RLG00000002680

Long-chain-alcohol oxidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0015043
Physical Location & Seq
Reverse (-)
38019663 .. 38024129
4467 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002680

Sequence Viewer

Length: 2358 bp
ATGGAGCAAAGTGAAAATGAAAAACATGCAGAAGATATTGAGCTTGGTGGTGTTGATGCAAAGAAGCTTATTGGAGGATTTGTGTACCCAAACTCTCTCTTGTCCCGTGAAATGGAGTCGCTCACTGCTCTTTGTGACACCATCTTGCCCTCCATAGACGTCTCCGGTGACGCAGCCACCTGCACCGATGAGTCCTTGATCATGTTTTACCGGACTTCAGCATCCATGGCAGGAACACCGGATCGACTAGGGGGTTTGATAAGTGAGAGGCTAGAGCATCCAATGAAGTGGTTGATGCGGTTATCATTATGGCTCTTGTCAACATGGATAGGAACCTTCATACTATGTGGAAGAGGCAGCTTGTCAACCAAATTTCCCTACTTTCGGAGTTTTGCTCAAGTTTCTCAGCAGAAACGAGAACAGATAGTGGTGTCATGGTCTCTCAGTTACTTTCATCTCCTTCGGATGTTCTTCAAGACCATCAAGCTTCTCACTCTCCTCGTCTTCTTCACTCAAGTGGATGAGAATGATGAGAACCTATCTTGGAAAGCAATTGGCTACACGGGACCTGATCCAGATATCCTTAACAAAACCAATCTATCAACAGCATCGACAAGAAACGGATATGAAAGACCAGACACTGAAGAACAAGAATATCAAAGGGCTTACAAAGAAGAATTCTTTGGACCTCTTTACCATGGCATCATCAATTTGAGCAAACCAAAGGATGTAGTTGCCAATAGTCTAATGAGATTTGGAATTCCAGTCTCCGTTATTTACTCGCCAAAAACATCCTCCGACCCTTCTTTAATTTTCCGATGCGATGCTGTAGTAATTGGTTCAGGCTCTGGCGGTGGTGTTGTTGCTGGCGTTCTGGCCAAGGCTGGTTACAAAGTGATCGTTTTGGACAAGGGAAACTATCATGCCAGGAAGAACCTTACACTTCTTGAAGGACCCACAATGGATCAAATGTACTTATCAGGAGGTTTGGTTGCAACTGATGATATGGGGGTTTTACTACTAGCTGGCTCCACTGTTGGTGGAGGCTCTACAATCAACTGGTCAGCCTCAATTCGAACACCTCAGCATGTAATTAGCGAATGGTGCAATCACCATGGGCTAGAACTGTTCGACAGTCAACTATATCAGGAAGCCATGGATATTGTCTGCCAACGAATGGGAGTTCAATCTGACATACATGAAGAAGGATTCAACAATGCTGTTTTGAGAAGAGGGTGCCAAGAATTGGGGTATCCTGTACATAATGTTCCTCGAAACGCAGGACCAGAACACTATTGTGGTTGGTGCTGCCTCGGCTGCAAGGATGGAAGCAAAAAGGGTACATCAGAGACATGGCTGGTGGACTTAGTTCGTTCAGGAAACGGTGCAATTTTTTCAGGATGCGAGGCTATAAAAGTATTGCATACGAGAACAAAAGGTAGAGCTCGAAACACAGCTACTGGAGTCGTGTTTGAATTCAAACATGAAGGAGCAAAACAAGTCTGTGTGGTGGAATCCAAGGTCACAATTGTTGCTTGCGGTGCTCTCAGTACTCCGATATTGTTGAATCGAAGCGGATTGAAGAATGCCAATATTGGAAAAAATTTACATCTACATCCAGTTGCAATGGCATGGGGCTATTTTAATAATCCAGATTCACCTAATCTCTCAGAGAAAAATACTTACGTAGGAGGGATAATGACAGCAATGTCTACTGTCACTGCAGATTTTGACAGGTCTGGCTATGGAGCGTTGATACAAACACCTGCATTGCACCCTGGCATGTTCTCAATTGTAATGCCATGGATTTCAGGCAAAGATATAAAGCACCGAATGAGCAGGTTCTCTAAAACTGCCCATATATTTGCATTGGCAAGAGATAAAGGATCGGGGACAGTACTGACAAATGCACCAAACTCAGTCAGCTATCAAATGGAACTTGTTGACGAAAACAATCTAAACAGGGGACTTGAGAAGTCATTGAGGATTTTGGCGGCAGCGGGAGCTGAAGAAATTGGAACCCATCATTTCAAAGGGAAGAGTTTAAATGTGAAGAAGGTAAGTTCGGGTGAGTTTGAGCAGTTTGTGAAAGAGGAGAGTTCGAGGCCATTAAGAGACATTGCATCTAGCATCTGCTCTGCGCATCAGATGGGAAGTTGCAGAATGGGAGTCAACGCGAAAGGGTCGGTAGTCAACCAGATGGGAGAGACGTGGGAAGTTGAGGGACTATTTGTAGCAGACTCGAGTGTTTTCCCAACGGCTTTGGGAGTCAATCCAATGGTTACTGTTCAGTGTATTGCTTACTGCACTGCGCAATCTGTTATTCAAATGCTTCAGAGAAGAAAGCCGGATGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008150 GO:0008152 GO:0016491 GO:0044464 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GMC_oxred_C GMC_oxred_N

Protein Analysis

786

Amino Acids

85.99

Weight (kDa)

7.05

Isoelectric Point (pI)

31.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_N PF00732 321 - 541 5.1e-69 GMC oxidoreductase
GMC_oxred_C PF05199 643 - 767 9.2e-21 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015043)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19380 AT4G19380
malus_domestica MD16G1286200.v1.1
prunus_persica Prupe.5G013900_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0215241
rosa_laevigata RLG00000002680
rosa_multiflora Rmu_co8143572.1_g000001 Rmu_co8276433.1_g000001
rosa_roxburghii Rroxscaffold_3G00244400
rosa_rugosa Rorug07G0151400
rosa_samantha Rh7AG288100 Rh7BG280000 Rh7BG280100 Rh7CG307900 Rh7DG291600
rosa_wichuraiana Rw7G024610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 188, 1774
AasI GACNNNNNNGTC 1 cut(s) 1708
AatII GACGTC 1 cut(s) 162
Acc16I TGCGCA 2 cut(s) 2142, 2313
Acc36I ACCTGC 3 cut(s) 188, 1774, 1830
AccB1I GGYRCC 1 cut(s) 1236
AccB7I CCANNNNNTGG 2 cut(s) 1177, 1246
AccI GTMKAC 1 cut(s) 1712
AccII CGCG 1 cut(s) 2177
AciI CCGC 6 cut(s) 298, 852, 1539, 1575, 1994, 2000
AclWI GGATC 4 cut(s) 249, 566, 972, 1894
AcoI YGGCCR 1 cut(s) 876
AcsI RAATTY 5 cut(s) 371, 677, 759, 1475, 1603
AcuI CTGAAG 4 cut(s) 201, 663, 2028, 2318
AcyI GRCGYC 1 cut(s) 159
AfaI GTAC 6 cut(s) 86, 974, 1260, 1342, 1552, 1899
AfiI CCNNNNNNNGG 4 cut(s) 112, 384, 1177, 1246
AjiI CACGTC 1 cut(s) 2211
AjnI CCWGG 2 cut(s) 926, 1777
AjuI GAANNNNNNNTTGG 2 cut(s) 666, 698
AleI CACNNNNGTG 2 cut(s) 515, 1296
AluBI AGCT 9 cut(s) 43, 67, 360, 487, 1025, 1445, 1457, 1926, 2006
AluI AGCT 9 cut(s) 43, 67, 360, 487, 1025, 1445, 1457, 1926, 2006
Alw21I GWGCWC 2 cut(s) 1447, 1546
Alw26I GTCTC 6 cut(s) 166, 444, 772, 1343, 2109, 2201
AlwI GGATC 4 cut(s) 249, 566, 972, 1894
AlwNI CAGNNNCTG 3 cut(s) 641, 848, 1460
Ama87I CYCGRG 1 cut(s) 2242
AoxI GGCC 2 cut(s) 876, 2105
ApeKI GCWGC 5 cut(s) 173, 357, 1308, 1317, 1997
ApoI RAATTY 5 cut(s) 371, 677, 759, 1475, 1603
AspLEI GCGC 2 cut(s) 2143, 2314
AspS9I GGNCC 4 cut(s) 566, 686, 953, 1283
AsuHPI GGTGA 4 cut(s) 179, 1103, 1650, 2081
AsuII TTCGAA 1 cut(s) 1075
AvaI CYCGRG 1 cut(s) 2242
AvaII GGWCC 4 cut(s) 566, 686, 953, 1283
BalI TGGCCA 1 cut(s) 878
BanI GGYRCC 1 cut(s) 1236
BanII GRGCYC 1 cut(s) 1447
BbsI GAAGAC 1 cut(s) 496
Bbv12I GWGCWC 2 cut(s) 1447, 1546
BbvCI CCTCAGC 1 cut(s) 1083
BbvI GCAGC 5 cut(s) 185, 369, 1295, 1304, 2009
BccI CCATC 6 cut(s) 149, 488, 1319, 2031, 2143, 2194
BceAI ACGGC 1 cut(s) 2274
BciT130I CCWGG 2 cut(s) 928, 1779
BciVI GTATCC 1 cut(s) 1263
BclI TGATCA 1 cut(s) 198
BcoDI GTCTC 6 cut(s) 166, 444, 772, 1343, 2109, 2201
BfaI CTAG 5 cut(s) 248, 272, 1022, 1121, 2127
BfmI CTRYAG 2 cut(s) 828, 1722
BfuAI ACCTGC 3 cut(s) 188, 1774, 1830
BfuI GTATCC 1 cut(s) 1263
BisI GCNGC 6 cut(s) 174, 358, 1309, 1318, 1995, 1998
BlsI GCNGC 6 cut(s) 175, 359, 1310, 1319, 1996, 1999
BmcAI AGTACT 2 cut(s) 1552, 1899
Bme1390I CCNGG 2 cut(s) 928, 1779
Bme18I GGWCC 4 cut(s) 566, 686, 953, 1283
BmeT110I CYCGRG 1 cut(s) 2242
BmgBI CACGTC 1 cut(s) 2211
BmgT120I GGNCC 4 cut(s) 566, 686, 953, 1283
BmiI GGNNCC 6 cut(s) 334, 567, 955, 1030, 1238, 2020
BmrFI CCNGG 2 cut(s) 928, 1779
BpiI GAAGAC 1 cut(s) 496
BplI GAGNNNNNCTC 2 cut(s) 379, 411
BpmI CTGGAG 1 cut(s) 1482
Bpu10I CCTNAGC 1 cut(s) 1083
Bpu14I TTCGAA 1 cut(s) 1075
BpuEI CTTGAG 3 cut(s) 381, 498, 1991
BsaAI YACGTR 1 cut(s) 1687
BsaHI GRCGYC 1 cut(s) 159
BsaI GGTCTC 1 cut(s) 444
BsaJI CCNNGG 9 cut(s) 225, 697, 879, 1114, 1155, 1312, 1518, 1777, 1802
BsaWI WCCGGW 3 cut(s) 164, 210, 238
BsaXI ACNNNNNCTCC 4 cut(s) 66, 96, 975, 1005
Bsc4I CCNNNNNNNGG 4 cut(s) 112, 384, 1177, 1246
Bse1I ACTGG 4 cut(s) 764, 1064, 1465, 1619
Bse3DI GCAATG 4 cut(s) 1632, 1713, 1769, 2118
BseBI CCWGG 2 cut(s) 928, 1779
BseDI CCNNGG 9 cut(s) 225, 697, 879, 1114, 1155, 1312, 1518, 1777, 1802
BseLI CCNNNNNNNGG 4 cut(s) 112, 384, 1177, 1246
BseMI GCAATG 4 cut(s) 1632, 1713, 1769, 2118
BseMII CTCAG 6 cut(s) 419, 457, 1097, 1561, 1683, 1932
BseNI ACTGG 4 cut(s) 764, 1064, 1465, 1619
BseRI GAGGAG 2 cut(s) 488, 2108
BseXI GCAGC 5 cut(s) 185, 369, 1295, 1304, 2009
BsgI GTGCAG 2 cut(s) 166, 2290
Bsh1236I CGCG 1 cut(s) 2177
BshFI GGCC 2 cut(s) 878, 2107
BshNI GGYRCC 1 cut(s) 1236
BsiHKAI GWGCWC 2 cut(s) 1447, 1546
BsiHKCI CYCGRG 1 cut(s) 2242
BsiSI CCGG 4 cut(s) 165, 211, 239, 2348
BslFI GGGAC 5 cut(s) 88, 579, 1906, 1980, 2238
BslI CCNNNNNNNGG 4 cut(s) 112, 384, 1177, 1246
BsmAI GTCTC 6 cut(s) 166, 444, 772, 1343, 2109, 2201
BsmBI CGTCTC 2 cut(s) 166, 2201
BsmFI GGGAC 5 cut(s) 88, 579, 1906, 1980, 2238
BsmI GAATGC 1 cut(s) 1591
BsnI GGCC 2 cut(s) 878, 2107
Bso31I GGTCTC 1 cut(s) 444
BsoBI CYCGRG 1 cut(s) 2242
Bsp119I TTCGAA 1 cut(s) 1075
Bsp1286I GDGCHC 2 cut(s) 1447, 1546
Bsp1407I TGTACA 1 cut(s) 1258
Bsp143I GATC 6 cut(s) 198, 241, 571, 897, 964, 1886
Bsp19I CCATGG 5 cut(s) 225, 697, 1114, 1155, 1802
BspACI CCGC 6 cut(s) 298, 852, 1539, 1575, 1994, 2000
BspANI GGCC 2 cut(s) 878, 2107
BspCNI CTCAG 6 cut(s) 418, 456, 1096, 1560, 1682, 1931
BspFNI CGCG 1 cut(s) 2177
BspLI GGNNCC 6 cut(s) 334, 567, 955, 1030, 1238, 2020
BspMAI CTGCAG 1 cut(s) 1726
BspMI ACCTGC 3 cut(s) 188, 1774, 1830
BspPI GGATC 4 cut(s) 249, 566, 972, 1894
BspT104I TTCGAA 1 cut(s) 1075
BspT107I GGYRCC 1 cut(s) 1236
BspTNI GGTCTC 1 cut(s) 444
BsrDI GCAATG 4 cut(s) 1632, 1713, 1769, 2118
BsrGI TGTACA 1 cut(s) 1258
BsrI ACTGG 4 cut(s) 764, 1064, 1465, 1619
BssECI CCNNGG 9 cut(s) 225, 697, 879, 1114, 1155, 1312, 1518, 1777, 1802
BssMI GATC 6 cut(s) 198, 241, 571, 897, 964, 1886
BssNI GRCGYC 1 cut(s) 159
BssT1I CCWWGG 7 cut(s) 225, 697, 879, 1114, 1155, 1518, 1802
Bst2UI CCWGG 2 cut(s) 928, 1779
Bst4CI ACNGT 7 cut(s) 1036, 1128, 1136, 1385, 1717, 1897, 2287
Bst6I CTCTTC 3 cut(s) 346, 1225, 2033
BstACI GRCGYC 1 cut(s) 159
BstAUI TGTACA 1 cut(s) 1258
BstBAI YACGTR 1 cut(s) 1687
BstBI TTCGAA 1 cut(s) 1075
BstC8I GCNNGC 3 cut(s) 868, 1027, 1537
BstDEI CTNAG 7 cut(s) 405, 443, 1083, 1366, 1547, 1669, 1918
BstDSI CCRYGG 5 cut(s) 225, 697, 1114, 1155, 1802
BstFNI CGCG 1 cut(s) 2177
BstHHI GCGC 2 cut(s) 2143, 2314
BstKTI GATC 6 cut(s) 201, 244, 574, 900, 967, 1889
BstMAI GTCTC 6 cut(s) 166, 444, 772, 1343, 2109, 2201
BstMBI GATC 6 cut(s) 198, 241, 571, 897, 964, 1886
BstMWI GCNNNNNNNGC 6 cut(s) 227, 1104, 1314, 1317, 1541, 2003
BstNI CCWGG 2 cut(s) 928, 1779
BstNSI RCATGY 3 cut(s) 29, 1091, 1786
BstSCI CCNGG 2 cut(s) 926, 1777
BstSFI CTRYAG 2 cut(s) 828, 1722
BstSNI TACGTA 1 cut(s) 1687
BstUI CGCG 1 cut(s) 2177
BstV1I GCAGC 5 cut(s) 185, 369, 1295, 1304, 2009
BstV2I GAAGAC 1 cut(s) 496
BstXI CCANNNNNNTGG 1 cut(s) 288
BsuI GTATCC 1 cut(s) 1263
BsuRI GGCC 2 cut(s) 878, 2107
BtgI CCRYGG 5 cut(s) 225, 697, 1114, 1155, 1802
BtgZI GCGATG 1 cut(s) 837
BtrI CACGTC 1 cut(s) 2211
BtsI GCAGTG 3 cut(s) 123, 1719, 2307
BtsIMutI CAGTG 6 cut(s) 123, 639, 1032, 1719, 2297, 2307
BveI ACCTGC 3 cut(s) 188, 1774, 1830
Cac8I GCNNGC 3 cut(s) 868, 1027, 1537
CaiI CAGNNNCTG 3 cut(s) 641, 848, 1460
CfoI GCGC 2 cut(s) 2143, 2314
Cfr13I GGNCC 4 cut(s) 566, 686, 953, 1283
CseI GACGC 1 cut(s) 179
Csp6I GTAC 6 cut(s) 85, 973, 1259, 1341, 1551, 1898
CviQI GTAC 6 cut(s) 85, 973, 1259, 1341, 1551, 1898
DdeI CTNAG 7 cut(s) 405, 443, 1083, 1366, 1547, 1669, 1918
DpnI GATC 6 cut(s) 200, 243, 573, 899, 966, 1888
DpnII GATC 6 cut(s) 198, 241, 571, 897, 964, 1886
DraI TTTAAA 1 cut(s) 2046
DrdI GACNNNNNNGTC 1 cut(s) 1708
DseDI GACNNNNNNGTC 1 cut(s) 1708
EaeI YGGCCR 1 cut(s) 876
Eam1104I CTCTTC 3 cut(s) 346, 1225, 2033
EarI CTCTTC 3 cut(s) 346, 1225, 2033
Ecl136II GAGCTC 1 cut(s) 1445
Eco105I TACGTA 1 cut(s) 1687
Eco130I CCWWGG 7 cut(s) 225, 697, 879, 1114, 1155, 1518, 1802
Eco24I GRGCYC 1 cut(s) 1447
Eco31I GGTCTC 1 cut(s) 444
Eco32I GATATC 1 cut(s) 580
Eco47I GGWCC 4 cut(s) 566, 686, 953, 1283
Eco53kI GAGCTC 1 cut(s) 1445
Eco57I CTGAAG 4 cut(s) 201, 663, 2028, 2318
Eco88I CYCGRG 1 cut(s) 2242
EcoICRI GAGCTC 1 cut(s) 1445
EcoO109I RGGNCCY 2 cut(s) 566, 953
EcoRI GAATTC 3 cut(s) 677, 759, 1475
EcoRII CCWGG 2 cut(s) 926, 1777
EcoRV GATATC 1 cut(s) 580
EcoT14I CCWWGG 7 cut(s) 225, 697, 879, 1114, 1155, 1518, 1802
EcoT38I GRGCYC 1 cut(s) 1447
ErhI CCWWGG 7 cut(s) 225, 697, 879, 1114, 1155, 1518, 1802
Esp3I CGTCTC 2 cut(s) 166, 2201
FaqI GGGAC 5 cut(s) 88, 579, 1906, 1980, 2238
FauI CCCGC 1 cut(s) 1993
FbaI TGATCA 1 cut(s) 198
FblI GTMKAC 1 cut(s) 1712
Fnu4HI GCNGC 6 cut(s) 174, 358, 1309, 1318, 1995, 1998
FokI GGATG 9 cut(s) 208, 264, 478, 533, 740, 778, 1337, 1413, 1602
FriOI GRGCYC 1 cut(s) 1447
Fsp4HI GCNGC 6 cut(s) 174, 358, 1309, 1318, 1995, 1998
FspBI CTAG 5 cut(s) 248, 272, 1022, 1121, 2127
FspI TGCGCA 2 cut(s) 2142, 2313
GlaI GCGC 2 cut(s) 2142, 2313
GluI GCNGC 6 cut(s) 174, 358, 1309, 1318, 1995, 1998
GsuI CTGGAG 1 cut(s) 1482
HaeIII GGCC 2 cut(s) 878, 2107
HapII CCGG 4 cut(s) 165, 211, 239, 2348
HgaI GACGC 1 cut(s) 179
HhaI GCGC 2 cut(s) 2143, 2314
Hin1I GRCGYC 1 cut(s) 159
Hin6I GCGC 2 cut(s) 2141, 2312
HinP1I GCGC 2 cut(s) 2141, 2312
HincII GTYRAC 6 cut(s) 321, 366, 1139, 1945, 2173, 2194
HindII GTYRAC 6 cut(s) 321, 366, 1139, 1945, 2173, 2194
HindIII AAGCTT 2 cut(s) 65, 485
HpaII CCGG 4 cut(s) 165, 211, 239, 2348
HphI GGTGA 4 cut(s) 179, 1103, 1650, 2081
Hpy166II GTNNAC 9 cut(s) 85, 321, 366, 1139, 1363, 1713, 1945, 2173, 2194
Hpy188III TCNNGA 8 cut(s) 475, 575, 947, 981, 1148, 1377, 1398, 1652
Hpy8I GTNNAC 9 cut(s) 85, 321, 366, 1139, 1363, 1713, 1945, 2173, 2194
HpyAV CCTTC 7 cut(s) 346, 470, 813, 944, 1199, 1481, 2050
HpyCH4III ACNGT 7 cut(s) 1036, 1128, 1136, 1385, 1717, 1897, 2287
HpyCH4IV ACGT 3 cut(s) 159, 1686, 2210
HpyF10VI GCNNNNNNNGC 6 cut(s) 227, 1104, 1314, 1317, 1541, 2003
HpyF3I CTNAG 7 cut(s) 405, 443, 1083, 1366, 1547, 1669, 1918
HpySE526I ACGT 3 cut(s) 159, 1686, 2210
Hsp92I GRCGYC 1 cut(s) 159
HspAI GCGC 2 cut(s) 2141, 2312
Ksp22I TGATCA 1 cut(s) 198
Kzo9I GATC 6 cut(s) 198, 241, 571, 897, 964, 1886
LmnI GCTCC 5 cut(s) 4, 1034, 1490, 1748, 2003
Lsp1109I GCAGC 5 cut(s) 185, 369, 1295, 1304, 2009
MaeI CTAG 5 cut(s) 248, 272, 1022, 1121, 2127
MaeII ACGT 3 cut(s) 159, 1686, 2210
MaeIII GTNAC 7 cut(s) 134, 167, 446, 887, 1522, 1717, 2281
MalI GATC 6 cut(s) 200, 243, 573, 899, 966, 1888
MboI GATC 6 cut(s) 198, 241, 571, 897, 964, 1886
MfeI CAATTG 3 cut(s) 552, 1527, 1791
MhlI GDGCHC 2 cut(s) 1447, 1546
MlsI TGGCCA 1 cut(s) 878
MluNI TGGCCA 1 cut(s) 878
MlyI GAGTC 6 cut(s) 125, 200, 1473, 2178, 2234, 2277
MmeI TCCRAC 1 cut(s) 822
Mox20I TGGCCA 1 cut(s) 878
MscI TGGCCA 1 cut(s) 878
MseI TTAA 5 cut(s) 585, 809, 1644, 2045, 2111
MslI CAYNNNNRTG 2 cut(s) 515, 1296
Msp20I TGGCCA 1 cut(s) 878
MspA1I CMGCKG 1 cut(s) 2000
MspI CCGG 4 cut(s) 165, 211, 239, 2348
MspR9I CCNGG 2 cut(s) 928, 1779
MunI CAATTG 3 cut(s) 552, 1527, 1791
Mva1269I GAATGC 1 cut(s) 1591
MvaI CCWGG 2 cut(s) 928, 1779
MvnI CGCG 1 cut(s) 2177
MwoI GCNNNNNNNGC 6 cut(s) 227, 1104, 1314, 1317, 1541, 2003
NcoI CCATGG 5 cut(s) 225, 697, 1114, 1155, 1802
NdeII GATC 6 cut(s) 198, 241, 571, 897, 964, 1886
NlaIV GGNNCC 6 cut(s) 334, 567, 955, 1030, 1238, 2020
NmeAIII GCCGAG 1 cut(s) 1293
NmuCI GTSAC 4 cut(s) 134, 167, 1522, 1717
NsbI TGCGCA 2 cut(s) 2142, 2313
NspI RCATGY 3 cut(s) 29, 1091, 1786
NspV TTCGAA 1 cut(s) 1075
OliI CACNNNNGTG 2 cut(s) 515, 1296
PaeR7I CTCGAG 1 cut(s) 2242
PaqCI CACCTGC 2 cut(s) 188, 1774
PctI GAATGC 1 cut(s) 1591
PfeI GAWTC 4 cut(s) 1209, 1514, 1567, 1655
PflMI CCANNNNNTGG 2 cut(s) 1177, 1246
PkrI GCNGC 6 cut(s) 175, 359, 1310, 1319, 1996, 1999
PleI GAGTC 6 cut(s) 124, 199, 1472, 2177, 2234, 2276
PpsI GAGTC 6 cut(s) 124, 199, 1472, 2177, 2234, 2276
Ppu21I YACGTR 1 cut(s) 1687
PpuMI RGGWCCY 2 cut(s) 566, 953
Psp124BI GAGCTC 1 cut(s) 1447
Psp5II RGGWCCY 2 cut(s) 566, 953
Psp6I CCWGG 2 cut(s) 926, 1777
PspGI CCWGG 2 cut(s) 926, 1777
PspN4I GGNNCC 6 cut(s) 334, 567, 955, 1030, 1238, 2020
PspPI GGNCC 4 cut(s) 566, 686, 953, 1283
PspPPI RGGWCCY 2 cut(s) 566, 953
PspXI VCTCGAGB 1 cut(s) 2242
PsrI GAACNNNNNNTAC 2 cut(s) 1251, 1283
PstI CTGCAG 1 cut(s) 1726
PstNI CAGNNNCTG 3 cut(s) 641, 848, 1460
RsaI GTAC 6 cut(s) 86, 974, 1260, 1342, 1552, 1899
RsaNI GTAC 6 cut(s) 85, 973, 1259, 1341, 1551, 1898
RseI CAYNNNNRTG 2 cut(s) 515, 1296
SacI GAGCTC 1 cut(s) 1447
SaqAI TTAA 5 cut(s) 585, 809, 1644, 2045, 2111
SatI GCNGC 6 cut(s) 174, 358, 1309, 1318, 1995, 1998
Sau3AI GATC 6 cut(s) 198, 241, 571, 897, 964, 1886
Sau96I GGNCC 4 cut(s) 566, 686, 953, 1283
ScaI AGTACT 2 cut(s) 1552, 1899
SchI GAGTC 6 cut(s) 125, 200, 1473, 2178, 2234, 2277
ScrFI CCNGG 2 cut(s) 928, 1779
SduI GDGCHC 2 cut(s) 1447, 1546
SfcI CTRYAG 2 cut(s) 828, 1722
Sfr274I CTCGAG 1 cut(s) 2242
SfuI TTCGAA 1 cut(s) 1075
SinI GGWCC 4 cut(s) 566, 686, 953, 1283
SlaI CTCGAG 1 cut(s) 2242
SmiMI CAYNNNNRTG 2 cut(s) 515, 1296
SmlI CTYRAG 4 cut(s) 396, 513, 1970, 2242
SmoI CTYRAG 4 cut(s) 396, 513, 1970, 2242
SnaBI TACGTA 1 cut(s) 1687
SsiI CCGC 6 cut(s) 298, 852, 1539, 1575, 1994, 2000
SspI AATATT 1 cut(s) 1594
SspMI CTAG 5 cut(s) 248, 272, 1022, 1121, 2127
SstI GAGCTC 1 cut(s) 1447
StyD4I CCNGG 2 cut(s) 926, 1777
StyI CCWWGG 7 cut(s) 225, 697, 879, 1114, 1155, 1518, 1802
TaaI ACNGT 7 cut(s) 1036, 1128, 1136, 1385, 1717, 1897, 2287
TaiI ACGT 3 cut(s) 162, 1689, 2213
TaqI TCGA 9 cut(s) 244, 611, 1075, 1131, 1273, 1447, 1570, 2102, 2243
TatI WGTACW 4 cut(s) 972, 1258, 1550, 1897
TauI GCSGC 1 cut(s) 1997
TfiI GAWTC 4 cut(s) 1209, 1514, 1567, 1655
Tru1I TTAA 5 cut(s) 585, 809, 1644, 2045, 2111
Tru9I TTAA 5 cut(s) 585, 809, 1644, 2045, 2111
TscAI CASTG 6 cut(s) 130, 646, 1039, 1726, 2297, 2314
TseFI GTSAC 4 cut(s) 134, 167, 1522, 1717
TseI GCWGC 5 cut(s) 173, 357, 1308, 1317, 1997
Tsp45I GTSAC 4 cut(s) 134, 167, 1522, 1717
TspDTI ATGAA 7 cut(s) 33, 299, 328, 443, 642, 1215, 1500
TspGWI ACGGA 2 cut(s) 636, 760
TspRI CASTG 6 cut(s) 130, 646, 1039, 1726, 2297, 2314
Van91I CCANNNNNTGG 2 cut(s) 1177, 1246
VpaK11BI GGWCC 4 cut(s) 566, 686, 953, 1283
XapI RAATTY 5 cut(s) 371, 677, 759, 1475, 1603
XceI RCATGY 3 cut(s) 29, 1091, 1786
XhoI CTCGAG 1 cut(s) 2242
XmiI GTMKAC 1 cut(s) 1712
XspI CTAG 5 cut(s) 248, 272, 1022, 1121, 2127
ZraI GACGTC 1 cut(s) 160
ZrmI AGTACT 2 cut(s) 1552, 1899
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.