Rorug02G0453700

Vacuolar protein-sorting-associated protein 11 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0012419
Physical Location & Seq
Forward (+)
58326109 .. 58329876
3768 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0453700.1

Sequence Viewer

Length: 1278 bp
ATGGCGCCAGAACCCGAAGATATCAAGGACGAGAAGAACCCTAGACCCCTCGATGAGGACGACATCGCCCTCCTCAAGACCTATGGATTAGGGCCTTACTCTACTCATATTAAGAAGGCTGAGAAGGAAATTAAGGAGATGGCTAAAAAAGTCAATGATTTATGTGGTATTAAGGAGTCTGACACTGGTCTAGCTGCTCCCAGCCAGTGGGATCTTGTTTCGGATAAGCAGATGATGCAGGAGGAGCAACCTCTGCAGGTTGCGAGGTGCACCAAGATTATCAGTCCCAATTCTGAAGATGCTAAATACGTCATCAACGTTAAGCAAATTGCAAAGTTTGTAGTCGGCCTGGGTGACAAGGTTTCCCCAACAGATATAGAAGAAGGCATGCGTGTCGGGGTTGATCGAAACAAATATCAGATTCAGATTCCTTTGCCTCCAAAAATTGATCCAAGTGTGACCATGATGACGGTGGAAGAGAAGCCAGATGTGACGTATAACGATGTCGGTGGATGTAAGGAGCAGATTGAGAAGATGCGAGAAGTTGTTGAGCTACCCATGCTTCACCCTGAGAAATTTGTGAAGCTTGGAATTGATCCTCCTAAGGGTGTTCTCTGTTATGGTCCTCCAGGGACTGGTAAAACACTTCTAGCTAGAGCTGTGGCTAACAGAACTGATGCTTGTTTCATTCGTGTTATTGGGAGTGAACTTGTTCAGAAGTATGTTGGTGAGGGGGCTAGGATGGTGCGAGAGCTATTTCAGATGGCGCGCTCAAAAAAGGCGTGTATTGTGTTTTTTGATGAAGTTGATGCCATAGGAGGGGCTAGATTTGATGATGGTGTGGGTGGAGACAATGAGGTCCAGCGCACTATGCTTGAAATCGTGAATCAGCTAGATGGTTTTGATGCGCGTGGAAACATCAAAGTCTTGATGGCAACAAACAGGCCTGACACACTAGACCCAGCATTGTTACGTCCTGGACGATTGGATCGTAAGGTTGAGTTTGGCCTCCCAGATATGGAGAGCAGGACGCAGATATTTAAGATCCATACACGAACAATGAATTGTGAAAGAGATGTTAGGTTTGAACTTCTCGCTCGGCTGTGCCCAAATTCAACTGGAGCTGATATAAGAAGTGTATGCACAGAAGCCGGAATGTATGCCATTCGTGCACGAAGGAAGACAGTAACCGAAAAGGACTTCCTTGATGCTGTGAATAAGGTCATTAAGGGTTACCAGAAGTTCAGCGCTACTCCCAAATACATGGTTTACAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000323 GO:0000325 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005768 GO:0005769 GO:0005770 GO:0005773 GO:0005774 GO:0005856 GO:0005884 GO:0006810 GO:0006887 GO:0006904 GO:0006906 GO:0006996 GO:0007032 GO:0007033 GO:0007034 GO:0007040 GO:0007041 GO:0008150 GO:0008333 GO:0009705 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010256 GO:0010604 GO:0012505 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0019222 GO:0019904 GO:0019905 GO:0022406 GO:0030139 GO:0030674 GO:0030897 GO:0031090 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031338 GO:0031410 GO:0031982 GO:0032268 GO:0032270 GO:0032386 GO:0032388 GO:0032879 GO:0032940 GO:0032991 GO:0033043 GO:0033263 GO:0034058 GO:0035542 GO:0042144 GO:0042176 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043254 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0046903 GO:0046907 GO:0048278 GO:0048284 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051049 GO:0051050 GO:0051128 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051640 GO:0051641 GO:0051649 GO:0060090 GO:0060255 GO:0060341 GO:0060627 GO:0061024 GO:0061025 GO:0065007 GO:0071840 GO:0080090 GO:0080171 GO:0090174 GO:0097576 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0099023 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140029 GO:0140056 GO:1901998 GO:1902115 GO:1903362 GO:1903364 GO:1903649 GO:1903651 GO:2000641 GO:2000643
KEGG Pathways
Metabolic & Signaling
ko04138 map04138
Pfam Domains
Protein Families
Clathrin VPS11_C zf-C3H2C3

Protein Analysis

425

Amino Acids

47.58

Weight (kDa)

6.43

Isoelectric Point (pI)

36.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OB_PRS7 PF21236 78 - 146 4.4e-39 26S proteasome regulatory subunit 7, OB domain
AAA PF00004 204 - 337 2.4e-40 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 359 - 402 1.9e-12 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012419)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05170
fragaria_vesca FvH4_6g40910 FvH4_6g40910
malus_domestica MD09G1123500.v1.1 MD17G1113900.v1.1
prunus_persica Prupe.3G200600_v2.0.a1
pyrus_communis pycom09g04750 pycom17g10560
rosa_chinensis RchiOBHm_Chr2g0156491
rosa_laevigata RLG00000020917
rosa_multiflora Rmu_co8501807.1_g000001 Rmu_sc0005392.1_g000009
rosa_roxburghii Rroxscaffold_2G00092980
rosa_rugosa Rorug02G0453700
rosa_samantha Rh2AG519800 Rh2BG532100 Rh2CG504800 Rh2DG541100
rosa_wichuraiana Rw2G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 857
Acc36I ACCTGC 1 cut(s) 247
AccB1I GGYRCC 1 cut(s) 4
AccB7I CCANNNNNTGG 2 cut(s) 207, 635
AccII CGCG 2 cut(s) 769, 910
AclI AACGTT 1 cut(s) 318
AclWI GGATC 5 cut(s) 219, 443, 590, 996, 1039
AcsI RAATTY 2 cut(s) 575, 1111
AcuI CTGAAG 1 cut(s) 315
AcyI GRCGYC 1 cut(s) 5
AfeI AGCGCT 1 cut(s) 1249
AfiI CCNNNNNNNGG 6 cut(s) 55, 207, 605, 635, 819, 1018
AgsI TTSAA 3 cut(s) 878, 1088, 1116
AjnI CCWGG 3 cut(s) 348, 628, 976
AluBI AGCT 8 cut(s) 194, 553, 586, 653, 659, 754, 892, 1124
AluI AGCT 8 cut(s) 194, 553, 586, 653, 659, 754, 892, 1124
Alw21I GWGCWC 2 cut(s) 272, 1174
Alw26I GTCTC 1 cut(s) 843
Alw44I GTGCAC 2 cut(s) 268, 1170
AlwI GGATC 5 cut(s) 219, 443, 590, 996, 1039
AlwNI CAGNNNCTG 1 cut(s) 635
Aor51HI AGCGCT 1 cut(s) 1249
AoxI GGCC 4 cut(s) 92, 346, 944, 1006
ApaLI GTGCAC 2 cut(s) 268, 1170
ApeKI GCWGC 1 cut(s) 194
ApoI RAATTY 2 cut(s) 575, 1111
Asp700I GAANNNNTTC 1 cut(s) 711
AspLEI GCGC 6 cut(s) 7, 769, 771, 867, 910, 1250
AspS9I GGNCC 3 cut(s) 92, 623, 859
AsuHPI GGTGA 3 cut(s) 365, 557, 740
AvaII GGWCC 2 cut(s) 623, 859
AxyI CCTNAGG 1 cut(s) 603
BaeGI GKGCMC 3 cut(s) 272, 1109, 1174
BanI GGYRCC 1 cut(s) 4
BbsI GAAGAC 1 cut(s) 1187
Bbv12I GWGCWC 2 cut(s) 272, 1174
BbvI GCAGC 1 cut(s) 181
BccI CCATC 6 cut(s) 133, 736, 757, 830, 890, 925
BcgI CGANNNNNNTGC 2 cut(s) 376, 410
BciT130I CCWGG 3 cut(s) 350, 630, 978
BcoDI GTCTC 1 cut(s) 843
BfaI CTAG 8 cut(s) 42, 191, 650, 654, 738, 825, 893, 956
BfmI CTRYAG 1 cut(s) 254
BfoI RGCGCY 2 cut(s) 8, 1251
BfuAI ACCTGC 1 cut(s) 247
BisI GCNGC 1 cut(s) 195
BlsI GCNGC 1 cut(s) 196
Bme1390I CCNGG 3 cut(s) 350, 630, 978
Bme18I GGWCC 2 cut(s) 623, 859
BmgT120I GGNCC 3 cut(s) 92, 623, 859
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 3 cut(s) 350, 630, 978
BmsI GCATC 7 cut(s) 225, 289, 525, 667, 799, 895, 1198
BoxI GACNNNNGTC 1 cut(s) 186
BpiI GAAGAC 1 cut(s) 1187
BpmI CTGGAG 2 cut(s) 612, 1140
BpuEI CTTGAG 1 cut(s) 59
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 2 cut(s) 349, 629
Bsc4I CCNNNNNNNGG 6 cut(s) 55, 207, 605, 635, 819, 1018
Bse1I ACTGG 4 cut(s) 190, 205, 640, 1123
Bse21I CCTNAGG 1 cut(s) 603
BseBI CCWGG 3 cut(s) 350, 630, 978
BseDI CCNNGG 2 cut(s) 349, 629
BseGI GGATG 2 cut(s) 518, 747
BseLI CCNNNNNNNGG 6 cut(s) 55, 207, 605, 635, 819, 1018
BseMII CTCAG 2 cut(s) 111, 561
BseNI ACTGG 4 cut(s) 190, 205, 640, 1123
BsePI GCGCGC 1 cut(s) 767
BseRI GAGGAG 2 cut(s) 62, 257
BseSI GKGCMC 3 cut(s) 272, 1109, 1174
BseXI GCAGC 1 cut(s) 181
BseYI CCCAGC 2 cut(s) 200, 961
Bsh1236I CGCG 2 cut(s) 769, 910
BshFI GGCC 4 cut(s) 94, 348, 946, 1008
BshNI GGYRCC 1 cut(s) 4
BsiHKAI GWGCWC 2 cut(s) 272, 1174
BsiSI CCGG 1 cut(s) 1152
BslFI GGGAC 2 cut(s) 270, 646
BslI CCNNNNNNNGG 6 cut(s) 55, 207, 605, 635, 819, 1018
BsmAI GTCTC 1 cut(s) 843
BsmFI GGGAC 2 cut(s) 270, 646
BsnI GGCC 4 cut(s) 94, 348, 946, 1008
Bsp1286I GDGCHC 3 cut(s) 272, 1109, 1174
Bsp143I GATC 6 cut(s) 211, 403, 448, 595, 988, 1044
BspANI GGCC 4 cut(s) 94, 348, 946, 1008
BspCNI CTCAG 2 cut(s) 112, 562
BspFNI CGCG 2 cut(s) 769, 910
BspLI GGNNCC 1 cut(s) 6
BspMAI CTGCAG 1 cut(s) 258
BspMI ACCTGC 1 cut(s) 247
BspPI GGATC 5 cut(s) 219, 443, 590, 996, 1039
BspT107I GGYRCC 1 cut(s) 4
BsrI ACTGG 4 cut(s) 190, 205, 640, 1123
BssECI CCNNGG 2 cut(s) 349, 629
BssHII GCGCGC 1 cut(s) 767
BssMI GATC 6 cut(s) 211, 403, 448, 595, 988, 1044
BssNI GRCGYC 1 cut(s) 5
Bst2UI CCWGG 3 cut(s) 350, 630, 978
Bst4CI ACNGT 2 cut(s) 472, 1186
Bst6I CTCTTC 1 cut(s) 471
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 2 cut(s) 235, 253
BstC8I GCNNGC 2 cut(s) 389, 769
BstDEI CTNAG 3 cut(s) 120, 570, 603
BstEII GGTNACC 1 cut(s) 1232
BstENI CCTNNNNNAGG 1 cut(s) 53
BstF5I GGATG 2 cut(s) 518, 747
BstFNI CGCG 2 cut(s) 769, 910
BstH2I RGCGCY 2 cut(s) 8, 1251
BstHHI GCGC 6 cut(s) 7, 769, 771, 867, 910, 1250
BstKTI GATC 6 cut(s) 214, 406, 451, 598, 991, 1047
BstMAI GTCTC 1 cut(s) 843
BstMBI GATC 6 cut(s) 211, 403, 448, 595, 988, 1044
BstMWI GCNNNNNNNGC 6 cut(s) 235, 244, 253, 559, 871, 1169
BstNI CCWGG 3 cut(s) 350, 630, 978
BstNSI RCATGY 1 cut(s) 391
BstPAI GACNNNNGTC 1 cut(s) 186
BstPI GGTNACC 1 cut(s) 1232
BstSCI CCNGG 3 cut(s) 348, 628, 976
BstSFI CTRYAG 1 cut(s) 254
BstSLI GKGCMC 3 cut(s) 272, 1109, 1174
BstUI CGCG 2 cut(s) 769, 910
BstV1I GCAGC 1 cut(s) 181
BstV2I GAAGAC 1 cut(s) 1187
BstX2I RGATCY 2 cut(s) 211, 1044
BstXI CCANNNNNNTGG 1 cut(s) 1264
BstYI RGATCY 2 cut(s) 211, 1044
Bsu36I CCTNAGG 1 cut(s) 603
BsuRI GGCC 4 cut(s) 94, 348, 946, 1008
BtgZI GCGATG 1 cut(s) 49
BtsCI GGATG 2 cut(s) 518, 747
BtsIMutI CAGTG 2 cut(s) 183, 212
BveI ACCTGC 1 cut(s) 247
Cac8I GCNNGC 2 cut(s) 389, 769
CaiI CAGNNNCTG 1 cut(s) 635
CfoI GCGC 6 cut(s) 7, 769, 771, 867, 910, 1250
Cfr13I GGNCC 3 cut(s) 92, 623, 859
CseI GACGC 1 cut(s) 1039
CviAII CATG 4 cut(s) 388, 463, 559, 1264
DdeI CTNAG 3 cut(s) 120, 570, 603
DinI GGCGCC 1 cut(s) 6
DpnI GATC 6 cut(s) 213, 405, 450, 597, 990, 1046
DpnII GATC 6 cut(s) 211, 403, 448, 595, 988, 1044
DrdI GACNNNNNNGTC 1 cut(s) 857
DseDI GACNNNNNNGTC 1 cut(s) 857
Eam1104I CTCTTC 1 cut(s) 471
EarI CTCTTC 1 cut(s) 471
Eco147I AGGCCT 1 cut(s) 946
Eco32I GATATC 1 cut(s) 22
Eco47I GGWCC 2 cut(s) 623, 859
Eco47III AGCGCT 1 cut(s) 1249
Eco57I CTGAAG 1 cut(s) 315
Eco81I CCTNAGG 1 cut(s) 603
Eco91I GGTNACC 1 cut(s) 1232
EcoNI CCTNNNNNAGG 1 cut(s) 53
EcoO109I RGGNCCY 1 cut(s) 92
EcoO65I GGTNACC 1 cut(s) 1232
EcoRII CCWGG 3 cut(s) 348, 628, 976
EcoRV GATATC 1 cut(s) 22
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
FaeI CATG 4 cut(s) 391, 466, 562, 1267
FaqI GGGAC 2 cut(s) 270, 646
FatI CATG 4 cut(s) 387, 462, 558, 1263
Fnu4HI GCNGC 1 cut(s) 195
FokI GGATG 2 cut(s) 525, 754
Fsp4HI GCNGC 1 cut(s) 195
FspBI CTAG 8 cut(s) 42, 191, 650, 654, 738, 825, 893, 956
GlaI GCGC 6 cut(s) 6, 768, 770, 866, 909, 1249
GluI GCNGC 1 cut(s) 195
GsaI CCCAGC 2 cut(s) 204, 965
GsuI CTGGAG 2 cut(s) 612, 1140
HaeII RGCGCY 2 cut(s) 8, 1251
HaeIII GGCC 4 cut(s) 94, 348, 946, 1008
HapII CCGG 1 cut(s) 1152
HgaI GACGC 1 cut(s) 1039
HhaI GCGC 6 cut(s) 7, 769, 771, 867, 910, 1250
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 4 cut(s) 391, 466, 562, 1267
Hin6I GCGC 6 cut(s) 5, 767, 769, 865, 908, 1248
HinP1I GCGC 6 cut(s) 5, 767, 769, 865, 908, 1248
HindIII AAGCTT 1 cut(s) 584
HinfI GANTC 4 cut(s) 176, 421, 427, 886
HpaII CCGG 1 cut(s) 1152
HphI GGTGA 3 cut(s) 365, 557, 740
Hpy166II GTNNAC 4 cut(s) 270, 707, 1172, 1270
Hpy188I TCNGA 7 cut(s) 181, 223, 295, 420, 426, 717, 762
Hpy188III TCNNGA 3 cut(s) 76, 883, 928
Hpy8I GTNNAC 4 cut(s) 270, 707, 1172, 1270
HpyAV CCTTC 4 cut(s) 109, 118, 377, 1170
HpyCH4III ACNGT 2 cut(s) 472, 1186
HpyCH4IV ACGT 4 cut(s) 309, 318, 494, 973
HpyCH4V TGCA 6 cut(s) 238, 256, 270, 332, 1143, 1172
HpyF10VI GCNNNNNNNGC 6 cut(s) 235, 244, 253, 559, 871, 1169
HpyF3I CTNAG 3 cut(s) 120, 570, 603
HpySE526I ACGT 4 cut(s) 309, 318, 494, 973
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 4 cut(s) 391, 466, 562, 1267
HspAI GCGC 6 cut(s) 5, 767, 769, 865, 908, 1248
KasI GGCGCC 1 cut(s) 4
Kzo9I GATC 6 cut(s) 211, 403, 448, 595, 988, 1044
LmnI GCTCC 4 cut(s) 202, 244, 520, 1121
Lsp1109I GCAGC 1 cut(s) 181
LweI GCATC 7 cut(s) 225, 289, 525, 667, 799, 895, 1198
MaeI CTAG 8 cut(s) 42, 191, 650, 654, 738, 825, 893, 956
MaeII ACGT 4 cut(s) 309, 318, 494, 973
MaeIII GTNAC 6 cut(s) 353, 457, 490, 969, 1186, 1232
MalI GATC 6 cut(s) 213, 405, 450, 597, 990, 1046
MboI GATC 6 cut(s) 211, 403, 448, 595, 988, 1044
MboII GAAGA 7 cut(s) 29, 46, 308, 392, 488, 544, 1192
MflI RGATCY 2 cut(s) 211, 1044
MhlI GDGCHC 3 cut(s) 272, 1109, 1174
MluCI AATT 8 cut(s) 129, 289, 327, 444, 575, 591, 1063, 1111
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 185
MroXI GAANNNNTTC 1 cut(s) 711
MseI TTAA 6 cut(s) 111, 132, 171, 321, 1041, 1227
MspI CCGG 1 cut(s) 1152
MspR9I CCNGG 3 cut(s) 350, 630, 978
MvaI CCWGG 3 cut(s) 350, 630, 978
MvnI CGCG 2 cut(s) 769, 910
MwoI GCNNNNNNNGC 6 cut(s) 235, 244, 253, 559, 871, 1169
NarI GGCGCC 1 cut(s) 5
NdeII GATC 6 cut(s) 211, 403, 448, 595, 988, 1044
NlaIII CATG 4 cut(s) 391, 466, 562, 1267
NlaIV GGNNCC 1 cut(s) 6
NmeAIII GCCGAG 1 cut(s) 1078
NmuCI GTSAC 3 cut(s) 353, 457, 490
NspI RCATGY 1 cut(s) 391
PaeI GCATGC 1 cut(s) 391
PauI GCGCGC 1 cut(s) 767
PceI AGGCCT 1 cut(s) 946
PcsI WCGNNNNNNNCGW 4 cut(s) 57, 315, 979, 988
PdmI GAANNNNTTC 1 cut(s) 711
PfeI GAWTC 3 cut(s) 421, 427, 886
PflMI CCANNNNNTGG 2 cut(s) 207, 635
PfoI TCCNGGA 1 cut(s) 976
PkrI GCNGC 1 cut(s) 196
PleI GAGTC 1 cut(s) 184
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 184
PshAI GACNNNNGTC 1 cut(s) 186
Psp1406I AACGTT 1 cut(s) 318
Psp6I CCWGG 3 cut(s) 348, 628, 976
PspEI GGTNACC 1 cut(s) 1232
PspFI CCCAGC 2 cut(s) 200, 961
PspGI CCWGG 3 cut(s) 348, 628, 976
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 3 cut(s) 92, 623, 859
PstI CTGCAG 1 cut(s) 258
PstNI CAGNNNCTG 1 cut(s) 635
PsuI RGATCY 2 cut(s) 211, 1044
PteI GCGCGC 1 cut(s) 767
SaqAI TTAA 6 cut(s) 111, 132, 171, 321, 1041, 1227
SatI GCNGC 1 cut(s) 195
Sau3AI GATC 6 cut(s) 211, 403, 448, 595, 988, 1044
Sau96I GGNCC 3 cut(s) 92, 623, 859
SchI GAGTC 1 cut(s) 185
ScrFI CCNGG 3 cut(s) 350, 630, 978
SduI GDGCHC 3 cut(s) 272, 1109, 1174
SfaNI GCATC 7 cut(s) 225, 289, 525, 667, 799, 895, 1198
SfcI CTRYAG 1 cut(s) 254
SfoI GGCGCC 1 cut(s) 6
SinI GGWCC 2 cut(s) 623, 859
SmlI CTYRAG 1 cut(s) 74
SmoI CTYRAG 1 cut(s) 74
SphI GCATGC 1 cut(s) 391
Sse9I AATT 8 cut(s) 129, 289, 327, 444, 575, 591, 1063, 1111
SseBI AGGCCT 1 cut(s) 946
SspDI GGCGCC 1 cut(s) 4
SspMI CTAG 8 cut(s) 42, 191, 650, 654, 738, 825, 893, 956
StuI AGGCCT 1 cut(s) 946
StyD4I CCNGG 3 cut(s) 348, 628, 976
TaaI ACNGT 2 cut(s) 472, 1186
TaiI ACGT 4 cut(s) 312, 321, 497, 976
TaqI TCGA 2 cut(s) 51, 406
TasI AATT 8 cut(s) 129, 289, 327, 444, 575, 591, 1063, 1111
TfiI GAWTC 3 cut(s) 421, 427, 886
Tru1I TTAA 6 cut(s) 111, 132, 171, 321, 1041, 1227
Tru9I TTAA 6 cut(s) 111, 132, 171, 321, 1041, 1227
TscAI CASTG 2 cut(s) 190, 212
TseFI GTSAC 3 cut(s) 353, 457, 490
TseI GCWGC 1 cut(s) 194
Tsp45I GTSAC 3 cut(s) 353, 457, 490
TspDTI ATGAA 3 cut(s) 676, 816, 1076
TspRI CASTG 2 cut(s) 190, 212
Van91I CCANNNNNTGG 2 cut(s) 207, 635
VneI GTGCAC 2 cut(s) 268, 1170
VpaK11BI GGWCC 2 cut(s) 623, 859
XagI CCTNNNNNAGG 1 cut(s) 53
XapI RAATTY 2 cut(s) 575, 1111
XceI RCATGY 1 cut(s) 391
XcmI CCANNNNNNNNNTGG 1 cut(s) 469
XmnI GAANNNNTTC 1 cut(s) 711
XspI CTAG 8 cut(s) 42, 191, 650, 654, 738, 825, 893, 956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.