U6 snRNA-associated Sm-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19120 AT3G14080 AT3G14080 AT3G14080 |
| fragaria_vesca | FvH4_6g35080 |
| malus_domestica | MD09G1179100.v1.1 MD17G1164700.v1.1 |
| prunus_persica | Prupe.3G038200_v2.0.a1 |
| pyrus_communis | pycom09g09730 pycom17g15780 |
| rosa_chinensis | RchiOBHm_Chr2g0146261 |
| rosa_laevigata | RLG00000020190 |
| rosa_multiflora | Rmu_sc0002054.1_g000018 |
| rosa_roxburghii | Rroxscaffold_2G00100200 |
| rosa_rugosa | Rorug02G0394000 |
| rosa_samantha | Rh2BG462400 Rh2CG437000 Rh2DG471600 |
| rosa_wichuraiana | Rw2G036740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 27 |
| AciI | CCGC | 1 cut(s) | 272 |
| AcoI | YGGCCR | 1 cut(s) | 45 |
| AluBI | AGCT | 4 cut(s) | 51, 244, 293, 324 |
| AluI | AGCT | 4 cut(s) | 51, 244, 293, 324 |
| Ama87I | CYCGRG | 1 cut(s) | 143 |
| AoxI | GGCC | 2 cut(s) | 13, 45 |
| ApeKI | GCWGC | 2 cut(s) | 76, 293 |
| AspS9I | GGNCC | 1 cut(s) | 14 |
| AvaI | CYCGRG | 1 cut(s) | 143 |
| BalI | TGGCCA | 1 cut(s) | 47 |
| BauI | CACGAG | 1 cut(s) | 282 |
| BbvI | GCAGC | 2 cut(s) | 63, 280 |
| BccI | CCATC | 1 cut(s) | 80 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 263, 297 |
| BciVI | GTATCC | 1 cut(s) | 99 |
| BclI | TGATCA | 1 cut(s) | 121 |
| BfmI | CTRYAG | 1 cut(s) | 294 |
| BfuI | GTATCC | 1 cut(s) | 99 |
| BisI | GCNGC | 2 cut(s) | 77, 294 |
| BlsI | GCNGC | 2 cut(s) | 78, 295 |
| BmeT110I | CYCGRG | 1 cut(s) | 143 |
| BmgT120I | GGNCC | 1 cut(s) | 14 |
| BsaJI | CCNNGG | 1 cut(s) | 214 |
| BseDI | CCNNGG | 1 cut(s) | 214 |
| BseXI | GCAGC | 2 cut(s) | 63, 280 |
| Bsh1285I | CGRYCG | 1 cut(s) | 116 |
| BshFI | GGCC | 2 cut(s) | 15, 47 |
| BsiEI | CGRYCG | 1 cut(s) | 116 |
| BsiHKCI | CYCGRG | 1 cut(s) | 143 |
| BsnI | GGCC | 2 cut(s) | 15, 47 |
| BsoBI | CYCGRG | 1 cut(s) | 143 |
| Bsp143I | GATC | 3 cut(s) | 113, 121, 175 |
| BspACI | CCGC | 1 cut(s) | 272 |
| BspANI | GGCC | 2 cut(s) | 15, 47 |
| BspMAI | CTGCAG | 1 cut(s) | 298 |
| BssECI | CCNNGG | 1 cut(s) | 214 |
| BssMI | GATC | 3 cut(s) | 113, 121, 175 |
| BssSI | CACGAG | 1 cut(s) | 282 |
| Bst2BI | CACGAG | 1 cut(s) | 282 |
| Bst4CI | ACNGT | 1 cut(s) | 185 |
| BstC8I | GCNNGC | 3 cut(s) | 13, 49, 242 |
| BstDSI | CCRYGG | 1 cut(s) | 214 |
| BstKTI | GATC | 3 cut(s) | 116, 124, 178 |
| BstMBI | GATC | 3 cut(s) | 113, 121, 175 |
| BstMCI | CGRYCG | 1 cut(s) | 116 |
| BstSFI | CTRYAG | 1 cut(s) | 294 |
| BstV1I | GCAGC | 2 cut(s) | 63, 280 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 43 |
| BsuI | GTATCC | 1 cut(s) | 99 |
| BsuRI | GGCC | 2 cut(s) | 15, 47 |
| BtgI | CCRYGG | 1 cut(s) | 214 |
| Cac8I | GCNNGC | 3 cut(s) | 13, 49, 242 |
| Cfr13I | GGNCC | 1 cut(s) | 14 |
| CviAII | CATG | 1 cut(s) | 277 |
| CviJI | RGCY | 6 cut(s) | 15, 47, 51, 244, 293, 324 |
| CviKI_1 | RGCY | 6 cut(s) | 15, 47, 51, 244, 293, 324 |
| DpnI | GATC | 3 cut(s) | 115, 123, 177 |
| DpnII | GATC | 3 cut(s) | 113, 121, 175 |
| EaeI | YGGCCR | 1 cut(s) | 45 |
| Eco32I | GATATC | 1 cut(s) | 190 |
| Eco88I | CYCGRG | 1 cut(s) | 143 |
| EcoRV | GATATC | 1 cut(s) | 190 |
| FaeI | CATG | 1 cut(s) | 280 |
| FaiI | YATR | 3 cut(s) | 207, 278, 328 |
| FatI | CATG | 1 cut(s) | 276 |
| FbaI | TGATCA | 1 cut(s) | 121 |
| FblI | GTMKAC | 1 cut(s) | 27 |
| Fnu4HI | GCNGC | 2 cut(s) | 77, 294 |
| Fsp4HI | GCNGC | 2 cut(s) | 77, 294 |
| GluI | GCNGC | 2 cut(s) | 77, 294 |
| HaeIII | GGCC | 2 cut(s) | 15, 47 |
| Hin1II | CATG | 1 cut(s) | 280 |
| HinfI | GANTC | 3 cut(s) | 162, 248, 280 |
| Hpy166II | GTNNAC | 1 cut(s) | 28 |
| Hpy188I | TCNGA | 1 cut(s) | 253 |
| Hpy188III | TCNNGA | 2 cut(s) | 56, 143 |
| Hpy8I | GTNNAC | 1 cut(s) | 28 |
| HpyCH4III | ACNGT | 1 cut(s) | 185 |
| HpyCH4V | TGCA | 1 cut(s) | 296 |
| Hsp92II | CATG | 1 cut(s) | 280 |
| Ksp22I | TGATCA | 1 cut(s) | 121 |
| Kzo9I | GATC | 3 cut(s) | 113, 121, 175 |
| LmnI | GCTCC | 1 cut(s) | 84 |
| LpnPI | CCDG | 4 cut(s) | 29, 30, 61, 230 |
| Lsp1109I | GCAGC | 2 cut(s) | 63, 280 |
| MalI | GATC | 3 cut(s) | 115, 123, 177 |
| MboI | GATC | 3 cut(s) | 113, 121, 175 |
| MboII | GAAGA | 1 cut(s) | 32 |
| MlsI | TGGCCA | 1 cut(s) | 47 |
| MluCI | AATT | 2 cut(s) | 125, 300 |
| MluNI | TGGCCA | 1 cut(s) | 47 |
| MlyI | GAGTC | 2 cut(s) | 171, 274 |
| MnlI | CCTC | 3 cut(s) | 139, 249, 253 |
| Mox20I | TGGCCA | 1 cut(s) | 47 |
| MscI | TGGCCA | 1 cut(s) | 47 |
| MseI | TTAA | 1 cut(s) | 303 |
| Msp20I | TGGCCA | 1 cut(s) | 47 |
| MspA1I | CMGCKG | 1 cut(s) | 293 |
| NdeII | GATC | 3 cut(s) | 113, 121, 175 |
| NlaIII | CATG | 1 cut(s) | 280 |
| PaeR7I | CTCGAG | 1 cut(s) | 143 |
| PfeI | GAWTC | 1 cut(s) | 248 |
| PkrI | GCNGC | 2 cut(s) | 78, 295 |
| Ple19I | CGATCG | 1 cut(s) | 116 |
| PleI | GAGTC | 2 cut(s) | 170, 274 |
| PpsI | GAGTC | 2 cut(s) | 170, 274 |
| PspPI | GGNCC | 1 cut(s) | 14 |
| PstI | CTGCAG | 1 cut(s) | 298 |
| PvuI | CGATCG | 1 cut(s) | 116 |
| PvuII | CAGCTG | 1 cut(s) | 293 |
| SaqAI | TTAA | 1 cut(s) | 303 |
| SatI | GCNGC | 2 cut(s) | 77, 294 |
| Sau3AI | GATC | 3 cut(s) | 113, 121, 175 |
| Sau96I | GGNCC | 1 cut(s) | 14 |
| SchI | GAGTC | 2 cut(s) | 171, 274 |
| SetI | ASST | 5 cut(s) | 33, 53, 246, 295, 326 |
| SfcI | CTRYAG | 1 cut(s) | 294 |
| Sfr274I | CTCGAG | 1 cut(s) | 143 |
| SlaI | CTCGAG | 1 cut(s) | 143 |
| SmlI | CTYRAG | 1 cut(s) | 143 |
| SmoI | CTYRAG | 1 cut(s) | 143 |
| Sse9I | AATT | 2 cut(s) | 125, 300 |
| SsiI | CCGC | 1 cut(s) | 272 |
| TaaI | ACNGT | 1 cut(s) | 185 |
| TaqI | TCGA | 3 cut(s) | 91, 112, 144 |
| TasI | AATT | 2 cut(s) | 125, 300 |
| TfiI | GAWTC | 1 cut(s) | 248 |
| Tru1I | TTAA | 1 cut(s) | 303 |
| Tru9I | TTAA | 1 cut(s) | 303 |
| TseI | GCWGC | 2 cut(s) | 76, 293 |
| TspGWI | ACGGA | 2 cut(s) | 71, 203 |
| XhoI | CTCGAG | 1 cut(s) | 143 |
| XmiI | GTMKAC | 1 cut(s) | 27 |