Rorug07G0151400

Long-chain-alcohol oxidase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
12029562 .. 12029780
219 bp
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UTR
Exon/CDS
Intron
Rorug07G0151400.1

Sequence Viewer

Length: 219 bp
ATGGTGGTTCGGTTGGACATGGTGTGGATCTGGGTGGAATTACAGGGGCTTCATCTGGCGATTTTGGGAACCAACCATCTGGCTGGTAGGGTAAACGATCAGGGAAGTACTGCATGTAGATCAGGCTGGGTTAAGGCGCGGTGTGGCGAGGGTCCGACTTGTGCTGTAGTACATTTCAGGTATGAGACGCTGTCGGGTCGGTGCAACAGTGCACCATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

72

Amino Acids

7.9

Weight (kDa)

8.51

Isoelectric Point (pI)

23.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015043)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 139
AciI CCGC 1 cut(s) 139
AclWI GGATC 1 cut(s) 35
AfaI GTAC 2 cut(s) 109, 171
Alw21I GWGCWC 1 cut(s) 214
Alw26I GTCTC 1 cut(s) 179
Alw44I GTGCAC 1 cut(s) 210
AlwI GGATC 1 cut(s) 35
ApaLI GTGCAC 1 cut(s) 210
AspLEI GCGC 1 cut(s) 139
AspS9I GGNCC 1 cut(s) 152
AvaII GGWCC 1 cut(s) 152
BaeGI GKGCMC 1 cut(s) 214
Bbv12I GWGCWC 1 cut(s) 214
BccI CCATC 1 cut(s) 84
BcoDI GTCTC 1 cut(s) 179
BfmI CTRYAG 1 cut(s) 165
BmcAI AGTACT 1 cut(s) 109
Bme18I GGWCC 1 cut(s) 152
BmgT120I GGNCC 1 cut(s) 152
BmiI GGNNCC 2 cut(s) 70, 153
BseSI GKGCMC 1 cut(s) 214
BseYI CCCAGC 1 cut(s) 126
Bsh1236I CGCG 1 cut(s) 139
BsiHKAI GWGCWC 1 cut(s) 214
BsmAI GTCTC 1 cut(s) 179
BsmBI CGTCTC 1 cut(s) 179
Bsp1286I GDGCHC 1 cut(s) 214
Bsp143I GATC 3 cut(s) 27, 97, 119
BspACI CCGC 1 cut(s) 139
BspFNI CGCG 1 cut(s) 139
BspLI GGNNCC 2 cut(s) 70, 153
BspPI GGATC 1 cut(s) 35
BssMI GATC 3 cut(s) 27, 97, 119
Bst4CI ACNGT 1 cut(s) 209
BstFNI CGCG 1 cut(s) 139
BstHHI GCGC 1 cut(s) 139
BstKTI GATC 3 cut(s) 30, 100, 122
BstMAI GTCTC 1 cut(s) 179
BstMBI GATC 3 cut(s) 27, 97, 119
BstNSI RCATGY 1 cut(s) 117
BstSFI CTRYAG 1 cut(s) 165
BstSLI GKGCMC 1 cut(s) 214
BstUI CGCG 1 cut(s) 139
BstX2I RGATCY 1 cut(s) 27
BstXI CCANNNNNNTGG 2 cut(s) 79, 83
BstYI RGATCY 1 cut(s) 27
BtsIMutI CAGTG 1 cut(s) 214
CfoI GCGC 1 cut(s) 139
Cfr13I GGNCC 1 cut(s) 152
CseI GACGC 1 cut(s) 196
Csp6I GTAC 2 cut(s) 108, 170
CviAII CATG 3 cut(s) 19, 114, 216
CviJI RGCY 3 cut(s) 49, 83, 126
CviKI_1 RGCY 3 cut(s) 49, 83, 126
CviQI GTAC 2 cut(s) 108, 170
DpnI GATC 3 cut(s) 29, 99, 121
DpnII GATC 3 cut(s) 27, 97, 119
Eco47I GGWCC 1 cut(s) 152
Esp3I CGTCTC 1 cut(s) 179
FaeI CATG 3 cut(s) 22, 117, 219
FaiI YATR 4 cut(s) 20, 115, 183, 217
FatI CATG 3 cut(s) 18, 113, 215
GlaI GCGC 1 cut(s) 138
GsaI CCCAGC 1 cut(s) 130
HgaI GACGC 1 cut(s) 196
HhaI GCGC 1 cut(s) 139
Hin1II CATG 3 cut(s) 22, 117, 219
Hin6I GCGC 1 cut(s) 137
HinP1I GCGC 1 cut(s) 137
Hpy166II GTNNAC 2 cut(s) 94, 212
Hpy188I TCNGA 1 cut(s) 156
Hpy8I GTNNAC 2 cut(s) 94, 212
HpyCH4III ACNGT 1 cut(s) 209
HpyCH4V TGCA 3 cut(s) 113, 204, 212
Hsp92II CATG 3 cut(s) 22, 117, 219
HspAI GCGC 1 cut(s) 137
Kzo9I GATC 3 cut(s) 27, 97, 119
LpnPI CCDG 9 cut(s) 16, 29, 41, 65, 69, 86, 108, 112, 163
MalI GATC 3 cut(s) 29, 99, 121
MboI GATC 3 cut(s) 27, 97, 119
MflI RGATCY 1 cut(s) 27
MhlI GDGCHC 1 cut(s) 214
MluCI AATT 1 cut(s) 38
MmeI TCCRAC 1 cut(s) 179
MnlI CCTC 1 cut(s) 142
MseI TTAA 1 cut(s) 132
MvnI CGCG 1 cut(s) 139
NdeII GATC 3 cut(s) 27, 97, 119
NlaIII CATG 3 cut(s) 22, 117, 219
NlaIV GGNNCC 2 cut(s) 70, 153
NspI RCATGY 1 cut(s) 117
PflFI GACNNNGTC 1 cut(s) 190
PspFI CCCAGC 1 cut(s) 126
PspN4I GGNNCC 2 cut(s) 70, 153
PspPI GGNCC 1 cut(s) 152
PsuI RGATCY 1 cut(s) 27
PsyI GACNNNGTC 1 cut(s) 190
RsaI GTAC 2 cut(s) 109, 171
RsaNI GTAC 2 cut(s) 108, 170
SaqAI TTAA 1 cut(s) 132
Sau3AI GATC 3 cut(s) 27, 97, 119
Sau96I GGNCC 1 cut(s) 152
ScaI AGTACT 1 cut(s) 109
SduI GDGCHC 1 cut(s) 214
SetI ASST 1 cut(s) 182
SfcI CTRYAG 1 cut(s) 165
SinI GGWCC 1 cut(s) 152
Sse9I AATT 1 cut(s) 38
SsiI CCGC 1 cut(s) 139
TaaI ACNGT 1 cut(s) 209
TasI AATT 1 cut(s) 38
TatI WGTACW 2 cut(s) 107, 169
Tru1I TTAA 1 cut(s) 132
Tru9I TTAA 1 cut(s) 132
TscAI CASTG 1 cut(s) 214
TspDTI ATGAA 1 cut(s) 41
TspRI CASTG 1 cut(s) 214
Tth111I GACNNNGTC 1 cut(s) 190
VneI GTGCAC 1 cut(s) 210
VpaK11BI GGWCC 1 cut(s) 152
XceI RCATGY 1 cut(s) 117
ZrmI AGTACT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.