assists the folding of proteins upon ATP hydrolysis
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03960 |
| fragaria_vesca | FvH4_6g27660 FvH4_6g27660 |
| malus_domestica | MD09G1235600.v1.1 MD17G1264300.v1.1 MD17G1264600.v1.1 |
| prunus_persica | Prupe.3G113600_v2.0.a1 Prupe.3G114000_v2.0.a1 |
| pyrus_communis | pycom09g15360 pycom17g26410 pycom17g26440 |
| rosa_chinensis | RchiOBHm_Chr2g0130701 |
| rosa_laevigata | RLG00000019142 |
| rosa_multiflora | Rmu_co8506905.1_g000001 Rmu_sc0002279.1_g000053 |
| rosa_roxburghii | Rroxscaffold_2G00113700 |
| rosa_rugosa | Rorug02G0292700 |
| rosa_samantha | Rh2AG344300 Rh2BG352600 Rh2DG370700 |
| rosa_wichuraiana | Rw2G027540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1457 |
| AccB1I | GGYRCC | 2 cut(s) | 191, 1231 |
| AccBSI | CCGCTC | 1 cut(s) | 1061 |
| AccI | GTMKAC | 1 cut(s) | 553 |
| AciI | CCGC | 5 cut(s) | 68, 230, 1061, 1108, 1256 |
| AclWI | GGATC | 1 cut(s) | 1197 |
| AcoI | YGGCCR | 1 cut(s) | 231 |
| AcsI | RAATTY | 2 cut(s) | 842, 1208 |
| AcuI | CTGAAG | 1 cut(s) | 50 |
| AfaI | GTAC | 6 cut(s) | 11, 600, 640, 868, 1030, 1437 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1475, 1486, 1487 |
| AflIII | ACRYGT | 1 cut(s) | 601 |
| AgsI | TTSAA | 7 cut(s) | 407, 840, 848, 892, 1055, 1174, 1269 |
| AjiI | CACGTC | 1 cut(s) | 451 |
| AjnI | CCWGG | 2 cut(s) | 1117, 1148 |
| AleI | CACNNNNGTG | 1 cut(s) | 200 |
| Alw26I | GTCTC | 3 cut(s) | 434, 847, 943 |
| AlwI | GGATC | 1 cut(s) | 1197 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1133, 1424 |
| Ama87I | CYCGRG | 1 cut(s) | 212 |
| AoxI | GGCC | 4 cut(s) | 87, 231, 702, 1477 |
| ApeKI | GCWGC | 7 cut(s) | 316, 681, 1124, 1127, 1304, 1415, 1424 |
| ApoI | RAATTY | 2 cut(s) | 842, 1208 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 158, 190 |
| AspS9I | GGNCC | 4 cut(s) | 128, 1378, 1478, 1492 |
| AsuHPI | GGTGA | 3 cut(s) | 85, 286, 1087 |
| AvaI | CYCGRG | 1 cut(s) | 212 |
| AvaII | GGWCC | 3 cut(s) | 128, 1378, 1492 |
| BaeGI | GKGCMC | 1 cut(s) | 42 |
| BanI | GGYRCC | 2 cut(s) | 191, 1231 |
| BbsI | GAAGAC | 1 cut(s) | 404 |
| BbvI | GCAGC | 7 cut(s) | 303, 693, 1111, 1139, 1316, 1402, 1411 |
| BccI | CCATC | 7 cut(s) | 116, 142, 275, 340, 781, 1064, 1222 |
| BceAI | ACGGC | 2 cut(s) | 151, 849 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 106, 140 |
| BciT130I | CCWGG | 2 cut(s) | 1119, 1150 |
| BciVI | GTATCC | 1 cut(s) | 371 |
| BcoDI | GTCTC | 3 cut(s) | 434, 847, 943 |
| BfmI | CTRYAG | 5 cut(s) | 642, 1125, 1200, 1416, 1500 |
| BfuI | GTATCC | 1 cut(s) | 371 |
| BisI | GCNGC | 9 cut(s) | 231, 317, 682, 1108, 1125, 1128, 1305, 1416, 1425 |
| BlsI | GCNGC | 9 cut(s) | 232, 318, 683, 1109, 1126, 1129, 1306, 1417, 1426 |
| BmcAI | AGTACT | 1 cut(s) | 1030 |
| Bme1390I | CCNGG | 2 cut(s) | 1119, 1150 |
| Bme18I | GGWCC | 3 cut(s) | 128, 1378, 1492 |
| BmeT110I | CYCGRG | 1 cut(s) | 212 |
| BmgBI | CACGTC | 1 cut(s) | 451 |
| BmgT120I | GGNCC | 4 cut(s) | 128, 1378, 1478, 1492 |
| BmiI | GGNNCC | 5 cut(s) | 130, 193, 1233, 1379, 1493 |
| BmrFI | CCNGG | 2 cut(s) | 1119, 1150 |
| BmsI | GCATC | 4 cut(s) | 364, 535, 661, 1411 |
| BpiI | GAAGAC | 1 cut(s) | 404 |
| BpmI | CTGGAG | 1 cut(s) | 1140 |
| BpuEI | CTTGAG | 1 cut(s) | 1391 |
| BsaAI | YACGTR | 1 cut(s) | 602 |
| BsaBI | GATNNNNATC | 1 cut(s) | 152 |
| BsaJI | CCNNGG | 4 cut(s) | 330, 705, 753, 1481 |
| BsaWI | WCCGGW | 1 cut(s) | 53 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1475, 1486, 1487 |
| Bse1I | ACTGG | 1 cut(s) | 426 |
| Bse8I | GATNNNNATC | 1 cut(s) | 152 |
| BseBI | CCWGG | 2 cut(s) | 1119, 1150 |
| BseDI | CCNNGG | 4 cut(s) | 330, 705, 753, 1481 |
| BseGI | GGATG | 4 cut(s) | 67, 351, 355, 1516 |
| BseJI | GATNNNNATC | 1 cut(s) | 152 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1475, 1486, 1487 |
| BseMII | CTCAG | 2 cut(s) | 429, 954 |
| BseNI | ACTGG | 1 cut(s) | 426 |
| BseRI | GAGGAG | 2 cut(s) | 284, 347 |
| BseSI | GKGCMC | 1 cut(s) | 42 |
| BseXI | GCAGC | 7 cut(s) | 303, 693, 1111, 1139, 1316, 1402, 1411 |
| BseYI | CCCAGC | 2 cut(s) | 574, 1307 |
| BsgI | GTGCAG | 2 cut(s) | 1117, 1414 |
| BshFI | GGCC | 4 cut(s) | 89, 233, 704, 1479 |
| BshNI | GGYRCC | 2 cut(s) | 191, 1231 |
| BsiHKCI | CYCGRG | 1 cut(s) | 212 |
| BsiSI | CCGG | 2 cut(s) | 54, 309 |
| BslFI | GGGAC | 3 cut(s) | 114, 1391, 1505 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1475, 1486, 1487 |
| BsmAI | GTCTC | 3 cut(s) | 434, 847, 943 |
| BsmBI | CGTCTC | 1 cut(s) | 847 |
| BsmFI | GGGAC | 3 cut(s) | 114, 1391, 1505 |
| BsnI | GGCC | 4 cut(s) | 89, 233, 704, 1479 |
| BsoBI | CYCGRG | 1 cut(s) | 212 |
| Bsp1286I | GDGCHC | 1 cut(s) | 42 |
| Bsp143I | GATC | 4 cut(s) | 366, 916, 1189, 1447 |
| BspACI | CCGC | 5 cut(s) | 68, 230, 1061, 1108, 1256 |
| BspANI | GGCC | 4 cut(s) | 89, 233, 704, 1479 |
| BspCNI | CTCAG | 2 cut(s) | 430, 953 |
| BspLI | GGNNCC | 5 cut(s) | 130, 193, 1233, 1379, 1493 |
| BspMAI | CTGCAG | 3 cut(s) | 1129, 1420, 1504 |
| BspPI | GGATC | 1 cut(s) | 1197 |
| BspT107I | GGYRCC | 2 cut(s) | 191, 1231 |
| BsrBI | CCGCTC | 1 cut(s) | 1061 |
| BsrI | ACTGG | 1 cut(s) | 426 |
| BssECI | CCNNGG | 4 cut(s) | 330, 705, 753, 1481 |
| BssMI | GATC | 4 cut(s) | 366, 916, 1189, 1447 |
| BssNAI | GTATAC | 1 cut(s) | 554 |
| BssT1I | CCWWGG | 3 cut(s) | 705, 753, 1481 |
| Bst1107I | GTATAC | 1 cut(s) | 554 |
| Bst2UI | CCWGG | 2 cut(s) | 1119, 1150 |
| Bst4CI | ACNGT | 8 cut(s) | 191, 638, 643, 763, 871, 1012, 1220, 1435 |
| Bst6I | CTCTTC | 1 cut(s) | 513 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 494, 1211, 1424, 1469 |
| BstBAI | YACGTR | 1 cut(s) | 602 |
| BstDEI | CTNAG | 4 cut(s) | 438, 940, 1019, 1392 |
| BstF5I | GGATG | 4 cut(s) | 67, 351, 355, 1516 |
| BstKTI | GATC | 4 cut(s) | 369, 919, 1192, 1450 |
| BstMAI | GTCTC | 3 cut(s) | 434, 847, 943 |
| BstMBI | GATC | 4 cut(s) | 366, 916, 1189, 1447 |
| BstNI | CCWGG | 2 cut(s) | 1119, 1150 |
| BstNSI | RCATGY | 3 cut(s) | 329, 552, 1304 |
| BstSCI | CCNGG | 2 cut(s) | 1117, 1148 |
| BstSFI | CTRYAG | 5 cut(s) | 642, 1125, 1200, 1416, 1500 |
| BstSLI | GKGCMC | 1 cut(s) | 42 |
| BstV1I | GCAGC | 7 cut(s) | 303, 693, 1111, 1139, 1316, 1402, 1411 |
| BstV2I | GAAGAC | 1 cut(s) | 404 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 241 |
| BstZ17I | GTATAC | 1 cut(s) | 554 |
| BsuI | GTATCC | 1 cut(s) | 371 |
| BsuRI | GGCC | 4 cut(s) | 89, 233, 704, 1479 |
| BtgZI | GCGATG | 1 cut(s) | 294 |
| BtrI | CACGTC | 1 cut(s) | 451 |
| BtsCI | GGATG | 4 cut(s) | 67, 351, 355, 1516 |
| BtsIMutI | CAGTG | 1 cut(s) | 1431 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1133, 1424 |
| Cfr13I | GGNCC | 4 cut(s) | 128, 1378, 1478, 1492 |
| Csp6I | GTAC | 6 cut(s) | 10, 599, 639, 867, 1029, 1436 |
| CviAII | CATG | 7 cut(s) | 139, 326, 549, 820, 1301, 1385, 1507 |
| CviQI | GTAC | 6 cut(s) | 10, 599, 639, 867, 1029, 1436 |
| DdeI | CTNAG | 4 cut(s) | 438, 940, 1019, 1392 |
| DpnI | GATC | 4 cut(s) | 368, 918, 1191, 1449 |
| DpnII | GATC | 4 cut(s) | 366, 916, 1189, 1447 |
| EaeI | YGGCCR | 1 cut(s) | 231 |
| Eam1104I | CTCTTC | 1 cut(s) | 513 |
| EarI | CTCTTC | 1 cut(s) | 513 |
| Eco130I | CCWWGG | 3 cut(s) | 705, 753, 1481 |
| Eco147I | AGGCCT | 1 cut(s) | 89 |
| Eco47I | GGWCC | 3 cut(s) | 128, 1378, 1492 |
| Eco57I | CTGAAG | 1 cut(s) | 50 |
| Eco88I | CYCGRG | 1 cut(s) | 212 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1378 |
| EcoRII | CCWGG | 2 cut(s) | 1117, 1148 |
| EcoT14I | CCWWGG | 3 cut(s) | 705, 753, 1481 |
| EcoT22I | ATGCAT | 1 cut(s) | 550 |
| ErhI | CCWWGG | 3 cut(s) | 705, 753, 1481 |
| Esp3I | CGTCTC | 1 cut(s) | 847 |
| FaeI | CATG | 7 cut(s) | 142, 329, 552, 823, 1304, 1388, 1510 |
| FaqI | GGGAC | 3 cut(s) | 114, 1391, 1505 |
| FatI | CATG | 7 cut(s) | 138, 325, 548, 819, 1300, 1384, 1506 |
| FauI | CCCGC | 1 cut(s) | 1249 |
| FblI | GTMKAC | 1 cut(s) | 553 |
| Fnu4HI | GCNGC | 9 cut(s) | 231, 317, 682, 1108, 1125, 1128, 1305, 1416, 1425 |
| FokI | GGATG | 3 cut(s) | 74, 342, 358 |
| Fsp4HI | GCNGC | 9 cut(s) | 231, 317, 682, 1108, 1125, 1128, 1305, 1416, 1425 |
| GluI | GCNGC | 9 cut(s) | 231, 317, 682, 1108, 1125, 1128, 1305, 1416, 1425 |
| GsaI | CCCAGC | 2 cut(s) | 578, 1311 |
| GsuI | CTGGAG | 1 cut(s) | 1140 |
| HaeIII | GGCC | 4 cut(s) | 89, 233, 704, 1479 |
| HapII | CCGG | 2 cut(s) | 54, 309 |
| Hin1II | CATG | 7 cut(s) | 142, 329, 552, 823, 1304, 1388, 1510 |
| HincII | GTYRAC | 1 cut(s) | 931 |
| HindII | GTYRAC | 1 cut(s) | 931 |
| HindIII | AAGCTT | 2 cut(s) | 236, 893 |
| HinfI | GANTC | 2 cut(s) | 932, 1155 |
| HpaII | CCGG | 2 cut(s) | 54, 309 |
| HphI | GGTGA | 3 cut(s) | 85, 286, 1087 |
| Hpy166II | GTNNAC | 3 cut(s) | 554, 931, 1078 |
| Hpy188I | TCNGA | 2 cut(s) | 439, 923 |
| Hpy188III | TCNNGA | 3 cut(s) | 181, 343, 1225 |
| Hpy8I | GTNNAC | 3 cut(s) | 554, 931, 1078 |
| HpyAV | CCTTC | 6 cut(s) | 25, 250, 425, 694, 983, 1391 |
| HpyCH4III | ACNGT | 8 cut(s) | 191, 638, 643, 763, 871, 1012, 1220, 1435 |
| HpyCH4IV | ACGT | 2 cut(s) | 450, 601 |
| HpyF3I | CTNAG | 4 cut(s) | 438, 940, 1019, 1392 |
| HpySE526I | ACGT | 2 cut(s) | 450, 601 |
| Hsp92II | CATG | 7 cut(s) | 142, 329, 552, 823, 1304, 1388, 1510 |
| Kzo9I | GATC | 4 cut(s) | 366, 916, 1189, 1447 |
| LmnI | GCTCC | 2 cut(s) | 334, 1121 |
| Lsp1109I | GCAGC | 7 cut(s) | 303, 693, 1111, 1139, 1316, 1402, 1411 |
| LweI | GCATC | 4 cut(s) | 364, 535, 661, 1411 |
| MaeII | ACGT | 2 cut(s) | 450, 601 |
| MaeIII | GTNAC | 5 cut(s) | 178, 809, 967, 995, 1387 |
| MalI | GATC | 4 cut(s) | 368, 918, 1191, 1449 |
| MbiI | CCGCTC | 1 cut(s) | 1061 |
| MboI | GATC | 4 cut(s) | 366, 916, 1189, 1447 |
| MboII | GAAGA | 8 cut(s) | 88, 409, 428, 489, 530, 991, 998, 1275 |
| MfeI | CAATTG | 1 cut(s) | 402 |
| MhlI | GDGCHC | 1 cut(s) | 42 |
| MlyI | GAGTC | 2 cut(s) | 926, 1164 |
| MmeI | TCCRAC | 1 cut(s) | 1167 |
| Mph1103I | ATGCAT | 1 cut(s) | 550 |
| MseI | TTAA | 5 cut(s) | 393, 585, 662, 767, 1263 |
| MslI | CAYNNNNRTG | 3 cut(s) | 200, 360, 801 |
| MspA1I | CMGCKG | 1 cut(s) | 1307 |
| MspI | CCGG | 2 cut(s) | 54, 309 |
| MspR9I | CCNGG | 2 cut(s) | 1119, 1150 |
| MunI | CAATTG | 1 cut(s) | 402 |
| MvaI | CCWGG | 2 cut(s) | 1119, 1150 |
| NdeII | GATC | 4 cut(s) | 366, 916, 1189, 1447 |
| NlaIII | CATG | 7 cut(s) | 142, 329, 552, 823, 1304, 1388, 1510 |
| NlaIV | GGNNCC | 5 cut(s) | 130, 193, 1233, 1379, 1493 |
| NmeAIII | GCCGAG | 2 cut(s) | 355, 805 |
| NmuCI | GTSAC | 1 cut(s) | 178 |
| NsiI | ATGCAT | 1 cut(s) | 550 |
| NspI | RCATGY | 3 cut(s) | 329, 552, 1304 |
| OliI | CACNNNNGTG | 1 cut(s) | 200 |
| PaeI | GCATGC | 1 cut(s) | 329 |
| PaeR7I | CTCGAG | 1 cut(s) | 212 |
| PceI | AGGCCT | 1 cut(s) | 89 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 862 |
| PflFI | GACNNNGTC | 1 cut(s) | 935 |
| PfoI | TCCNGGA | 1 cut(s) | 1117 |
| PkrI | GCNGC | 9 cut(s) | 232, 318, 683, 1109, 1126, 1129, 1306, 1417, 1426 |
| PleI | GAGTC | 2 cut(s) | 926, 1163 |
| PpsI | GAGTC | 2 cut(s) | 926, 1163 |
| Ppu21I | YACGTR | 1 cut(s) | 602 |
| PpuMI | RGGWCCY | 1 cut(s) | 1378 |
| PsiI | TTATAA | 1 cut(s) | 1457 |
| Psp5II | RGGWCCY | 1 cut(s) | 1378 |
| Psp6I | CCWGG | 2 cut(s) | 1117, 1148 |
| PspFI | CCCAGC | 2 cut(s) | 574, 1307 |
| PspGI | CCWGG | 2 cut(s) | 1117, 1148 |
| PspN4I | GGNNCC | 5 cut(s) | 130, 193, 1233, 1379, 1493 |
| PspPI | GGNCC | 4 cut(s) | 128, 1378, 1478, 1492 |
| PspPPI | RGGWCCY | 1 cut(s) | 1378 |
| PspXI | VCTCGAGB | 1 cut(s) | 212 |
| PstI | CTGCAG | 3 cut(s) | 1129, 1420, 1504 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1133, 1424 |
| PsyI | GACNNNGTC | 1 cut(s) | 935 |
| PvuII | CAGCTG | 1 cut(s) | 1307 |
| RsaI | GTAC | 6 cut(s) | 11, 600, 640, 868, 1030, 1437 |
| RsaNI | GTAC | 6 cut(s) | 10, 599, 639, 867, 1029, 1436 |
| RseI | CAYNNNNRTG | 3 cut(s) | 200, 360, 801 |
| SaqAI | TTAA | 5 cut(s) | 393, 585, 662, 767, 1263 |
| SatI | GCNGC | 9 cut(s) | 231, 317, 682, 1108, 1125, 1128, 1305, 1416, 1425 |
| Sau3AI | GATC | 4 cut(s) | 366, 916, 1189, 1447 |
| Sau96I | GGNCC | 4 cut(s) | 128, 1378, 1478, 1492 |
| SbfI | CCTGCAGG | 1 cut(s) | 1504 |
| ScaI | AGTACT | 1 cut(s) | 1030 |
| SchI | GAGTC | 2 cut(s) | 926, 1164 |
| ScrFI | CCNGG | 2 cut(s) | 1119, 1150 |
| SdaI | CCTGCAGG | 1 cut(s) | 1504 |
| SduI | GDGCHC | 1 cut(s) | 42 |
| SfaNI | GCATC | 4 cut(s) | 364, 535, 661, 1411 |
| SfcI | CTRYAG | 5 cut(s) | 642, 1125, 1200, 1416, 1500 |
| Sfr274I | CTCGAG | 1 cut(s) | 212 |
| SinI | GGWCC | 3 cut(s) | 128, 1378, 1492 |
| SlaI | CTCGAG | 1 cut(s) | 212 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 200, 360, 801 |
| SmlI | CTYRAG | 2 cut(s) | 212, 1406 |
| SmoI | CTYRAG | 2 cut(s) | 212, 1406 |
| SphI | GCATGC | 1 cut(s) | 329 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1504 |
| SseBI | AGGCCT | 1 cut(s) | 89 |
| SsiI | CCGC | 5 cut(s) | 68, 230, 1061, 1108, 1256 |
| StuI | AGGCCT | 1 cut(s) | 89 |
| StyD4I | CCNGG | 2 cut(s) | 1117, 1148 |
| StyI | CCWWGG | 3 cut(s) | 705, 753, 1481 |
| TaaI | ACNGT | 8 cut(s) | 191, 638, 643, 763, 871, 1012, 1220, 1435 |
| TaiI | ACGT | 2 cut(s) | 453, 604 |
| TaqI | TCGA | 4 cut(s) | 84, 213, 649, 1224 |
| TaqII | GACCGA | 1 cut(s) | 116 |
| TatI | WGTACW | 3 cut(s) | 638, 1028, 1435 |
| TauI | GCSGC | 2 cut(s) | 233, 1110 |
| Tru1I | TTAA | 5 cut(s) | 393, 585, 662, 767, 1263 |
| Tru9I | TTAA | 5 cut(s) | 393, 585, 662, 767, 1263 |
| TscAI | CASTG | 1 cut(s) | 1438 |
| TseFI | GTSAC | 1 cut(s) | 178 |
| TseI | GCWGC | 7 cut(s) | 316, 681, 1124, 1127, 1304, 1415, 1424 |
| Tsp45I | GTSAC | 1 cut(s) | 178 |
| TspDTI | ATGAA | 7 cut(s) | 78, 155, 222, 497, 761, 999, 1373 |
| TspGWI | ACGGA | 1 cut(s) | 27 |
| TspRI | CASTG | 1 cut(s) | 1438 |
| Tth111I | GACNNNGTC | 1 cut(s) | 935 |
| VpaK11BI | GGWCC | 3 cut(s) | 128, 1378, 1492 |
| XapI | RAATTY | 2 cut(s) | 842, 1208 |
| XceI | RCATGY | 3 cut(s) | 329, 552, 1304 |
| XhoI | CTCGAG | 1 cut(s) | 212 |
| XmiI | GTMKAC | 1 cut(s) | 553 |
| ZrmI | AGTACT | 1 cut(s) | 1030 |
| Zsp2I | ATGCAT | 1 cut(s) | 550 |