Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0014883

Physical Location & Seq

Genomic Coordinates Reverse (-)

9198162 .. 9200782

Gene Structure 2621 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGGCTTCCTCCATCCCAAAAGTGCTTTTGCAGTTTTTGCTTCTTTGTATAATCTTCTTCTCAACAAGTAAGGCTCTCTGCAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCAACAACTAATACTCTCAATCCCCATTTGTCTTCCATTAAATCCTTCTGCAAGTCCACTCCCTACCCCGATGTCTGTTTCGACTCACTGAAGCTCTCAATCTCCATCAACATCTCCCCCAACATCCTCACTTACCTCCTCCAATCCCTCCAAATCGCGCTATCCGAAGCCACAAAGCTCTCCGATCTTTTCTACAAGGCAGGACTTTACTCCAACATTGTTGAGAAACAAAAGGGAGCAATCCAGGACTGCAAAGACCTCCACCAGATCACACTCTCTTCCATAAAACGATCAGTTTCTGGAGTCAAGTCTTCGAACAACAAGAAACTAAGGGATGCAAGAGCCTATCTCAGTGCTGCCCTCACAAACAAGAACACATGCTTGGAAGGCTTGGAGTCTGCTTCTGGTCCTATGAAGCCAACCCTGGTCAGCTCCTTAACTAGTACATACAAGTATGTTAGCAACTCTCTTTCTGCTCTCAAGAGTCAAGTGCCTAATCCAAAAGGCCGTAAAAACCGGCGTCTGTTGGGAGTTCCGACATGGATTTCTTGGAGAGATCGCCGGATTCTGGAGAGCTCGGGTGACGAATATGACCCGAGTGAAATGCTGACAGTATCTGCAGATGGTAGTGGGAACTTCACCACCATCAGTGGTGCTGTTAATTTTGCTCCAAATAATAGTTACGACAGGACTATCATCTATGTCAAAGAAGGGGTTTATGATGAAAATGTGGAAATCCCAAGCTGGAAGACAAACATTGTTCTTCTTGGAGATGGAAGTGGCATCACTGTCATCACTGGTAACAGAAGCAATGCTGATGGTTGGACCACTTTCAGATCTGCAACAGTAGCTGTATCTGGGGAAGGCTTTCTGGCAAGAGACATAAGTATTGAAAACAGAGCAGGACCAGAGAAGCACCAAGCAGTTGCATTGAGAGTAAATGCAGACCTTGCTGCATTGTACAAGTGCGCCTTCAGCGGTTACCAAGACACAATGTATGTGCACTCTTTCAGACAGTTTTATAGAGAGTGTGATATCTCAGGGACCATAGACTACATATTTGGTAACGCCGCTGTGGTAATCCAAGATTGCAACATTATATCCAAGATGCCAATGCCGGGACAGTTCACCGTTATCACAGCACAAGCCAGGGACTCCGAAGAGGAGGATACCGGAATCTCAATACAGAATTGTTCAATTGTGGCTGCTGATGACTTGTACGCCAACAAGGACAGTGTCAAAAGTTACTTAGGCCGGCCGTGGAGGGTATACTCTAGGACAGTTTTCCTAGAGTCCTACATTGATGACTTCATTGACCCCAGTGGGTGGACAAATTGGTCTGGGGACCTAGGCTTGGACACTTTGTACTATGGAGAGTTTGAAAATTATGGACCTGGTTCAGGGACGGAGAGTAGAGTAAACTGGACAGGGTATCATATTATGGATTACTATGATGCATCAAATTTCACAGTATCAGAGTTCATTGCAGGTGATGAATGGCTGCAGTCCACTTCATTTCCTTATGATGATGGGATTGATGGCATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005623 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0043086 GO:0043207 GO:0044092 GO:0044464 GO:0046910 GO:0050790 GO:0050896 GO:0051704 GO:0051707 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

562

Amino Acids

61.58

Weight (kDa)

5.21

Isoelectric Point (pI)

45.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	58 - 205	2.4e-25	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	251 - 545	6.2e-137	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014883)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26440
fragaria_vesca	FvH4_1g09580
malus_domestica	MD02G1104400.v1.1 MD02G1104500.v1.1 MD15G1224800.v1.1
prunus_persica	Prupe.7G190400_v2.0.a1
pyrus_communis	pycom02g08230
rosa_chinensis	RchiOBHm_Chr2g0096441
rosa_laevigata	RLG00000016640
rosa_multiflora	Rmu_sc0004096.1_g000025
rosa_roxburghii	Rroxscaffold_2G00145650
rosa_samantha	Rh2AG104700 Rh2BG106900 Rh2CG108700 Rh2DG107800
rosa_wichuraiana	Rw2G008090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1619
AasI	GACNNNNNNGTC	1 cut(s)	1477
Acc36I	ACCTGC	1 cut(s)	1619
AccB7I	CCANNNNNTGG	1 cut(s)	1467
AccI	GTMKAC	1 cut(s)	1410
AccII	CGCG	1 cut(s)	299
AciI	CCGC	2 cut(s)	1119, 1212
AcoI	YGGCCR	1 cut(s)	1397
AcsI	RAATTY	1 cut(s)	1603
AcuI	CTGAAG	2 cut(s)	251, 1099
AcyI	GRCGYC	1 cut(s)	661
AfaI	GTAC	4 cut(s)	586, 1103, 1361, 1508
AfiI	CCNNNNNNNGG	5 cut(s)	709, 1259, 1467, 1495, 1541
AgsI	TTSAA	3 cut(s)	1034, 1338, 1523
AhlI	ACTAGT	1 cut(s)	581
AjnI	CCWGG	4 cut(s)	384, 564, 1289, 1534
AjuI	GAANNNNNNNTTGG	2 cut(s)	506, 538
AluBI	AGCT	6 cut(s)	235, 319, 573, 717, 885, 992
AluI	AGCT	6 cut(s)	235, 319, 573, 717, 885, 992
Alw21I	GWGCWC	2 cut(s)	719, 1146
Alw26I	GTCTC	1 cut(s)	1014
Alw44I	GTGCAC	1 cut(s)	1142
AlwNI	CAGNNNCTG	3 cut(s)	440, 758, 992
Ama87I	CYCGRG	2 cut(s)	718, 736
AoxI	GGCC	3 cut(s)	646, 1393, 1397
ApaLI	GTGCAC	1 cut(s)	1142
ApeKI	GCWGC	4 cut(s)	497, 1094, 1346, 1642
ApoI	RAATTY	1 cut(s)	1603
ArsI	GACNNNNNNTTYG	2 cut(s)	1184, 1216
Asp700I	GAANNNNTTC	1 cut(s)	1008
AspA2I	CCTAGG	1 cut(s)	1489
AspLEI	GCGC	2 cut(s)	301, 1112
AspS9I	GGNCC	6 cut(s)	548, 966, 1046, 1185, 1486, 1532
AsuC2I	CCSGG	1 cut(s)	1260
AsuHPI	GGTGA	4 cut(s)	734, 772, 1261, 1643
AsuII	TTCGAA	1 cut(s)	455
AvaI	CYCGRG	2 cut(s)	718, 736
AvaII	GGWCC	6 cut(s)	548, 966, 1046, 1185, 1486, 1532
AvrII	CCTAGG	1 cut(s)	1489
BaeGI	GKGCMC	1 cut(s)	1146
BanII	GRGCYC	1 cut(s)	719
BbsI	GAAGAC	3 cut(s)	165, 444, 896
Bbv12I	GWGCWC	2 cut(s)	719, 1146
BbvI	GCAGC	4 cut(s)	484, 1081, 1333, 1629
BccI	CCATC	8 cut(s)	20, 254, 758, 794, 908, 953, 1664, 1673
BceAI	ACGGC	2 cut(s)	633, 1384
BcgI	CGANNNNNNTGC	2 cut(s)	727, 761
BciT130I	CCWGG	4 cut(s)	386, 566, 1291, 1536
BciVI	GTATCC	1 cut(s)	1303
BcnI	CCSGG	1 cut(s)	1260
BcoDI	GTCTC	1 cut(s)	1014
BcuI	ACTAGT	1 cut(s)	581
BfaI	CTAG	4 cut(s)	582, 1416, 1430, 1490
BfmI	CTRYAG	2 cut(s)	759, 1643
BfuAI	ACCTGC	1 cut(s)	1619
BfuI	GTATCC	1 cut(s)	1303
BglII	AGATCT	1 cut(s)	977
BisI	GCNGC	5 cut(s)	498, 1095, 1212, 1347, 1643
BlnI	CCTAGG	1 cut(s)	1489
BlsI	GCNGC	5 cut(s)	499, 1096, 1213, 1348, 1644
Bme1390I	CCNGG	5 cut(s)	386, 566, 1260, 1291, 1536
Bme18I	GGWCC	6 cut(s)	548, 966, 1046, 1185, 1486, 1532
BmeT110I	CYCGRG	2 cut(s)	718, 736
BmgT120I	GGNCC	6 cut(s)	548, 966, 1046, 1185, 1486, 1532
BmiI	GGNNCC	2 cut(s)	1186, 1487
BmrFI	CCNGG	5 cut(s)	386, 566, 1260, 1291, 1536
BmrI	ACTGGG	1 cut(s)	1455
BmsI	GCATC	5 cut(s)	466, 933, 1239, 1585, 1607
BmuI	ACTGGG	1 cut(s)	1455
BpiI	GAAGAC	3 cut(s)	165, 444, 896
BplI	GAGNNNNNCTC	2 cut(s)	474, 506
BpmI	CTGGAG	2 cut(s)	462, 731
Bpu14I	TTCGAA	1 cut(s)	455
BpuEI	CTTGAG	1 cut(s)	605
BpuMI	CCSGG	1 cut(s)	1260
BsaHI	GRCGYC	1 cut(s)	661
BsaJI	CCNNGG	4 cut(s)	564, 1290, 1400, 1489
BsaWI	WCCGGW	1 cut(s)	1313
Bsc4I	CCNNNNNNNGG	5 cut(s)	709, 1259, 1467, 1495, 1541
Bse118I	RCCGGY	2 cut(s)	657, 1395
Bse1I	ACTGG	3 cut(s)	943, 1461, 1568
Bse3DI	GCAATG	2 cut(s)	958, 1623
BseBI	CCWGG	4 cut(s)	386, 566, 1291, 1536
BseDI	CCNNGG	4 cut(s)	564, 1290, 1400, 1489
BseGI	GGATG	3 cut(s)	12, 264, 481
BseLI	CCNNNNNNNGG	5 cut(s)	709, 1259, 1467, 1495, 1541
BseMI	GCAATG	2 cut(s)	958, 1623
BseMII	CTCAG	2 cut(s)	505, 1194
BseNI	ACTGG	3 cut(s)	943, 1461, 1568
BseRI	GAGGAG	2 cut(s)	269, 1319
BseSI	GKGCMC	1 cut(s)	1146
BseX3I	CGGCCG	1 cut(s)	1397
BseXI	GCAGC	4 cut(s)	484, 1081, 1333, 1629
Bsh1236I	CGCG	1 cut(s)	299
Bsh1285I	CGRYCG	1 cut(s)	1400
BshFI	GGCC	3 cut(s)	648, 1395, 1399
BsiEI	CGRYCG	1 cut(s)	1400
BsiHKAI	GWGCWC	2 cut(s)	719, 1146
BsiHKCI	CYCGRG	2 cut(s)	718, 736
BsiSI	CCGG	5 cut(s)	658, 703, 1259, 1314, 1396
BslFI	GGGAC	5 cut(s)	1198, 1275, 1307, 1499, 1558
BslI	CCNNNNNNNGG	5 cut(s)	709, 1259, 1467, 1495, 1541
BsmAI	GTCTC	1 cut(s)	1014
BsmFI	GGGAC	5 cut(s)	1198, 1275, 1307, 1499, 1558
BsnI	GGCC	3 cut(s)	648, 1395, 1399
BsoBI	CYCGRG	2 cut(s)	718, 736
Bsp119I	TTCGAA	1 cut(s)	455
Bsp1286I	GDGCHC	2 cut(s)	719, 1146
Bsp1407I	TGTACA	1 cut(s)	1101
Bsp143I	GATC	5 cut(s)	325, 408, 431, 697, 977
BspACI	CCGC	2 cut(s)	1119, 1212
BspANI	GGCC	3 cut(s)	648, 1395, 1399
BspCNI	CTCAG	2 cut(s)	504, 1193
BspFNI	CGCG	1 cut(s)	299
BspLI	GGNNCC	2 cut(s)	1186, 1487
BspMAI	CTGCAG	2 cut(s)	763, 1647
BspMI	ACCTGC	1 cut(s)	1619
BspT104I	TTCGAA	1 cut(s)	455
BsrDI	GCAATG	2 cut(s)	958, 1623
BsrFI	RCCGGY	2 cut(s)	657, 1395
BsrGI	TGTACA	1 cut(s)	1101
BsrI	ACTGG	3 cut(s)	943, 1461, 1568
BssAI	RCCGGY	2 cut(s)	657, 1395
BssECI	CCNNGG	4 cut(s)	564, 1290, 1400, 1489
BssMI	GATC	5 cut(s)	325, 408, 431, 697, 977
BssNAI	GTATAC	1 cut(s)	1411
BssNI	GRCGYC	1 cut(s)	661
BssT1I	CCWWGG	1 cut(s)	1489
Bst1107I	GTATAC	1 cut(s)	1411
Bst2UI	CCWGG	4 cut(s)	386, 566, 1291, 1536
Bst4CI	ACNGT	9 cut(s)	754, 931, 988, 1158, 1266, 1273, 1376, 1423, 1612
Bst6I	CTCTTC	2 cut(s)	424, 1296
BstACI	GRCGYC	1 cut(s)	661
BstAPI	GCANNNNNTGC	2 cut(s)	37, 1091
BstAUI	TGTACA	1 cut(s)	1101
BstBI	TTCGAA	1 cut(s)	455
BstC8I	GCNNGC	1 cut(s)	1397
BstDEI	CTNAG	4 cut(s)	470, 491, 1180, 1390
BstDSI	CCRYGG	1 cut(s)	1400
BstEII	GGTNACC	1 cut(s)	1121
BstENI	CCTNNNNNAGG	1 cut(s)	1539
BstF5I	GGATG	3 cut(s)	12, 264, 481
BstFNI	CGCG	1 cut(s)	299
BstHHI	GCGC	2 cut(s)	301, 1112
BstKTI	GATC	5 cut(s)	328, 411, 434, 700, 980
BstMAI	GTCTC	1 cut(s)	1014
BstMBI	GATC	5 cut(s)	325, 408, 431, 697, 977
BstMCI	CGRYCG	1 cut(s)	1400
BstMWI	GCNNNNNNNGC	5 cut(s)	37, 528, 989, 1091, 1116
BstNI	CCWGG	4 cut(s)	386, 566, 1291, 1536
BstNSI	RCATGY	1 cut(s)	522
BstPI	GGTNACC	1 cut(s)	1121
BstSCI	CCNGG	5 cut(s)	384, 564, 1258, 1289, 1534
BstSFI	CTRYAG	2 cut(s)	759, 1643
BstSLI	GKGCMC	1 cut(s)	1146
BstUI	CGCG	1 cut(s)	299
BstV1I	GCAGC	4 cut(s)	484, 1081, 1333, 1629
BstV2I	GAAGAC	3 cut(s)	165, 444, 896
BstX2I	RGATCY	1 cut(s)	977
BstYI	RGATCY	1 cut(s)	977
BstZ17I	GTATAC	1 cut(s)	1411
BstZI	CGGCCG	1 cut(s)	1397
BsuI	GTATCC	1 cut(s)	1303
BsuRI	GGCC	3 cut(s)	648, 1395, 1399
BtgI	CCRYGG	1 cut(s)	1400
BtsCI	GGATG	3 cut(s)	12, 264, 481
BtsIMutI	CAGTG	7 cut(s)	227, 499, 796, 927, 936, 1381, 1468
BveI	ACCTGC	1 cut(s)	1619
Cac8I	GCNNGC	1 cut(s)	1397
CaiI	CAGNNNCTG	3 cut(s)	440, 758, 992
CfoI	GCGC	2 cut(s)	301, 1112
Cfr10I	RCCGGY	2 cut(s)	657, 1395
Cfr13I	GGNCC	6 cut(s)	548, 966, 1046, 1185, 1486, 1532
CseI	GACGC	1 cut(s)	650
CsiI	ACCWGGT	1 cut(s)	1534
Csp6I	GTAC	4 cut(s)	585, 1102, 1360, 1507
CviAII	CATG	2 cut(s)	519, 681
CviQI	GTAC	4 cut(s)	585, 1102, 1360, 1507
DdeI	CTNAG	4 cut(s)	470, 491, 1180, 1390
DpnI	GATC	5 cut(s)	327, 410, 433, 699, 979
DpnII	GATC	5 cut(s)	325, 408, 431, 697, 977
DrdI	GACNNNNNNGTC	1 cut(s)	1477
DseDI	GACNNNNNNGTC	1 cut(s)	1477
EaeI	YGGCCR	1 cut(s)	1397
EagI	CGGCCG	1 cut(s)	1397
Eam1104I	CTCTTC	2 cut(s)	424, 1296
EarI	CTCTTC	2 cut(s)	424, 1296
Ecl136II	GAGCTC	1 cut(s)	717
EclXI	CGGCCG	1 cut(s)	1397
Eco130I	CCWWGG	1 cut(s)	1489
Eco24I	GRGCYC	1 cut(s)	719
Eco32I	GATATC	1 cut(s)	1177
Eco47I	GGWCC	6 cut(s)	548, 966, 1046, 1185, 1486, 1532
Eco52I	CGGCCG	1 cut(s)	1397
Eco53kI	GAGCTC	1 cut(s)	717
Eco57I	CTGAAG	2 cut(s)	251, 1099
Eco88I	CYCGRG	2 cut(s)	718, 736
Eco91I	GGTNACC	1 cut(s)	1121
EcoICRI	GAGCTC	1 cut(s)	717
EcoNI	CCTNNNNNAGG	1 cut(s)	1539
EcoO109I	RGGNCCY	1 cut(s)	1486
EcoO65I	GGTNACC	1 cut(s)	1121
EcoRII	CCWGG	4 cut(s)	384, 564, 1289, 1534
EcoRV	GATATC	1 cut(s)	1177
EcoT14I	CCWWGG	1 cut(s)	1489
EcoT22I	ATGCAT	1 cut(s)	1600
EcoT38I	GRGCYC	1 cut(s)	719
ErhI	CCWWGG	1 cut(s)	1489
FaeI	CATG	2 cut(s)	522, 684
FalI	AAGNNNNNCTT	2 cut(s)	1097, 1129
FaqI	GGGAC	5 cut(s)	1198, 1275, 1307, 1499, 1558
FatI	CATG	2 cut(s)	518, 680
FblI	GTMKAC	1 cut(s)	1410
Fnu4HI	GCNGC	5 cut(s)	498, 1095, 1212, 1347, 1643
FokI	GGATG	2 cut(s)	251, 488
FriOI	GRGCYC	1 cut(s)	719
FseI	GGCCGGCC	1 cut(s)	1399
Fsp4HI	GCNGC	5 cut(s)	498, 1095, 1212, 1347, 1643
FspBI	CTAG	4 cut(s)	582, 1416, 1430, 1490
GlaI	GCGC	2 cut(s)	300, 1111
GluI	GCNGC	5 cut(s)	498, 1095, 1212, 1347, 1643
GsuI	CTGGAG	2 cut(s)	462, 731
HaeIII	GGCC	3 cut(s)	648, 1395, 1399
HapII	CCGG	5 cut(s)	658, 703, 1259, 1314, 1396
HgaI	GACGC	1 cut(s)	650
HhaI	GCGC	2 cut(s)	301, 1112
Hin1I	GRCGYC	1 cut(s)	661
Hin1II	CATG	2 cut(s)	522, 684
Hin6I	GCGC	2 cut(s)	299, 1110
HinP1I	GCGC	2 cut(s)	299, 1110
HinfI	GANTC	8 cut(s)	224, 444, 536, 625, 706, 1295, 1317, 1433
HpaII	CCGG	5 cut(s)	658, 703, 1259, 1314, 1396
HphI	GGTGA	4 cut(s)	734, 772, 1261, 1643
Hpy166II	GTNNAC	7 cut(s)	198, 1144, 1269, 1411, 1470, 1561, 1650
Hpy188I	TCNGA	8 cut(s)	307, 325, 678, 977, 1154, 1300, 1618, 1688
Hpy188III	TCNNGA	3 cut(s)	441, 622, 710
Hpy8I	GTNNAC	7 cut(s)	198, 1144, 1269, 1411, 1470, 1561, 1650
HpyAV	CCTTC	5 cut(s)	196, 521, 845, 998, 1123
HpyCH4III	ACNGT	9 cut(s)	754, 931, 988, 1158, 1266, 1273, 1376, 1423, 1612
HpyF10VI	GCNNNNNNNGC	5 cut(s)	37, 528, 989, 1091, 1116
HpyF3I	CTNAG	4 cut(s)	470, 491, 1180, 1390
Hsp92I	GRCGYC	1 cut(s)	661
Hsp92II	CATG	2 cut(s)	522, 684
HspAI	GCGC	2 cut(s)	299, 1110
KroI	GCCGGC	1 cut(s)	1395
KroNI	GCCGGC	1 cut(s)	1397
Kzo9I	GATC	5 cut(s)	325, 408, 431, 697, 977
LmnI	GCTCC	3 cut(s)	377, 578, 814
Lsp1109I	GCAGC	4 cut(s)	484, 1081, 1333, 1629
LweI	GCATC	5 cut(s)	466, 933, 1239, 1585, 1607
MabI	ACCWGGT	1 cut(s)	1534
MaeI	CTAG	4 cut(s)	582, 1416, 1430, 1490
MaeIII	GTNAC	6 cut(s)	722, 821, 941, 1121, 1205, 1385
MalI	GATC	5 cut(s)	327, 410, 433, 699, 979
MboI	GATC	5 cut(s)	325, 408, 431, 697, 977
MfeI	CAATTG	1 cut(s)	1338
MflI	RGATCY	1 cut(s)	977
MhlI	GDGCHC	2 cut(s)	719, 1146
MluCI	AATT	7 cut(s)	82, 802, 1330, 1338, 1474, 1525, 1603
MlyI	GAGTC	6 cut(s)	218, 453, 545, 634, 1289, 1442
MmeI	TCCRAC	3 cut(s)	378, 701, 944
Mph1103I	ATGCAT	1 cut(s)	1600
MroNI	GCCGGC	1 cut(s)	1395
MroXI	GAANNNNTTC	1 cut(s)	1008
MseI	TTAA	3 cut(s)	180, 578, 801
MspA1I	CMGCKG	2 cut(s)	1119, 1214
MspI	CCGG	5 cut(s)	658, 703, 1259, 1314, 1396
MspR9I	CCNGG	5 cut(s)	386, 566, 1260, 1291, 1536
MunI	CAATTG	1 cut(s)	1338
MvaI	CCWGG	4 cut(s)	386, 566, 1291, 1536
MvnI	CGCG	1 cut(s)	299
MwoI	GCNNNNNNNGC	5 cut(s)	37, 528, 989, 1091, 1116
NaeI	GCCGGC	1 cut(s)	1397
NciI	CCSGG	1 cut(s)	1260
NdeII	GATC	5 cut(s)	325, 408, 431, 697, 977
NgoMIV	GCCGGC	1 cut(s)	1395
NlaIII	CATG	2 cut(s)	522, 684
NlaIV	GGNNCC	2 cut(s)	1186, 1487
NmuCI	GTSAC	1 cut(s)	722
NsiI	ATGCAT	1 cut(s)	1600
NspI	RCATGY	1 cut(s)	522
NspV	TTCGAA	1 cut(s)	455
PaqCI	CACCTGC	1 cut(s)	1619
PcsI	WCGNNNNNNNCGW	1 cut(s)	303
PdiI	GCCGGC	1 cut(s)	1397
PdmI	GAANNNNTTC	1 cut(s)	1008
PfeI	GAWTC	2 cut(s)	706, 1317
PflFI	GACNNNGTC	1 cut(s)	1376
PflMI	CCANNNNNTGG	1 cut(s)	1467
PfoI	TCCNGGA	1 cut(s)	384
PkrI	GCNGC	5 cut(s)	499, 1096, 1213, 1348, 1644
PleI	GAGTC	6 cut(s)	218, 452, 544, 633, 1289, 1441
PpsI	GAGTC	6 cut(s)	218, 452, 544, 633, 1289, 1441
PpuMI	RGGWCCY	1 cut(s)	1486
Psp124BI	GAGCTC	1 cut(s)	719
Psp5II	RGGWCCY	1 cut(s)	1486
Psp6I	CCWGG	4 cut(s)	384, 564, 1289, 1534
PspEI	GGTNACC	1 cut(s)	1121
PspGI	CCWGG	4 cut(s)	384, 564, 1289, 1534
PspN4I	GGNNCC	2 cut(s)	1186, 1487
PspPI	GGNCC	6 cut(s)	548, 966, 1046, 1185, 1486, 1532
PspPPI	RGGWCCY	1 cut(s)	1486
PstI	CTGCAG	2 cut(s)	763, 1647
PstNI	CAGNNNCTG	3 cut(s)	440, 758, 992
PsuI	RGATCY	1 cut(s)	977
PsyI	GACNNNGTC	1 cut(s)	1376
RigI	GGCCGGCC	1 cut(s)	1399
RsaI	GTAC	4 cut(s)	586, 1103, 1361, 1508
RsaNI	GTAC	4 cut(s)	585, 1102, 1360, 1507
SacI	GAGCTC	1 cut(s)	719
SaqAI	TTAA	3 cut(s)	180, 578, 801
SatI	GCNGC	5 cut(s)	498, 1095, 1212, 1347, 1643
Sau3AI	GATC	5 cut(s)	325, 408, 431, 697, 977
Sau96I	GGNCC	6 cut(s)	548, 966, 1046, 1185, 1486, 1532
SchI	GAGTC	6 cut(s)	218, 453, 545, 634, 1289, 1442
ScrFI	CCNGG	5 cut(s)	386, 566, 1260, 1291, 1536
SduI	GDGCHC	2 cut(s)	719, 1146
SexAI	ACCWGGT	1 cut(s)	1534
SfaNI	GCATC	5 cut(s)	466, 933, 1239, 1585, 1607
SfcI	CTRYAG	2 cut(s)	759, 1643
SfuI	TTCGAA	1 cut(s)	455
SinI	GGWCC	6 cut(s)	548, 966, 1046, 1185, 1486, 1532
SmlI	CTYRAG	1 cut(s)	620
SmoI	CTYRAG	1 cut(s)	620
SpeI	ACTAGT	1 cut(s)	581
Sse9I	AATT	7 cut(s)	82, 802, 1330, 1338, 1474, 1525, 1603
SsiI	CCGC	2 cut(s)	1119, 1212
SspMI	CTAG	4 cut(s)	582, 1416, 1430, 1490
SstI	GAGCTC	1 cut(s)	719
StyD4I	CCNGG	5 cut(s)	384, 564, 1258, 1289, 1534
StyI	CCWWGG	1 cut(s)	1489
TaaI	ACNGT	9 cut(s)	754, 931, 988, 1158, 1266, 1273, 1376, 1423, 1612
TaqI	TCGA	2 cut(s)	222, 455
TasI	AATT	7 cut(s)	82, 802, 1330, 1338, 1474, 1525, 1603
TatI	WGTACW	3 cut(s)	584, 1101, 1506
TauI	GCSGC	1 cut(s)	1214
TfiI	GAWTC	2 cut(s)	706, 1317
Tru1I	TTAA	3 cut(s)	180, 578, 801
Tru9I	TTAA	3 cut(s)	180, 578, 801
TscAI	CASTG	7 cut(s)	234, 499, 796, 934, 943, 1381, 1468
TseFI	GTSAC	1 cut(s)	722
TseI	GCWGC	4 cut(s)	497, 1094, 1346, 1642
Tsp45I	GTSAC	1 cut(s)	722
TspDTI	ATGAA	7 cut(s)	129, 569, 879, 1441, 1612, 1644, 1650
TspGWI	ACGGA	1 cut(s)	1562
TspRI	CASTG	7 cut(s)	234, 499, 796, 934, 943, 1381, 1468
Tth111I	GACNNNGTC	1 cut(s)	1376
Van91I	CCANNNNNTGG	1 cut(s)	1467
VneI	GTGCAC	1 cut(s)	1142
VpaK11BI	GGWCC	6 cut(s)	548, 966, 1046, 1185, 1486, 1532
XagI	CCTNNNNNAGG	1 cut(s)	1539
XapI	RAATTY	1 cut(s)	1603
XceI	RCATGY	1 cut(s)	522
XmaJI	CCTAGG	1 cut(s)	1489
XmiI	GTMKAC	1 cut(s)	1410
XmnI	GAANNNNTTC	1 cut(s)	1008
XspI	CTAG	4 cut(s)	582, 1416, 1430, 1490
Zsp2I	ATGCAT	1 cut(s)	1600

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.