RchiOBHm_Chr2g0089541

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0017553
Physical Location & Seq
Reverse (-)
3712834 .. 3714744
1911 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1911 bp
ATGCTAAACAAAGCATCATGCATCCAACTCATCCAGAGCTGCAAATCCATGAAGCAGCTCAAACAGATCCAAACCCAGATGTTCCTTCTTGGACTACACCAATGCAGAGCCACCCTTAGCAAGCTCATGGTCTTCTGCACAGACCCAACTCTTGGAGACTTGCATTACGCCGAGAAAATCTTCGATCACATCCAAACCCCTGGTTTGTTCATCTACAATGTAATGATCAAGGCTTTAGCCAAAAGGAGAAGATTCAAAAGCGTCATTGAGCTCTTTCGGCGGTTGAGGGAAGAGGGCTTGTGGCCCGATAATTTCACGTACCCATTTGCTTGTAAAGCCATTGGAGGCTTGGGAGAGGCTCAGGAAGGTGCGAAGGTTCATGGGTTTGCTGTAAAGACTGGACTTCAGTTCGATTCGTATGTGTGTAACTCACTCATTGACATGTATGCGGAATTGGGTCTAGTTGATAATGTGAAGCAGGTGTTTGATGAGATGCCTGAGAGAGATGTTGTTTCTTGGAATGTTACGATTTCAGGGTGTGTTAGGTGTATGGGGTTTAGGGAGGCAGTGAGTGTGTTCCGTCGGATGAGAAAAGAGAGCAATGAGAAGCCGGATGAAGCTACAGTTGTGAGCACGCTTTCGGCTTGCGCAGCACTGAAAGATGTGGAGCTTGGTAGAGAAATTCATGACTATGTTAGAGCTGAGCTTAAGTTCACTAGTATAATCGGAAATGCGGTGTTGGATATGTATGCTAAGTGTGGTTGTTTGAGTGAAGCAAGGAAAGTTTTCGATGAAATTCCGTTGAAAAATGTCATGTGTTGGACTAGTATGGTGTGTGGGTATGTGAATTGTGGTATGCTGGATGAGGCTAGAGAGCTGTTTGATAGGAGTCCTACTAAGGATGTTGTTCTATGGACGGCTATGATGAATGGGTATGTACAGTATAACCAATTTGATGAGGCAGTGGCTCTATTCCAAGAGATGCAATTTAGAAGAGTTCAAGTGGATAAATTCACAGTTGTTGCGCTCCTCACTGGCTGTGCTCAGCTAGGAGCATTAGAGCAAGGGAATTGGATTCACGGATACATAGATGAAAATGGAATCAAAATTGATGCTGTTGTTGGTACTGCTCTTATAGAAATGTATGCAAAATGTGGGTGCATAGACAAGTCTCTGGAGATTTTCAATGCATTGAATGAAAAAGATGCAGCCACTTGGACTTCAATGGTCTGCGCGCTTGCAATGAATGGAAAGACAAGCAAAGCACTCGAGTTGTTCTCCAAAATGAAGCAGGTTAAGATCAACCCTGATGATATCACCTTCATTGGTGTCTTGAGTGCTTGTAGTCATGGAGGATTGGTTGATGAAGGACGAAAGTTGTTCAACTCCATGAGAAAGGACTATGGGATCGAGCCAAAGCTAGAACATTACGGGTGTCTGATTGACCTTCTTGGTCGGGCTGGACTCCTAGACGAGGCAGAGGAGCTGATAGAAAGTATTCCCAGTGAAAACAATAAGTTTGTAGTTCCACTTTACAGTTCTTTACTCAGTGCTTGCAGAATCCATGGCAATGTTAGCATGAGTGAAAGAGTGGCTAAAAGGATATCGGATATTGAGTCCAGCGGCTCGAGTGCTCACACGCTTCTGGCCAACATCTACGCAGATGCTGAGAGATGGGAAGATGTAACAAAGGTGAGGAGGAAAATGAGAGATCTCGGAGTGAAAAAGATGCCTGGGTGCAGCTCGGTTGAGATTAATGGCACTGTCCATGAGTTCCTTGTTGGTGATTCATCTCACCCAGAAACGGAAAAGATATACTCTATGTTGCATAGATTGATAAAGCCATCAGTGGATTTAGAAGAAAATTACGGAATAGAAACAGAAATCTCAGGTTTAGTAAGTTTCTGTTGA

Protein Analysis

636

Amino Acids

71.25

Weight (kDa)

5.83

Isoelectric Point (pI)

42.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 67 - 107 6.4e-07 PPR repeat family
PPR_2 PF13041 168 - 217 1.8e-06 PPR repeat family
PPR_2 PF13041 300 - 348 3.5e-12 PPR repeat family
PPR PF01535 303 - 331 2e-06 PPR repeat
PPR_2 PF13041 402 - 449 2.8e-09 PPR repeat family
PPR PF01535 405 - 431 2.8e-06 PPR repeat
E_motif PF20431 522 - 584 1.5e-17 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31430 AT1G31430
fragaria_vesca FvH4_1g04051
malus_domestica MD04G1011600.v1.1
prunus_persica Prupe.7G236400_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0089541
rosa_laevigata RLG00000016038
rosa_multiflora Rmu_sc0006193.1_g000007
rosa_rugosa Rorug02G0001500
rosa_samantha Rh2BG045500 Rh2BG045600 Rh2DG046800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 469
Acc16I TGCGCA 1 cut(s) 649
Acc36I ACCTGC 2 cut(s) 469, 1282
AccB7I CCANNNNNTGG 1 cut(s) 152
AccII CGCG 1 cut(s) 1235
AciI CCGC 4 cut(s) 280, 449, 734, 1623
AclWI GGATC 2 cut(s) 61, 1415
AcoI YGGCCR 1 cut(s) 1647
AcsI RAATTY 3 cut(s) 681, 795, 1010
AcuI CTGAAG 1 cut(s) 389
AfaI GTAC 3 cut(s) 320, 939, 1126
AfiI CCNNNNNNNGG 3 cut(s) 152, 1474, 1804
AflII CTTAAG 1 cut(s) 707
AflIII ACRYGT 1 cut(s) 441
AgsI TTSAA 7 cut(s) 256, 805, 1001, 1186, 1195, 1224, 1384
AhlI ACTAGT 2 cut(s) 716, 824
AjnI CCWGG 2 cut(s) 199, 1732
Alw21I GWGCWC 4 cut(s) 273, 635, 1045, 1636
Alw26I GTCTC 2 cut(s) 150, 1176
AlwI GGATC 2 cut(s) 61, 1415
AlwNI CAGNNNCTG 1 cut(s) 1667
Ama87I CYCGRG 2 cut(s) 1268, 1627
AoxI GGCC 2 cut(s) 302, 1647
ApeKI GCWGC 5 cut(s) 39, 55, 650, 1208, 1740
ApoI RAATTY 3 cut(s) 681, 795, 1010
AseI ATTAAT 1 cut(s) 1755
Asp700I GAANNNNTTC 3 cut(s) 179, 785, 1497
AspLEI GCGC 4 cut(s) 650, 1027, 1235, 1237
AspS9I GGNCC 1 cut(s) 303
AsuHPI GGTGA 4 cut(s) 1309, 1705, 1787, 1796
AvaI CYCGRG 2 cut(s) 1268, 1627
BalI TGGCCA 1 cut(s) 1649
BanII GRGCYC 1 cut(s) 273
BbsI GAAGAC 1 cut(s) 124
Bbv12I GWGCWC 4 cut(s) 273, 635, 1045, 1636
BbvI GCAGC 5 cut(s) 26, 67, 662, 1220, 1752
BccI CCATC 2 cut(s) 1668, 1852
BceAI ACGGC 1 cut(s) 933
BcgI CGANNNNNNTGC 2 cut(s) 1249, 1283
BciT130I CCWGG 2 cut(s) 201, 1734
BciVI GTATCC 1 cut(s) 1076
BclI TGATCA 1 cut(s) 225
BcoDI GTCTC 2 cut(s) 150, 1176
BcuI ACTAGT 2 cut(s) 716, 824
BfaI CTAG 7 cut(s) 461, 717, 825, 870, 1049, 1421, 1469
BfmI CTRYAG 1 cut(s) 621
BfrI CTTAAG 1 cut(s) 707
BfuAI ACCTGC 2 cut(s) 469, 1282
BfuI GTATCC 1 cut(s) 1076
BglII AGATCT 1 cut(s) 1711
BisI GCNGC 6 cut(s) 40, 56, 651, 1209, 1624, 1741
BlpI GCTNAGC 2 cut(s) 702, 1044
BlsI GCNGC 6 cut(s) 41, 57, 652, 1210, 1625, 1742
Bme1390I CCNGG 2 cut(s) 201, 1734
BmeT110I CYCGRG 2 cut(s) 1268, 1627
BmgT120I GGNCC 1 cut(s) 303
BmrFI CCNGG 2 cut(s) 201, 1734
BmrI ACTGGG 1 cut(s) 1497
BmsI GCATC 8 cut(s) 23, 30, 483, 972, 1102, 1195, 1654, 1719
BmuI ACTGGG 1 cut(s) 1497
BpiI GAAGAC 1 cut(s) 124
BplI GAGNNNNNCTC 2 cut(s) 1262, 1294
BpmI CTGGAG 1 cut(s) 1196
Bpu10I CCTNAGC 2 cut(s) 116, 360
Bpu1102I GCTNAGC 2 cut(s) 702, 1044
BpuEI CTTGAG 1 cut(s) 1354
BsaAI YACGTR 1 cut(s) 318
BsaJI CCNNGG 3 cut(s) 199, 1564, 1733
BsaXI ACNNNNNCTCC 2 cut(s) 1344, 1374
Bsc4I CCNNNNNNNGG 3 cut(s) 152, 1474, 1804
Bse1I ACTGG 3 cut(s) 403, 1039, 1503
Bse3DI GCAATG 3 cut(s) 607, 1248, 1576
BseBI CCWGG 2 cut(s) 201, 1734
BseDI CCNNGG 3 cut(s) 199, 1564, 1733
BseGI GGATG 7 cut(s) 21, 30, 189, 591, 619, 868, 907
BseLI CCNNNNNNNGG 3 cut(s) 152, 1474, 1804
BseMI GCAATG 3 cut(s) 607, 1248, 1576
BseMII CTCAG 7 cut(s) 374, 489, 693, 1058, 1561, 1659, 1902
BseNI ACTGG 3 cut(s) 403, 1039, 1503
BsePI GCGCGC 1 cut(s) 1233
BseRI GAGGAG 3 cut(s) 1019, 1496, 1711
BseXI GCAGC 5 cut(s) 26, 67, 662, 1220, 1752
BsgI GTGCAG 2 cut(s) 121, 1759
Bsh1236I CGCG 1 cut(s) 1235
BshFI GGCC 2 cut(s) 304, 1649
BsiHKAI GWGCWC 4 cut(s) 273, 635, 1045, 1636
BsiHKCI CYCGRG 2 cut(s) 1268, 1627
BsiSI CCGG 1 cut(s) 611
BslI CCNNNNNNNGG 3 cut(s) 152, 1474, 1804
BsmAI GTCTC 2 cut(s) 150, 1176
BsnI GGCC 2 cut(s) 304, 1649
BsoBI CYCGRG 2 cut(s) 1268, 1627
Bsp1286I GDGCHC 4 cut(s) 273, 635, 1045, 1636
Bsp1407I TGTACA 1 cut(s) 937
Bsp143I GATC 6 cut(s) 66, 184, 225, 1299, 1407, 1711
Bsp1720I GCTNAGC 2 cut(s) 702, 1044
Bsp19I CCATGG 1 cut(s) 1564
BspACI CCGC 4 cut(s) 280, 449, 734, 1623
BspANI GGCC 2 cut(s) 304, 1649
BspCNI CTCAG 7 cut(s) 373, 490, 694, 1057, 1560, 1660, 1901
BspFNI CGCG 1 cut(s) 1235
BspHI TCATGA 1 cut(s) 685
BspMI ACCTGC 2 cut(s) 469, 1282
BspPI GGATC 2 cut(s) 61, 1415
BspTI CTTAAG 1 cut(s) 707
BsrDI GCAATG 3 cut(s) 607, 1248, 1576
BsrGI TGTACA 1 cut(s) 937
BsrI ACTGG 3 cut(s) 403, 1039, 1503
BssECI CCNNGG 3 cut(s) 199, 1564, 1733
BssHII GCGCGC 1 cut(s) 1233
BssMI GATC 6 cut(s) 66, 184, 225, 1299, 1407, 1711
BssT1I CCWWGG 1 cut(s) 1564
Bst2UI CCWGG 2 cut(s) 201, 1734
Bst4CI ACNGT 5 cut(s) 625, 942, 1018, 1538, 1765
Bst6I CTCTTC 2 cut(s) 285, 988
BstAFI CTTAAG 1 cut(s) 707
BstAUI TGTACA 1 cut(s) 937
BstBAI YACGTR 1 cut(s) 318
BstC8I GCNNGC 6 cut(s) 122, 635, 646, 1235, 1239, 1555
BstDSI CCRYGG 1 cut(s) 1564
BstENI CCTNNNNNAGG 1 cut(s) 1472
BstF5I GGATG 7 cut(s) 21, 30, 189, 591, 619, 868, 907
BstFNI CGCG 1 cut(s) 1235
BstHHI GCGC 4 cut(s) 650, 1027, 1235, 1237
BstKTI GATC 6 cut(s) 69, 187, 228, 1302, 1410, 1714
BstMAI GTCTC 2 cut(s) 150, 1176
BstMBI GATC 6 cut(s) 66, 184, 225, 1299, 1407, 1711
BstMWI GCNNNNNNNGC 4 cut(s) 277, 335, 650, 1575
BstNI CCWGG 2 cut(s) 201, 1734
BstNSI RCATGY 1 cut(s) 445
BstSCI CCNGG 2 cut(s) 199, 1732
BstSFI CTRYAG 1 cut(s) 621
BstUI CGCG 1 cut(s) 1235
BstV1I GCAGC 5 cut(s) 26, 67, 662, 1220, 1752
BstV2I GAAGAC 1 cut(s) 124
BstX2I RGATCY 2 cut(s) 66, 1711
BstXI CCANNNNNNTGG 1 cut(s) 200
BstYI RGATCY 2 cut(s) 66, 1711
BsuI GTATCC 1 cut(s) 1076
BsuRI GGCC 2 cut(s) 304, 1649
BtgI CCRYGG 1 cut(s) 1564
BtsCI GGATG 7 cut(s) 21, 30, 189, 591, 619, 868, 907
BtsI GCAGTG 2 cut(s) 573, 969
BtsIMutI CAGTG 8 cut(s) 573, 653, 969, 1032, 1510, 1555, 1761, 1854
BveI ACCTGC 2 cut(s) 469, 1282
Cac8I GCNNGC 6 cut(s) 122, 635, 646, 1235, 1239, 1555
CaiI CAGNNNCTG 1 cut(s) 1667
CciI TCATGA 1 cut(s) 685
CfoI GCGC 4 cut(s) 650, 1027, 1235, 1237
Cfr13I GGNCC 1 cut(s) 303
CseI GACGC 1 cut(s) 250
Csp6I GTAC 3 cut(s) 319, 938, 1125
CviQI GTAC 3 cut(s) 319, 938, 1125
DpnI GATC 6 cut(s) 68, 186, 227, 1301, 1409, 1713
DpnII GATC 6 cut(s) 66, 184, 225, 1299, 1407, 1711
EaeI YGGCCR 1 cut(s) 1647
Eam1104I CTCTTC 2 cut(s) 285, 988
EarI CTCTTC 2 cut(s) 285, 988
Ecl136II GAGCTC 1 cut(s) 271
Eco130I CCWWGG 1 cut(s) 1564
Eco24I GRGCYC 1 cut(s) 273
Eco32I GATATC 2 cut(s) 1315, 1605
Eco53kI GAGCTC 1 cut(s) 271
Eco57I CTGAAG 1 cut(s) 389
Eco88I CYCGRG 2 cut(s) 1268, 1627
EcoICRI GAGCTC 1 cut(s) 271
EcoNI CCTNNNNNAGG 1 cut(s) 1472
EcoRII CCWGG 2 cut(s) 199, 1732
EcoRV GATATC 2 cut(s) 1315, 1605
EcoT14I CCWWGG 1 cut(s) 1564
EcoT22I ATGCAT 2 cut(s) 23, 1192
EcoT38I GRGCYC 1 cut(s) 273
ErhI CCWWGG 1 cut(s) 1564
FbaI TGATCA 1 cut(s) 225
Fnu4HI GCNGC 6 cut(s) 40, 56, 651, 1209, 1624, 1741
FokI GGATG 7 cut(s) 8, 17, 176, 598, 626, 875, 914
FriOI GRGCYC 1 cut(s) 273
Fsp4HI GCNGC 6 cut(s) 40, 56, 651, 1209, 1624, 1741
FspBI CTAG 7 cut(s) 461, 717, 825, 870, 1049, 1421, 1469
FspI TGCGCA 1 cut(s) 649
GlaI GCGC 4 cut(s) 649, 1026, 1234, 1236
GluI GCNGC 6 cut(s) 40, 56, 651, 1209, 1624, 1741
GsuI CTGGAG 1 cut(s) 1196
HaeIII GGCC 2 cut(s) 304, 1649
HapII CCGG 1 cut(s) 611
HgaI GACGC 1 cut(s) 250
HhaI GCGC 4 cut(s) 650, 1027, 1235, 1237
Hin6I GCGC 4 cut(s) 648, 1025, 1233, 1235
HinP1I GCGC 4 cut(s) 648, 1025, 1233, 1235
HinfI GANTC 9 cut(s) 252, 413, 889, 1075, 1101, 1464, 1560, 1616, 1787
HpaII CCGG 1 cut(s) 611
HphI GGTGA 4 cut(s) 1309, 1705, 1787, 1796
Hpy166II GTNNAC 1 cut(s) 714
Hpy188I TCNGA 5 cut(s) 585, 728, 1440, 1609, 1718
Hpy188III TCNNGA 5 cut(s) 34, 362, 686, 1175, 1333
Hpy8I GTNNAC 1 cut(s) 714
Hpy99I CGWCG 1 cut(s) 585
HpyAV CCTTC 6 cut(s) 95, 359, 367, 1330, 1361, 1457
HpyCH4III ACNGT 5 cut(s) 625, 942, 1018, 1538, 1765
HpyCH4IV ACGT 1 cut(s) 317
HpyF10VI GCNNNNNNNGC 4 cut(s) 277, 335, 650, 1575
HpySE526I ACGT 1 cut(s) 317
HspAI GCGC 4 cut(s) 648, 1025, 1233, 1235
Ksp22I TGATCA 1 cut(s) 225
Kzo9I GATC 6 cut(s) 66, 184, 225, 1299, 1407, 1711
LmnI GCTCC 4 cut(s) 667, 1032, 1052, 1483
Lsp1109I GCAGC 5 cut(s) 26, 67, 662, 1220, 1752
LweI GCATC 8 cut(s) 23, 30, 483, 972, 1102, 1195, 1654, 1719
MaeI CTAG 7 cut(s) 461, 717, 825, 870, 1049, 1421, 1469
MaeII ACGT 1 cut(s) 317
MaeIII GTNAC 3 cut(s) 425, 523, 1684
MalI GATC 6 cut(s) 68, 186, 227, 1301, 1409, 1713
MboI GATC 6 cut(s) 66, 184, 225, 1299, 1407, 1711
MboII GAAGA 7 cut(s) 124, 172, 261, 302, 1005, 1691, 1871
MflI RGATCY 2 cut(s) 66, 1711
MhlI GDGCHC 4 cut(s) 273, 635, 1045, 1636
MlsI TGGCCA 1 cut(s) 1649
MluNI TGGCCA 1 cut(s) 1649
MlyI GAGTC 3 cut(s) 898, 1458, 1625
MmeI TCCRAC 4 cut(s) 49, 563, 720, 800
Mox20I TGGCCA 1 cut(s) 1649
Mph1103I ATGCAT 2 cut(s) 23, 1192
MroXI GAANNNNTTC 3 cut(s) 179, 785, 1497
MscI TGGCCA 1 cut(s) 1649
MseI TTAA 3 cut(s) 708, 1296, 1755
MslI CAYNNNNRTG 3 cut(s) 440, 690, 1569
Msp20I TGGCCA 1 cut(s) 1649
MspA1I CMGCKG 1 cut(s) 1623
MspCI CTTAAG 1 cut(s) 707
MspI CCGG 1 cut(s) 611
MspR9I CCNGG 2 cut(s) 201, 1734
MvaI CCWGG 2 cut(s) 201, 1734
MvnI CGCG 1 cut(s) 1235
MwoI GCNNNNNNNGC 4 cut(s) 277, 335, 650, 1575
NcoI CCATGG 1 cut(s) 1564
NdeII GATC 6 cut(s) 66, 184, 225, 1299, 1407, 1711
NmeAIII GCCGAG 1 cut(s) 196
NsbI TGCGCA 1 cut(s) 649
NsiI ATGCAT 2 cut(s) 23, 1192
NspI RCATGY 1 cut(s) 445
PaeR7I CTCGAG 2 cut(s) 1268, 1627
PagI TCATGA 1 cut(s) 685
PaqCI CACCTGC 1 cut(s) 469
PauI GCGCGC 1 cut(s) 1233
PciI ACATGT 1 cut(s) 441
PdmI GAANNNNTTC 3 cut(s) 179, 785, 1497
PfeI GAWTC 6 cut(s) 252, 413, 1075, 1101, 1560, 1787
PflMI CCANNNNNTGG 1 cut(s) 152
PkrI GCNGC 6 cut(s) 41, 57, 652, 1210, 1625, 1742
PleI GAGTC 3 cut(s) 897, 1458, 1624
PpsI GAGTC 3 cut(s) 897, 1458, 1624
Ppu21I YACGTR 1 cut(s) 318
PscI ACATGT 1 cut(s) 441
PshBI ATTAAT 1 cut(s) 1755
Psp124BI GAGCTC 1 cut(s) 273
Psp6I CCWGG 2 cut(s) 199, 1732
PspGI CCWGG 2 cut(s) 199, 1732
PspPI GGNCC 1 cut(s) 303
PspXI VCTCGAGB 2 cut(s) 1268, 1627
PstNI CAGNNNCTG 1 cut(s) 1667
PsuI RGATCY 2 cut(s) 66, 1711
PteI GCGCGC 1 cut(s) 1233
RsaI GTAC 3 cut(s) 320, 939, 1126
RsaNI GTAC 3 cut(s) 319, 938, 1125
RseI CAYNNNNRTG 3 cut(s) 440, 690, 1569
SacI GAGCTC 1 cut(s) 273
SaqAI TTAA 3 cut(s) 708, 1296, 1755
SatI GCNGC 6 cut(s) 40, 56, 651, 1209, 1624, 1741
Sau3AI GATC 6 cut(s) 66, 184, 225, 1299, 1407, 1711
Sau96I GGNCC 1 cut(s) 303
SchI GAGTC 3 cut(s) 898, 1458, 1625
ScrFI CCNGG 2 cut(s) 201, 1734
SduI GDGCHC 4 cut(s) 273, 635, 1045, 1636
SfaNI GCATC 8 cut(s) 23, 30, 483, 972, 1102, 1195, 1654, 1719
SfcI CTRYAG 1 cut(s) 621
Sfr274I CTCGAG 2 cut(s) 1268, 1627
SlaI CTCGAG 2 cut(s) 1268, 1627
SmiMI CAYNNNNRTG 3 cut(s) 440, 690, 1569
SmlI CTYRAG 4 cut(s) 707, 1268, 1333, 1627
SmoI CTYRAG 4 cut(s) 707, 1268, 1333, 1627
SpeI ACTAGT 2 cut(s) 716, 824
SsiI CCGC 4 cut(s) 280, 449, 734, 1623
SspMI CTAG 7 cut(s) 461, 717, 825, 870, 1049, 1421, 1469
SstI GAGCTC 1 cut(s) 273
StyD4I CCNGG 2 cut(s) 199, 1732
StyI CCWWGG 1 cut(s) 1564
TaaI ACNGT 5 cut(s) 625, 942, 1018, 1538, 1765
TaiI ACGT 1 cut(s) 320
TaqI TCGA 6 cut(s) 183, 411, 789, 1269, 1410, 1628
TatI WGTACW 1 cut(s) 937
TauI GCSGC 1 cut(s) 1626
TfiI GAWTC 6 cut(s) 252, 413, 1075, 1101, 1560, 1787
Tru1I TTAA 3 cut(s) 708, 1296, 1755
Tru9I TTAA 3 cut(s) 708, 1296, 1755
TscAI CASTG 8 cut(s) 573, 660, 969, 1039, 1510, 1555, 1768, 1854
TseI GCWGC 5 cut(s) 39, 55, 650, 1208, 1740
TspGWI ACGGA 5 cut(s) 569, 789, 1095, 1820, 1884
TspRI CASTG 8 cut(s) 573, 660, 969, 1039, 1510, 1555, 1768, 1854
Van91I CCANNNNNTGG 1 cut(s) 152
Vha464I CTTAAG 1 cut(s) 707
VspI ATTAAT 1 cut(s) 1755
XagI CCTNNNNNAGG 1 cut(s) 1472
XapI RAATTY 3 cut(s) 681, 795, 1010
XceI RCATGY 1 cut(s) 445
XcmI CCANNNNNNNNNTGG 1 cut(s) 346
XhoI CTCGAG 2 cut(s) 1268, 1627
XmnI GAANNNNTTC 3 cut(s) 179, 785, 1497
XspI CTAG 7 cut(s) 461, 717, 825, 870, 1049, 1421, 1469
Zsp2I ATGCAT 2 cut(s) 23, 1192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.