RchiOBHm_Chr6g0255211

fatty acid beta-oxidation multifunctional protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
10545904 .. 10548423
2520 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 201 bp
ATGCCACTTTTGGAAATTGTCCACACTAATCAGATATCTCCACAAGTTATTGTTGATTTGCTAGAAGTTGGGAAGAAGATAAAGAAAACCCCAGTTGTTGTTGGGAACTGCACTGGATTTGCTGCTGTCATAGAAGAAAAGCGAGCACCCCATGCAGTGAAGGCTTACGCCAAGGATGACCCGTTCAATCCTACAAGTTGA

Protein Analysis

66

Amino Acids

7.17

Weight (kDa)

7.9

Isoelectric Point (pI)

41.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 187
AloI GAACNNNNNNTCC 2 cut(s) 167, 199
Alw21I GWGCWC 1 cut(s) 148
ApeKI GCWGC 1 cut(s) 122
Bbv12I GWGCWC 1 cut(s) 148
BbvI GCAGC 1 cut(s) 109
BfaI CTAG 1 cut(s) 62
BisI GCNGC 1 cut(s) 123
BlsI GCNGC 1 cut(s) 124
BmrI ACTGGG 1 cut(s) 86
BmuI ACTGGG 1 cut(s) 86
BsaJI CCNNGG 1 cut(s) 171
Bse1I ACTGG 2 cut(s) 92, 118
BseDI CCNNGG 1 cut(s) 171
BseGI GGATG 1 cut(s) 181
BseNI ACTGG 2 cut(s) 92, 118
BseXI GCAGC 1 cut(s) 109
BsgI GTGCAG 1 cut(s) 94
BsiHKAI GWGCWC 1 cut(s) 148
Bsp1286I GDGCHC 1 cut(s) 148
BsrI ACTGG 2 cut(s) 92, 118
BssECI CCNNGG 1 cut(s) 171
BssT1I CCWWGG 1 cut(s) 171
BstAPI GCANNNNNTGC 1 cut(s) 152
BstC8I GCNNGC 1 cut(s) 144
BstF5I GGATG 1 cut(s) 181
BstMWI GCNNNNNNNGC 2 cut(s) 152, 161
BstV1I GCAGC 1 cut(s) 109
BtsCI GGATG 1 cut(s) 181
BtsI GCAGTG 1 cut(s) 162
BtsIMutI CAGTG 2 cut(s) 111, 162
Cac8I GCNNGC 1 cut(s) 144
CviAII CATG 1 cut(s) 152
CviJI RGCY 1 cut(s) 164
CviKI_1 RGCY 1 cut(s) 164
Eco130I CCWWGG 1 cut(s) 171
Eco32I GATATC 1 cut(s) 36
EcoRV GATATC 1 cut(s) 36
EcoT14I CCWWGG 1 cut(s) 171
ErhI CCWWGG 1 cut(s) 171
FaeI CATG 1 cut(s) 155
FaiI YATR 2 cut(s) 131, 153
FatI CATG 1 cut(s) 151
Fnu4HI GCNGC 1 cut(s) 123
FokI GGATG 1 cut(s) 188
Fsp4HI GCNGC 1 cut(s) 123
FspBI CTAG 1 cut(s) 62
GluI GCNGC 1 cut(s) 123
Hin1II CATG 1 cut(s) 155
Hpy166II GTNNAC 1 cut(s) 22
Hpy188I TCNGA 1 cut(s) 33
Hpy8I GTNNAC 1 cut(s) 22
HpyAV CCTTC 1 cut(s) 154
HpyCH4V TGCA 2 cut(s) 111, 155
HpyF10VI GCNNNNNNNGC 2 cut(s) 152, 161
Hsp92II CATG 1 cut(s) 155
LpnPI CCDG 2 cut(s) 99, 105
Lsp1109I GCAGC 1 cut(s) 109
MaeI CTAG 1 cut(s) 62
MboII GAAGA 3 cut(s) 85, 88, 146
MhlI GDGCHC 1 cut(s) 148
MluCI AATT 1 cut(s) 15
MwoI GCNNNNNNNGC 2 cut(s) 152, 161
NlaIII CATG 1 cut(s) 155
PkrI GCNGC 1 cut(s) 124
SatI GCNGC 1 cut(s) 123
SduI GDGCHC 1 cut(s) 148
SgeI CNNG 8 cut(s) 56, 74, 104, 126, 155, 164, 184, 193
Sse9I AATT 1 cut(s) 15
SspMI CTAG 1 cut(s) 62
StyI CCWWGG 1 cut(s) 171
TasI AATT 1 cut(s) 15
TscAI CASTG 2 cut(s) 118, 162
TseI GCWGC 1 cut(s) 122
TspRI CASTG 2 cut(s) 118, 162
XspI CTAG 1 cut(s) 62
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.