RchiOBHm_Chr6g0311181

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
68226693 .. 68230124
3432 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1557 bp
ATGGGTCTGACCGGCACCATGGAAACACTCACCGTGAGGTCCATGAGCTTAAGTACTGAAGATTCAGAACCACATAACAAGTCTAACGGGTTTGACTATAAGAAAAGTACGGAAAGGTCAATGGGCTTCAAGAAACGGGAACCCAAAGAAGAAAAACTCAAAACAGCATCTGATACATTTGATGAGAAATTACATTCAGATTCTTCAGTTGGTAGAAACTGTGAAAAAATGCAGATAAAGAAACCCACAATACTGCTTCCTGAACCAATCATGTTGTTTTCTCCAAAGCCGGCGTCTAGTGAGCGCGATGCTGCAGCAACTAGGCTTCAGAAAGTGTACAAGAGTTACAGGACTCGGCGCAACCTCGCAGATTGTGCTGTTGTGGTTGAGGAACTATGGTGGAAAGCCGTAGAGTTGGCAGCTCTGGAAAGAAGCTCAGTGTCATTCTTCGACATTGAGAAACATGAAACTGCTGTGTCAAAGTGGACAAGAGCTAGGAAAAGGGCAGCTAAGTTAGGGAAGGGGTTGTGCAAGGATGAGAAGGCTCAGAAACTAGCCCTGCAGCATTGGCTTGAAGCTATTGATCCACGCCATCGGTATGGACACAATTTGCAATTCTACTATGATGTGTGGACTGCTTGCAAGAGCACTCAACCTTTCTTCTACTGGTTGGATGTTGGTGATGGTAAAGACACAAATGTCAAGAAGTGTCCGAGGCCTGATCTCCAACGCCAGTGCATCAAATATCTTGAACCAAGAGAGAGACAAGCATATGAAGTGATTGTAGAGGAGGGAAAGCTAGTGCAAAAGCAATCAGGGTTCCTTGTTGACACAGACGAAGGGTCAAAGTGGATATTTGTGCTGAGCACATCAAGGTCTTTATATGTAGGCCAGAAAAAGAAAGGTGTTTTTCAGCATTCAAGTTTCCTCTCTGGAGGGGCTACTACTGCAGCTGGAAGACTAGTTGCTCATAATGGGGTTCTTGAGGCTATATGGCCATACAGTGGTCACTATCTTCCAACCGCAGACAACTTCAAGGAATTCATTAGCTTCCTGAAAGAGCACAATGTAGACCTCACCAATGTCAAGATGTATGCTGTTGATGAAGACAAAGCATATCAAAATGAGGAGTTCTCTAAGCCAGAGGTGACTGGTTCATCCACAACCAAAGTGACCTTGGATGATTCTAGTAGTGGTGTTGCCATTGAAGTTCCAGCAGATCATCATCAACAACAACAACTTGAGAGTAATGGGAGCAGTTCAAGTAGTAATGCAGATGAAGCAGAAGAAGAACAAGCACAAGCATTTGACATGTCAAAGCGTCTGGCTTGCAAGTGGAGCAGTGGCATTGGGCCACGTATTGGGTGTGTGAGGGACTATCCAGCTGACCTTCAATCCCTAGCTCTTGAGAAAGTCAATCTATCACCAAGAGTCTCATTGGGCCGCCATGAAAGTTATGCCCCAATCCCTTCACCTAGACCAAGCCCAAAGATCAGGGTCTCACCTAGGCTTTCCTATATGGGCCTCCCCAGCCCAAGGGTACCCAATTCCAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

518

Amino Acids

58.35

Weight (kDa)

8.74

Isoelectric Point (pI)

53.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 698
Acc65I GGTACC 1 cut(s) 1540
AccB1I GGYRCC 2 cut(s) 14, 1540
AccB7I CCANNNNNTGG 2 cut(s) 1004, 1361
AccI GTMKAC 1 cut(s) 1071
AccII CGCG 1 cut(s) 306
AciI CCGC 2 cut(s) 1023, 1444
AclWI GGATC 1 cut(s) 578
AcoI YGGCCR 1 cut(s) 995
AcsI RAATTY 1 cut(s) 1040
AcuI CTGAAG 3 cut(s) 78, 189, 311
AcyI GRCGYC 1 cut(s) 293
AfaI GTAC 4 cut(s) 55, 109, 338, 1542
AfiI CCNNNNNNNGG 3 cut(s) 1004, 1361, 1536
AflII CTTAAG 1 cut(s) 49
AflIII ACRYGT 1 cut(s) 1311
AgsI TTSAA 8 cut(s) 130, 575, 752, 921, 1036, 1208, 1263, 1394
AhdI GACNNNNNGTC 1 cut(s) 841
AhlI ACTAGT 1 cut(s) 961
Alw21I GWGCWC 3 cut(s) 650, 869, 1065
Alw26I GTCTC 3 cut(s) 757, 1438, 1504
AlwI GGATC 1 cut(s) 578
AlwNI CAGNNNCTG 1 cut(s) 170
AoxI GGCC 6 cut(s) 716, 889, 995, 1352, 1441, 1522
ApeKI GCWGC 6 cut(s) 311, 314, 419, 506, 562, 950
ApoI RAATTY 1 cut(s) 1040
ArsI GACNNNNNNTTYG 2 cut(s) 278, 310
Asp718I GGTACC 1 cut(s) 1540
AspA2I CCTAGG 1 cut(s) 1505
AspLEI GCGC 2 cut(s) 306, 360
AspS9I GGNCC 4 cut(s) 39, 1352, 1441, 1522
AsuHPI GGTGA 7 cut(s) 22, 692, 1069, 1159, 1416, 1464, 1494
AvaII GGWCC 1 cut(s) 39
AvrII CCTAGG 1 cut(s) 1505
BalI TGGCCA 1 cut(s) 997
BanI GGYRCC 2 cut(s) 14, 1540
BbsI GAAGAC 2 cut(s) 964, 1113
Bbv12I GWGCWC 3 cut(s) 650, 869, 1065
BbvI GCAGC 6 cut(s) 298, 326, 431, 518, 574, 962
BccI CCATC 2 cut(s) 600, 677
BceAI ACGGC 1 cut(s) 392
BcoDI GTCTC 3 cut(s) 757, 1438, 1504
BcuI ACTAGT 1 cut(s) 961
BfmI CTRYAG 3 cut(s) 312, 560, 948
BfrI CTTAAG 1 cut(s) 49
BisI GCNGC 7 cut(s) 312, 315, 420, 507, 563, 951, 1444
BlnI CCTAGG 1 cut(s) 1505
BlpI GCTNAGC 1 cut(s) 863
BlsI GCNGC 7 cut(s) 313, 316, 421, 508, 564, 952, 1445
BmcAI AGTACT 1 cut(s) 55
Bme18I GGWCC 1 cut(s) 39
BmeRI GACNNNNNGTC 1 cut(s) 841
BmgT120I GGNCC 4 cut(s) 39, 1352, 1441, 1522
BmiI GGNNCC 4 cut(s) 16, 141, 821, 1542
BmsI GCATC 3 cut(s) 176, 298, 747
BpiI GAAGAC 2 cut(s) 964, 1113
BplI GAGNNNNNCTC 2 cut(s) 1118, 1150
BpmI CTGGAG 1 cut(s) 954
Bpu1102I GCTNAGC 1 cut(s) 863
BpuEI CTTGAG 3 cut(s) 1004, 1262, 1427
BsaAI YACGTR 1 cut(s) 1358
BsaBI GATNNNNATC 1 cut(s) 1224
BsaHI GRCGYC 1 cut(s) 293
BsaI GGTCTC 1 cut(s) 1504
BsaJI CCNNGG 5 cut(s) 18, 713, 1176, 1505, 1535
Bsc4I CCNNNNNNNGG 3 cut(s) 1004, 1361, 1536
Bse118I RCCGGY 2 cut(s) 11, 289
Bse1I ACTGG 3 cut(s) 671, 733, 1156
Bse8I GATNNNNATC 1 cut(s) 1224
BseDI CCNNGG 5 cut(s) 18, 713, 1176, 1505, 1535
BseGI GGATG 4 cut(s) 541, 679, 1157, 1186
BseJI GATNNNNATC 1 cut(s) 1224
BseLI CCNNNNNNNGG 3 cut(s) 1004, 1361, 1536
BseMII CTCAG 3 cut(s) 450, 560, 854
BseNI ACTGG 3 cut(s) 671, 733, 1156
BseRI GAGGAG 2 cut(s) 803, 1142
BseXI GCAGC 6 cut(s) 298, 326, 431, 518, 574, 962
BseYI CCCAGC 1 cut(s) 1529
Bsh1236I CGCG 1 cut(s) 306
BshFI GGCC 6 cut(s) 718, 891, 997, 1354, 1443, 1524
BshNI GGYRCC 2 cut(s) 14, 1540
BsiHKAI GWGCWC 3 cut(s) 650, 869, 1065
BsiSI CCGG 2 cut(s) 12, 290
BslFI GGGAC 1 cut(s) 1388
BslI CCNNNNNNNGG 3 cut(s) 1004, 1361, 1536
BsmAI GTCTC 3 cut(s) 757, 1438, 1504
BsmFI GGGAC 1 cut(s) 1388
BsmI GAATGC 1 cut(s) 916
BsnI GGCC 6 cut(s) 718, 891, 997, 1354, 1443, 1524
Bso31I GGTCTC 1 cut(s) 1504
Bsp1286I GDGCHC 3 cut(s) 650, 869, 1065
Bsp1407I TGTACA 1 cut(s) 336
Bsp143I GATC 4 cut(s) 583, 721, 1219, 1491
Bsp1720I GCTNAGC 1 cut(s) 863
Bsp19I CCATGG 1 cut(s) 18
BspACI CCGC 2 cut(s) 1023, 1444
BspANI GGCC 6 cut(s) 718, 891, 997, 1354, 1443, 1524
BspCNI CTCAG 3 cut(s) 449, 559, 855
BspFNI CGCG 1 cut(s) 306
BspLI GGNNCC 4 cut(s) 16, 141, 821, 1542
BspMAI CTGCAG 3 cut(s) 316, 564, 952
BspPI GGATC 1 cut(s) 578
BspT107I GGYRCC 2 cut(s) 14, 1540
BspTI CTTAAG 1 cut(s) 49
BspTNI GGTCTC 1 cut(s) 1504
BsrFI RCCGGY 2 cut(s) 11, 289
BsrGI TGTACA 1 cut(s) 336
BsrI ACTGG 3 cut(s) 671, 733, 1156
BssAI RCCGGY 2 cut(s) 11, 289
BssECI CCNNGG 5 cut(s) 18, 713, 1176, 1505, 1535
BssMI GATC 4 cut(s) 583, 721, 1219, 1491
BssNI GRCGYC 1 cut(s) 293
BssT1I CCWWGG 4 cut(s) 18, 1176, 1505, 1535
Bst4CI ACNGT 3 cut(s) 34, 221, 1004
BstACI GRCGYC 1 cut(s) 293
BstAFI CTTAAG 1 cut(s) 49
BstAPI GCANNNNNTGC 1 cut(s) 374
BstAUI TGTACA 1 cut(s) 336
BstBAI YACGTR 1 cut(s) 1358
BstC8I GCNNGC 3 cut(s) 291, 640, 1330
BstDEI CTNAG 5 cut(s) 436, 510, 546, 863, 1137
BstDSI CCRYGG 1 cut(s) 18
BstF5I GGATG 4 cut(s) 541, 679, 1157, 1186
BstFNI CGCG 1 cut(s) 306
BstHHI GCGC 2 cut(s) 306, 360
BstKTI GATC 4 cut(s) 586, 724, 1222, 1494
BstMAI GTCTC 3 cut(s) 757, 1438, 1504
BstMBI GATC 4 cut(s) 583, 721, 1219, 1491
BstMWI GCNNNNNNNGC 6 cut(s) 374, 568, 947, 1280, 1338, 1530
BstNSI RCATGY 1 cut(s) 1315
BstSFI CTRYAG 3 cut(s) 312, 560, 948
BstUI CGCG 1 cut(s) 306
BstV1I GCAGC 6 cut(s) 298, 326, 431, 518, 574, 962
BstV2I GAAGAC 2 cut(s) 964, 1113
BstXI CCANNNNNNTGG 1 cut(s) 599
BsuRI GGCC 6 cut(s) 718, 891, 997, 1354, 1443, 1524
BtgI CCRYGG 1 cut(s) 18
BtgZI GCGATG 1 cut(s) 321
BtsCI GGATG 4 cut(s) 541, 679, 1157, 1186
BtsI GCAGTG 1 cut(s) 1348
BtsIMutI CAGTG 4 cut(s) 444, 740, 1009, 1348
Cac8I GCNNGC 3 cut(s) 291, 640, 1330
CaiI CAGNNNCTG 1 cut(s) 170
CfoI GCGC 2 cut(s) 306, 360
Cfr10I RCCGGY 2 cut(s) 11, 289
Cfr13I GGNCC 4 cut(s) 39, 1352, 1441, 1522
CseI GACGC 2 cut(s) 282, 1310
Csp6I GTAC 4 cut(s) 54, 108, 337, 1541
CviAII CATG 6 cut(s) 19, 43, 271, 464, 1312, 1448
CviQI GTAC 4 cut(s) 54, 108, 337, 1541
DdeI CTNAG 5 cut(s) 436, 510, 546, 863, 1137
DpnI GATC 4 cut(s) 585, 723, 1221, 1493
DpnII GATC 4 cut(s) 583, 721, 1219, 1491
DrdI GACNNNNNNGTC 1 cut(s) 698
DriI GACNNNNNGTC 1 cut(s) 841
DseDI GACNNNNNNGTC 1 cut(s) 698
EaeI YGGCCR 1 cut(s) 995
Eam1105I GACNNNNNGTC 1 cut(s) 841
Eco130I CCWWGG 4 cut(s) 18, 1176, 1505, 1535
Eco147I AGGCCT 1 cut(s) 718
Eco31I GGTCTC 1 cut(s) 1504
Eco47I GGWCC 1 cut(s) 39
Eco57I CTGAAG 3 cut(s) 78, 189, 311
EcoRI GAATTC 1 cut(s) 1040
EcoT14I CCWWGG 4 cut(s) 18, 1176, 1505, 1535
ErhI CCWWGG 4 cut(s) 18, 1176, 1505, 1535
FaeI CATG 6 cut(s) 22, 46, 274, 467, 1315, 1451
FaqI GGGAC 1 cut(s) 1388
FatI CATG 6 cut(s) 18, 42, 270, 463, 1311, 1447
FauNDI CATATG 1 cut(s) 772
FblI GTMKAC 1 cut(s) 1071
Fnu4HI GCNGC 7 cut(s) 312, 315, 420, 507, 563, 951, 1444
FokI GGATG 4 cut(s) 548, 686, 1144, 1193
Fsp4HI GCNGC 7 cut(s) 312, 315, 420, 507, 563, 951, 1444
GlaI GCGC 2 cut(s) 305, 359
GluI GCNGC 7 cut(s) 312, 315, 420, 507, 563, 951, 1444
GsaI CCCAGC 1 cut(s) 1533
GsuI CTGGAG 1 cut(s) 954
HaeIII GGCC 6 cut(s) 718, 891, 997, 1354, 1443, 1524
HapII CCGG 2 cut(s) 12, 290
HgaI GACGC 2 cut(s) 282, 1310
HhaI GCGC 2 cut(s) 306, 360
Hin1I GRCGYC 1 cut(s) 293
Hin1II CATG 6 cut(s) 22, 46, 274, 467, 1315, 1451
Hin6I GCGC 2 cut(s) 304, 358
HinP1I GCGC 2 cut(s) 304, 358
HincII GTYRAC 1 cut(s) 829
HindII GTYRAC 1 cut(s) 829
HinfI GANTC 5 cut(s) 62, 200, 352, 1184, 1431
HpaII CCGG 2 cut(s) 12, 290
HphI GGTGA 7 cut(s) 22, 692, 1069, 1159, 1416, 1464, 1494
Hpy166II GTNNAC 5 cut(s) 337, 486, 633, 829, 1072
Hpy188I TCNGA 7 cut(s) 9, 67, 172, 199, 330, 549, 714
Hpy8I GTNNAC 5 cut(s) 337, 486, 633, 829, 1072
HpyAV CCTTC 5 cut(s) 514, 535, 833, 1400, 1479
HpyCH4III ACNGT 3 cut(s) 34, 221, 1004
HpyCH4IV ACGT 1 cut(s) 1357
HpyF10VI GCNNNNNNNGC 6 cut(s) 374, 568, 947, 1280, 1338, 1530
HpyF3I CTNAG 5 cut(s) 436, 510, 546, 863, 1137
HpySE526I ACGT 1 cut(s) 1357
Hsp92I GRCGYC 1 cut(s) 293
Hsp92II CATG 6 cut(s) 22, 46, 274, 467, 1315, 1451
HspAI GCGC 2 cut(s) 304, 358
KpnI GGTACC 1 cut(s) 1544
KroI GCCGGC 1 cut(s) 289
KroNI GCCGGC 1 cut(s) 291
Kzo9I GATC 4 cut(s) 583, 721, 1219, 1491
LmnI GCTCC 2 cut(s) 1254, 1338
Lsp1109I GCAGC 6 cut(s) 298, 326, 431, 518, 574, 962
LweI GCATC 3 cut(s) 176, 298, 747
MaeII ACGT 1 cut(s) 1357
MaeIII GTNAC 4 cut(s) 344, 1007, 1147, 1171
MalI GATC 4 cut(s) 585, 723, 1221, 1493
MboI GATC 4 cut(s) 583, 721, 1219, 1491
MhlI GDGCHC 3 cut(s) 650, 869, 1065
MlsI TGGCCA 1 cut(s) 997
MluCI AATT 6 cut(s) 188, 607, 614, 1040, 1546, 1552
MluNI TGGCCA 1 cut(s) 997
MlyI GAGTC 2 cut(s) 346, 1440
MmeI TCCRAC 3 cut(s) 651, 751, 1043
Mox20I TGGCCA 1 cut(s) 997
MroNI GCCGGC 1 cut(s) 289
MscI TGGCCA 1 cut(s) 997
MseI TTAA 1 cut(s) 50
MslI CAYNNNNRTG 1 cut(s) 597
Msp20I TGGCCA 1 cut(s) 997
MspA1I CMGCKG 2 cut(s) 953, 1385
MspCI CTTAAG 1 cut(s) 49
MspI CCGG 2 cut(s) 12, 290
Mva1269I GAATGC 1 cut(s) 916
MvnI CGCG 1 cut(s) 306
MwoI GCNNNNNNNGC 6 cut(s) 374, 568, 947, 1280, 1338, 1530
NaeI GCCGGC 1 cut(s) 291
NcoI CCATGG 1 cut(s) 18
NdeI CATATG 1 cut(s) 772
NdeII GATC 4 cut(s) 583, 721, 1219, 1491
NgoMIV GCCGGC 1 cut(s) 289
NlaIII CATG 6 cut(s) 22, 46, 274, 467, 1315, 1451
NlaIV GGNNCC 4 cut(s) 16, 141, 821, 1542
NmeAIII GCCGAG 1 cut(s) 334
NmuCI GTSAC 3 cut(s) 1007, 1147, 1171
NspI RCATGY 1 cut(s) 1315
PceI AGGCCT 1 cut(s) 718
PciI ACATGT 1 cut(s) 1311
PctI GAATGC 1 cut(s) 916
PdiI GCCGGC 1 cut(s) 291
PfeI GAWTC 3 cut(s) 62, 200, 1184
PflMI CCANNNNNTGG 2 cut(s) 1004, 1361
PkrI GCNGC 7 cut(s) 313, 316, 421, 508, 564, 952, 1445
PleI GAGTC 2 cut(s) 346, 1439
PpsI GAGTC 2 cut(s) 346, 1439
Ppu21I YACGTR 1 cut(s) 1358
PscI ACATGT 1 cut(s) 1311
PspFI CCCAGC 1 cut(s) 1529
PspN4I GGNNCC 4 cut(s) 16, 141, 821, 1542
PspPI GGNCC 4 cut(s) 39, 1352, 1441, 1522
PstI CTGCAG 3 cut(s) 316, 564, 952
PstNI CAGNNNCTG 1 cut(s) 170
PvuII CAGCTG 2 cut(s) 953, 1385
RsaI GTAC 4 cut(s) 55, 109, 338, 1542
RsaNI GTAC 4 cut(s) 54, 108, 337, 1541
RseI CAYNNNNRTG 1 cut(s) 597
SaqAI TTAA 1 cut(s) 50
SatI GCNGC 7 cut(s) 312, 315, 420, 507, 563, 951, 1444
Sau3AI GATC 4 cut(s) 583, 721, 1219, 1491
Sau96I GGNCC 4 cut(s) 39, 1352, 1441, 1522
ScaI AGTACT 1 cut(s) 55
SchI GAGTC 2 cut(s) 346, 1440
SduI GDGCHC 3 cut(s) 650, 869, 1065
SfaNI GCATC 3 cut(s) 176, 298, 747
SfcI CTRYAG 3 cut(s) 312, 560, 948
SinI GGWCC 1 cut(s) 39
SmiMI CAYNNNNRTG 1 cut(s) 597
SmlI CTYRAG 4 cut(s) 49, 983, 1241, 1406
SmoI CTYRAG 4 cut(s) 49, 983, 1241, 1406
SpeI ACTAGT 1 cut(s) 961
Sse9I AATT 6 cut(s) 188, 607, 614, 1040, 1546, 1552
SseBI AGGCCT 1 cut(s) 718
SsiI CCGC 2 cut(s) 1023, 1444
StuI AGGCCT 1 cut(s) 718
StyI CCWWGG 4 cut(s) 18, 1176, 1505, 1535
TaaI ACNGT 3 cut(s) 34, 221, 1004
TaiI ACGT 1 cut(s) 1360
TaqI TCGA 1 cut(s) 450
TasI AATT 6 cut(s) 188, 607, 614, 1040, 1546, 1552
TatI WGTACW 2 cut(s) 53, 336
TauI GCSGC 1 cut(s) 1446
TfiI GAWTC 3 cut(s) 62, 200, 1184
Tru1I TTAA 1 cut(s) 50
Tru9I TTAA 1 cut(s) 50
TscAI CASTG 4 cut(s) 444, 740, 1009, 1348
TseFI GTSAC 3 cut(s) 1007, 1147, 1171
TseI GCWGC 6 cut(s) 311, 314, 419, 506, 562, 950
Tsp45I GTSAC 3 cut(s) 1007, 1147, 1171
TspDTI ATGAA 7 cut(s) 480, 789, 1033, 1119, 1146, 1293, 1464
TspGWI ACGGA 1 cut(s) 125
TspRI CASTG 4 cut(s) 444, 740, 1009, 1348
Van91I CCANNNNNTGG 2 cut(s) 1004, 1361
Vha464I CTTAAG 1 cut(s) 49
VpaK11BI GGWCC 1 cut(s) 39
XapI RAATTY 1 cut(s) 1040
XceI RCATGY 1 cut(s) 1315
XcmI CCANNNNNNNNNTGG 1 cut(s) 1174
XmaJI CCTAGG 1 cut(s) 1505
XmiI GTMKAC 1 cut(s) 1071
ZrmI AGTACT 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.