcoT38I GRGCYC 2 cut(s) 266, 275
ErhI CCWWGG 1 cut(s) 1444
Esp3I CGTCTC 2 cut(s) 177, 1331
FaqI GGGAC 1 cut(s) 2195
FauI CCCGC 1 cut(s) 29
FbaI TGATCA 1 cut(s) 1060
FblI GTMKAC 2 cut(s) 667, 1712
FokI GGATG 5 cut(s) 527, 1319, 1601, 1658, 1983
FriOI GRGCYC 2 cut(s) 266, 275
FspBI CTAG 6 cut(s) 236, 347, 602, 1157, 1815, 2319
FspI TGCGCA 1 cut(s) 1164
GlaI GCGC 3 cut(s) 204, 357, 1164
GsuI CTGGAG 2 cut(s) 437, 1521
HaeII RGCGCY 1 cut(s) 359
HaeIII GGCC 3 cut(s) 524, 1100, 1981
HapII CCGG 3 cut(s) 442, 1649, 1853
HgaI GACGC 1 cut(s) 1620
HhaI GCGC 3 cut(s) 205, 358, 1165
Hin6I GCGC 3 cut(s) 203, 356, 1163
HinP1I GCGC 3 cut(s) 203, 356, 1163
HincII GTYRAC 3 cut(s) 625, 668, 1276
HindII GTYRAC 3 cut(s) 625, 668, 1276
HindIII AAGCTT 1 cut(s) 2369
HpaI GTTAAC 1 cut(s) 625
HpaII CCGG 3 cut(s) 442, 1649, 1853
HphI GGTGA 9 cut(s) 64, 184, 430, 469, 1070, 1115, 2110, 2231, 2444
Hpy166II GTNNAC 6 cut(s) 625, 668, 1276, 1581, 1713, 2222
Hpy188I TCNGA 6 cut(s) 472, 509, 609, 786, 1533, 1987
Hpy188III TCNNGA 7 cut(s) 292, 317, 1006, 1157, 1660, 1922, 2319
Hpy8I GTNNAC 6 cut(s) 625, 668, 1276, 1581, 1713, 2222
Hpy99I CGWCG 4 cut(s) 68, 71, 271, 2409
HpyAV CCTTC 9 cut(s) 152, 536, 719, 931, 1204, 1393, 2048, 2126, 2245
HpyCH4III ACNGT 9 cut(s) 76, 549, 629, 988, 1510, 1523, 1934, 2316, 2405
HpyCH4IV ACGT 1 cut(s) 2264
HpyF3I CTNAG 9 cut(s) 672, 1046, 1395, 1548, 1584, 1878, 1920, 1958, 1986
HpySE526I ACGT 1 cut(s) 2264
HspAI GCGC 3 cut(s) 203, 356, 1163
KflI GGGWCCC 1 cut(s) 2182
Ksp22I TGATCA 1 cut(s) 1060
KspAI GTTAAC 1 cut(s) 625
LmnI GCTCC 3 cut(s) 430, 456, 1856
Lsp1109I GCAGC 9 cut(s) 47, 105, 160, 217, 383, 1012, 1871, 2135, 2426
LweI GCATC 3 cut(s) 297, 1012, 1150
MaeI CTAG 6 cut(s) 236, 347, 602, 1157, 1815, 2319
MaeII ACGT 1 cut(s) 2264
MaeIII GTNAC 7 cut(s) 7, 172, 541, 1121, 1504, 1638, 1686
MbiI CCGCTC 1 cut(s) 36
MfeI CAATTG 2 cut(s) 177, 1557
MflI RGATCY 2 cut(s) 1428, 2200
MhlI GDGCHC 5 cut(s) 266, 275, 488, 1542, 1583
MlyI GAGTC 3 cut(s) 1018, 1724, 1889
MroXI GAANNNNTTC 2 cut(s) 1667, 2058
MslI CAYNNNNRTG 1 cut(s) 2127
MspA1I CMGCKG 1 cut(s) 2445
MspI CCGG 3 cut(s) 442, 1649, 1853
MspR9I CCNGG 3 cut(s) 442, 455, 1854
MunI CAATTG 2 cut(s) 177, 1557
MvaI CCWGG 1 cut(s) 455
NciI CCSGG 2 cut(s) 442, 1854
NheI GCTAGC 1 cut(s) 1814
NlaIV GGNNCC 4 cut(s) 73, 218, 2183, 2184
NmeAIII GCCGAG 1 cut(s) 179
NmuCI GTSAC 4 cut(s) 172, 541, 1121, 1686
NsbI TGCGCA 1 cut(s) 1164
NspI RCATGY 4 cut(s) 874, 1382, 2116, 2148
PaeI GCATGC 2 cut(s) 1382, 2148
PcsI WCGNNNNNNNCGW 4 cut(s) 63, 72, 266, 1354
PdmI GAANNNNTTC 2 cut(s) 1667, 2058
PfeI GAWTC 7 cut(s) 577, 976, 1170, 1528, 1595, 2165, 2381
PflFI GACNNNGTC 1 cut(s) 547
PleI GAGTC 3 cut(s) 1017, 1724, 1888
PpsI GAGTC 3 cut(s) 1017, 1724, 1888
PpuMI RGGWCCY 1 cut(s) 2182
PsiI TTATAA 1 cut(s) 902
Psp124BI GAGCTC 1 cut(s) 266
Psp5II RGGWCCY 1 cut(s) 2182
Psp6I CCWGG 1 cut(s) 453
PspEI GGTNACC 1 cut(s) 1121
PspGI CCWGG 1 cut(s) 453
PspN4I GGNNCC 4 cut(s) 73, 218, 2183, 2184
PspPI GGNCC 6 cut(s) 523, 707, 1099, 1930, 2182, 2401
PspPPI RGGWCCY 1 cut(s) 2182
PstI CTGCAG 1 cut(s) 2444
PsuI RGATCY 2 cut(s) 1428, 2200
PsyI GACNNNGTC 1 cut(s) 547
PvuII CAGCTG 1 cut(s) 2445
RsaI GTAC 4 cut(s) 345, 1421, 1520, 2357
RsaNI GTAC 4 cut(s) 344, 1420, 1519, 2356
RseI CAYNNNNRTG 1 cut(s) 2127
SacI GAGCTC 1 cut(s) 266
SalI GTCGAC 1 cut(s) 666
Sau96I GGNCC 6 cut(s) 523, 707, 1099, 1930, 2182, 2401
ScaI AGTACT 1 cut(s) 345
SchI GAGTC 3 cut(s) 1018, 1724, 1889
ScrFI CCNGG 3 cut(s) 442, 455, 1854
SduI GDGCHC 5 cut(s) 266, 275, 488, 1542, 1583
SfaNI GCATC 3 cut(s) 297, 1012, 1150
SfcI CTRYAG 1 cut(s) 2440
SinI GGWCC 4 cut(s) 707, 1930, 2182, 2401
SmiMI CAYNNNNRTG 1 cut(s) 2127
SmlI CTYRAG 6 cut(s) 152, 221, 292, 1127, 1484, 1740
SmoI CTYRAG 6 cut(s) 152, 221, 292, 1127, 1484, 1740
SphI GCATGC 2 cut(s) 1382, 2148
SsiI CCGC 6 cut(s) 36, 91, 359, 918, 1029, 2000
SspI AATATT 1 cut(s) 2213
SspMI CTAG 6 cut(s) 236, 347, 602, 1157, 1815, 2319
SstI GAGCTC 1 cut(s) 266
StyD4I CCNGG 3 cut(s) 440, 453, 1852
StyI CCWWGG 1 cut(s) 1444
TaaI ACNGT 9 cut(s) 76, 549, 629, 988, 1510, 1523, 1934, 2316, 2405
TaiI ACGT 1 cut(s) 2267
TatI WGTACW 2 cut(s) 343, 2355
TauI GCSGC 2 cut(s) 361, 1031
TfiI GAWTC 7 cut(s) 577, 976, 1170, 1528, 1595, 2165, 2381
TscAI CASTG 4 cut(s) 488, 634, 1588, 2319
TseFI GTSAC 4 cut(s) 172, 541, 1121, 1686
Tsp45I GTSAC 4 cut(s) 172, 541, 1121, 1686
TspGWI ACGGA 1 cut(s) 121
TspRI CASTG 4 cut(s) 488, 634, 1588, 2319
Tth111I GACNNNGTC 1 cut(s) 547
VneI GTGCAC 1 cut(s) 1579
VpaK11BI GGWCC 4 cut(s) 707, 1930, 2182, 2401
XapI RAATTY 3 cut(s) 737, 1892, 2045
XbaI TCTAGA 2 cut(s) 1156, 2318
XceI RCATGY 4 cut(s) 874, 1382, 2116, 2148
XmiI GTMKAC 2 cut(s) 667, 1712
XmnI GAANNNNTTC 2 cut(s) 1667, 2058
XspI CTAG 6 cut(s) 236, 347, 602, 1157, 1815, 2319
ZrmI AGTACT 1 cut(s) 345
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.