At4g28440-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0442351 RchiOBHm_Chr7g0219251 |
| rosa_laevigata | RLG00000006016 |
| rosa_multiflora | Rmu_co8418355.1_g000001 Rmu_sc0000124.1_g000049 |
| rosa_roxburghii | Rroxscaffold_5G00383220 |
| rosa_rugosa | Rorug04G0340500 |
| rosa_samantha | Rh4AG392200 Rh4BG405700 Rh4CG420800 Rh4DG398900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 64 |
| AccI | GTMKAC | 2 cut(s) | 237, 579 |
| AciI | CCGC | 1 cut(s) | 367 |
| AcoI | YGGCCR | 1 cut(s) | 270 |
| AcsI | RAATTY | 1 cut(s) | 656 |
| AcuI | CTGAAG | 2 cut(s) | 118, 460 |
| AcyI | GRCGYC | 1 cut(s) | 61 |
| AfaI | GTAC | 2 cut(s) | 37, 412 |
| AflIII | ACRYGT | 4 cut(s) | 207, 375, 549, 664 |
| AgsI | TTSAA | 9 cut(s) | 214, 222, 314, 359, 431, 564, 599, 656, 662 |
| AjnI | CCWGG | 1 cut(s) | 64 |
| AluBI | AGCT | 3 cut(s) | 140, 364, 482 |
| AluI | AGCT | 3 cut(s) | 140, 364, 482 |
| AoxI | GGCC | 2 cut(s) | 70, 270 |
| ApoI | RAATTY | 1 cut(s) | 656 |
| AspS9I | GGNCC | 1 cut(s) | 71 |
| BbsI | GAAGAC | 1 cut(s) | 466 |
| BciT130I | CCWGG | 1 cut(s) | 66 |
| BfaI | CTAG | 1 cut(s) | 257 |
| BlpI | GCTNAGC | 2 cut(s) | 264, 606 |
| BmcAI | AGTACT | 2 cut(s) | 37, 412 |
| Bme1390I | CCNGG | 1 cut(s) | 66 |
| BmgT120I | GGNCC | 1 cut(s) | 71 |
| BmrFI | CCNGG | 1 cut(s) | 66 |
| BmsI | GCATC | 1 cut(s) | 326 |
| BpiI | GAAGAC | 1 cut(s) | 466 |
| BpmI | CTGGAG | 1 cut(s) | 141 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 264, 606 |
| Bsa29I | ATCGAT | 1 cut(s) | 320 |
| BsaHI | GRCGYC | 1 cut(s) | 61 |
| Bse118I | RCCGGY | 2 cut(s) | 268, 614 |
| Bse1I | ACTGG | 3 cut(s) | 124, 273, 466 |
| BseBI | CCWGG | 1 cut(s) | 66 |
| BseCI | ATCGAT | 1 cut(s) | 320 |
| BseGI | GGATG | 2 cut(s) | 13, 388 |
| BseMII | CTCAG | 3 cut(s) | 255, 429, 597 |
| BseNI | ACTGG | 3 cut(s) | 124, 273, 466 |
| BshFI | GGCC | 2 cut(s) | 72, 272 |
| BshVI | ATCGAT | 1 cut(s) | 320 |
| BsiSI | CCGG | 2 cut(s) | 269, 615 |
| BslFI | GGGAC | 1 cut(s) | 72 |
| BsmFI | GGGAC | 1 cut(s) | 72 |
| BsnI | GGCC | 2 cut(s) | 72, 272 |
| Bsp143I | GATC | 2 cut(s) | 148, 490 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 264, 606 |
| BspACI | CCGC | 1 cut(s) | 367 |
| BspANI | GGCC | 2 cut(s) | 72, 272 |
| BspCNI | CTCAG | 3 cut(s) | 256, 430, 598 |
| BspDI | ATCGAT | 1 cut(s) | 320 |
| BsrFI | RCCGGY | 2 cut(s) | 268, 614 |
| BsrI | ACTGG | 3 cut(s) | 124, 273, 466 |
| BssAI | RCCGGY | 2 cut(s) | 268, 614 |
| BssMI | GATC | 2 cut(s) | 148, 490 |
| BssNI | GRCGYC | 1 cut(s) | 61 |
| Bst2UI | CCWGG | 1 cut(s) | 66 |
| Bst4CI | ACNGT | 6 cut(s) | 22, 181, 283, 397, 523, 625 |
| BstACI | GRCGYC | 1 cut(s) | 61 |
| BstC8I | GCNNGC | 2 cut(s) | 270, 612 |
| BstDEI | CTNAG | 4 cut(s) | 264, 414, 438, 606 |
| BstF5I | GGATG | 2 cut(s) | 13, 388 |
| BstKTI | GATC | 2 cut(s) | 151, 493 |
| BstMBI | GATC | 2 cut(s) | 148, 490 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 78, 108, 269, 450, 611 |
| BstNI | CCWGG | 1 cut(s) | 66 |
| BstNSI | RCATGY | 4 cut(s) | 88, 211, 379, 553 |
| BstSCI | CCNGG | 1 cut(s) | 64 |
| BstV2I | GAAGAC | 1 cut(s) | 466 |
| Bsu15I | ATCGAT | 1 cut(s) | 320 |
| BsuRI | GGCC | 2 cut(s) | 72, 272 |
| BsuTUI | ATCGAT | 1 cut(s) | 320 |
| BtgZI | GCGATG | 2 cut(s) | 126, 468 |
| BtsCI | GGATG | 2 cut(s) | 13, 388 |
| BtsI | GCAGTG | 2 cut(s) | 256, 598 |
| BtsIMutI | CAGTG | 4 cut(s) | 18, 256, 393, 598 |
| Cac8I | GCNNGC | 2 cut(s) | 270, 612 |
| Cfr10I | RCCGGY | 2 cut(s) | 268, 614 |
| Cfr13I | GGNCC | 1 cut(s) | 71 |
| ClaI | ATCGAT | 1 cut(s) | 320 |
| Csp6I | GTAC | 2 cut(s) | 36, 411 |
| CviAII | CATG | 4 cut(s) | 85, 208, 376, 550 |
| CviQI | GTAC | 2 cut(s) | 36, 411 |
| DdeI | CTNAG | 4 cut(s) | 264, 414, 438, 606 |
| DpnI | GATC | 2 cut(s) | 150, 492 |
| DpnII | GATC | 2 cut(s) | 148, 490 |
| EaeI | YGGCCR | 1 cut(s) | 270 |
| EciI | GGCGGA | 1 cut(s) | 356 |
| Eco57I | CTGAAG | 2 cut(s) | 118, 460 |
| EcoRII | CCWGG | 1 cut(s) | 64 |
| FaeI | CATG | 4 cut(s) | 88, 211, 379, 553 |
| FaiI | YATR | 7 cut(s) | 86, 209, 350, 377, 551, 680, 682 |
| FaqI | GGGAC | 1 cut(s) | 72 |
| FatI | CATG | 4 cut(s) | 84, 207, 375, 549 |
| FblI | GTMKAC | 2 cut(s) | 237, 579 |
| FokI | GGATG | 2 cut(s) | 20, 395 |
| FspBI | CTAG | 1 cut(s) | 257 |
| GsuI | CTGGAG | 1 cut(s) | 141 |
| HaeIII | GGCC | 2 cut(s) | 72, 272 |
| HapII | CCGG | 2 cut(s) | 269, 615 |
| Hin1I | GRCGYC | 1 cut(s) | 61 |
| Hin1II | CATG | 4 cut(s) | 88, 211, 379, 553 |
| HincII | GTYRAC | 5 cut(s) | 205, 238, 334, 547, 580 |
| HindII | GTYRAC | 5 cut(s) | 205, 238, 334, 547, 580 |
| HinfI | GANTC | 2 cut(s) | 218, 560 |
| HpaII | CCGG | 2 cut(s) | 269, 615 |
| Hpy166II | GTNNAC | 7 cut(s) | 157, 205, 238, 334, 499, 547, 580 |
| Hpy188I | TCNGA | 6 cut(s) | 7, 54, 137, 382, 479, 556 |
| Hpy8I | GTNNAC | 7 cut(s) | 157, 205, 238, 334, 499, 547, 580 |
| Hpy99I | CGWCG | 1 cut(s) | 584 |
| HpyAV | CCTTC | 3 cut(s) | 49, 280, 622 |
| HpyCH4III | ACNGT | 6 cut(s) | 22, 181, 283, 397, 523, 625 |
| HpyCH4IV | ACGT | 2 cut(s) | 61, 664 |
| HpyCH4V | TGCA | 3 cut(s) | 88, 190, 532 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 78, 108, 269, 450, 611 |
| HpyF3I | CTNAG | 4 cut(s) | 264, 414, 438, 606 |
| HpySE526I | ACGT | 2 cut(s) | 61, 664 |
| Hsp92I | GRCGYC | 1 cut(s) | 61 |
| Hsp92II | CATG | 4 cut(s) | 88, 211, 379, 553 |
| KroI | GCCGGC | 1 cut(s) | 268 |
| KroNI | GCCGGC | 1 cut(s) | 270 |
| Kzo9I | GATC | 2 cut(s) | 148, 490 |
| LmnI | GCTCC | 1 cut(s) | 369 |
| LpnPI | CCDG | 9 cut(s) | 51, 78, 105, 282, 286, 384, 447, 624, 628 |
| LweI | GCATC | 1 cut(s) | 326 |
| MaeI | CTAG | 1 cut(s) | 257 |
| MaeII | ACGT | 2 cut(s) | 61, 664 |
| MaeIII | GTNAC | 4 cut(s) | 10, 181, 385, 523 |
| MalI | GATC | 2 cut(s) | 150, 492 |
| MboI | GATC | 2 cut(s) | 148, 490 |
| MboII | GAAGA | 5 cut(s) | 124, 302, 466, 569, 644 |
| MluCI | AATT | 3 cut(s) | 89, 431, 656 |
| MmeI | TCCRAC | 2 cut(s) | 32, 360 |
| MnlI | CCTC | 6 cut(s) | 84, 219, 311, 505, 561, 653 |
| MroNI | GCCGGC | 1 cut(s) | 268 |
| MspI | CCGG | 2 cut(s) | 269, 615 |
| MspR9I | CCNGG | 1 cut(s) | 66 |
| MvaI | CCWGG | 1 cut(s) | 66 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 78, 108, 269, 450, 611 |
| NaeI | GCCGGC | 1 cut(s) | 270 |
| NdeII | GATC | 2 cut(s) | 148, 490 |
| NgoMIV | GCCGGC | 1 cut(s) | 268 |
| NlaIII | CATG | 4 cut(s) | 88, 211, 379, 553 |
| NmuCI | GTSAC | 2 cut(s) | 10, 385 |
| NspI | RCATGY | 4 cut(s) | 88, 211, 379, 553 |
| PciI | ACATGT | 3 cut(s) | 207, 375, 549 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 58 |
| PdiI | GCCGGC | 1 cut(s) | 270 |
| PfeI | GAWTC | 2 cut(s) | 218, 560 |
| PscI | ACATGT | 3 cut(s) | 207, 375, 549 |
| Psp6I | CCWGG | 1 cut(s) | 64 |
| PspGI | CCWGG | 1 cut(s) | 64 |
| PspPI | GGNCC | 1 cut(s) | 71 |
| RsaI | GTAC | 2 cut(s) | 37, 412 |
| RsaNI | GTAC | 2 cut(s) | 36, 411 |
| SalI | GTCGAC | 2 cut(s) | 236, 578 |
| Sau3AI | GATC | 2 cut(s) | 148, 490 |
| Sau96I | GGNCC | 1 cut(s) | 71 |
| ScaI | AGTACT | 2 cut(s) | 37, 412 |
| ScrFI | CCNGG | 1 cut(s) | 66 |
| SfaNI | GCATC | 1 cut(s) | 326 |
| Sse9I | AATT | 3 cut(s) | 89, 431, 656 |
| SsiI | CCGC | 1 cut(s) | 367 |
| SspMI | CTAG | 1 cut(s) | 257 |
| StyD4I | CCNGG | 1 cut(s) | 64 |
| TaaI | ACNGT | 6 cut(s) | 22, 181, 283, 397, 523, 625 |
| TaiI | ACGT | 2 cut(s) | 64, 667 |
| TaqI | TCGA | 6 cut(s) | 76, 237, 320, 579, 669, 675 |
| TasI | AATT | 3 cut(s) | 89, 431, 656 |
| TatI | WGTACW | 2 cut(s) | 35, 410 |
| TfiI | GAWTC | 2 cut(s) | 218, 560 |
| TscAI | CASTG | 4 cut(s) | 25, 256, 400, 598 |
| TseFI | GTSAC | 2 cut(s) | 10, 385 |
| Tsp45I | GTSAC | 2 cut(s) | 10, 385 |
| TspDTI | ATGAA | 4 cut(s) | 129, 179, 471, 521 |
| TspRI | CASTG | 4 cut(s) | 25, 256, 400, 598 |
| XapI | RAATTY | 1 cut(s) | 656 |
| XceI | RCATGY | 4 cut(s) | 88, 211, 379, 553 |
| XmiI | GTMKAC | 2 cut(s) | 237, 579 |
| XspI | CTAG | 1 cut(s) | 257 |
| ZraI | GACGTC | 1 cut(s) | 62 |
| ZrmI | AGTACT | 2 cut(s) | 37, 412 |