Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0018287

Physical Location & Seq

Genomic Coordinates Reverse (-)

67724594 .. 67733123

Gene Structure 8530 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3792 bp

ATGTCACGTCGTCGAAGCAACGGCGCATCCCCATTGGTTAACCCACAGCGCCAAATCACTTCCTTCTTCGCCAAAGCCACTTCCTCTCCATCTCCAATCCCTAAATCTAAATCTAAACCCAGCCCGGGTTCCAGCCCTAGCTCCACCACGCCTTCGCCTCTCCAATCCAAGCCTAAGCCCGATCCCGATCCCAATCCGAAGAAATCGTTGTACGGCCAAGAGGTGGTCGGCAAGAGGATCAAGGTGTACTGGGCGAGTGATAGGGCCTGGTACGAAGGCTGTGTCAAGTTGTTCAATAAGGAGAGTGGTAAGCACTTACTTCAGTACGACGATGGCGACGAAGAGACTTTGGATTTGGCCACCGAGAAAATCGAGTGGATTCAAGAGACCGTCCAGACCTTTAAGCGCTTGCGCCGCGGTCCTTTGCCCACTCCCGAGGCGGAGGAGGAGGAGGAGGTCAAGGAAGACAGTGATGATGATGATTCCGGCGATGAGGATTGGGGAAAGAGTGTGGAAAAGGAACTAGTTGAGGAGGAAGACGAGGTTATGGAATTGGAGGAGGAGCAAGATGATGATGATGATGATGAGGGACTCCAGCCCAAGCCCAAAGGAAGGCGCGGCGGCTCCGGTGGTAAACGGAAGTTGAGCGGCGGAGGGAATTTGGGGTCTGCTAAGAAGACCAAGACTGGTGGACATGTAGCCACTAATGGCCTCAAGCCTAATTTGATTCAGCCTACTACTACTACTACTAATGCTGCTGAGAGCACAAAGGCGGTTAATGGTATCAATATTGGTGATGCCTCAGAAAGGTTTAGCAAGCGTGAAGCTGACAAGTTCCGTTTCCTTGGGGAAAAACGCAGGGATGCCAAAAAAAGACAACCTGGGGATGCAAATTATGATCCAAGAACTCTATATCTACCTCCTGATTTCTTAAAGAATTTATCAGGTGGCCAGAGACAATGGTGGGAGTTTAAGTCAAAGCACATGGACAAAGTTCTATTTTTCAAGATGGGCAAGTTCTATGAACTTTTTGAAATGGATGCACATATAGGAGCAAAAGAACTTGATCTTCAATATATGAAGGGTGAACAACCCCATTGTGGATTTCCAGAGAAGAACTTTTCAATGCATGCGGAGAAACTGGCTAGGAAGGGTTACCGAGTTCTTGTCATAGAGCAGACAGAAACACCTGAACAGATGGAGCTTCGTCGCAAAGAGGGTGGCTCTAAAGATAAGGTTGTGAAACGTGAAGTATGTGCAGTAGTTACAAAAGGAACACTAACTGAAGGAGAGATGCTGTCCGCAAACCCTGATGCTTCTTATCTAATGGCAGTGACTGAAACCTCTCAAAATTTAGCAAACCAAAATGGCGAGCGTATTTTTGGAGTTTGTGTGGTTGATGTTGCTACCAGTAGGGTTATTCTTGGACAGTTCGCAGATGATTTAGAGTGCAGTGCCTTGTCTTGTCTCTTGTCTGAATTGAGGCCCGTGGAACTAGTAAAACCAGCAGAACTACTTAGTCCTGAGACAGAAAAAGTACTGCTAAGACATACAAGAAGTCCACTAGTGAATGAGTTGGTTCCACTTCTGGAATTCTGGGATGCTGAGAGAACTGTTTGTGAAGTTAAAAGTATCTATAGCTGTGCTGATGATTCTCATATGGAAGAACATGGCTTGGGCTGCATGCCAGATGTATTGTCTGAGCTTGTGGGAGCCGGGGAGGATGGCATCTGTGCACTTTCAGCTCTTGGGGGTGTTCTTTTCTACTTAAAGCAGGCTTTTCTAGAAGAGACATTGCTTAGATTTGCAAAATTTGAGTTACTTCCAAGTTCTGGTTTTGGTGGTATCATATCAAAACCATACATGGTTCTCGATGCAGCTGCACTAGAGAACCTGGAGATTTTTGAAAACAGCAGAAATGGAGACTCTTCAGGGACAATGTATGCGCAATTGAATCACTGTGTGACTGCATTTGGGAAGAGATTGCTTAAGACATGGCTTGCAAGACCTCTGTATCATGTAGAGTTAATTAAGGAACGCCAGGATGCTGTCTCAAGTTTACAGGGAATCAACCTTCCTCACGCACTTGAATTTCGAAAAGCAATGGCTAGGCTTCCGGACATGGAGCGCTTGCTTGCACGGGTCTTCGCTAGCAGTAAAGCTACTGGAAGGAATGCAAACAAAGTGGTTTTATATGAGGATGCCGCCAAAAAACAGCTCCAGGAGTTTATTACAGCTCTACGCGGTTGTGAATTAATGGCGGCAACAAGTTGCTCTCTTGGTGTCAACTTGGGAAATGTTGAATCTCGACAACTTCATCATTTGCTGACACCTGGTAAAGGTCTTCCTAATGTCAACTCAGTTTTAAAGCACTTCAAGGATGGCTTTGATTGGGTAGAAGCCAATAGTTCAGGTCGTATAATACCTCATGAAGGAGTTGATACTGAATACGACGCTGCATGTGGAAAAGTAAAAGAGATCGAGTCTCATTTAACTAAGTACCTTAACGAACAGAGGGAATTACTCGGAGATAAATCGATCACTTATGTCACAATTGGAAAAGAAGCATACCTATTGGAAGTTCCAGAAAGTTTGCGTGAGAGTATACCTCAGGATTATGAATTACGTTCATCCAAAAAGGGTTTCTTTAGGTACTGGACACCAAATATTAAGAAGTCATTGACTGAGCTCTCACAAGCTGAATCTGATAGGGAGTCCTCACTTAAAAGCATTTTGCAGAGGTTAATTGGACAATTCTGCGAGCATCATATTAAGTGGAGACAGTTGGTCTCTGTGACTGCTGAACTGGATGTTTTAATCAGTCTAGCAATTGCAAGTGATTATTCCGAGGGACCCACCTGTCGGCCTGTTATCATGAGTTCATCAGATACAGATGAAGTACCCCTCTTGTCCGCAAATAGTTTGGGACATCCTGTTCTTAGAAGTGATTCTTTAGGAAAAGGTACATTTGTCCCCAATGACATTACTCTTGGAGGTTCTGGTCATGCAAGCTTTGTCCTTCTCACTGGCCCTAACATGGGTGGGAAGTCAACTCTGCTTCGCCAAGTTTGCTTGGCTGTGATTTTAGCCCAGTTAGGAGCAGATGTGCCTGCAGAGAGCTTTGAGCTATCTCCTGTTGATCGAATCTTTGTTCGGATGGGTGCTAAAGATCATATTATGGTAGGCCAAAGTACATTTCTGACGGAGCTGTCAGAAACTGCAACAATGCTGTCATCTGCTACTCGTAACTCATTGGTAGCACTGGATGAACTTGGACGTGGGACATCAACTTCAGATGGACAAGCCATTGCGGAATCAGTTCTTGAACATTTTGTCCACAAGGTTCACTGTCGAGGAATGTTTTCTACTCACTATCACAGGCTAGCTGTTGATTATCAGAATAATTCTCAGGTTTCACTCTGCCATATGGCATGCCATGTTGGAAATGGAGATGCTGGTGTAGAAGAAGTGACATTTCTTTACAGATTGACTCCCGGTGCTTGTCCTAAAAGCTATGGTGTCAACATTGCTCGGTTAGCTGGACTTCCTATTTCTGTGCTTCAAAAAGCTGCTGCTAAGTCCAGGGAATTCGAAGCTGCATATGGTAAACACTTGAAGCAATCTGAAGATAGCTTTCCCTTTCAAAGTCCAGTTAACAAGATGGTTGAGTGCATCCAAAAGGTTACCAACATCGTGGCAAAGTTGACTAGTCACGAGTCTACTGAGGGCATCAACATTGACTCCCTGACTGAAGTTTGGCATAAAGCAAGATTGCTTGAGCAACAAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000217 GO:0000404 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006259 GO:0006281 GO:0006290 GO:0006298 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008094 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030983 GO:0032135 GO:0032300 GO:0032991 GO:0033554 GO:0034641 GO:0042623 GO:0043170 GO:0043570 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko01524 ko03430 ko05200 ko05210 map01524 map03430 map05200 map05210

Pfam Domains

Protein Families

MutS_I MutS_II MutS_III MutS_IV MutS_V

Protein Analysis

1263

Amino Acids

139.66

Weight (kDa)

5.77

Isoelectric Point (pI)

51.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MutS_I	PF01624	317 - 430	1.2e-33	MutS domain I
MutS_II	PF05188	440 - 523	1.8e-08	MutS domain II
MutS_III	PF05192	627 - 943	2.6e-34	MutS domain III
MutS_IV	PF05190	812 - 902	2.6e-16	MutS family domain IV
MutS_V	PF00488	1007 - 1197	2.5e-67	MutS domain V

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018287)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10950
rosa_chinensis	RchiOBHm_Chr7g0241701
rosa_multiflora	Rmu_sc0002268.1_g000005 Rmu_sc0017195.1_g000001
rosa_roxburghii	Rroxscaffold_1G00054410
rosa_rugosa	Rorug07G0346500
rosa_samantha	Rh2BG003900 Rh7AG501000 Rh7BG472200
rosa_wichuraiana	Rw7G042330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	2859, 3208
Acc16I	TGCGCA	1 cut(s)	1947
AccB7I	CCANNNNNTGG	2 cut(s)	223, 1832
AccBSI	CCGCTC	1 cut(s)	648
AccI	GTMKAC	2 cut(s)	2605, 3719
AccII	CGCG	3 cut(s)	417, 618, 2244
AccIII	TCCGGA	1 cut(s)	2116
AclWI	GGATC	4 cut(s)	176, 182, 245, 893
AcoI	YGGCCR	3 cut(s)	214, 357, 949
AcsI	RAATTY	7 cut(s)	658, 937, 1351, 1592, 1811, 2090, 3587
AcuI	CTGAAG	6 cut(s)	305, 1305, 1914, 3276, 3645, 3771
AdeI	CACNNNGTG	1 cut(s)	1963
AfeI	AGCGCT	2 cut(s)	407, 2129
AflII	CTTAAG	1 cut(s)	1988
AflIII	ACRYGT	1 cut(s)	694
AhdI	GACNNNNNGTC	1 cut(s)	2786
AhlI	ACTAGT	4 cut(s)	523, 1495, 1564, 3707
AjiI	CACGTC	2 cut(s)	8, 3278
AjnI	CCWGG	7 cut(s)	266, 880, 1893, 2040, 2220, 2332, 3581
AjuI	GAANNNNNNNTTGG	4 cut(s)	2627, 2659, 3180, 3212
AloI	GAACNNNNNNTCC	4 cut(s)	2919, 2951, 3318, 3350
Alw21I	GWGCWC	3 cut(s)	767, 1738, 2691
Alw44I	GTGCAC	1 cut(s)	1734
AlwI	GGATC	4 cut(s)	176, 182, 245, 893
AlwNI	CAGNNNCTG	2 cut(s)	1337, 3218
Ama87I	CYCGRG	2 cut(s)	124, 434
Aor13HI	TCCGGA	1 cut(s)	2116
Aor51HI	AGCGCT	2 cut(s)	407, 2129
AoxI	GGCC	9 cut(s)	214, 264, 357, 709, 949, 1484, 2864, 3028, 3184
ApaLI	GTGCAC	1 cut(s)	1734
ApeKI	GCWGC	8 cut(s)	755, 1680, 1877, 1880, 2456, 3569, 3572, 3596
ApoI	RAATTY	7 cut(s)	658, 937, 1351, 1592, 1811, 2090, 3587
ArsI	GACNNNNNNTTYG	4 cut(s)	267, 299, 337, 369
AseI	ATTAAT	1 cut(s)	2255
Asp700I	GAANNNNTTC	3 cut(s)	2947, 3318, 3361
AspLEI	GCGC	7 cut(s)	26, 51, 408, 414, 618, 1948, 2130
AspS9I	GGNCC	5 cut(s)	264, 419, 1485, 2852, 3029
AsuC2I	CCSGG	4 cut(s)	125, 126, 1717, 3495
AsuHPI	GGTGA	2 cut(s)	806, 1097
AsuII	TTCGAA	2 cut(s)	2095, 3591
AsuNHI	GCTAGC	2 cut(s)	2150, 3382
AvaI	CYCGRG	2 cut(s)	124, 434
AvaII	GGWCC	2 cut(s)	419, 2852
AxyI	CCTNAGG	1 cut(s)	2610
BaeGI	GKGCMC	1 cut(s)	1738
BaeI	ACNNNNGTAYC	4 cut(s)	1997, 2030, 2955, 2988
BalI	TGGCCA	2 cut(s)	359, 951
BanII	GRGCYC	1 cut(s)	2691
BauI	CACGAG	1 cut(s)	3713
BbsI	GAAGAC	5 cut(s)	471, 543, 683, 2137, 2336
Bbv12I	GWGCWC	3 cut(s)	767, 1738, 2691
BbvI	GCAGC	8 cut(s)	742, 1667, 1867, 1889, 2443, 3556, 3559, 3583
BccI	CCATC	9 cut(s)	97, 326, 1003, 1192, 1718, 2375, 3151, 3290, 3655
BceAI	ACGGC	2 cut(s)	37, 229
BcgI	CGANNNNNNTGC	2 cut(s)	1862, 1896
BciT130I	CCWGG	7 cut(s)	268, 882, 1895, 2042, 2222, 2334, 3583
BcnI	CCSGG	4 cut(s)	125, 126, 1717, 3495
BcuI	ACTAGT	4 cut(s)	523, 1495, 1564, 3707
BfmI	CTRYAG	2 cut(s)	1636, 3111
BfoI	RGCGCY	3 cut(s)	52, 409, 2131
BfrI	CTTAAG	1 cut(s)	1988
BmcAI	AGTACT	1 cut(s)	1539
Bme18I	GGWCC	2 cut(s)	419, 2852
BmeRI	GACNNNNNGTC	1 cut(s)	2786
BmeT110I	CYCGRG	2 cut(s)	124, 434
BmgBI	CACGTC	2 cut(s)	8, 3278
BmgT120I	GGNCC	5 cut(s)	264, 419, 1485, 2852, 3029
BmiI	GGNNCC	6 cut(s)	130, 625, 1581, 1714, 2853, 2854
BmrI	ACTGGG	2 cut(s)	259, 3085
BmtI	GCTAGC	2 cut(s)	2154, 3386
BmuI	ACTGGG	2 cut(s)	259, 3085
BpiI	GAAGAC	5 cut(s)	471, 543, 683, 2137, 2336
BplI	GAGNNNNNCTC	4 cut(s)	1208, 1240, 2593, 2625
BpmI	CTGGAG	3 cut(s)	578, 1916, 2204
Bpu10I	CCTNAGC	1 cut(s)	174
Bpu14I	TTCGAA	2 cut(s)	2095, 3591
BpuEI	CTTGAG	2 cut(s)	698, 2038
BpuMI	CCSGG	4 cut(s)	125, 126, 1717, 3495
Bsa29I	ATCGAT	1 cut(s)	2537
BsaBI	GATNNNNATC	2 cut(s)	186, 192
BsaI	GGTCTC	2 cut(s)	380, 2794
BsaJI	CCNNGG	9 cut(s)	124, 415, 435, 844, 881, 1488, 1716, 2847, 3582
BsaWI	WCCGGW	2 cut(s)	626, 2116
Bse21I	CCTNAGG	1 cut(s)	2610
Bse3DI	GCAATG	4 cut(s)	1793, 2109, 3306, 3525
Bse8I	GATNNNNATC	2 cut(s)	186, 192
BseAI	TCCGGA	1 cut(s)	2116
BseBI	CCWGG	7 cut(s)	268, 882, 1895, 2042, 2222, 2334, 3583
BseCI	ATCGAT	1 cut(s)	2537
BseDI	CCNNGG	9 cut(s)	124, 415, 435, 844, 881, 1488, 1716, 2847, 3582
BseJI	GATNNNNATC	2 cut(s)	186, 192
BseMI	GCAATG	4 cut(s)	1793, 2109, 3306, 3525
BseRI	GAGGAG	7 cut(s)	458, 461, 464, 467, 545, 572, 575
BseSI	GKGCMC	1 cut(s)	1738
BseXI	GCAGC	8 cut(s)	742, 1667, 1867, 1889, 2443, 3556, 3559, 3583
BseYI	CCCAGC	1 cut(s)	119
BsgI	GTGCAG	3 cut(s)	1278, 1471, 1866
Bsh1236I	CGCG	3 cut(s)	417, 618, 2244
BshFI	GGCC	9 cut(s)	216, 266, 359, 711, 951, 1486, 2866, 3030, 3186
BshVI	ATCGAT	1 cut(s)	2537
BsiHKAI	GWGCWC	3 cut(s)	767, 1738, 2691
BsiHKCI	CYCGRG	2 cut(s)	124, 434
BsiSI	CCGG	6 cut(s)	125, 486, 627, 1716, 2117, 3495
BslFI	GGGAC	6 cut(s)	603, 1948, 2865, 2940, 2957, 3295
BsmFI	GGGAC	6 cut(s)	603, 1948, 2865, 2940, 2957, 3295
BsmI	GAATGC	1 cut(s)	2179
BsnI	GGCC	9 cut(s)	216, 266, 359, 711, 951, 1486, 2866, 3030, 3186
Bso31I	GGTCTC	2 cut(s)	380, 2794
BsoBI	CYCGRG	2 cut(s)	124, 434
Bsp119I	TTCGAA	2 cut(s)	2095, 3591
Bsp1286I	GDGCHC	3 cut(s)	767, 1738, 2691
Bsp13I	TCCGGA	1 cut(s)	2116
Bsp143I	GATC	9 cut(s)	181, 187, 237, 898, 1066, 2478, 2538, 3139, 3169
BspANI	GGCC	9 cut(s)	216, 266, 359, 711, 951, 1486, 2866, 3030, 3186
BspDI	ATCGAT	1 cut(s)	2537
BspEI	TCCGGA	1 cut(s)	2116
BspFNI	CGCG	3 cut(s)	417, 618, 2244
BspHI	TCATGA	2 cut(s)	2428, 2874
BspLI	GGNNCC	6 cut(s)	130, 625, 1581, 1714, 2853, 2854
BspMAI	CTGCAG	1 cut(s)	3115
BspOI	GCTAGC	2 cut(s)	2154, 3386
BspPI	GGATC	4 cut(s)	176, 182, 245, 893
BspT104I	TTCGAA	2 cut(s)	2095, 3591
BspTI	CTTAAG	1 cut(s)	1988
BspTNI	GGTCTC	2 cut(s)	380, 2794
BsrBI	CCGCTC	1 cut(s)	648
BsrDI	GCAATG	4 cut(s)	1793, 2109, 3306, 3525
BssECI	CCNNGG	9 cut(s)	124, 415, 435, 844, 881, 1488, 1716, 2847, 3582
BssMI	GATC	9 cut(s)	181, 187, 237, 898, 1066, 2478, 2538, 3139, 3169
BssNAI	GTATAC	1 cut(s)	2606
BssSI	CACGAG	1 cut(s)	3713
BssT1I	CCWWGG	1 cut(s)	844
Bst1107I	GTATAC	1 cut(s)	2606
Bst2BI	CACGAG	1 cut(s)	3713
Bst2UI	CCWGG	7 cut(s)	268, 882, 1895, 2042, 2222, 2334, 3583
Bst4CI	ACNGT	7 cut(s)	391, 470, 1431, 1615, 1961, 2784, 3350
Bst6I	CTCTTC	4 cut(s)	336, 1782, 1933, 1973
BstAFI	CTTAAG	1 cut(s)	1988
BstBI	TTCGAA	2 cut(s)	2095, 3591
BstDSI	CCRYGG	2 cut(s)	415, 1488
BstEII	GGTNACC	2 cut(s)	1154, 3682
BstENI	CCTNNNNNAGG	3 cut(s)	805, 2337, 2430
BstFNI	CGCG	3 cut(s)	417, 618, 2244
BstH2I	RGCGCY	3 cut(s)	52, 409, 2131
BstHHI	GCGC	7 cut(s)	26, 51, 408, 414, 618, 1948, 2130
BstKTI	GATC	9 cut(s)	184, 190, 240, 901, 1069, 2481, 2541, 3142, 3172
BstMBI	GATC	9 cut(s)	181, 187, 237, 898, 1066, 2478, 2538, 3139, 3169
BstMWI	GCNNNNNNNGC	5 cut(s)	414, 1680, 1742, 3069, 3536
BstNI	CCWGG	7 cut(s)	268, 882, 1895, 2042, 2222, 2334, 3583
BstNSI	RCATGY	5 cut(s)	698, 1133, 1687, 2463, 3435
BstPI	GGTNACC	2 cut(s)	1154, 3682
BstSFI	CTRYAG	2 cut(s)	1636, 3111
BstSLI	GKGCMC	1 cut(s)	1738
BstUI	CGCG	3 cut(s)	417, 618, 2244
BstV1I	GCAGC	8 cut(s)	742, 1667, 1867, 1889, 2443, 3556, 3559, 3583
BstV2I	GAAGAC	5 cut(s)	471, 543, 683, 2137, 2336
BstXI	CCANNNNNNTGG	1 cut(s)	3694
BstZ17I	GTATAC	1 cut(s)	2606
Bsu15I	ATCGAT	1 cut(s)	2537
Bsu36I	CCTNAGG	1 cut(s)	2610
BsuRI	GGCC	9 cut(s)	216, 266, 359, 711, 951, 1486, 2866, 3030, 3186
BsuTUI	ATCGAT	1 cut(s)	2537
BtgI	CCRYGG	2 cut(s)	415, 1488
BtgZI	GCGATG	1 cut(s)	504
BtrI	CACGTC	2 cut(s)	8, 3278
BtsI	GCAGTG	2 cut(s)	1338, 1459
BtsIMutI	CAGTG	7 cut(s)	475, 1338, 1459, 1957, 3024, 3260, 3346
CaiI	CAGNNNCTG	2 cut(s)	1337, 3218
CciI	TCATGA	2 cut(s)	2428, 2874
CfoI	GCGC	7 cut(s)	26, 51, 408, 414, 618, 1948, 2130
Cfr13I	GGNCC	5 cut(s)	264, 419, 1485, 2852, 3029
Cfr42I	CCGCGG	1 cut(s)	418
Cfr9I	CCCGGG	1 cut(s)	124
ClaI	ATCGAT	1 cut(s)	2537
CseI	GACGC	1 cut(s)	2462
CsiI	ACCWGGT	1 cut(s)	2332
CspCI	CAANNNNNGTGG	6 cut(s)	670, 705, 1201, 1236, 2166, 2201
DpnI	GATC	9 cut(s)	183, 189, 239, 900, 1068, 2480, 2540, 3141, 3171
DpnII	GATC	9 cut(s)	181, 187, 237, 898, 1066, 2478, 2538, 3139, 3169
DraI	TTTAAA	1 cut(s)	2367
DraIII	CACNNNGTG	1 cut(s)	1963
DrdI	GACNNNNNNGTC	2 cut(s)	2859, 3208
DriI	GACNNNNNGTC	1 cut(s)	2786
DseDI	GACNNNNNNGTC	2 cut(s)	2859, 3208
EaeI	YGGCCR	3 cut(s)	214, 357, 949
Eam1104I	CTCTTC	4 cut(s)	336, 1782, 1933, 1973
Eam1105I	GACNNNNNGTC	1 cut(s)	2786
EarI	CTCTTC	4 cut(s)	336, 1782, 1933, 1973
EciI	GGCGGA	2 cut(s)	455, 666
Ecl136II	GAGCTC	1 cut(s)	2689
Eco130I	CCWWGG	1 cut(s)	844
Eco24I	GRGCYC	1 cut(s)	2691
Eco31I	GGTCTC	2 cut(s)	380, 2794
Eco47I	GGWCC	2 cut(s)	419, 2852
Eco47III	AGCGCT	2 cut(s)	407, 2129
Eco53kI	GAGCTC	1 cut(s)	2689
Eco57I	CTGAAG	6 cut(s)	305, 1305, 1914, 3276, 3645, 3771
Eco81I	CCTNAGG	1 cut(s)	2610
Eco88I	CYCGRG	2 cut(s)	124, 434
Eco91I	GGTNACC	2 cut(s)	1154, 3682
EcoICRI	GAGCTC	1 cut(s)	2689
EcoNI	CCTNNNNNAGG	3 cut(s)	805, 2337, 2430
EcoO109I	RGGNCCY	2 cut(s)	264, 2852
EcoO65I	GGTNACC	2 cut(s)	1154, 3682
EcoRI	GAATTC	2 cut(s)	1592, 3587
EcoRII	CCWGG	7 cut(s)	266, 880, 1893, 2040, 2220, 2332, 3581
EcoT14I	CCWWGG	1 cut(s)	844
EcoT22I	ATGCAT	1 cut(s)	1131
EcoT38I	GRGCYC	1 cut(s)	2691
ErhI	CCWWGG	1 cut(s)	844
FalI	AAGNNNNNCTT	6 cut(s)	2369, 2401, 2630, 2662, 2935, 2967
FaqI	GGGAC	6 cut(s)	603, 1948, 2865, 2940, 2957, 3295
FauNDI	CATATG	3 cut(s)	1659, 3426, 3601
FblI	GTMKAC	2 cut(s)	2605, 3719
FriOI	GRGCYC	1 cut(s)	2691
FspI	TGCGCA	1 cut(s)	1947
GlaI	GCGC	7 cut(s)	25, 50, 407, 413, 617, 1947, 2129
GsaI	CCCAGC	1 cut(s)	123
GsuI	CTGGAG	3 cut(s)	578, 1916, 2204
HaeII	RGCGCY	3 cut(s)	52, 409, 2131
HaeIII	GGCC	9 cut(s)	216, 266, 359, 711, 951, 1486, 2866, 3030, 3186
HapII	CCGG	6 cut(s)	125, 486, 627, 1716, 2117, 3495
HgaI	GACGC	1 cut(s)	2462
HhaI	GCGC	7 cut(s)	26, 51, 408, 414, 618, 1948, 2130
Hin6I	GCGC	7 cut(s)	24, 49, 406, 412, 616, 1946, 2128
HinP1I	GCGC	7 cut(s)	24, 49, 406, 412, 616, 1946, 2128
HincII	GTYRAC	7 cut(s)	40, 2287, 2356, 3051, 3523, 3655, 3705
HindII	GTYRAC	7 cut(s)	40, 2287, 2356, 3051, 3523, 3655, 3705
HindIII	AAGCTT	1 cut(s)	3010
HpaI	GTTAAC	2 cut(s)	40, 3655
HpaII	CCGG	6 cut(s)	125, 486, 627, 1716, 2117, 3495
HphI	GGTGA	2 cut(s)	806, 1097
Hpy99I	CGWCG	6 cut(s)	12, 15, 332, 341, 1212, 2456
HpyCH4III	ACNGT	7 cut(s)	391, 470, 1431, 1615, 1961, 2784, 3350
HpyCH4IV	ACGT	4 cut(s)	7, 1246, 2626, 3277
HpyF10VI	GCNNNNNNNGC	5 cut(s)	414, 1680, 1742, 3069, 3536
HpySE526I	ACGT	4 cut(s)	7, 1246, 2626, 3277
HspAI	GCGC	7 cut(s)	24, 49, 406, 412, 616, 1946, 2128
KflI	GGGWCCC	1 cut(s)	2852
Kpn2I	TCCGGA	1 cut(s)	2116
KspAI	GTTAAC	2 cut(s)	40, 3655
KspI	CCGCGG	1 cut(s)	418
Kzo9I	GATC	9 cut(s)	181, 187, 237, 898, 1066, 2478, 2538, 3139, 3169
Lsp1109I	GCAGC	8 cut(s)	742, 1667, 1867, 1889, 2443, 3556, 3559, 3583
MabI	ACCWGGT	1 cut(s)	2332
MaeII	ACGT	4 cut(s)	7, 1246, 2626, 3277
MalI	GATC	9 cut(s)	183, 189, 239, 900, 1068, 2480, 2540, 3141, 3171
MbiI	CCGCTC	1 cut(s)	648
MboI	GATC	9 cut(s)	181, 187, 237, 898, 1066, 2478, 2538, 3139, 3169
MfeI	CAATTG	3 cut(s)	1949, 2553, 2829
MhlI	GDGCHC	3 cut(s)	767, 1738, 2691
MlsI	TGGCCA	2 cut(s)	359, 951
MluNI	TGGCCA	2 cut(s)	359, 951
MlyI	GAGTC	7 cut(s)	585, 1919, 2492, 2723, 3484, 3725, 3734
MmeI	TCCRAC	1 cut(s)	3421
Mox20I	TGGCCA	2 cut(s)	359, 951
Mph1103I	ATGCAT	1 cut(s)	1131
MroI	TCCGGA	1 cut(s)	2116
MroXI	GAANNNNTTC	3 cut(s)	2947, 3318, 3361
MscI	TGGCCA	2 cut(s)	359, 951
Msp20I	TGGCCA	2 cut(s)	359, 951
MspA1I	CMGCKG	2 cut(s)	417, 1880
MspCI	CTTAAG	1 cut(s)	1988
MspI	CCGG	6 cut(s)	125, 486, 627, 1716, 2117, 3495
MunI	CAATTG	3 cut(s)	1949, 2553, 2829
Mva1269I	GAATGC	1 cut(s)	2179
MvaI	CCWGG	7 cut(s)	268, 882, 1895, 2042, 2222, 2334, 3583
MvnI	CGCG	3 cut(s)	417, 618, 2244
MwoI	GCNNNNNNNGC	5 cut(s)	414, 1680, 1742, 3069, 3536
NciI	CCSGG	4 cut(s)	125, 126, 1717, 3495
NdeI	CATATG	3 cut(s)	1659, 3426, 3601
NdeII	GATC	9 cut(s)	181, 187, 237, 898, 1066, 2478, 2538, 3139, 3169
NheI	GCTAGC	2 cut(s)	2150, 3382
NlaIV	GGNNCC	6 cut(s)	130, 625, 1581, 1714, 2853, 2854
NmuCI	GTSAC	7 cut(s)	3, 1333, 1963, 2548, 2794, 3469, 3710
NsbI	TGCGCA	1 cut(s)	1947
NsiI	ATGCAT	1 cut(s)	1131
NspI	RCATGY	5 cut(s)	698, 1133, 1687, 2463, 3435
NspV	TTCGAA	2 cut(s)	2095, 3591
PacI	TTAATTAA	1 cut(s)	2031
PaeI	GCATGC	3 cut(s)	1133, 1687, 3435
PagI	TCATGA	2 cut(s)	2428, 2874
PciI	ACATGT	1 cut(s)	694
PcsI	WCGNNNNNNNCGW	2 cut(s)	333, 336
PctI	GAATGC	1 cut(s)	2179
PdmI	GAANNNNTTC	3 cut(s)	2947, 3318, 3361
PflMI	CCANNNNNTGG	2 cut(s)	223, 1832
PfoI	TCCNGGA	1 cut(s)	2220
PleI	GAGTC	7 cut(s)	585, 1919, 2491, 2722, 3484, 3724, 3734
PpsI	GAGTC	7 cut(s)	585, 1919, 2491, 2722, 3484, 3724, 3734
PpuMI	RGGWCCY	1 cut(s)	2852
PscI	ACATGT	1 cut(s)	694
PshBI	ATTAAT	1 cut(s)	2255
Psp124BI	GAGCTC	1 cut(s)	2691
Psp5II	RGGWCCY	1 cut(s)	2852
Psp6I	CCWGG	7 cut(s)	266, 880, 1893, 2040, 2220, 2332, 3581
PspEI	GGTNACC	2 cut(s)	1154, 3682
PspFI	CCCAGC	1 cut(s)	119
PspGI	CCWGG	7 cut(s)	266, 880, 1893, 2040, 2220, 2332, 3581
PspN4I	GGNNCC	6 cut(s)	130, 625, 1581, 1714, 2853, 2854
PspPI	GGNCC	5 cut(s)	264, 419, 1485, 2852, 3029
PspPPI	RGGWCCY	1 cut(s)	2852
PstI	CTGCAG	1 cut(s)	3115
PstNI	CAGNNNCTG	2 cut(s)	1337, 3218
PvuII	CAGCTG	1 cut(s)	1880
SacI	GAGCTC	1 cut(s)	2691
SacII	CCGCGG	1 cut(s)	418
Sau3AI	GATC	9 cut(s)	181, 187, 237, 898, 1066, 2478, 2538, 3139, 3169
Sau96I	GGNCC	5 cut(s)	264, 419, 1485, 2852, 3029
ScaI	AGTACT	1 cut(s)	1539
SchI	GAGTC	7 cut(s)	585, 1919, 2492, 2723, 3484, 3725, 3734
SduI	GDGCHC	3 cut(s)	767, 1738, 2691
SexAI	ACCWGGT	1 cut(s)	2332
SfcI	CTRYAG	2 cut(s)	1636, 3111
Sfr303I	CCGCGG	1 cut(s)	418
SfuI	TTCGAA	2 cut(s)	2095, 3591
SgrBI	CCGCGG	1 cut(s)	418
SinI	GGWCC	2 cut(s)	419, 2852
SmaI	CCCGGG	1 cut(s)	126
SmlI	CTYRAG	4 cut(s)	713, 1988, 2053, 3776
SmoI	CTYRAG	4 cut(s)	713, 1988, 2053, 3776
SpeI	ACTAGT	4 cut(s)	523, 1495, 1564, 3707
SphI	GCATGC	3 cut(s)	1133, 1687, 3435
SspI	AATATT	2 cut(s)	790, 2668
SstI	GAGCTC	1 cut(s)	2691
StyI	CCWWGG	1 cut(s)	844
TaaI	ACNGT	7 cut(s)	391, 470, 1431, 1615, 1961, 2784, 3350
TaiI	ACGT	4 cut(s)	10, 1249, 2629, 3280
TatI	WGTACW	3 cut(s)	246, 1537, 3191
TauI	GCSGC	6 cut(s)	417, 621, 624, 651, 2207, 2264
TscAI	CASTG	7 cut(s)	475, 1338, 1459, 1964, 3031, 3267, 3353
TseFI	GTSAC	7 cut(s)	3, 1333, 1963, 2548, 2794, 3469, 3710
TseI	GCWGC	8 cut(s)	755, 1680, 1877, 1880, 2456, 3569, 3572, 3596
Tsp45I	GTSAC	7 cut(s)	3, 1333, 1963, 2548, 2794, 3469, 3710
TspDTI	ATGAA	9 cut(s)	1038, 1094, 2306, 2445, 2619, 2634, 2871, 2910, 3282
TspGWI	ACGGA	3 cut(s)	652, 827, 3218
TspMI	CCCGGG	1 cut(s)	124
TspRI	CASTG	7 cut(s)	475, 1338, 1459, 1964, 3031, 3267, 3353
Van91I	CCANNNNNTGG	2 cut(s)	223, 1832
Vha464I	CTTAAG	1 cut(s)	1988
VneI	GTGCAC	1 cut(s)	1734
VpaK11BI	GGWCC	2 cut(s)	419, 2852
VspI	ATTAAT	1 cut(s)	2255
XagI	CCTNNNNNAGG	3 cut(s)	805, 2337, 2430
XapI	RAATTY	7 cut(s)	658, 937, 1351, 1592, 1811, 2090, 3587
XbaI	TCTAGA	1 cut(s)	1783
XceI	RCATGY	5 cut(s)	698, 1133, 1687, 2463, 3435
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3443
XmaI	CCCGGG	1 cut(s)	124
XmiI	GTMKAC	2 cut(s)	2605, 3719
XmnI	GAANNNNTTC	3 cut(s)	2947, 3318, 3361
ZrmI	AGTACT	1 cut(s)	1539
Zsp2I	ATGCAT	1 cut(s)	1131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.