Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007251

Physical Location & Seq

Genomic Coordinates Reverse (-)

79942365 .. 79948134

Gene Structure 5770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGATGCGGTGGCGGAAGGGCTGTGGGGGTTGGCGGACTACCAGGAGCAGAGCGGCGAGATCGGCAAAGCCGTCAAGTGCCTGGAAGCCATCTGCCAAAGCGACGTGTCGTTTTTCCCCATCGTCGAGGTCAAGACCCGTCTCCGAATCGCTACTCTTCTCCTCAAGCACTCCCACAACGTCAACCACGCCAAGGCTCACTTGGAGCGCGCGCAGTTGCTCCTCAAATCCATTCCTTCCTGTTTTGATTTGAAGTGCAGAGCTTACAGTCTGCTCAGCCAGTGTTACCATCTCGTCGGCTCCATAGCTCCTCAGAAACAGGTCCTCCACAAGGCCCTGGAGCTCACCGCTAGCGGCTACGATATTGCAGTGAAGTTATGGTCTTGCAACTTCAATTCGCAGCTGGCGAATGCGTTGATTATTGAGGGAGACTACCAGAGTTCGATTGCGGCATTGGACGCTGGCTATGTTTGCGCTACTCAGATAGGTTATCCTGAGTTGCAGATGTTCTTTGCAACTTGTATGCTCCATGTACATCTCATGCACTGGGAGGATGAGAGTTCAGTTGAGCGAGCTGCTGCCAAATGCGATGAGGTCTGGGAGTTCCTTGACCCCCAGAAAAAACAACTATGCCTTGGCTTATTCTTCTACAATGAACTGCTGCACATATTTTATCGCCTCCGAGTATGTGACTACAAGAATGCTACACCACACATAGAAAGATTGGATGCTGCCATGAAGGCCGATTTGAAGCAAACACAGTATGTGCAACAGCTAACTAAGGAATTTGATGCCTTAAATGAGAGTCTCTCCCGCCCTGATCTACACTACAGGGAGAGGTTAGCACTGTCTGAAAAACAGTCTCAGATACAACACCAGCTGGCTTCTCTTACTGCATTGAGTTCGACTAGCAAGGGAACTTTGGAACCAGCTTATTTTGGAAATATGAGACGCACTGATGGAGATAAGCTTGAGCTAGCACCGCCTCCTATTGATGGGGAATGGCTACCAAAAAGTGCAGTCTATGCTCTTGTTGATCTTATGATGGTTGTGCTGAGCCGTCCAAAAGGAAATTTTAGGGATTGTGGAAAGCGCATTCAATCTGGAATGCATACCATTGAAGAGGAGCTTTTGAAGCTTGGAATAACCGATGGTGTGAGAGAAGTGAATTTGCAGCACTCTGCCATTTGGATGGCTGGTGTGTATTTAATGCTACTTATGCAGTTCCTTGAAAACAAAGTAGCCATGGAGTTGACACGATCTGAATTTGTAGAAGCACAAGAGGCGTTGGTGCAGATGAAGAATTGGTTTATACGCTTTCCAACTATTTTACAGACATGTGAGAGCATCATTGAAATGCTCAGGGGGCAGTATGCTCATTCCGTTGGTTGTTATAGTGAGGCAGCTTTTCATTTCATTGAAGCTGTAAAGCTCACAGAGAGCAAATCAATGCAAGCGCTTTGCCAAATATATGCTGCTGTCTCCTACATATGCATTGGTGACTCTGAATCATCTACACAGGCACTTGATTTGATTGGACCAGTTTACAGAATGATGGATTCATTTGTTGGAGTTCGAGAGAAAACCAATTGCCTTTTTGCCTATGGTCTTTTATTGATGAAGCAACAAGATCTACAGGAAGCAAGAAACCGACTTGCTAAAGGTTTGCAAATGACACATAATCAGCTTGGGAACCTTCAACTTGTTTCACAGTATTTGACAATCCTTGGGAGTTTGGCACTGGCGCTGCATGACGCTGGACAAGCAAGAGAGATTTTGAGATCATCCTTGACATTGGCAAAGAAGCTTTCTGATATCCCCACGCAGATATGGGTGCTCTCTGTTTTGACAGCTTTATATCAAGAATTAGGTGAGAAGGGAAGTGAAATGGAGAATGTTGAGTTTCAGAAGAGTAGGATGGATGCTCTGCAACAGAAACTTATAGATGCAAATTCGTCCATTCACCATATTGAACTAATTGACACAGTAAGGATTGAAGTCCAGCAATTTCATGAGGTTGACAGTCGTTCAACCCTTGGCCCAGCCATGAGCGCCAATCTTGACATTCCAGAATCTGTTGGCCTGTCTGCCCCAATGCCTGGTCAGTCGACATCAAGGCTAGTAGATATAGACATAGGAAACATAGGAAGACGTGGGAAGAGGAAAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000070 GO:0000278 GO:0000280 GO:0000785 GO:0000819 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007064 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016043 GO:0022402 GO:0022414 GO:0032116 GO:0032501 GO:0032502 GO:0032991 GO:0034086 GO:0034088 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0048285 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051276 GO:0061458 GO:0071840 GO:0097159 GO:0098813 GO:0140014 GO:1901363 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cohesin_load

Protein Analysis

723

Amino Acids

81.27

Weight (kDa)

5.96

Isoelectric Point (pI)

50.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cohesin_load	PF10345	22 - 626	1.7e-32	Cohesin loading factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007251)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51340
fragaria_vesca	FvH4_3g41130 FvH4_3g41130 FvH4_3g41130 FvH4_3g41130 FvH4_3g41130
malus_domestica	MD03G1047100.v1.1
prunus_persica	Prupe.6G038300_v2.0.a1 Prupe.6G038300_v2.0.a1 Prupe.6G038300_v2.0.a1 Prupe.6G038300_v2.0.a1
pyrus_communis	pycom03g03710
rosa_chinensis	RchiOBHm_Chr5g0073921
rosa_laevigata	RLG00000036425
rosa_multiflora	Rmu_co8214482.1_g000001 Rmu_sc0000470.1_g000018 Rmu_sc0038496.1_g000001
rosa_roxburghii	Rroxscaffold_1G00007450
rosa_rugosa	Rorug05G0427400 Rorug05G0427500
rosa_samantha	Rh5AG484400 Rh5BG505100 Rh5CG528900 Rh5DG517400
rosa_wichuraiana	Rw5G045030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2099
AccBSI	CCGCTC	1 cut(s)	54
AccI	GTMKAC	1 cut(s)	2108
AccII	CGCG	2 cut(s)	210, 212
AciI	CCGC	9 cut(s)	8, 14, 35, 54, 348, 354, 449, 814, 983
AcsI	RAATTY	5 cut(s)	785, 1072, 1168, 1265, 1951
AfaI	GTAC	1 cut(s)	534
AfeI	AGCGCT	1 cut(s)	1458
AfiI	CCNNNNNNNGG	4 cut(s)	193, 331, 995, 2099
AflIII	ACRYGT	2 cut(s)	105, 1337
AjiI	CACGTC	2 cut(s)	106, 2153
AjnI	CCWGG	4 cut(s)	42, 81, 336, 2098
Alw21I	GWGCWC	2 cut(s)	345, 1839
Alw26I	GTCTC	6 cut(s)	146, 423, 812, 867, 943, 1486
AlwNI	CAGNNNCTG	1 cut(s)	2075
Aor51HI	AGCGCT	1 cut(s)	1458
AoxI	GGCC	4 cut(s)	333, 741, 2038, 2080
ApeKI	GCWGC	9 cut(s)	400, 575, 578, 661, 731, 1174, 1403, 1475, 1747
ApoI	RAATTY	5 cut(s)	785, 1072, 1168, 1265, 1951
AspLEI	GCGC	8 cut(s)	210, 212, 214, 476, 1095, 1459, 1747, 2054
AspS9I	GGNCC	4 cut(s)	322, 334, 1538, 2039
AsuHPI	GGTGA	4 cut(s)	337, 1511, 1883, 1955
AsuNHI	GCTAGC	2 cut(s)	350, 976
AvaII	GGWCC	2 cut(s)	322, 1538
BanII	GRGCYC	1 cut(s)	345
BbsI	GAAGAC	1 cut(s)	2155
Bbv12I	GWGCWC	2 cut(s)	345, 1839
BbvI	GCAGC	9 cut(s)	412, 562, 565, 648, 718, 1186, 1415, 1462, 1734
BceAI	ACGGC	2 cut(s)	56, 1044
BcgI	CGANNNNNNTGC	2 cut(s)	885, 919
BciT130I	CCWGG	4 cut(s)	44, 83, 338, 2100
BcoDI	GTCTC	6 cut(s)	146, 423, 812, 867, 943, 1486
BfaI	CTAG	4 cut(s)	351, 909, 977, 2120
BfmI	CTRYAG	2 cut(s)	829, 1634
BfoI	RGCGCY	3 cut(s)	1460, 1748, 2055
BglI	GCCNNNNNGGC	1 cut(s)	740
BglII	AGATCT	1 cut(s)	1630
BlpI	GCTNAGC	2 cut(s)	275, 1055
Bme1390I	CCNGG	4 cut(s)	44, 83, 338, 2100
Bme18I	GGWCC	2 cut(s)	322, 1538
BmgBI	CACGTC	2 cut(s)	106, 2153
BmgT120I	GGNCC	4 cut(s)	322, 334, 1538, 2039
BmiI	GGNNCC	3 cut(s)	301, 927, 1694
BmrFI	CCNGG	4 cut(s)	44, 83, 338, 2100
BmrI	ACTGGG	1 cut(s)	556
BmsI	GCATC	5 cut(s)	718, 781, 1356, 1912, 1936
BmtI	GCTAGC	2 cut(s)	354, 980
BmuI	ACTGGG	1 cut(s)	556
BpiI	GAAGAC	1 cut(s)	2155
BplI	GAGNNNNNCTC	2 cut(s)	794, 826
BpmI	CTGGAG	1 cut(s)	359
Bpu10I	CCTNAGC	1 cut(s)	1361
Bpu1102I	GCTNAGC	2 cut(s)	275, 1055
BpuEI	CTTGAG	2 cut(s)	149, 992
BsaJI	CCNNGG	6 cut(s)	192, 336, 634, 1245, 1726, 2035
BsaXI	ACNNNNNCTCC	2 cut(s)	309, 339
Bsc4I	CCNNNNNNNGG	4 cut(s)	193, 331, 995, 2099
Bse1I	ACTGG	4 cut(s)	280, 551, 1541, 1746
BseBI	CCWGG	4 cut(s)	44, 83, 338, 2100
BseDI	CCNNGG	6 cut(s)	192, 336, 634, 1245, 1726, 2035
BseGI	GGATG	7 cut(s)	10, 559, 733, 1197, 1784, 1923, 1927
BseLI	CCNNNNNNNGG	4 cut(s)	193, 331, 995, 2099
BseMII	CTCAG	7 cut(s)	289, 326, 486, 494, 878, 1046, 1375
BseNI	ACTGG	4 cut(s)	280, 551, 1541, 1746
BsePI	GCGCGC	2 cut(s)	208, 210
BseRI	GAGGAG	4 cut(s)	152, 212, 300, 1139
BseXI	GCAGC	9 cut(s)	412, 562, 565, 648, 718, 1186, 1415, 1462, 1734
BseYI	CCCAGC	1 cut(s)	2041
BsgI	GTGCAG	4 cut(s)	277, 647, 1038, 1313
Bsh1236I	CGCG	2 cut(s)	210, 212
BshFI	GGCC	4 cut(s)	335, 743, 2040, 2082
BsiHKAI	GWGCWC	2 cut(s)	345, 1839
BslI	CCNNNNNNNGG	4 cut(s)	193, 331, 995, 2099
BsmAI	GTCTC	6 cut(s)	146, 423, 812, 867, 943, 1486
BsmBI	CGTCTC	2 cut(s)	146, 943
BsmI	GAATGC	4 cut(s)	415, 706, 1095, 1113
BsnI	GGCC	4 cut(s)	335, 743, 2040, 2082
Bsp1286I	GDGCHC	2 cut(s)	345, 1839
Bsp1407I	TGTACA	1 cut(s)	532
Bsp143I	GATC	6 cut(s)	60, 820, 1036, 1259, 1630, 1781
Bsp1720I	GCTNAGC	2 cut(s)	275, 1055
Bsp19I	CCATGG	1 cut(s)	1245
BspACI	CCGC	9 cut(s)	8, 14, 35, 54, 348, 354, 449, 814, 983
BspANI	GGCC	4 cut(s)	335, 743, 2040, 2082
BspCNI	CTCAG	7 cut(s)	288, 325, 487, 493, 877, 1047, 1374
BspFNI	CGCG	2 cut(s)	210, 212
BspHI	TCATGA	1 cut(s)	2011
BspLI	GGNNCC	3 cut(s)	301, 927, 1694
BspOI	GCTAGC	2 cut(s)	354, 980
BsrBI	CCGCTC	1 cut(s)	54
BsrGI	TGTACA	1 cut(s)	532
BsrI	ACTGG	4 cut(s)	280, 551, 1541, 1746
BssECI	CCNNGG	6 cut(s)	192, 336, 634, 1245, 1726, 2035
BssHII	GCGCGC	2 cut(s)	208, 210
BssMI	GATC	6 cut(s)	60, 820, 1036, 1259, 1630, 1781
BssT1I	CCWWGG	5 cut(s)	192, 634, 1245, 1726, 2035
Bst2UI	CCWGG	4 cut(s)	44, 83, 338, 2100
Bst4CI	ACNGT	7 cut(s)	269, 762, 849, 861, 1713, 1987, 2024
Bst6I	CTCTTC	4 cut(s)	162, 1116, 1904, 2153
BstAPI	GCANNNNNTGC	1 cut(s)	1025
BstAUI	TGTACA	1 cut(s)	532
BstC8I	GCNNGC	9 cut(s)	210, 212, 352, 405, 463, 573, 882, 978, 1455
BstDEI	CTNAG	8 cut(s)	275, 312, 480, 495, 780, 864, 1055, 1361
BstDSI	CCRYGG	1 cut(s)	1245
BstENI	CCTNNNNNAGG	1 cut(s)	329
BstF5I	GGATG	7 cut(s)	10, 559, 733, 1197, 1784, 1923, 1927
BstFNI	CGCG	2 cut(s)	210, 212
BstH2I	RGCGCY	3 cut(s)	1460, 1748, 2055
BstHHI	GCGC	8 cut(s)	210, 212, 214, 476, 1095, 1459, 1747, 2054
BstKTI	GATC	6 cut(s)	63, 823, 1039, 1262, 1633, 1784
BstMAI	GTCTC	6 cut(s)	146, 423, 812, 867, 943, 1486
BstMBI	GATC	6 cut(s)	60, 820, 1036, 1259, 1630, 1781
BstNI	CCWGG	4 cut(s)	44, 83, 338, 2100
BstNSI	RCATGY	1 cut(s)	1341
BstSCI	CCNGG	4 cut(s)	42, 81, 336, 2098
BstSFI	CTRYAG	2 cut(s)	829, 1634
BstUI	CGCG	2 cut(s)	210, 212
BstV1I	GCAGC	9 cut(s)	412, 562, 565, 648, 718, 1186, 1415, 1462, 1734
BstV2I	GAAGAC	1 cut(s)	2155
BstX2I	RGATCY	1 cut(s)	1630
BstXI	CCANNNNNNTGG	1 cut(s)	1192
BstYI	RGATCY	1 cut(s)	1630
BsuRI	GGCC	4 cut(s)	335, 743, 2040, 2082
BtgI	CCRYGG	1 cut(s)	1245
BtgZI	GCGATG	1 cut(s)	603
BtrI	CACGTC	2 cut(s)	106, 2153
BtsCI	GGATG	7 cut(s)	10, 559, 733, 1197, 1784, 1923, 1927
BtsI	GCAGTG	1 cut(s)	375
BtsIMutI	CAGTG	6 cut(s)	287, 375, 544, 845, 954, 1739
Cac8I	GCNNGC	9 cut(s)	210, 212, 352, 405, 463, 573, 882, 978, 1455
CaiI	CAGNNNCTG	1 cut(s)	2075
CciI	TCATGA	1 cut(s)	2011
CfoI	GCGC	8 cut(s)	210, 212, 214, 476, 1095, 1459, 1747, 2054
Cfr13I	GGNCC	4 cut(s)	322, 334, 1538, 2039
CseI	GACGC	3 cut(s)	467, 960, 1763
Csp6I	GTAC	1 cut(s)	533
CviAII	CATG	8 cut(s)	530, 541, 736, 1246, 1338, 1751, 2012, 2047
CviQI	GTAC	1 cut(s)	533
DdeI	CTNAG	8 cut(s)	275, 312, 480, 495, 780, 864, 1055, 1361
DpnI	GATC	6 cut(s)	62, 822, 1038, 1261, 1632, 1783
DpnII	GATC	6 cut(s)	60, 820, 1036, 1259, 1630, 1781
Eam1104I	CTCTTC	4 cut(s)	162, 1116, 1904, 2153
EarI	CTCTTC	4 cut(s)	162, 1116, 1904, 2153
EciI	GGCGGA	2 cut(s)	29, 50
Ecl136II	GAGCTC	1 cut(s)	343
Eco130I	CCWWGG	5 cut(s)	192, 634, 1245, 1726, 2035
Eco24I	GRGCYC	1 cut(s)	345
Eco32I	GATATC	1 cut(s)	1816
Eco47I	GGWCC	2 cut(s)	322, 1538
Eco47III	AGCGCT	1 cut(s)	1458
Eco53kI	GAGCTC	1 cut(s)	343
EcoICRI	GAGCTC	1 cut(s)	343
EcoNI	CCTNNNNNAGG	1 cut(s)	329
EcoO109I	RGGNCCY	2 cut(s)	322, 334
EcoRII	CCWGG	4 cut(s)	42, 81, 336, 2098
EcoRV	GATATC	1 cut(s)	1816
EcoT14I	CCWWGG	5 cut(s)	192, 634, 1245, 1726, 2035
EcoT22I	ATGCAT	2 cut(s)	1113, 1496
EcoT38I	GRGCYC	1 cut(s)	345
ErhI	CCWWGG	5 cut(s)	192, 634, 1245, 1726, 2035
Esp3I	CGTCTC	2 cut(s)	146, 943
FaeI	CATG	8 cut(s)	533, 544, 739, 1249, 1341, 1754, 2015, 2050
FalI	AAGNNNNNCTT	4 cut(s)	185, 217, 1113, 1145
FatI	CATG	8 cut(s)	529, 540, 735, 1245, 1337, 1750, 2011, 2046
FauI	CCCGC	1 cut(s)	821
FauNDI	CATATG	1 cut(s)	1490
FblI	GTMKAC	1 cut(s)	2108
FokI	GGATG	7 cut(s)	17, 566, 740, 1204, 1771, 1930, 1934
FriOI	GRGCYC	1 cut(s)	345
FspBI	CTAG	4 cut(s)	351, 909, 977, 2120
GlaI	GCGC	8 cut(s)	209, 211, 213, 475, 1094, 1458, 1746, 2053
GsaI	CCCAGC	1 cut(s)	2045
GsuI	CTGGAG	1 cut(s)	359
HaeII	RGCGCY	3 cut(s)	1460, 1748, 2055
HaeIII	GGCC	4 cut(s)	335, 743, 2040, 2082
HgaI	GACGC	3 cut(s)	467, 960, 1763
HhaI	GCGC	8 cut(s)	210, 212, 214, 476, 1095, 1459, 1747, 2054
Hin1II	CATG	8 cut(s)	533, 544, 739, 1249, 1341, 1754, 2015, 2050
Hin6I	GCGC	8 cut(s)	208, 210, 212, 474, 1093, 1457, 1745, 2052
HinP1I	GCGC	8 cut(s)	208, 210, 212, 474, 1093, 1457, 1745, 2052
HincII	GTYRAC	4 cut(s)	184, 1254, 2020, 2109
HindII	GTYRAC	4 cut(s)	184, 1254, 2020, 2109
HindIII	AAGCTT	3 cut(s)	968, 1136, 1805
HinfI	GANTC	6 cut(s)	147, 805, 1502, 1508, 1559, 2072
HphI	GGTGA	4 cut(s)	337, 1511, 1883, 1955
Hpy166II	GTNNAC	5 cut(s)	184, 1254, 1546, 2020, 2109
Hpy188III	TCNNGA	8 cut(s)	133, 494, 1104, 1577, 1862, 2012, 2060, 2069
Hpy8I	GTNNAC	5 cut(s)	184, 1254, 1546, 2020, 2109
Hpy99I	CGWCG	3 cut(s)	107, 128, 299
HpyAV	CCTTC	5 cut(s)	11, 246, 733, 1706, 1870
HpyCH4III	ACNGT	7 cut(s)	269, 762, 849, 861, 1713, 1987, 2024
HpyCH4IV	ACGT	3 cut(s)	105, 180, 2152
HpyF3I	CTNAG	8 cut(s)	275, 312, 480, 495, 780, 864, 1055, 1361
HpySE526I	ACGT	3 cut(s)	105, 180, 2152
Hsp92II	CATG	8 cut(s)	533, 544, 739, 1249, 1341, 1754, 2015, 2050
HspAI	GCGC	8 cut(s)	208, 210, 212, 474, 1093, 1457, 1745, 2052
Kzo9I	GATC	6 cut(s)	60, 820, 1036, 1259, 1630, 1781
LmnI	GCTCC	8 cut(s)	46, 205, 225, 305, 313, 340, 531, 1126
Lsp1109I	GCAGC	9 cut(s)	412, 562, 565, 648, 718, 1186, 1415, 1462, 1734
LweI	GCATC	5 cut(s)	718, 781, 1356, 1912, 1936
MaeI	CTAG	4 cut(s)	351, 909, 977, 2120
MaeII	ACGT	3 cut(s)	105, 180, 2152
MaeIII	GTNAC	3 cut(s)	284, 689, 1499
MalI	GATC	6 cut(s)	62, 822, 1038, 1261, 1632, 1783
MbiI	CCGCTC	1 cut(s)	54
MboI	GATC	6 cut(s)	60, 820, 1036, 1259, 1630, 1781
MboII	GAAGA	7 cut(s)	149, 637, 1133, 1312, 1921, 2160, 2170
MfeI	CAATTG	1 cut(s)	1588
MflI	RGATCY	1 cut(s)	1630
MhlI	GDGCHC	2 cut(s)	345, 1839
MlyI	GAGTC	2 cut(s)	814, 1496
MmeI	TCCRAC	2 cut(s)	1346, 1549
Mph1103I	ATGCAT	2 cut(s)	1113, 1496
MseI	TTAA	2 cut(s)	797, 1208
MslI	CAYNNNNRTG	2 cut(s)	1190, 1355
MspA1I	CMGCKG	2 cut(s)	403, 880
MspR9I	CCNGG	4 cut(s)	44, 83, 338, 2100
MunI	CAATTG	1 cut(s)	1588
Mva1269I	GAATGC	4 cut(s)	415, 706, 1095, 1113
MvaI	CCWGG	4 cut(s)	44, 83, 338, 2100
MvnI	CGCG	2 cut(s)	210, 212
NcoI	CCATGG	1 cut(s)	1245
NdeI	CATATG	1 cut(s)	1490
NdeII	GATC	6 cut(s)	60, 820, 1036, 1259, 1630, 1781
NheI	GCTAGC	2 cut(s)	350, 976
NlaIII	CATG	8 cut(s)	533, 544, 739, 1249, 1341, 1754, 2015, 2050
NlaIV	GGNNCC	3 cut(s)	301, 927, 1694
NmuCI	GTSAC	2 cut(s)	689, 1499
NsiI	ATGCAT	2 cut(s)	1113, 1496
NspI	RCATGY	1 cut(s)	1341
PagI	TCATGA	1 cut(s)	2011
PauI	GCGCGC	2 cut(s)	208, 210
PciI	ACATGT	1 cut(s)	1337
PcsI	WCGNNNNNNNCGW	2 cut(s)	69, 404
PctI	GAATGC	4 cut(s)	415, 706, 1095, 1113
PfeI	GAWTC	4 cut(s)	147, 1508, 1559, 2072
PflMI	CCANNNNNTGG	1 cut(s)	2099
PleI	GAGTC	2 cut(s)	813, 1496
PpsI	GAGTC	2 cut(s)	813, 1496
PpuMI	RGGWCCY	1 cut(s)	322
PscI	ACATGT	1 cut(s)	1337
Psp124BI	GAGCTC	1 cut(s)	345
Psp5II	RGGWCCY	1 cut(s)	322
Psp6I	CCWGG	4 cut(s)	42, 81, 336, 2098
PspFI	CCCAGC	1 cut(s)	2041
PspGI	CCWGG	4 cut(s)	42, 81, 336, 2098
PspN4I	GGNNCC	3 cut(s)	301, 927, 1694
PspPI	GGNCC	4 cut(s)	322, 334, 1538, 2039
PspPPI	RGGWCCY	1 cut(s)	322
PstNI	CAGNNNCTG	1 cut(s)	2075
PsuI	RGATCY	1 cut(s)	1630
PteI	GCGCGC	2 cut(s)	208, 210
PvuII	CAGCTG	2 cut(s)	403, 880
RsaI	GTAC	1 cut(s)	534
RsaNI	GTAC	1 cut(s)	533
RseI	CAYNNNNRTG	2 cut(s)	1190, 1355
SacI	GAGCTC	1 cut(s)	345
SalI	GTCGAC	1 cut(s)	2107
SaqAI	TTAA	2 cut(s)	797, 1208
Sau3AI	GATC	6 cut(s)	60, 820, 1036, 1259, 1630, 1781
Sau96I	GGNCC	4 cut(s)	322, 334, 1538, 2039
SchI	GAGTC	2 cut(s)	814, 1496
ScrFI	CCNGG	4 cut(s)	44, 83, 338, 2100
SduI	GDGCHC	2 cut(s)	345, 1839
SfaNI	GCATC	5 cut(s)	718, 781, 1356, 1912, 1936
SfcI	CTRYAG	2 cut(s)	829, 1634
SinI	GGWCC	2 cut(s)	322, 1538
SmiMI	CAYNNNNRTG	2 cut(s)	1190, 1355
SmlI	CTYRAG	2 cut(s)	164, 971
SmoI	CTYRAG	2 cut(s)	164, 971
SsiI	CCGC	9 cut(s)	8, 14, 35, 54, 348, 354, 449, 814, 983
SspMI	CTAG	4 cut(s)	351, 909, 977, 2120
SstI	GAGCTC	1 cut(s)	345
StyD4I	CCNGG	4 cut(s)	42, 81, 336, 2098
StyI	CCWWGG	5 cut(s)	192, 634, 1245, 1726, 2035
TaaI	ACNGT	7 cut(s)	269, 762, 849, 861, 1713, 1987, 2024
TaiI	ACGT	3 cut(s)	108, 183, 2155
TaqI	TCGA	5 cut(s)	126, 443, 905, 1576, 2108
TatI	WGTACW	1 cut(s)	532
TauI	GCSGC	3 cut(s)	57, 357, 452
TfiI	GAWTC	4 cut(s)	147, 1508, 1559, 2072
Tru1I	TTAA	2 cut(s)	797, 1208
Tru9I	TTAA	2 cut(s)	797, 1208
TscAI	CASTG	6 cut(s)	287, 375, 551, 852, 961, 1746
TseFI	GTSAC	2 cut(s)	689, 1499
TseI	GCWGC	9 cut(s)	400, 575, 578, 661, 731, 1174, 1403, 1475, 1747
Tsp45I	GTSAC	2 cut(s)	689, 1499
TspDTI	ATGAA	8 cut(s)	669, 752, 1313, 1400, 1405, 1551, 1634, 2000
TspGWI	ACGGA	1 cut(s)	1372
TspRI	CASTG	6 cut(s)	287, 375, 551, 852, 961, 1746
Van91I	CCANNNNNTGG	1 cut(s)	2099
VpaK11BI	GGWCC	2 cut(s)	322, 1538
XagI	CCTNNNNNAGG	1 cut(s)	329
XapI	RAATTY	5 cut(s)	785, 1072, 1168, 1265, 1951
XceI	RCATGY	1 cut(s)	1341
XcmI	CCANNNNNNNNNTGG	1 cut(s)	199
XmiI	GTMKAC	1 cut(s)	2108
XspI	CTAG	4 cut(s)	351, 909, 977, 2120
Zsp2I	ATGCAT	2 cut(s)	1113, 1496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.