pycom17g26440
TCP Family

assists the folding of proteins upon ATP hydrolysis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0010112
Physical Location & Seq
Forward (+)
24727384 .. 24732424
5041 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g26440.1

Sequence Viewer

Length: 1320 bp
ATGCAGCCCTACGGAATACAATCGATGCTGAAGGAGGGCCACAAGCATCTCTCCGGTTTGGACGAGGCGGTGCTGAAGAACATCGATGCCTGCAAGCAACTCTCCACCATCACCAGAACTTCTCTCGGTCCCAATGGTATGAATAAGATGGTAATCAATCACTTGGACAAGCTATTTGTGACCAATGATGCTGCCACCATTGTCAATGAACTGGAGGTTCAGCATCCTGCTGCCAAGATATTGGTTTTGGCAGGCAGGGCTCAGCAGGAAGAAATCGGCGACGGCGCTAATCTCACCATTTCTTTTGCCGGGGAGCTCCTTCAAAACGCAGAGGAGCTTATCAGGATGGGCCTGCACCCGAGCGAGATCATTAGTGGATACAACAAAGCCATCAAAAAGACAATTGAAATCTTAGATGGACTGGTTGAGGAAGGTTCTGAGAACATGGATGTGCGCAACAAAGAACAAGTGGTTTGTAGAATGAAAGCTGCTATTGCCAGCAAGCAATTCGGGCAAGAAGATATCTTATCCTCGCTTGTTGCCGATGCATGTATACAAGTGTGCCCGAAGAACCCAGTAAACTTCAATGTGGATAACGTACGTGTTGCAAAGATTGTGGGAGGGGGTTTGCATAATTGTACAGTAGTTCGAGGTATGGTGTTGAAAACTGATGCTGTGGGGAGTATAAAGCGAATGGATAAGGCCAAGGTTGCTGTGTTTGCTGGTGGTGTTGATACCTCTGCAACTGAGACCAAGGGAACTGTCCTAATTCATACTGCTGACCAGCTAGAAAATTATGCAAAAACAGAAGAAGCTAAAATTGAGGAGCTCATCAAAGCAGTTGCAGATTCCGGTGCTAAAGTAATTGTCAGCGGAGCAGCAGTTGGAGAGATGGCACTACATTTTTGTGAGCGGTACAAGCTCATGGTGTTGAAAATCAGTTCAAAGTTTGAGTTGAGACGCTTTTGCCGTACAACTGGTGCTGTTGCCATGTTGAAGCTCAGCCAGCCTAACCCAGATGATTTGGGATATGTTGACTCTGTCTCGGTCGAGGAAATTGCTGGTGTTAGGGTCACTGTTGTGAAGAATGAAGAAGGGGGTAACTCTGTATCCACTGTGCTTCTACGAGGGAGTACTGACAGTATATTGGATGACCTCGAAAGAGCAGTTGATGATGGAGTGAACACGTACAAGGCAATGTGCAAGGATAGCCGTATTGTTCCTGGAGCTGCAGCTACTGAAATTGAGTTAGCTAGGAGACTAAAGGAATTCTCTTTTACAGAAACAGGTGGATCAGTATGCTATTGCAAAATTTGCTGA

Protein Analysis

440

Amino Acids

47.33

Weight (kDa)

5.76

Isoelectric Point (pI)

35.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cpn60_TCP1 PF00118 34 - 430 3e-121 TCP-1/cpn60 chaperonin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 455
AccBSI CCGCTC 1 cut(s) 913
AccI GTMKAC 1 cut(s) 553
AciI CCGC 3 cut(s) 68, 873, 913
AclWI GGATC 1 cut(s) 1300
AcsI RAATTY 2 cut(s) 1268, 1311
AcuI CTGAAG 2 cut(s) 50, 95
AfaI GTAC 6 cut(s) 600, 640, 917, 973, 1135, 1190
AflIII ACRYGT 2 cut(s) 601, 1185
AgsI TTSAA 7 cut(s) 323, 407, 586, 664, 934, 945, 997
AjnI CCWGG 1 cut(s) 1222
AleI CACNNNNGTG 1 cut(s) 1079
Alw21I GWGCWC 2 cut(s) 318, 831
Alw26I GTCTC 4 cut(s) 743, 952, 1048, 1252
AlwI GGATC 1 cut(s) 1300
AlwNI CAGNNNCTG 1 cut(s) 1238
Ama87I CYCGRG 1 cut(s) 358
AoxI GGCC 3 cut(s) 37, 349, 702
ApeKI GCWGC 7 cut(s) 4, 191, 230, 488, 878, 1229, 1232
ApoI RAATTY 2 cut(s) 1268, 1311
ArsI GACNNNNNNTTYG 2 cut(s) 158, 190
AspLEI GCGC 2 cut(s) 287, 456
AspS9I GGNCC 3 cut(s) 37, 128, 349
AsuC2I CCSGG 1 cut(s) 310
AsuHPI GGTGA 2 cut(s) 103, 286
AvaI CYCGRG 1 cut(s) 358
AvaII GGWCC 1 cut(s) 128
BaeGI GKGCMC 1 cut(s) 566
BanII GRGCYC 3 cut(s) 262, 318, 831
Bbv12I GWGCWC 2 cut(s) 318, 831
BbvI GCAGC 7 cut(s) 16, 178, 217, 475, 890, 1216, 1244
BccI CCATC 7 cut(s) 116, 142, 340, 398, 410, 886, 1169
BceAI ACGGC 3 cut(s) 298, 954, 1197
BcgI CGANNNNNNTGC 4 cut(s) 490, 524, 1040, 1074
BciT130I CCWGG 1 cut(s) 1224
BciVI GTATCC 2 cut(s) 371, 1120
BcnI CCSGG 1 cut(s) 310
BcoDI GTCTC 4 cut(s) 743, 952, 1048, 1252
BfaI CTAG 2 cut(s) 788, 1254
BfmI CTRYAG 1 cut(s) 1230
BfoI RGCGCY 1 cut(s) 288
BfuI GTATCC 2 cut(s) 371, 1120
BisI GCNGC 7 cut(s) 5, 192, 231, 489, 879, 1230, 1233
BlpI GCTNAGC 2 cut(s) 261, 1001
BlsI GCNGC 7 cut(s) 6, 193, 232, 490, 880, 1231, 1234
BmcAI AGTACT 1 cut(s) 1135
Bme1390I CCNGG 2 cut(s) 310, 1224
Bme18I GGWCC 1 cut(s) 128
BmeT110I CYCGRG 1 cut(s) 358
BmgT120I GGNCC 3 cut(s) 37, 128, 349
BmiI GGNNCC 1 cut(s) 130
BmrFI CCNGG 2 cut(s) 310, 1224
BmrI ACTGGG 1 cut(s) 569
BmsI GCATC 7 cut(s) 15, 55, 76, 178, 232, 535, 661
BmuI ACTGGG 1 cut(s) 569
BpmI CTGGAG 2 cut(s) 233, 1245
Bpu1102I GCTNAGC 2 cut(s) 261, 1001
BpuMI CCSGG 1 cut(s) 310
Bsa29I ATCGAT 2 cut(s) 23, 84
BsaAI YACGTR 2 cut(s) 602, 1188
BsaBI GATNNNNATC 1 cut(s) 152
BsaI GGTCTC 1 cut(s) 743
BsaJI CCNNGG 3 cut(s) 309, 705, 753
BsaWI WCCGGW 2 cut(s) 53, 851
BsaXI ACNNNNNCTCC 2 cut(s) 867, 897
Bse1I ACTGG 4 cut(s) 216, 426, 575, 982
Bse3DI GCAATG 1 cut(s) 1203
Bse8I GATNNNNATC 1 cut(s) 152
BseBI CCWGG 1 cut(s) 1224
BseCI ATCGAT 2 cut(s) 23, 84
BseDI CCNNGG 3 cut(s) 309, 705, 753
BseGI GGATG 4 cut(s) 223, 351, 454, 1156
BseJI GATNNNNATC 1 cut(s) 152
BseMI GCAATG 1 cut(s) 1203
BseMII CTCAG 4 cut(s) 275, 429, 738, 1015
BseNI ACTGG 4 cut(s) 216, 426, 575, 982
BseRI GAGGAG 2 cut(s) 347, 839
BseSI GKGCMC 1 cut(s) 566
BseXI GCAGC 7 cut(s) 16, 178, 217, 475, 890, 1216, 1244
BsgI GTGCAG 1 cut(s) 338
Bsh1285I CGRYCG 1 cut(s) 1050
BshFI GGCC 3 cut(s) 39, 351, 704
BshVI ATCGAT 2 cut(s) 23, 84
BsiEI CGRYCG 1 cut(s) 1050
BsiHKAI GWGCWC 2 cut(s) 318, 831
BsiHKCI CYCGRG 1 cut(s) 358
BsiSI CCGG 3 cut(s) 54, 309, 852
BsiWI CGTACG 1 cut(s) 598
BslFI GGGAC 1 cut(s) 114
BsmAI GTCTC 4 cut(s) 743, 952, 1048, 1252
BsmBI CGTCTC 1 cut(s) 952
BsmFI GGGAC 1 cut(s) 114
BsnI GGCC 3 cut(s) 39, 351, 704
Bso31I GGTCTC 1 cut(s) 743
BsoBI CYCGRG 1 cut(s) 358
Bsp1286I GDGCHC 4 cut(s) 262, 318, 566, 831
Bsp1407I TGTACA 1 cut(s) 638
Bsp143I GATC 2 cut(s) 366, 1292
Bsp1720I GCTNAGC 2 cut(s) 261, 1001
BspACI CCGC 3 cut(s) 68, 873, 913
BspANI GGCC 3 cut(s) 39, 351, 704
BspCNI CTCAG 4 cut(s) 274, 430, 739, 1014
BspDI ATCGAT 2 cut(s) 23, 84
BspLI GGNNCC 1 cut(s) 130
BspMAI CTGCAG 1 cut(s) 1234
BspPI GGATC 1 cut(s) 1300
BspTNI GGTCTC 1 cut(s) 743
BsrBI CCGCTC 1 cut(s) 913
BsrDI GCAATG 1 cut(s) 1203
BsrGI TGTACA 1 cut(s) 638
BsrI ACTGG 4 cut(s) 216, 426, 575, 982
BssECI CCNNGG 3 cut(s) 309, 705, 753
BssMI GATC 2 cut(s) 366, 1292
BssNAI GTATAC 1 cut(s) 554
BssT1I CCWWGG 2 cut(s) 705, 753
Bst1107I GTATAC 1 cut(s) 554
Bst2UI CCWGG 1 cut(s) 1224
Bst4CI ACNGT 5 cut(s) 643, 763, 1078, 1117, 1142
BstAPI GCANNNNNTGC 1 cut(s) 1314
BstAUI TGTACA 1 cut(s) 638
BstBAI YACGTR 2 cut(s) 602, 1188
BstC8I GCNNGC 7 cut(s) 91, 95, 253, 353, 499, 503, 1007
BstDEI CTNAG 5 cut(s) 261, 412, 438, 747, 1001
BstF5I GGATG 4 cut(s) 223, 351, 454, 1156
BstH2I RGCGCY 1 cut(s) 288
BstHHI GCGC 2 cut(s) 287, 456
BstKTI GATC 2 cut(s) 369, 1295
BstMAI GTCTC 4 cut(s) 743, 952, 1048, 1252
BstMBI GATC 2 cut(s) 366, 1292
BstMCI CGRYCG 1 cut(s) 1050
BstMWI GCNNNNNNNGC 9 cut(s) 257, 494, 511, 710, 719, 919, 1006, 1209, 1314
BstNI CCWGG 1 cut(s) 1224
BstNSI RCATGY 1 cut(s) 552
BstSCI CCNGG 2 cut(s) 308, 1222
BstSFI CTRYAG 1 cut(s) 1230
BstSLI GKGCMC 1 cut(s) 566
BstV1I GCAGC 7 cut(s) 16, 178, 217, 475, 890, 1216, 1244
BstXI CCANNNNNNTGG 1 cut(s) 241
BstZ17I GTATAC 1 cut(s) 554
Bsu15I ATCGAT 2 cut(s) 23, 84
BsuI GTATCC 2 cut(s) 371, 1120
BsuRI GGCC 3 cut(s) 39, 351, 704
BsuTUI ATCGAT 2 cut(s) 23, 84
BtsCI GGATG 4 cut(s) 223, 351, 454, 1156
BtsIMutI CAGTG 2 cut(s) 1074, 1113
Cac8I GCNNGC 7 cut(s) 91, 95, 253, 353, 499, 503, 1007
CaiI CAGNNNCTG 1 cut(s) 1238
CfoI GCGC 2 cut(s) 287, 456
Cfr13I GGNCC 3 cut(s) 37, 128, 349
ClaI ATCGAT 2 cut(s) 23, 84
CseI GACGC 1 cut(s) 969
Csp6I GTAC 6 cut(s) 599, 639, 916, 972, 1134, 1189
CspCI CAANNNNNGTGG 2 cut(s) 597, 632
CviAII CATG 4 cut(s) 445, 549, 925, 991
CviQI GTAC 6 cut(s) 599, 639, 916, 972, 1134, 1189
DdeI CTNAG 5 cut(s) 261, 412, 438, 747, 1001
DpnI GATC 2 cut(s) 368, 1294
DpnII GATC 2 cut(s) 366, 1292
Ecl136II GAGCTC 2 cut(s) 316, 829
Eco130I CCWWGG 2 cut(s) 705, 753
Eco24I GRGCYC 3 cut(s) 262, 318, 831
Eco31I GGTCTC 1 cut(s) 743
Eco32I GATATC 1 cut(s) 523
Eco47I GGWCC 1 cut(s) 128
Eco53kI GAGCTC 2 cut(s) 316, 829
Eco57I CTGAAG 2 cut(s) 50, 95
Eco88I CYCGRG 1 cut(s) 358
EcoICRI GAGCTC 2 cut(s) 316, 829
EcoRI GAATTC 1 cut(s) 1268
EcoRII CCWGG 1 cut(s) 1222
EcoRV GATATC 1 cut(s) 523
EcoT14I CCWWGG 2 cut(s) 705, 753
EcoT22I ATGCAT 1 cut(s) 550
EcoT38I GRGCYC 3 cut(s) 262, 318, 831
ErhI CCWWGG 2 cut(s) 705, 753
Esp3I CGTCTC 1 cut(s) 952
FaeI CATG 4 cut(s) 448, 552, 928, 994
FaqI GGGAC 1 cut(s) 114
FatI CATG 4 cut(s) 444, 548, 924, 990
FblI GTMKAC 1 cut(s) 553
Fnu4HI GCNGC 7 cut(s) 5, 192, 231, 489, 879, 1230, 1233
FokI GGATG 4 cut(s) 210, 358, 461, 1163
FriOI GRGCYC 3 cut(s) 262, 318, 831
Fsp4HI GCNGC 7 cut(s) 5, 192, 231, 489, 879, 1230, 1233
FspBI CTAG 2 cut(s) 788, 1254
FspI TGCGCA 1 cut(s) 455
GlaI GCGC 2 cut(s) 286, 455
GluI GCNGC 7 cut(s) 5, 192, 231, 489, 879, 1230, 1233
GsuI CTGGAG 2 cut(s) 233, 1245
HaeII RGCGCY 1 cut(s) 288
HaeIII GGCC 3 cut(s) 39, 351, 704
HapII CCGG 3 cut(s) 54, 309, 852
HgaI GACGC 1 cut(s) 969
HhaI GCGC 2 cut(s) 287, 456
Hin1II CATG 4 cut(s) 448, 552, 928, 994
Hin6I GCGC 2 cut(s) 285, 454
HinP1I GCGC 2 cut(s) 285, 454
HincII GTYRAC 1 cut(s) 1036
HindII GTYRAC 1 cut(s) 1036
HinfI GANTC 2 cut(s) 848, 1037
HpaII CCGG 3 cut(s) 54, 309, 852
HphI GGTGA 2 cut(s) 103, 286
Hpy166II GTNNAC 4 cut(s) 554, 580, 1036, 1183
Hpy188I TCNGA 1 cut(s) 439
Hpy188III TCNNGA 1 cut(s) 343
Hpy8I GTNNAC 4 cut(s) 554, 580, 1036, 1183
Hpy99I CGWCG 1 cut(s) 284
HpyAV CCTTC 4 cut(s) 25, 329, 425, 1088
HpyCH4III ACNGT 5 cut(s) 643, 763, 1078, 1117, 1142
HpyCH4IV ACGT 3 cut(s) 597, 601, 1187
HpyF10VI GCNNNNNNNGC 9 cut(s) 257, 494, 511, 710, 719, 919, 1006, 1209, 1314
HpyF3I CTNAG 5 cut(s) 261, 412, 438, 747, 1001
HpySE526I ACGT 3 cut(s) 597, 601, 1187
Hsp92II CATG 4 cut(s) 448, 552, 928, 994
HspAI GCGC 2 cut(s) 285, 454
Kzo9I GATC 2 cut(s) 366, 1292
LmnI GCTCC 6 cut(s) 313, 321, 334, 826, 875, 1226
Lsp1109I GCAGC 7 cut(s) 16, 178, 217, 475, 890, 1216, 1244
LweI GCATC 7 cut(s) 15, 55, 76, 178, 232, 535, 661
MaeI CTAG 2 cut(s) 788, 1254
MaeII ACGT 3 cut(s) 597, 601, 1187
MaeIII GTNAC 3 cut(s) 178, 1072, 1100
MalI GATC 2 cut(s) 368, 1294
MbiI CCGCTC 1 cut(s) 913
MboI GATC 2 cut(s) 366, 1292
MboII GAAGA 7 cut(s) 88, 281, 530, 580, 821, 1096, 1103
MfeI CAATTG 1 cut(s) 402
MhlI GDGCHC 4 cut(s) 262, 318, 566, 831
MlyI GAGTC 1 cut(s) 1031
MmeI TCCRAC 1 cut(s) 865
Mph1103I ATGCAT 1 cut(s) 550
MslI CAYNNNNRTG 3 cut(s) 449, 906, 1079
MspA1I CMGCKG 1 cut(s) 873
MspI CCGG 3 cut(s) 54, 309, 852
MspR9I CCNGG 2 cut(s) 310, 1224
MunI CAATTG 1 cut(s) 402
MvaI CCWGG 1 cut(s) 1224
MwoI GCNNNNNNNGC 9 cut(s) 257, 494, 511, 710, 719, 919, 1006, 1209, 1314
NciI CCSGG 1 cut(s) 310
NdeII GATC 2 cut(s) 366, 1292
NlaIII CATG 4 cut(s) 448, 552, 928, 994
NlaIV GGNNCC 1 cut(s) 130
NmuCI GTSAC 2 cut(s) 178, 1072
NsbI TGCGCA 1 cut(s) 455
NsiI ATGCAT 1 cut(s) 550
NspI RCATGY 1 cut(s) 552
OliI CACNNNNGTG 1 cut(s) 1079
PcsI WCGNNNNNNNCGW 1 cut(s) 967
PfeI GAWTC 1 cut(s) 848
Pfl23II CGTACG 1 cut(s) 598
PflFI GACNNNGTC 1 cut(s) 1040
PfoI TCCNGGA 1 cut(s) 1222
PkrI GCNGC 7 cut(s) 6, 193, 232, 490, 880, 1231, 1234
PleI GAGTC 1 cut(s) 1031
PpsI GAGTC 1 cut(s) 1031
Ppu21I YACGTR 2 cut(s) 602, 1188
Psp124BI GAGCTC 2 cut(s) 318, 831
Psp6I CCWGG 1 cut(s) 1222
PspGI CCWGG 1 cut(s) 1222
PspLI CGTACG 1 cut(s) 598
PspN4I GGNNCC 1 cut(s) 130
PspPI GGNCC 3 cut(s) 37, 128, 349
PstI CTGCAG 1 cut(s) 1234
PstNI CAGNNNCTG 1 cut(s) 1238
PsyI GACNNNGTC 1 cut(s) 1040
RsaI GTAC 6 cut(s) 600, 640, 917, 973, 1135, 1190
RsaNI GTAC 6 cut(s) 599, 639, 916, 972, 1134, 1189
RseI CAYNNNNRTG 3 cut(s) 449, 906, 1079
SacI GAGCTC 2 cut(s) 318, 831
SatI GCNGC 7 cut(s) 5, 192, 231, 489, 879, 1230, 1233
Sau3AI GATC 2 cut(s) 366, 1292
Sau96I GGNCC 3 cut(s) 37, 128, 349
ScaI AGTACT 1 cut(s) 1135
SchI GAGTC 1 cut(s) 1031
ScrFI CCNGG 2 cut(s) 310, 1224
SduI GDGCHC 4 cut(s) 262, 318, 566, 831
SfaNI GCATC 7 cut(s) 15, 55, 76, 178, 232, 535, 661
SfcI CTRYAG 1 cut(s) 1230
SinI GGWCC 1 cut(s) 128
SmiMI CAYNNNNRTG 3 cut(s) 449, 906, 1079
SsiI CCGC 3 cut(s) 68, 873, 913
SspMI CTAG 2 cut(s) 788, 1254
SstI GAGCTC 2 cut(s) 318, 831
StyD4I CCNGG 2 cut(s) 308, 1222
StyI CCWWGG 2 cut(s) 705, 753
TaaI ACNGT 5 cut(s) 643, 763, 1078, 1117, 1142
TaiI ACGT 3 cut(s) 600, 604, 1190
TaqI TCGA 5 cut(s) 23, 84, 649, 1050, 1158
TaqII GACCGA 2 cut(s) 116, 1036
TatI WGTACW 2 cut(s) 638, 1133
TfiI GAWTC 1 cut(s) 848
TscAI CASTG 2 cut(s) 1081, 1120
TseFI GTSAC 2 cut(s) 178, 1072
TseI GCWGC 7 cut(s) 4, 191, 230, 488, 878, 1229, 1232
Tsp45I GTSAC 2 cut(s) 178, 1072
TspDTI ATGAA 5 cut(s) 155, 222, 497, 761, 1104
TspGWI ACGGA 1 cut(s) 27
TspRI CASTG 2 cut(s) 1081, 1120
Tth111I GACNNNGTC 1 cut(s) 1040
VpaK11BI GGWCC 1 cut(s) 128
XapI RAATTY 2 cut(s) 1268, 1311
XceI RCATGY 1 cut(s) 552
XmiI GTMKAC 1 cut(s) 553
XspI CTAG 2 cut(s) 788, 1254
ZrmI AGTACT 1 cut(s) 1135
Zsp2I ATGCAT 1 cut(s) 550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.