RchiOBHm_Chr7g0215241

Long-chain-alcohol oxidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0015043
Physical Location & Seq
Forward (+)
32740313 .. 32744547
4235 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2358 bp
ATGGAGCAAAGTGAAAATGAAAAACATGCAGAAGATATTGAGCTTGGAGGCGTTGATGCAAAGAAGCTTGTTGGAGGATTTGTGTACCCAAACTCTCTCTCGTCCCGTGAAATGGAGTCGCTCACTGCCCTTTGTGACACCATCTTGCCCTCTATAGACGTCTCCGGTGACGCAAGCACTTGCACCGATGAGTCCTTGATCACGTTTTACCGGACATCAGCGTCCATGGCAGGAACACCAGATCGACTAGGGGGTTTGATAAGTGAGAGGCTAGAGCATCCAATGAAGTGGTTGATGCGATTATCATTATGGCTCTTGTCAACATGGATAGGAACCTTCATATTATGTGGAAGAGGCAGCTTGTCAACCCAATTTCCCTACTTTCGGAGTTTTGCCCAAGTTTCTCAGCAGAAACGAGAACAGATAGTGGTGTCATGGTCTCTCAGTTACTTTCATCTCCTTCGGATGTTCTTCAAGACCATCAAGCTTCTCACTCTCCTCGTCTTCTTCACTCAAGTGGATGAGAATGAGGAGAACCTATCTTGGAAAGCAATTGGCTACACGGGACCTGATCCAGATATCCTTAACAAAACCAATCTATCAACAGCATTGACAAGAAACGGATATGAAAGACCAGACACTGAAGAACAAGAATATCAAAGAACTTACAAAGAAGAATTCTTTGGACCTCTTTACCATGGCATCATCAATTTGAGCAAACCAAAGGATGTAGTTGCCAATAGTCTAATGAGATTTGGAATTCCAGTCTCCGTTATTTACTCCCCAAAAACATCGTCTGACCCTTCTTTAATTTTCCGATGCGATGCTGTAGTAATTGGTTCAGGCTCTGGCGGTGGTGTTGTTGCTGGCGTTCTGGCCAAGGCTGGTTACAAAGTGATCGTTTTGGACAAGGGAGACTATCATGCCAGAAAGAACCTTACACTTCTTGAAGGACCCACAATGGATCAAATGTACCTATCAGGAGGTTTGGTTGCAACTGATGATATGGGGGTTTTACTACTTGCTGGCTCCACTGTTGGTGGAGGCTCTACAATCAACTGGTCAGCCTCAATTCGAACACCTCAGCATGTAAGTAGCGAATGGTACAATCACCATGGGCTAGAACTGTTCGACAGTCAACTATATCAAGAAGCCATGGATATTGTCTGCCAACGAATGGGAGTTCAATCTGACATACATGAAGAAGGATTCAGCAATGCTGTTTTGAGAAGAGGGTGCCAAGAATTGGGGTATCCTGTACATAATATTCCTCGAAACGCAGGACCAGATCACTATTGTGGTTGGTGCTGCCTCGGCTGCAAGGATGGAAGCAAAAAGGGTACATCAGAGACATGGCTGGTGGACTTAGTTCGTTCAGGAAACGGTGCAATTTTTTCAGGATGCGAGGCTATAAAAGTATTGCATACGAGAACGAAAGGTAGAGCTCGAAACGCAGCTACTGGAGTCATGTTTGAATTTAAACATGAAGGAGCAAAACAAGTCTGTGTGGTGGAATCTAAGGTCACAATTGTTGCTTGCGGTGCTCTCAGTACTCCAATATTGTTGAATCGAAGCGGATTGAAGAATGCCAATATTGGAAAAAATTTACATCTACATCCAGTTGCAATGGCATGGGGCTATTTTAATAATCCAGATTCACCTAATCTCTCTGAGAAAAAGAGCTACGAAGGAGGGATAATGACAGCAATGTCTACTGTCACTGCAGATTTTGACAGGTCTGGCTATGGAGCGTTGATACAAACACCTGCATTGCACCCTGGTATGTTCTCAATTGTAATGCCATGGATTTCAGGCAAAGATATAAAGCACCGAATGAGCAAGTTCTCTAAAACTGCCCATATATTTGCATTGGCAAGAGATAAAGGATCGGGGACAGTACTAACAAATGCACCAAACTCAGTCAGCTATCAAATGGAACCCGTTGACGAAAACAATCTAAACAGAGGACTTGAGAAGTCATTGAGGATTTTGGCGGCAGCGGGAGCTGAAGAAATTGGAACCCATCATTTCAAAGGGAAGAGTTTAAACGTGAAGAAGGCAAGTTCTGGTGAATTTGAGCAGTTTGTGAAAGAGGAGAGTTCGAGGCCATTAAGAGACATTTCATCTAGCATCTGCTCTGCGCATCAGATGGGAAGTTGCAGAATGGGGGTCAACGCAAAAGGGTCGGTAGTCAACCAGATGGGAGAGACGTGGGAAGTTGAGGGACTATTTGTAGCAGACTCGAGTGTTTTCCCAACGGCTTTGGGAGTCAATCCTATGGTTACTGTTCAGTGTATTGCTTACTGCACTGCGCAATCTGTTATTCAAGTGCTTCAGAGAAGAAAGCCGGATGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008150 GO:0008152 GO:0016491 GO:0044464 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GMC_oxred_C GMC_oxred_N

Protein Analysis

785

Amino Acids

85.96

Weight (kDa)

6.73

Isoelectric Point (pI)

32.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_N PF00732 321 - 541 4.8e-69 GMC oxidoreductase
GMC_oxred_C PF05199 641 - 767 1.1e-21 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015043)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19380 AT4G19380
malus_domestica MD16G1286200.v1.1
prunus_persica Prupe.5G013900_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0215241
rosa_laevigata RLG00000002680
rosa_multiflora Rmu_co8143572.1_g000001 Rmu_co8276433.1_g000001
rosa_roxburghii Rroxscaffold_3G00244400
rosa_rugosa Rorug07G0151400
rosa_samantha Rh7AG288100 Rh7BG280000 Rh7BG280100 Rh7CG307900 Rh7DG291600
rosa_wichuraiana Rw7G024610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1774
AasI GACNNNNNNGTC 2 cut(s) 220, 1708
AatII GACGTC 1 cut(s) 162
Acc16I TGCGCA 2 cut(s) 2142, 2313
Acc36I ACCTGC 1 cut(s) 1774
AccB1I GGYRCC 1 cut(s) 1236
AccB7I CCANNNNNTGG 2 cut(s) 1177, 1246
AccI GTMKAC 1 cut(s) 1712
AciI CCGC 5 cut(s) 852, 1539, 1575, 1994, 2000
AclWI GGATC 3 cut(s) 566, 972, 1894
AcoI YGGCCR 1 cut(s) 876
AcsI RAATTY 5 cut(s) 677, 759, 1475, 1603, 2072
AcuI CTGAAG 3 cut(s) 663, 2028, 2318
AcyI GRCGYC 1 cut(s) 159
AfaI GTAC 7 cut(s) 86, 974, 1106, 1260, 1342, 1552, 1899
AfiI CCNNNNNNNGG 4 cut(s) 112, 384, 1177, 1246
AgsI TTSAA 8 cut(s) 475, 950, 1187, 1475, 1567, 1582, 2032, 2327
AjiI CACGTC 1 cut(s) 2211
AjnI CCWGG 1 cut(s) 1777
AjuI GAANNNNNNNTTGG 2 cut(s) 666, 698
AleI CACNNNNGTG 2 cut(s) 515, 1296
AluBI AGCT 9 cut(s) 43, 67, 360, 487, 1445, 1457, 1683, 1926, 2006
AluI AGCT 9 cut(s) 43, 67, 360, 487, 1445, 1457, 1683, 1926, 2006
Alw21I GWGCWC 2 cut(s) 1447, 1546
Alw26I GTCTC 7 cut(s) 166, 444, 772, 909, 1343, 2109, 2201
AlwI GGATC 3 cut(s) 566, 972, 1894
AlwNI CAGNNNCTG 3 cut(s) 641, 848, 1460
Ama87I CYCGRG 1 cut(s) 2242
AoxI GGCC 2 cut(s) 876, 2105
ApeKI GCWGC 5 cut(s) 357, 1308, 1317, 1454, 1997
ApoI RAATTY 5 cut(s) 677, 759, 1475, 1603, 2072
ArsI GACNNNNNNTTYG 2 cut(s) 779, 811
AspLEI GCGC 2 cut(s) 2143, 2314
AspS9I GGNCC 4 cut(s) 566, 686, 953, 1283
AsuHPI GGTGA 4 cut(s) 179, 1103, 1650, 2081
AsuII TTCGAA 1 cut(s) 1075
AvaI CYCGRG 1 cut(s) 2242
AvaII GGWCC 4 cut(s) 566, 686, 953, 1283
BalI TGGCCA 1 cut(s) 878
BanI GGYRCC 1 cut(s) 1236
BanII GRGCYC 1 cut(s) 1447
BbsI GAAGAC 1 cut(s) 496
Bbv12I GWGCWC 2 cut(s) 1447, 1546
BbvCI CCTCAGC 1 cut(s) 1083
BbvI GCAGC 5 cut(s) 369, 1295, 1304, 1466, 2009
BccI CCATC 6 cut(s) 149, 488, 1319, 2031, 2143, 2194
BceAI ACGGC 1 cut(s) 2274
BcgI CGANNNNNNTGC 2 cut(s) 2166, 2200
BciT130I CCWGG 1 cut(s) 1779
BciVI GTATCC 1 cut(s) 1263
BclI TGATCA 1 cut(s) 198
BcoDI GTCTC 7 cut(s) 166, 444, 772, 909, 1343, 2109, 2201
BfaI CTAG 4 cut(s) 248, 272, 1121, 2127
BfmI CTRYAG 3 cut(s) 153, 828, 1722
BfuAI ACCTGC 1 cut(s) 1774
BfuI GTATCC 1 cut(s) 1263
BisI GCNGC 6 cut(s) 358, 1309, 1318, 1455, 1995, 1998
BlsI GCNGC 6 cut(s) 359, 1310, 1319, 1456, 1996, 1999
BmcAI AGTACT 2 cut(s) 1552, 1899
Bme1390I CCNGG 1 cut(s) 1779
Bme18I GGWCC 4 cut(s) 566, 686, 953, 1283
BmeT110I CYCGRG 1 cut(s) 2242
BmgBI CACGTC 1 cut(s) 2211
BmgT120I GGNCC 4 cut(s) 566, 686, 953, 1283
BmiI GGNNCC 7 cut(s) 334, 567, 955, 1030, 1238, 1938, 2020
BmrFI CCNGG 1 cut(s) 1779
BmsI GCATC 9 cut(s) 46, 285, 286, 711, 809, 814, 1391, 2139, 2152
BpiI GAAGAC 1 cut(s) 496
BpmI CTGGAG 1 cut(s) 1482
Bpu10I CCTNAGC 1 cut(s) 1083
Bpu14I TTCGAA 1 cut(s) 1075
BpuEI CTTGAG 2 cut(s) 498, 1991
BsaHI GRCGYC 1 cut(s) 159
BsaI GGTCTC 1 cut(s) 444
BsaJI CCNNGG 8 cut(s) 225, 697, 879, 1114, 1155, 1312, 1777, 1802
BsaWI WCCGGW 2 cut(s) 164, 210
BsaXI ACNNNNNCTCC 4 cut(s) 66, 96, 975, 1005
Bsc4I CCNNNNNNNGG 4 cut(s) 112, 384, 1177, 1246
Bse1I ACTGG 4 cut(s) 764, 1064, 1465, 1619
Bse3DI GCAATG 4 cut(s) 1222, 1632, 1713, 1769
BseBI CCWGG 1 cut(s) 1779
BseDI CCNNGG 8 cut(s) 225, 697, 879, 1114, 1155, 1312, 1777, 1802
BseGI GGATG 8 cut(s) 277, 471, 526, 733, 1330, 1406, 1615, 2356
BseLI CCNNNNNNNGG 4 cut(s) 112, 384, 1177, 1246
BseMI GCAATG 4 cut(s) 1222, 1632, 1713, 1769
BseMII CTCAG 6 cut(s) 419, 457, 1097, 1561, 1662, 1932
BseNI ACTGG 4 cut(s) 764, 1064, 1465, 1619
BseRI GAGGAG 3 cut(s) 488, 545, 2108
BseXI GCAGC 5 cut(s) 369, 1295, 1304, 1466, 2009
BsgI GTGCAG 1 cut(s) 2290
BshFI GGCC 2 cut(s) 878, 2107
BshNI GGYRCC 1 cut(s) 1236
BsiHKAI GWGCWC 2 cut(s) 1447, 1546
BsiHKCI CYCGRG 1 cut(s) 2242
BsiSI CCGG 3 cut(s) 165, 211, 2348
BslFI GGGAC 4 cut(s) 88, 579, 1906, 2238
BslI CCNNNNNNNGG 4 cut(s) 112, 384, 1177, 1246
BsmAI GTCTC 7 cut(s) 166, 444, 772, 909, 1343, 2109, 2201
BsmBI CGTCTC 2 cut(s) 166, 2201
BsmFI GGGAC 4 cut(s) 88, 579, 1906, 2238
BsmI GAATGC 1 cut(s) 1591
BsnI GGCC 2 cut(s) 878, 2107
Bso31I GGTCTC 1 cut(s) 444
BsoBI CYCGRG 1 cut(s) 2242
Bsp119I TTCGAA 1 cut(s) 1075
Bsp1286I GDGCHC 2 cut(s) 1447, 1546
Bsp1407I TGTACA 1 cut(s) 1258
Bsp143I GATC 7 cut(s) 198, 241, 571, 897, 964, 1288, 1886
Bsp19I CCATGG 5 cut(s) 225, 697, 1114, 1155, 1802
BspACI CCGC 5 cut(s) 852, 1539, 1575, 1994, 2000
BspANI GGCC 2 cut(s) 878, 2107
BspCNI CTCAG 6 cut(s) 418, 456, 1096, 1560, 1663, 1931
BspLI GGNNCC 7 cut(s) 334, 567, 955, 1030, 1238, 1938, 2020
BspMAI CTGCAG 1 cut(s) 1726
BspMI ACCTGC 1 cut(s) 1774
BspPI GGATC 3 cut(s) 566, 972, 1894
BspT104I TTCGAA 1 cut(s) 1075
BspT107I GGYRCC 1 cut(s) 1236
BspTNI GGTCTC 1 cut(s) 444
BsrDI GCAATG 4 cut(s) 1222, 1632, 1713, 1769
BsrGI TGTACA 1 cut(s) 1258
BsrI ACTGG 4 cut(s) 764, 1064, 1465, 1619
BssECI CCNNGG 8 cut(s) 225, 697, 879, 1114, 1155, 1312, 1777, 1802
BssMI GATC 7 cut(s) 198, 241, 571, 897, 964, 1288, 1886
BssNI GRCGYC 1 cut(s) 159
BssT1I CCWWGG 6 cut(s) 225, 697, 879, 1114, 1155, 1802
Bst2UI CCWGG 1 cut(s) 1779
Bst4CI ACNGT 7 cut(s) 1036, 1128, 1136, 1385, 1717, 1897, 2287
Bst6I CTCTTC 3 cut(s) 346, 1225, 2033
BstACI GRCGYC 1 cut(s) 159
BstAUI TGTACA 1 cut(s) 1258
BstBI TTCGAA 1 cut(s) 1075
BstC8I GCNNGC 4 cut(s) 175, 868, 1027, 1537
BstDEI CTNAG 8 cut(s) 405, 443, 1083, 1366, 1518, 1547, 1671, 1918
BstDSI CCRYGG 5 cut(s) 225, 697, 1114, 1155, 1802
BstF5I GGATG 8 cut(s) 277, 471, 526, 733, 1330, 1406, 1615, 2356
BstHHI GCGC 2 cut(s) 2143, 2314
BstKTI GATC 7 cut(s) 201, 244, 574, 900, 967, 1291, 1889
BstMAI GTCTC 7 cut(s) 166, 444, 772, 909, 1343, 2109, 2201
BstMBI GATC 7 cut(s) 198, 241, 571, 897, 964, 1288, 1886
BstMWI GCNNNNNNNGC 6 cut(s) 227, 1314, 1317, 1451, 1541, 2003
BstNI CCWGG 1 cut(s) 1779
BstNSI RCATGY 2 cut(s) 29, 1091
BstSCI CCNGG 1 cut(s) 1777
BstSFI CTRYAG 3 cut(s) 153, 828, 1722
BstV1I GCAGC 5 cut(s) 369, 1295, 1304, 1466, 2009
BstV2I GAAGAC 1 cut(s) 496
BstXI CCANNNNNNTGG 1 cut(s) 288
BsuI GTATCC 1 cut(s) 1263
BsuRI GGCC 2 cut(s) 878, 2107
BtgI CCRYGG 5 cut(s) 225, 697, 1114, 1155, 1802
BtgZI GCGATG 1 cut(s) 837
BtrI CACGTC 1 cut(s) 2211
BtsCI GGATG 8 cut(s) 277, 471, 526, 733, 1330, 1406, 1615, 2356
BtsI GCAGTG 3 cut(s) 123, 1719, 2307
BtsIMutI CAGTG 6 cut(s) 123, 639, 1032, 1719, 2297, 2307
BveI ACCTGC 1 cut(s) 1774
Cac8I GCNNGC 4 cut(s) 175, 868, 1027, 1537
CaiI CAGNNNCTG 3 cut(s) 641, 848, 1460
CfoI GCGC 2 cut(s) 2143, 2314
Cfr13I GGNCC 4 cut(s) 566, 686, 953, 1283
CseI GACGC 2 cut(s) 179, 210
Csp6I GTAC 7 cut(s) 85, 973, 1105, 1259, 1341, 1551, 1898
CviQI GTAC 7 cut(s) 85, 973, 1105, 1259, 1341, 1551, 1898
DdeI CTNAG 8 cut(s) 405, 443, 1083, 1366, 1518, 1547, 1671, 1918
DpnI GATC 7 cut(s) 200, 243, 573, 899, 966, 1290, 1888
DpnII GATC 7 cut(s) 198, 241, 571, 897, 964, 1288, 1886
DraI TTTAAA 2 cut(s) 1480, 2046
DrdI GACNNNNNNGTC 2 cut(s) 220, 1708
DseDI GACNNNNNNGTC 2 cut(s) 220, 1708
EaeI YGGCCR 1 cut(s) 876
Eam1104I CTCTTC 3 cut(s) 346, 1225, 2033
EarI CTCTTC 3 cut(s) 346, 1225, 2033
Ecl136II GAGCTC 1 cut(s) 1445
Eco130I CCWWGG 6 cut(s) 225, 697, 879, 1114, 1155, 1802
Eco24I GRGCYC 1 cut(s) 1447
Eco31I GGTCTC 1 cut(s) 444
Eco32I GATATC 1 cut(s) 580
Eco47I GGWCC 4 cut(s) 566, 686, 953, 1283
Eco53kI GAGCTC 1 cut(s) 1445
Eco57I CTGAAG 3 cut(s) 663, 2028, 2318
Eco88I CYCGRG 1 cut(s) 2242
EcoICRI GAGCTC 1 cut(s) 1445
EcoO109I RGGNCCY 2 cut(s) 566, 953
EcoRI GAATTC 2 cut(s) 677, 759
EcoRII CCWGG 1 cut(s) 1777
EcoRV GATATC 1 cut(s) 580
EcoT14I CCWWGG 6 cut(s) 225, 697, 879, 1114, 1155, 1802
EcoT38I GRGCYC 1 cut(s) 1447
ErhI CCWWGG 6 cut(s) 225, 697, 879, 1114, 1155, 1802
Esp3I CGTCTC 2 cut(s) 166, 2201
FaqI GGGAC 4 cut(s) 88, 579, 1906, 2238
FauI CCCGC 1 cut(s) 1993
FbaI TGATCA 1 cut(s) 198
FblI GTMKAC 1 cut(s) 1712
Fnu4HI GCNGC 6 cut(s) 358, 1309, 1318, 1455, 1995, 1998
FokI GGATG 7 cut(s) 264, 478, 533, 740, 1337, 1413, 1602
FriOI GRGCYC 1 cut(s) 1447
Fsp4HI GCNGC 6 cut(s) 358, 1309, 1318, 1455, 1995, 1998
FspBI CTAG 4 cut(s) 248, 272, 1121, 2127
FspI TGCGCA 2 cut(s) 2142, 2313
GlaI GCGC 2 cut(s) 2142, 2313
GluI GCNGC 6 cut(s) 358, 1309, 1318, 1455, 1995, 1998
GsuI CTGGAG 1 cut(s) 1482
HaeIII GGCC 2 cut(s) 878, 2107
HapII CCGG 3 cut(s) 165, 211, 2348
HgaI GACGC 2 cut(s) 179, 210
HhaI GCGC 2 cut(s) 2143, 2314
Hin1I GRCGYC 1 cut(s) 159
Hin6I GCGC 2 cut(s) 2141, 2312
HinP1I GCGC 2 cut(s) 2141, 2312
HincII GTYRAC 6 cut(s) 321, 366, 1139, 1945, 2173, 2194
HindII GTYRAC 6 cut(s) 321, 366, 1139, 1945, 2173, 2194
HindIII AAGCTT 2 cut(s) 65, 485
HinfI GANTC 9 cut(s) 116, 191, 1209, 1464, 1514, 1567, 1655, 2240, 2268
HpaII CCGG 3 cut(s) 165, 211, 2348
HphI GGTGA 4 cut(s) 179, 1103, 1650, 2081
Hpy166II GTNNAC 9 cut(s) 85, 321, 366, 1139, 1363, 1713, 1945, 2173, 2194
Hpy188I TCNGA 9 cut(s) 387, 465, 799, 818, 1192, 1348, 1672, 2148, 2337
Hpy188III TCNNGA 8 cut(s) 475, 575, 947, 981, 1148, 1377, 1398, 1652
Hpy8I GTNNAC 9 cut(s) 85, 321, 366, 1139, 1363, 1713, 1945, 2173, 2194
HpyAV CCTTC 8 cut(s) 346, 470, 813, 944, 1199, 1481, 1682, 2050
HpyCH4III ACNGT 7 cut(s) 1036, 1128, 1136, 1385, 1717, 1897, 2287
HpyCH4IV ACGT 4 cut(s) 159, 203, 2049, 2210
HpyF10VI GCNNNNNNNGC 6 cut(s) 227, 1314, 1317, 1451, 1541, 2003
HpyF3I CTNAG 8 cut(s) 405, 443, 1083, 1366, 1518, 1547, 1671, 1918
HpySE526I ACGT 4 cut(s) 159, 203, 2049, 2210
Hsp92I GRCGYC 1 cut(s) 159
HspAI GCGC 2 cut(s) 2141, 2312
Ksp22I TGATCA 1 cut(s) 198
Kzo9I GATC 7 cut(s) 198, 241, 571, 897, 964, 1288, 1886
LmnI GCTCC 5 cut(s) 4, 1034, 1490, 1748, 2003
Lsp1109I GCAGC 5 cut(s) 369, 1295, 1304, 1466, 2009
LweI GCATC 9 cut(s) 46, 285, 286, 711, 809, 814, 1391, 2139, 2152
MaeI CTAG 4 cut(s) 248, 272, 1121, 2127
MaeII ACGT 4 cut(s) 159, 203, 2049, 2210
MaeIII GTNAC 7 cut(s) 134, 167, 446, 887, 1522, 1717, 2281
MalI GATC 7 cut(s) 200, 243, 573, 899, 966, 1290, 1888
MboI GATC 7 cut(s) 198, 241, 571, 897, 964, 1288, 1886
MfeI CAATTG 3 cut(s) 552, 1527, 1791
MhlI GDGCHC 2 cut(s) 1447, 1546
MlsI TGGCCA 1 cut(s) 878
MluNI TGGCCA 1 cut(s) 878
MlyI GAGTC 5 cut(s) 125, 200, 1473, 2234, 2277
MmeI TCCRAC 1 cut(s) 52
Mox20I TGGCCA 1 cut(s) 878
MscI TGGCCA 1 cut(s) 878
MseI TTAA 6 cut(s) 585, 809, 1479, 1644, 2045, 2111
MslI CAYNNNNRTG 2 cut(s) 515, 1296
Msp20I TGGCCA 1 cut(s) 878
MspA1I CMGCKG 1 cut(s) 2000
MspI CCGG 3 cut(s) 165, 211, 2348
MspR9I CCNGG 1 cut(s) 1779
MssI GTTTAAAC 1 cut(s) 2046
MunI CAATTG 3 cut(s) 552, 1527, 1791
Mva1269I GAATGC 1 cut(s) 1591
MvaI CCWGG 1 cut(s) 1779
MwoI GCNNNNNNNGC 6 cut(s) 227, 1314, 1317, 1451, 1541, 2003
NcoI CCATGG 5 cut(s) 225, 697, 1114, 1155, 1802
NdeII GATC 7 cut(s) 198, 241, 571, 897, 964, 1288, 1886
NlaIV GGNNCC 7 cut(s) 334, 567, 955, 1030, 1238, 1938, 2020
NmeAIII GCCGAG 1 cut(s) 1293
NmuCI GTSAC 4 cut(s) 134, 167, 1522, 1717
NsbI TGCGCA 2 cut(s) 2142, 2313
NspI RCATGY 2 cut(s) 29, 1091
NspV TTCGAA 1 cut(s) 1075
OliI CACNNNNGTG 2 cut(s) 515, 1296
PaeR7I CTCGAG 1 cut(s) 2242
PaqCI CACCTGC 1 cut(s) 1774
PctI GAATGC 1 cut(s) 1591
PfeI GAWTC 4 cut(s) 1209, 1514, 1567, 1655
PflMI CCANNNNNTGG 2 cut(s) 1177, 1246
PkrI GCNGC 6 cut(s) 359, 1310, 1319, 1456, 1996, 1999
PleI GAGTC 5 cut(s) 124, 199, 1472, 2234, 2276
PmeI GTTTAAAC 1 cut(s) 2046
PpsI GAGTC 5 cut(s) 124, 199, 1472, 2234, 2276
PpuMI RGGWCCY 2 cut(s) 566, 953
Psp124BI GAGCTC 1 cut(s) 1447
Psp5II RGGWCCY 2 cut(s) 566, 953
Psp6I CCWGG 1 cut(s) 1777
PspGI CCWGG 1 cut(s) 1777
PspN4I GGNNCC 7 cut(s) 334, 567, 955, 1030, 1238, 1938, 2020
PspPI GGNCC 4 cut(s) 566, 686, 953, 1283
PspPPI RGGWCCY 2 cut(s) 566, 953
PspXI VCTCGAGB 1 cut(s) 2242
PstI CTGCAG 1 cut(s) 1726
PstNI CAGNNNCTG 3 cut(s) 641, 848, 1460
RsaI GTAC 7 cut(s) 86, 974, 1106, 1260, 1342, 1552, 1899
RsaNI GTAC 7 cut(s) 85, 973, 1105, 1259, 1341, 1551, 1898
RseI CAYNNNNRTG 2 cut(s) 515, 1296
SacI GAGCTC 1 cut(s) 1447
SaqAI TTAA 6 cut(s) 585, 809, 1479, 1644, 2045, 2111
SatI GCNGC 6 cut(s) 358, 1309, 1318, 1455, 1995, 1998
Sau3AI GATC 7 cut(s) 198, 241, 571, 897, 964, 1288, 1886
Sau96I GGNCC 4 cut(s) 566, 686, 953, 1283
ScaI AGTACT 2 cut(s) 1552, 1899
SchI GAGTC 5 cut(s) 125, 200, 1473, 2234, 2277
ScrFI CCNGG 1 cut(s) 1779
SduI GDGCHC 2 cut(s) 1447, 1546
SfaNI GCATC 9 cut(s) 46, 285, 286, 711, 809, 814, 1391, 2139, 2152
SfcI CTRYAG 3 cut(s) 153, 828, 1722
Sfr274I CTCGAG 1 cut(s) 2242
SfuI TTCGAA 1 cut(s) 1075
SinI GGWCC 4 cut(s) 566, 686, 953, 1283
SlaI CTCGAG 1 cut(s) 2242
SmiMI CAYNNNNRTG 2 cut(s) 515, 1296
SmlI CTYRAG 3 cut(s) 513, 1970, 2242
SmoI CTYRAG 3 cut(s) 513, 1970, 2242
SsiI CCGC 5 cut(s) 852, 1539, 1575, 1994, 2000
SspI AATATT 3 cut(s) 1267, 1560, 1594
SspMI CTAG 4 cut(s) 248, 272, 1121, 2127
SstI GAGCTC 1 cut(s) 1447
StyD4I CCNGG 1 cut(s) 1777
StyI CCWWGG 6 cut(s) 225, 697, 879, 1114, 1155, 1802
TaaI ACNGT 7 cut(s) 1036, 1128, 1136, 1385, 1717, 1897, 2287
TaiI ACGT 4 cut(s) 162, 206, 2052, 2213
TaqI TCGA 8 cut(s) 244, 1075, 1131, 1273, 1447, 1570, 2102, 2243
TatI WGTACW 3 cut(s) 1258, 1550, 1897
TauI GCSGC 1 cut(s) 1997
TfiI GAWTC 4 cut(s) 1209, 1514, 1567, 1655
Tru1I TTAA 6 cut(s) 585, 809, 1479, 1644, 2045, 2111
Tru9I TTAA 6 cut(s) 585, 809, 1479, 1644, 2045, 2111
TscAI CASTG 6 cut(s) 130, 646, 1039, 1726, 2297, 2314
TseFI GTSAC 4 cut(s) 134, 167, 1522, 1717
TseI GCWGC 5 cut(s) 357, 1308, 1317, 1454, 1997
Tsp45I GTSAC 4 cut(s) 134, 167, 1522, 1717
TspDTI ATGAA 8 cut(s) 33, 299, 328, 443, 642, 1215, 1500, 2112
TspGWI ACGGA 2 cut(s) 636, 760
TspRI CASTG 6 cut(s) 130, 646, 1039, 1726, 2297, 2314
Van91I CCANNNNNTGG 2 cut(s) 1177, 1246
VpaK11BI GGWCC 4 cut(s) 566, 686, 953, 1283
XapI RAATTY 5 cut(s) 677, 759, 1475, 1603, 2072
XceI RCATGY 2 cut(s) 29, 1091
XhoI CTCGAG 1 cut(s) 2242
XmiI GTMKAC 1 cut(s) 1712
XspI CTAG 4 cut(s) 248, 272, 1121, 2127
ZraI GACGTC 1 cut(s) 160
ZrmI AGTACT 2 cut(s) 1552, 1899
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.