pycom17g10740

Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0013571
Physical Location & Seq
Reverse (-)
8324963 .. 8329177
4215 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2634 bp
ATGTCGTCGCTGTCTTTGAACAAAATGAATAGTTCTAGAAGCAGCACTGTATCTGAACGGTGTTTTGATCACTATGTTTCGGTTGACTGCAATATCTCATCTTCCACTAACAATGTCCCCTCCAGCACTGTATCTGCTTATCTCCGAAATATGCAGCGAGGAAGCCTTATTCAACCATTTGGTTGCTTGATTGCTGTTGATGAGAAAAGCTTCACTGTTCTTGCCTACAGTGTAAATGCCCCGGAAATGTTGGACTTGGCCCCTCATGCTGTTCCAAATATTGAGCAGCAAGAAGCTTTGACTTTTGGAGCGGATGTGCAGACACTCTTTCGGTCCTCAGTCACTGCGGGAGCATTGAAATCTTATAAGCTTGCTGCCCAAGCCATCTTAAAATTGCAGTCTTTGAAGAGTGATTTGACGGGTTATGATCGCATCACGGTGTATAAATTACACGGCGGTGAACACGGGGAAGTTATCTCTGAGTACCATAGACCTAACCTGGAACCTTATCTGGGTTTACATTTCCCAGCCACTGATATACCACAGGCTTCCCGATTCTTATTTATGAGGAATAAGGTTAGGATGATATGTGATTGTTTAGCCGCTCCAGTTAAACTCCTCATGGTTGTCATGCACAGTATATGGAAATTGGAAAGTATGGGTTCCATTGCATCTCTTGTGATGTCTGTTACAATCAACGACAATGTTGATGAGATGGACAGTGATCAGCGGAAGGGAAGAAAATTATGGGTCTTAGTGGTTTGCCATCAGACAAGCTCTAGATTTGTTCCATTCCCTTTGAGATATGGCTGTGAGTTCTTGATACAAGTTTTTGGCGTACAGATCAGCAAAGAAGTAGAGCTGGCTGCTCAGGATCCCCCTGTAGGGATTGTTACCCAATCGCCTAATGCGATGGATCATGTTAAGTGTGATGGAGCTGCATTGTATTACAGGAAGAAATTATGGTTACTTGGGTTTACCCTGACAGAGGCACAAATTGAGCATATTGCTGGATGGCTTCTCAAGTACCATAATGGGAGCACAGGCTTAAGTGCTTCAGCTCTTGGCGATGAAGTTTGGGGAATGGCTGCCATTAAGATTACCTCAAAGGATTTTCTGTTTTGGTTTCGGTCCCACACCGCAAAGGAAATCAAATGGGGTGGATTAAAACATGATCCTGATGACAAGGATGATGGAAGAAAAATGCATCCAAGGTCATCACTCAATGCTTTTCTGGAGGTGCTGATACTGAGAGGATCATTACCAGACGAGCCTGTGGATGATTCCAAAGTGATTGTGAAGGCTCCATCAGTTGATGATAGGATACAGAGAACAGCTGTAGTTCCCATTTTTCCTGTTGATGTCTCTGGTACTATAAATGGGTGGAATACGAAAGCATCTGAACAAACAGGATTAGCTGTTGAGCAAGCTATTGGTATGCCATTGGTTGATATTGTTGGAGATGATTCTATTGAGTGGCGAAGGACATGCTCTCATTTGCATTGCAAGAAGAAAAATATTGAAATCAAACTGAAAACATTTGGTCAGCAAGAAAATAACAGTTTTGTAACCTTGGTGGTTGATTCGTGTTGTAGCCAAGAAATCAAGGAAGATGTAGTTGGGGTTTGCTTTGTAAGCGAAGATCTTACCATGGAAAAATTGGGTATGGACAAATATACCCGTTTGCTAGTGATTATGTTGGAATTGTTCGGAGGAAAGCAGTTGATCAGATCGATCATTGGGGAAGTTATCACTGTGAAAAATTTTGGTTGTCGTGTTAAAGGTCATGATACATTAACCAAGCTTAATATTCTACTAAATGGGGATAATTATGTCGAAGCATTACTTTCTGCCAACAAACGAATTGATGCAGTGGGAAGGATAACTGGGGTTTTGTGCTTTTTACATGTGACTAGTCCAGAACTTATGTATGCTATGCAGATGCAGAGAGCATCAAAGCAGGTTGCAGCTGATAGTATTAAGAAACTGGCGTACGTTCGTCAAGAAATCAAAAGGCCTCTAAGTGGGATTATGCTTATGCATAATCTGATGGGGTCTTCTGACTTAAAGGAGGAGCAGAAGCAGTTACTTAAGAAGAGAAGATTGTGTCAGGACCAATTGGCCAAGATTGTTGATGACACTGATCTCGAAGGTATTGAGGAATGCTACATGGAAATAAATTCTAGTGAGTTTAACCTCGGGGAAACTGTGGAGGTTGTCATAAATCAAGTTATGATTTTGAGTGAGGTGTCATCCATGCTCTTGTACGGGGACAATTTGAGGCTACAAGTAGTCTTGTCCGATTTCTTGACGAACGCACTCCTTTTCACCCCTGCATCCGAAGGATCGTCCATTGTGTTCAGAGTGACTCCAAAGAAGGAACGTATAGGCATGAAAATGTACATTGTTCATCTTGAGTTTCGTATCACTCACCCAGCACCCGGAATTCTAGACAGGCTAATTCAAGAGAAGTTTCACAGTAGCCATCGCGTCTCAAAGGAAGGGCTAGGCCTACAAATGAACCAAAATTTGGTGAAGATCATGAACGGCACTGTACGGTATCAGAGAGAAGCAGAGAAGGCATCCTTTATAATACTCATGGAATTTCCAATGGTTCACCTGATCGGCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
GAF HATPase_c HisKA PAS PAS_2 PHY

Protein Analysis

878

Amino Acids

98.13

Weight (kDa)

6.93

Isoelectric Point (pI)

44.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS_2 PF08446 46 - 116 1.5e-16 PAS fold
PHY PF00360 290 - 418 4.3e-28 Phytochrome region
PAS PF00989 440 - 548 7e-10 PAS fold
HisKA PF00512 663 - 720 5.7e-08 His Kinase A (phospho-acceptor) domain
HATPase_c PF02518 757 - 869 1.4e-08 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013571)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G35840
fragaria_vesca FvH4_6g40650 FvH4_6g40650 FvH4_6g40650
malus_domestica MD09G1126400.v1.1
prunus_persica Prupe.3G198200_v2.0.a1 Prupe.3G198200_v2.0.a1
pyrus_communis pycom09g05070 pycom17g10740
rosa_chinensis RchiOBHm_Chr2g0156021
rosa_laevigata RLG00000020882
rosa_multiflora Rmu_sc0011922.1_g000002
rosa_rugosa Rorug02G0451300
rosa_samantha Rh2AG518100 Rh2BG529300 Rh2CG502800 Rh2DG538400
rosa_wichuraiana Rw2G042660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 366, 2591
Acc36I ACCTGC 1 cut(s) 1951
AccB7I CCANNNNNTGG 1 cut(s) 2530
AccBSI CCGCTC 2 cut(s) 311, 605
AccII CGCG 1 cut(s) 2490
AciI CCGC 6 cut(s) 311, 347, 456, 603, 730, 1140
AclWI GGATC 6 cut(s) 869, 882, 924, 1169, 1264, 2353
AcoI YGGCCR 1 cut(s) 2121
AcsI RAATTY 5 cut(s) 1762, 2179, 2445, 2527, 2603
AcuI CTGAAG 1 cut(s) 1041
AfaI GTAC 8 cut(s) 485, 840, 1028, 1372, 1994, 2267, 2402, 2556
AfiI CCNNNNNNNGG 7 cut(s) 512, 884, 885, 988, 2024, 2441, 2530
AflII CTTAAG 2 cut(s) 1048, 2090
AflIII ACRYGT 1 cut(s) 1906
AgsI TTSAA 6 cut(s) 19, 173, 358, 406, 1523, 2465
AhlI ACTAGT 1 cut(s) 1913
AjnI CCWGG 1 cut(s) 498
AjuI GAANNNNNNNTTGG 4 cut(s) 1602, 1634, 2513, 2545
AleI CACNNNNGTG 1 cut(s) 456
Alw21I GWGCWC 1 cut(s) 1043
Alw26I GTCTC 2 cut(s) 1369, 2497
AlwI GGATC 6 cut(s) 869, 882, 924, 1169, 1264, 2353
AlwNI CAGNNNCTG 2 cut(s) 344, 533
Ama87I CYCGRG 1 cut(s) 2198
AoxI GGCC 4 cut(s) 258, 2015, 2121, 2509
ApeKI GCWGC 8 cut(s) 42, 154, 286, 374, 866, 938, 1088, 1967
ApoI RAATTY 5 cut(s) 1762, 2179, 2445, 2527, 2603
Asp700I GAANNNNTTC 1 cut(s) 209
AspS9I GGNCC 4 cut(s) 259, 333, 1131, 2113
AsuC2I CCSGG 2 cut(s) 242, 2442
AsuHPI GGTGA 5 cut(s) 470, 2320, 2423, 2545, 2609
AvaI CYCGRG 1 cut(s) 2198
AvaII GGWCC 3 cut(s) 333, 1131, 2113
BalI TGGCCA 1 cut(s) 2123
BamHI GGATCC 1 cut(s) 874
BbsI GAAGAC 1 cut(s) 2049
Bbv12I GWGCWC 1 cut(s) 1043
BbvI GCAGC 8 cut(s) 54, 166, 298, 361, 853, 925, 1075, 1979
BceAI ACGGC 2 cut(s) 469, 2563
BcgI CGANNNNNNTGC 2 cut(s) 1470, 1504
BciT130I CCWGG 1 cut(s) 500
BciVI GTATCC 1 cut(s) 1317
BclI TGATCA 3 cut(s) 67, 724, 1725
BcnI CCSGG 2 cut(s) 242, 2442
BcoDI GTCTC 2 cut(s) 1369, 2497
BcuI ACTAGT 1 cut(s) 1913
BfaI CTAG 7 cut(s) 36, 780, 1688, 1914, 2184, 2450, 2507
BfmI CTRYAG 3 cut(s) 226, 882, 1338
BfrI CTTAAG 2 cut(s) 1048, 2090
BfuAI ACCTGC 1 cut(s) 1951
BfuI GTATCC 1 cut(s) 1317
BglII AGATCT 1 cut(s) 1642
BisI GCNGC 9 cut(s) 43, 155, 287, 375, 603, 867, 939, 1089, 1968
BlsI GCNGC 9 cut(s) 44, 156, 288, 376, 604, 868, 940, 1090, 1969
Bme1390I CCNGG 3 cut(s) 242, 500, 2442
Bme18I GGWCC 3 cut(s) 333, 1131, 2113
BmeT110I CYCGRG 1 cut(s) 2198
BmgT120I GGNCC 4 cut(s) 259, 333, 1131, 2113
BmiI GGNNCC 6 cut(s) 261, 504, 664, 876, 1133, 1305
BmrFI CCNGG 3 cut(s) 242, 500, 2442
BmrI ACTGGG 1 cut(s) 1896
BmsI GCATC 9 cut(s) 441, 680, 1216, 1406, 1858, 1932, 1961, 2345, 2591
BmuI ACTGGG 1 cut(s) 1896
BpiI GAAGAC 1 cut(s) 2049
BpmI CTGGAG 3 cut(s) 106, 591, 1256
Bpu10I CCTNAGC 1 cut(s) 870
BpuEI CTTGAG 2 cut(s) 1007, 2435
BpuMI CCSGG 2 cut(s) 242, 2442
Bsa29I ATCGAT 1 cut(s) 1733
BsaJI CCNNGG 5 cut(s) 240, 1211, 1572, 1650, 2197
BsaXI ACNNNNNCTCC 2 cut(s) 300, 330
Bsc4I CCNNNNNNNGG 7 cut(s) 512, 884, 885, 988, 2024, 2441, 2530
Bse1I ACTGG 3 cut(s) 608, 1891, 1992
Bse3DI GCAATG 2 cut(s) 666, 1501
BseBI CCWGG 1 cut(s) 500
BseCI ATCGAT 1 cut(s) 1733
BseDI CCNNGG 5 cut(s) 240, 1211, 1572, 1650, 2197
BseGI GGATG 9 cut(s) 319, 588, 1019, 1195, 1207, 1285, 2252, 2336, 2582
BseLI CCNNNNNNNGG 7 cut(s) 512, 884, 885, 988, 2024, 2441, 2530
BseMI GCAATG 2 cut(s) 666, 1501
BseMII CTCAG 4 cut(s) 351, 471, 884, 1241
BseNI ACTGG 3 cut(s) 608, 1891, 1992
BseRI GAGGAG 2 cut(s) 608, 2087
BseXI GCAGC 8 cut(s) 54, 166, 298, 361, 853, 925, 1075, 1979
BseYI CCCAGC 2 cut(s) 526, 2434
BsgI GTGCAG 1 cut(s) 338
Bsh1236I CGCG 1 cut(s) 2490
BshFI GGCC 4 cut(s) 260, 2017, 2123, 2511
BshVI ATCGAT 1 cut(s) 1733
BsiHKAI GWGCWC 1 cut(s) 1043
BsiHKCI CYCGRG 1 cut(s) 2198
BsiSI CCGG 2 cut(s) 242, 2442
BsiWI CGTACG 1 cut(s) 1992
BslFI GGGAC 3 cut(s) 101, 1117, 2285
BslI CCNNNNNNNGG 7 cut(s) 512, 884, 885, 988, 2024, 2441, 2530
BsmAI GTCTC 2 cut(s) 1369, 2497
BsmBI CGTCTC 1 cut(s) 2497
BsmFI GGGAC 3 cut(s) 101, 1117, 2285
BsmI GAATGC 1 cut(s) 2168
BsnI GGCC 4 cut(s) 260, 2017, 2123, 2511
BsoBI CYCGRG 1 cut(s) 2198
Bsp1286I GDGCHC 1 cut(s) 1043
Bsp1407I TGTACA 1 cut(s) 2400
Bsp19I CCATGG 1 cut(s) 1650
BspACI CCGC 6 cut(s) 311, 347, 456, 603, 730, 1140
BspANI GGCC 4 cut(s) 260, 2017, 2123, 2511
BspCNI CTCAG 4 cut(s) 350, 472, 883, 1242
BspDI ATCGAT 1 cut(s) 1733
BspFNI CGCG 1 cut(s) 2490
BspHI TCATGA 2 cut(s) 1786, 2541
BspLI GGNNCC 6 cut(s) 261, 504, 664, 876, 1133, 1305
BspMI ACCTGC 1 cut(s) 1951
BspPI GGATC 6 cut(s) 869, 882, 924, 1169, 1264, 2353
BspTI CTTAAG 2 cut(s) 1048, 2090
BsrBI CCGCTC 2 cut(s) 311, 605
BsrDI GCAATG 2 cut(s) 666, 1501
BsrGI TGTACA 1 cut(s) 2400
BsrI ACTGG 3 cut(s) 608, 1891, 1992
BssECI CCNNGG 5 cut(s) 240, 1211, 1572, 1650, 2197
BssT1I CCWWGG 3 cut(s) 1211, 1572, 1650
Bst2UI CCWGG 1 cut(s) 500
Bst6I CTCTTC 2 cut(s) 401, 2090
BstAFI CTTAAG 2 cut(s) 1048, 2090
BstAUI TGTACA 1 cut(s) 2400
BstC8I GCNNGC 3 cut(s) 372, 864, 1428
BstDEI CTNAG 6 cut(s) 337, 480, 754, 870, 1250, 2021
BstDSI CCRYGG 1 cut(s) 1650
BstENI CCTNNNNNAGG 1 cut(s) 986
BstF5I GGATG 9 cut(s) 319, 588, 1019, 1195, 1207, 1285, 2252, 2336, 2582
BstFNI CGCG 1 cut(s) 2490
BstMAI GTCTC 2 cut(s) 1369, 2497
BstMWI GCNNNNNNNGC 4 cut(s) 266, 380, 1635, 2579
BstNI CCWGG 1 cut(s) 500
BstNSI RCATGY 2 cut(s) 1491, 1910
BstSCI CCNGG 3 cut(s) 240, 498, 2440
BstSFI CTRYAG 3 cut(s) 226, 882, 1338
BstUI CGCG 1 cut(s) 2490
BstV1I GCAGC 8 cut(s) 54, 166, 298, 361, 853, 925, 1075, 1979
BstV2I GAAGAC 1 cut(s) 2049
BstX2I RGATCY 2 cut(s) 874, 1642
BstYI RGATCY 2 cut(s) 874, 1642
Bsu15I ATCGAT 1 cut(s) 1733
BsuI GTATCC 1 cut(s) 1317
BsuRI GGCC 4 cut(s) 260, 2017, 2123, 2511
BsuTUI ATCGAT 1 cut(s) 1733
BtgI CCRYGG 1 cut(s) 1650
BtgZI GCGATG 3 cut(s) 926, 1083, 2471
BtsCI GGATG 9 cut(s) 319, 588, 1019, 1195, 1207, 1285, 2252, 2336, 2582
BtsI GCAGTG 2 cut(s) 342, 1878
BveI ACCTGC 1 cut(s) 1951
Cac8I GCNNGC 3 cut(s) 372, 864, 1428
CaiI CAGNNNCTG 2 cut(s) 344, 533
CciI TCATGA 2 cut(s) 1786, 2541
Cfr13I GGNCC 4 cut(s) 259, 333, 1131, 2113
ClaI ATCGAT 1 cut(s) 1733
CseI GACGC 1 cut(s) 2479
Csp6I GTAC 8 cut(s) 484, 839, 1027, 1371, 1993, 2266, 2401, 2555
CspCI CAANNNNNGTGG 2 cut(s) 1141, 1176
CviQI GTAC 8 cut(s) 484, 839, 1027, 1371, 1993, 2266, 2401, 2555
DdeI CTNAG 6 cut(s) 337, 480, 754, 870, 1250, 2021
EaeI YGGCCR 1 cut(s) 2121
Eam1104I CTCTTC 2 cut(s) 401, 2090
EarI CTCTTC 2 cut(s) 401, 2090
Eco130I CCWWGG 3 cut(s) 1211, 1572, 1650
Eco147I AGGCCT 2 cut(s) 2017, 2511
Eco47I GGWCC 3 cut(s) 333, 1131, 2113
Eco57I CTGAAG 1 cut(s) 1041
Eco88I CYCGRG 1 cut(s) 2198
EcoNI CCTNNNNNAGG 1 cut(s) 986
EcoRI GAATTC 1 cut(s) 2445
EcoRII CCWGG 1 cut(s) 498
EcoT14I CCWWGG 3 cut(s) 1211, 1572, 1650
EcoT22I ATGCAT 2 cut(s) 1209, 2043
ErhI CCWWGG 3 cut(s) 1211, 1572, 1650
Esp3I CGTCTC 1 cut(s) 2497
FalI AAGNNNNNCTT 4 cut(s) 1830, 1862, 2570, 2602
FaqI GGGAC 3 cut(s) 101, 1117, 2285
FauI CCCGC 1 cut(s) 340
FbaI TGATCA 3 cut(s) 67, 724, 1725
Fnu4HI GCNGC 9 cut(s) 43, 155, 287, 375, 603, 867, 939, 1089, 1968
FokI GGATG 9 cut(s) 326, 595, 1026, 1194, 1202, 1292, 2239, 2323, 2569
Fsp4HI GCNGC 9 cut(s) 43, 155, 287, 375, 603, 867, 939, 1089, 1968
FspBI CTAG 7 cut(s) 36, 780, 1688, 1914, 2184, 2450, 2507
GluI GCNGC 9 cut(s) 43, 155, 287, 375, 603, 867, 939, 1089, 1968
GsaI CCCAGC 2 cut(s) 530, 2438
GsuI CTGGAG 3 cut(s) 106, 591, 1256
HaeIII GGCC 4 cut(s) 260, 2017, 2123, 2511
HapII CCGG 2 cut(s) 242, 2442
HgaI GACGC 1 cut(s) 2479
HincII GTYRAC 1 cut(s) 85
HindII GTYRAC 1 cut(s) 85
HindIII AAGCTT 4 cut(s) 208, 294, 368, 1802
HinfI GANTC 5 cut(s) 555, 1283, 1466, 1583, 2368
HpaII CCGG 2 cut(s) 242, 2442
HphI GGTGA 5 cut(s) 470, 2320, 2423, 2545, 2609
Hpy166II GTNNAC 5 cut(s) 85, 461, 518, 978, 2617
Hpy8I GTNNAC 5 cut(s) 85, 461, 518, 978, 2617
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 9 cut(s) 727, 1294, 1476, 1872, 2144, 2336, 2371, 2495, 2572
HpyCH4IV ACGT 2 cut(s) 1995, 2383
HpyF10VI GCNNNNNNNGC 4 cut(s) 266, 380, 1635, 2579
HpyF3I CTNAG 6 cut(s) 337, 480, 754, 870, 1250, 2021
HpySE526I ACGT 2 cut(s) 1995, 2383
Ksp22I TGATCA 3 cut(s) 67, 724, 1725
LmnI GCTCC 7 cut(s) 308, 350, 610, 935, 1038, 1309, 2074
Lsp1109I GCAGC 8 cut(s) 54, 166, 298, 361, 853, 925, 1075, 1979
LweI GCATC 9 cut(s) 441, 680, 1216, 1406, 1858, 1932, 1961, 2345, 2591
MaeI CTAG 7 cut(s) 36, 780, 1688, 1914, 2184, 2450, 2507
MaeII ACGT 2 cut(s) 1995, 2383
MaeIII GTNAC 8 cut(s) 340, 688, 892, 966, 1567, 1909, 2085, 2365
MbiI CCGCTC 2 cut(s) 311, 605
MfeI CAATTG 1 cut(s) 2117
MflI RGATCY 2 cut(s) 874, 1642
MhlI GDGCHC 1 cut(s) 1043
MlsI TGGCCA 1 cut(s) 2123
MluNI TGGCCA 1 cut(s) 2123
MlyI GAGTC 1 cut(s) 2362
MmeI TCCRAC 3 cut(s) 231, 1438, 1680
Mox20I TGGCCA 1 cut(s) 2123
Mph1103I ATGCAT 2 cut(s) 1209, 2043
MroXI GAANNNNTTC 1 cut(s) 209
MscI TGGCCA 1 cut(s) 2123
MslI CAYNNNNRTG 3 cut(s) 437, 456, 2396
Msp20I TGGCCA 1 cut(s) 2123
MspA1I CMGCKG 3 cut(s) 730, 1337, 1970
MspCI CTTAAG 2 cut(s) 1048, 2090
MspI CCGG 2 cut(s) 242, 2442
MspR9I CCNGG 3 cut(s) 242, 500, 2442
MunI CAATTG 1 cut(s) 2117
Mva1269I GAATGC 1 cut(s) 2168
MvaI CCWGG 1 cut(s) 500
MvnI CGCG 1 cut(s) 2490
MwoI GCNNNNNNNGC 4 cut(s) 266, 380, 1635, 2579
NciI CCSGG 2 cut(s) 242, 2442
NcoI CCATGG 1 cut(s) 1650
NlaIV GGNNCC 6 cut(s) 261, 504, 664, 876, 1133, 1305
NmuCI GTSAC 3 cut(s) 340, 1909, 2365
NsiI ATGCAT 2 cut(s) 1209, 2043
NspI RCATGY 2 cut(s) 1491, 1910
OliI CACNNNNGTG 1 cut(s) 456
PagI TCATGA 2 cut(s) 1786, 2541
PceI AGGCCT 2 cut(s) 2017, 2511
PciI ACATGT 1 cut(s) 1906
PcsI WCGNNNNNNNCGW 1 cut(s) 908
PctI GAATGC 1 cut(s) 2168
PdmI GAANNNNTTC 1 cut(s) 209
PfeI GAWTC 4 cut(s) 555, 1283, 1466, 1583
Pfl23II CGTACG 1 cut(s) 1992
PflMI CCANNNNNTGG 1 cut(s) 2530
PkrI GCNGC 9 cut(s) 44, 156, 288, 376, 604, 868, 940, 1090, 1969
PleI GAGTC 1 cut(s) 2362
PpsI GAGTC 1 cut(s) 2362
PscI ACATGT 1 cut(s) 1906
PsiI TTATAA 2 cut(s) 366, 2591
Psp6I CCWGG 1 cut(s) 498
PspFI CCCAGC 2 cut(s) 526, 2434
PspGI CCWGG 1 cut(s) 498
PspLI CGTACG 1 cut(s) 1992
PspN4I GGNNCC 6 cut(s) 261, 504, 664, 876, 1133, 1305
PspPI GGNCC 4 cut(s) 259, 333, 1131, 2113
PstNI CAGNNNCTG 2 cut(s) 344, 533
PsuI RGATCY 2 cut(s) 874, 1642
PvuII CAGCTG 2 cut(s) 1337, 1970
RsaI GTAC 8 cut(s) 485, 840, 1028, 1372, 1994, 2267, 2402, 2556
RsaNI GTAC 8 cut(s) 484, 839, 1027, 1371, 1993, 2266, 2401, 2555
RseI CAYNNNNRTG 3 cut(s) 437, 456, 2396
SatI GCNGC 9 cut(s) 43, 155, 287, 375, 603, 867, 939, 1089, 1968
Sau96I GGNCC 4 cut(s) 259, 333, 1131, 2113
SchI GAGTC 1 cut(s) 2362
ScrFI CCNGG 3 cut(s) 242, 500, 2442
SduI GDGCHC 1 cut(s) 1043
SfaNI GCATC 9 cut(s) 441, 680, 1216, 1406, 1858, 1932, 1961, 2345, 2591
SfcI CTRYAG 3 cut(s) 226, 882, 1338
SinI GGWCC 3 cut(s) 333, 1131, 2113
SmiMI CAYNNNNRTG 3 cut(s) 437, 456, 2396
SmlI CTYRAG 4 cut(s) 1022, 1048, 2090, 2414
SmoI CTYRAG 4 cut(s) 1022, 1048, 2090, 2414
SpeI ACTAGT 1 cut(s) 1913
SseBI AGGCCT 2 cut(s) 2017, 2511
SsiI CCGC 6 cut(s) 311, 347, 456, 603, 730, 1140
SspI AATATT 3 cut(s) 280, 1519, 1810
SspMI CTAG 7 cut(s) 36, 780, 1688, 1914, 2184, 2450, 2507
StuI AGGCCT 2 cut(s) 2017, 2511
StyD4I CCNGG 3 cut(s) 240, 498, 2440
StyI CCWWGG 3 cut(s) 1211, 1572, 1650
TaiI ACGT 2 cut(s) 1998, 2386
TaqI TCGA 3 cut(s) 1733, 1836, 2148
TaqII GACCGA 2 cut(s) 321, 1119
TatI WGTACW 1 cut(s) 2400
TauI GCSGC 1 cut(s) 605
TfiI GAWTC 4 cut(s) 555, 1283, 1466, 1583
TseFI GTSAC 3 cut(s) 340, 1909, 2365
TseI GCWGC 8 cut(s) 42, 154, 286, 374, 866, 938, 1088, 1967
Tsp45I GTSAC 3 cut(s) 340, 1909, 2365
TspDTI ATGAA 6 cut(s) 41, 1086, 2399, 2408, 2534, 2558
Van91I CCANNNNNTGG 1 cut(s) 2530
Vha464I CTTAAG 2 cut(s) 1048, 2090
VpaK11BI GGWCC 3 cut(s) 333, 1131, 2113
XagI CCTNNNNNAGG 1 cut(s) 986
XapI RAATTY 5 cut(s) 1762, 2179, 2445, 2527, 2603
XbaI TCTAGA 3 cut(s) 35, 779, 2449
XceI RCATGY 2 cut(s) 1491, 1910
XcmI CCANNNNNNNNNTGG 1 cut(s) 1657
XmnI GAANNNNTTC 1 cut(s) 209
XspI CTAG 7 cut(s) 36, 780, 1688, 1914, 2184, 2450, 2507
Zsp2I ATGCAT 2 cut(s) 1209, 2043
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.