RchiOBHm_Chr1g0331171

Bacterial extracellular solute-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0011078
Physical Location & Seq
Forward (+)
20992612 .. 20997241
4630 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1614 bp
ATGGCTACTGCTCCATTGCTGCCGTCACGCATCTGGTTCCACTTGGATCCCTCATGTTCCCAATTCCAAAGCCCAAACCTTAATCCCTCCTTCCCTCTCCGCCGTCGCTCTAATCATACTCATAGCCTCACTCTCACACTCGTCTCTTCTGCCCACACTCTCACTCCGCCGGAGCCGCCGCCGCCTACTTCCACCACCGTCCCTCACACCTTGCTTCGGTTCGCCGCCTCCGCCGCCCTCCTTCTCGGGATTGGGCTCGGATGCTGCGTCGCCTCCGCCCGCTCTTCTCCTCTAGCCCAGCCTCCGCCGGCGCTACAGGATCAAGCTACGGATGATGACAATTTAGAAGCGGCGTTTGGAACTTGGAAGTCCAAGACATTCGCTTTGACTGTGCCCTTGACAGTTGCTGCTCTACGCGGCTCTGTACCTCCTTCATGGATTAAGGATTTTATGCAGTCTCAAGGAAAAAGATCAAAGCTTCAACTCAAGTCTCATGCAAGTCTCGAGAGCGTATTTTCGGATCTCTCAAGAGACTTCAGCAAAGGCGATGTTCGGCCTTCTTCTGTTGCGGCTGCTGATGTAGTTAGTATTGGGGACTCTTGGCTCAGTCATGCCATTAACAAGGGTCTAATTGAGCCAATTCAAGGGGTAGAAGACCAGGATTGGTATAAAGGATTGAGTGACAGATGGAAAGTATATCTACGCAGGAACTCTGAGGGGAGAATTGACCCTGATGGTAAAATATGGGCTGCTCCATATCGGTGGGGCTGCATGGTGATAGCATACAAAAAAACTAAATTTAGAAAGCATAACTTGGCTCCTATATCGGACTGGGCAGATTTATGGCGACCTGAACTTGCAGGAAGGATTTCAATGGTTGATTCTTCTAGAGAGGTTATCGGTGCAGTTCTGAAGCATATGGGAACCTCCTACAACACACAAGATATCCATTTGCAAGTTGATGGTGGGAAAGATGCTGTAAGGCAAAATCTGGCTTTACTTGGAAAACAGGTCCGACTATTTGACAGTGTACACTATTTGAAAGCATTTGCAGTTGGAGATGTGTGGGTGGCTGTCGGGTGGAGCAGTGATGTTCTTCCTGTTGCCAAACGCATGTCTGATGTTGCAGTAATTGTTCCGAAATCTGGAACTAGTATATGGGCAGATATGTGGGCAACCCCTGCTGTCTCTCGACTTGAAACAAATCGAATTGGGGGGCGAGTTAGAGGGCCATCTCCACTCATCCATCAGTGGATAGACTTCTGCTTGCAAACTGCTAGAGCACTCCCTTTTAAGCAGGAGGTAATCCCAGGCGCCTCCCCCTCTGCACTTGATAGTGCCCCGGCTGAAAATTTAGAAGAGTTCACCAAGGGTAAGCCAAGACTGGATACAAACCTCATTGTGGGAGTACCGCCACCTGAGATTTTGGCAAGGTGTGAGTTTTTGGAGCCATTATCTGACTCCACACTATCAGATTATCAATCGCTAATAGATAGTATGCAGAAATCTAAACATGGTTTGGTCCCTAGTATAAATTACAATATCTTATCATTGATTCAAAATTTGTGGTTGAAGCTGCATTCAAATAATAACAAGAGCTTGAAGCAAGTTTAG

Protein Analysis

537

Amino Acids

59.04

Weight (kDa)

9.14

Isoelectric Point (pI)

53.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SBP_bac_1 PF01547 174 - 386 8.3e-06 Bacterial extracellular solute-binding protein
SBP_bac_8 PF13416 190 - 397 2.8e-17 Bacterial extracellular solute-binding protein
SBP_bac_11 PF13531 191 - 367 3.8e-06 Bacterial extracellular solute-binding protein
SBP_bac_6 PF13343 192 - 450 2.5e-23 Bacterial extracellular solute-binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011078)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31410
fragaria_vesca FvH4_3g41920 FvH4_3g41920 FvH4_3g41920
malus_domestica MD07G1026800.v1.1
prunus_persica Prupe.2G060600_v2.0.a1 Prupe.2G060600_v2.0.a1
pyrus_communis pycom07g02020 pycom07g02060
rosa_chinensis RchiOBHm_Chr1g0331171
rosa_laevigata RLG00000029748
rosa_multiflora Rmu_sc0005711.1_g000003
rosa_roxburghii Rroxscaffold_4G00319290
rosa_rugosa Rorug01G0091900 Rorug01G0092000
rosa_samantha Rh1AG116000 Rh1BG087700 Rh1CG111500 Rh1DG120400
rosa_wichuraiana Rw1G009320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1313
AccBSI CCGCTC 1 cut(s) 282
AccII CGCG 1 cut(s) 417
AclWI GGATC 4 cut(s) 41, 54, 327, 528
AcsI RAATTY 3 cut(s) 797, 1351, 1561
AcuI CTGAAG 2 cut(s) 520, 932
AcyI GRCGYC 1 cut(s) 1314
AfaI GTAC 3 cut(s) 426, 1032, 1410
AfiI CCNNNNNNNGG 4 cut(s) 216, 644, 1145, 1402
AgsI TTSAA 9 cut(s) 482, 644, 873, 1042, 1199, 1559, 1573, 1584, 1603
AhlI ACTAGT 1 cut(s) 1151
AjnI CCWGG 2 cut(s) 657, 1309
AjuI GAANNNNNNNTTGG 2 cut(s) 339, 371
AluBI AGCT 4 cut(s) 326, 478, 1576, 1599
AluI AGCT 4 cut(s) 326, 478, 1576, 1599
Alw21I GWGCWC 1 cut(s) 1285
Alw26I GTCTC 6 cut(s) 148, 462, 495, 506, 525, 1192
AlwI GGATC 4 cut(s) 41, 54, 327, 528
AlwNI CAGNNNCTG 1 cut(s) 407
Ama87I CYCGRG 2 cut(s) 245, 503
AoxI GGCC 2 cut(s) 554, 1229
ApeKI GCWGC 7 cut(s) 19, 264, 407, 572, 749, 768, 1576
ApoI RAATTY 3 cut(s) 797, 1351, 1561
ArsI GACNNNNNNTTYG 2 cut(s) 367, 399
Asp700I GAANNNNTTC 1 cut(s) 868
AspLEI GCGC 2 cut(s) 313, 1316
AspS9I GGNCC 3 cut(s) 1012, 1229, 1522
AsuC2I CCSGG 1 cut(s) 1343
AsuHPI GGTGA 2 cut(s) 787, 1357
AvaI CYCGRG 2 cut(s) 245, 503
AvaII GGWCC 2 cut(s) 1012, 1522
BaeGI GKGCMC 2 cut(s) 396, 1342
BamHI GGATCC 1 cut(s) 46
BanI GGYRCC 1 cut(s) 1313
BanII GRGCYC 1 cut(s) 258
BbsI GAAGAC 1 cut(s) 660
Bbv12I GWGCWC 1 cut(s) 1285
BbvI GCAGC 7 cut(s) 6, 251, 394, 559, 736, 755, 1563
BccI CCATC 5 cut(s) 681, 728, 956, 1240, 1254
BceAI ACGGC 2 cut(s) 7, 87
BciT130I CCWGG 2 cut(s) 659, 1311
BciVI GTATCC 1 cut(s) 1381
BcnI CCSGG 1 cut(s) 1343
BcoDI GTCTC 6 cut(s) 148, 462, 495, 506, 525, 1192
BcuI ACTAGT 1 cut(s) 1151
BfaI CTAG 5 cut(s) 293, 888, 1152, 1278, 1527
BfmI CTRYAG 1 cut(s) 314
BfoI RGCGCY 2 cut(s) 314, 1317
BfuI GTATCC 1 cut(s) 1381
Bme1390I CCNGG 3 cut(s) 659, 1311, 1343
Bme18I GGWCC 2 cut(s) 1012, 1522
BmeT110I CYCGRG 2 cut(s) 245, 503
BmgT120I GGNCC 3 cut(s) 1012, 1229, 1522
BmiI GGNNCC 8 cut(s) 38, 48, 174, 819, 925, 1315, 1449, 1524
BmrFI CCNGG 3 cut(s) 659, 1311, 1343
BmrI ACTGGG 1 cut(s) 841
BmsI GCATC 3 cut(s) 39, 251, 964
BmuI ACTGGG 1 cut(s) 841
BpiI GAAGAC 1 cut(s) 660
BpuEI CTTGAG 3 cut(s) 444, 470, 511
BpuMI CCSGG 1 cut(s) 1343
BsaHI GRCGYC 1 cut(s) 1314
BsaJI CCNNGG 3 cut(s) 1309, 1341, 1368
BsaXI ACNNNNNCTCC 2 cut(s) 148, 178
Bsc4I CCNNNNNNNGG 4 cut(s) 216, 644, 1145, 1402
Bse118I RCCGGY 1 cut(s) 307
Bse1I ACTGG 2 cut(s) 836, 1389
Bse3DI GCAATG 1 cut(s) 14
BseBI CCWGG 2 cut(s) 659, 1311
BseDI CCNNGG 3 cut(s) 1309, 1341, 1368
BseGI GGATG 3 cut(s) 266, 337, 1242
BseLI CCNNNNNNNGG 4 cut(s) 216, 644, 1145, 1402
BseMI GCAATG 1 cut(s) 14
BseMII CTCAG 3 cut(s) 619, 705, 1410
BseNI ACTGG 2 cut(s) 836, 1389
BseRI GAGGAG 1 cut(s) 279
BseSI GKGCMC 2 cut(s) 396, 1342
BseXI GCAGC 7 cut(s) 6, 251, 394, 559, 736, 755, 1563
BseYI CCCAGC 1 cut(s) 297
BsgI GTGCAG 2 cut(s) 924, 1311
Bsh1236I CGCG 1 cut(s) 417
BshFI GGCC 2 cut(s) 556, 1231
BshNI GGYRCC 1 cut(s) 1313
BsiHKAI GWGCWC 1 cut(s) 1285
BsiHKCI CYCGRG 2 cut(s) 245, 503
BsiSI CCGG 3 cut(s) 170, 308, 1343
BslFI GGGAC 3 cut(s) 185, 608, 1508
BslI CCNNNNNNNGG 4 cut(s) 216, 644, 1145, 1402
BsmAI GTCTC 6 cut(s) 148, 462, 495, 506, 525, 1192
BsmBI CGTCTC 1 cut(s) 148
BsmFI GGGAC 3 cut(s) 185, 608, 1508
BsmI GAATGC 1 cut(s) 1579
BsnI GGCC 2 cut(s) 556, 1231
BsoBI CYCGRG 2 cut(s) 245, 503
Bsp1286I GDGCHC 4 cut(s) 258, 396, 1285, 1342
Bsp1407I TGTACA 1 cut(s) 1030
Bsp143I GATC 4 cut(s) 46, 319, 470, 520
BspANI GGCC 2 cut(s) 556, 1231
BspCNI CTCAG 3 cut(s) 618, 706, 1411
BspFNI CGCG 1 cut(s) 417
BspLI GGNNCC 8 cut(s) 38, 48, 174, 819, 925, 1315, 1449, 1524
BspPI GGATC 4 cut(s) 41, 54, 327, 528
BspQI GCTCTTC 1 cut(s) 289
BspT107I GGYRCC 1 cut(s) 1313
BsrBI CCGCTC 1 cut(s) 282
BsrDI GCAATG 1 cut(s) 14
BsrFI RCCGGY 1 cut(s) 307
BsrGI TGTACA 1 cut(s) 1030
BsrI ACTGG 2 cut(s) 836, 1389
BssAI RCCGGY 1 cut(s) 307
BssECI CCNNGG 3 cut(s) 1309, 1341, 1368
BssMI GATC 4 cut(s) 46, 319, 470, 520
BssNI GRCGYC 1 cut(s) 1314
BssT1I CCWWGG 1 cut(s) 1368
Bst2UI CCWGG 2 cut(s) 659, 1311
Bst4CI ACNGT 4 cut(s) 199, 391, 403, 1028
Bst6I CTCTTC 3 cut(s) 151, 289, 1353
BstACI GRCGYC 1 cut(s) 1314
BstAPI GCANNNNNTGC 1 cut(s) 1181
BstAUI TGTACA 1 cut(s) 1030
BstC8I GCNNGC 3 cut(s) 280, 309, 1268
BstDEI CTNAG 3 cut(s) 605, 714, 1419
BstF5I GGATG 3 cut(s) 266, 337, 1242
BstFNI CGCG 1 cut(s) 417
BstH2I RGCGCY 2 cut(s) 314, 1317
BstHHI GCGC 2 cut(s) 313, 1316
BstKTI GATC 4 cut(s) 49, 322, 473, 523
BstMAI GTCTC 6 cut(s) 148, 462, 495, 506, 525, 1192
BstMBI GATC 4 cut(s) 46, 319, 470, 520
BstMWI GCNNNNNNNGC 5 cut(s) 175, 181, 230, 233, 1181
BstNI CCWGG 2 cut(s) 659, 1311
BstNSI RCATGY 1 cut(s) 1117
BstSCI CCNGG 3 cut(s) 657, 1309, 1341
BstSFI CTRYAG 1 cut(s) 314
BstSLI GKGCMC 2 cut(s) 396, 1342
BstUI CGCG 1 cut(s) 417
BstV1I GCAGC 7 cut(s) 6, 251, 394, 559, 736, 755, 1563
BstV2I GAAGAC 1 cut(s) 660
BstX2I RGATCY 2 cut(s) 46, 520
BstXI CCANNNNNNTGG 1 cut(s) 762
BstYI RGATCY 2 cut(s) 46, 520
BsuI GTATCC 1 cut(s) 1381
BsuRI GGCC 2 cut(s) 556, 1231
BtgZI GCGATG 1 cut(s) 561
BtsCI GGATG 3 cut(s) 266, 337, 1242
BtsI GCAGTG 1 cut(s) 1093
BtsIMutI CAGTG 3 cut(s) 1033, 1093, 1256
Cac8I GCNNGC 3 cut(s) 280, 309, 1268
CaiI CAGNNNCTG 1 cut(s) 407
CfoI GCGC 2 cut(s) 313, 1316
Cfr10I RCCGGY 1 cut(s) 307
Cfr13I GGNCC 3 cut(s) 1012, 1229, 1522
CseI GACGC 1 cut(s) 256
Csp6I GTAC 3 cut(s) 425, 1031, 1409
CspCI CAANNNNNGTGG 2 cut(s) 1547, 1582
CviAII CATG 7 cut(s) 54, 435, 494, 611, 772, 1114, 1514
CviQI GTAC 3 cut(s) 425, 1031, 1409
DdeI CTNAG 3 cut(s) 605, 714, 1419
DinI GGCGCC 1 cut(s) 1315
DpnI GATC 4 cut(s) 48, 321, 472, 522
DpnII GATC 4 cut(s) 46, 319, 470, 520
Eam1104I CTCTTC 3 cut(s) 151, 289, 1353
EarI CTCTTC 3 cut(s) 151, 289, 1353
EciI GGCGGA 5 cut(s) 89, 156, 220, 265, 294
Eco130I CCWWGG 1 cut(s) 1368
Eco24I GRGCYC 1 cut(s) 258
Eco32I GATATC 1 cut(s) 946
Eco47I GGWCC 2 cut(s) 1012, 1522
Eco57I CTGAAG 2 cut(s) 520, 932
Eco88I CYCGRG 2 cut(s) 245, 503
EcoRII CCWGG 2 cut(s) 657, 1309
EcoRV GATATC 1 cut(s) 946
EcoT14I CCWWGG 1 cut(s) 1368
EcoT38I GRGCYC 1 cut(s) 258
EgeI GGCGCC 1 cut(s) 1315
EheI GGCGCC 1 cut(s) 1315
ErhI CCWWGG 1 cut(s) 1368
Esp3I CGTCTC 1 cut(s) 148
FaeI CATG 7 cut(s) 57, 438, 497, 614, 775, 1117, 1517
FalI AAGNNNNNCTT 2 cut(s) 797, 829
FaqI GGGAC 3 cut(s) 185, 608, 1508
FatI CATG 7 cut(s) 53, 434, 493, 610, 771, 1113, 1513
FauI CCCGC 1 cut(s) 287
FauNDI CATATG 1 cut(s) 918
FokI GGATG 3 cut(s) 273, 344, 1229
FriOI GRGCYC 1 cut(s) 258
FspBI CTAG 5 cut(s) 293, 888, 1152, 1278, 1527
GlaI GCGC 2 cut(s) 312, 1315
GsaI CCCAGC 1 cut(s) 301
HaeII RGCGCY 2 cut(s) 314, 1317
HaeIII GGCC 2 cut(s) 556, 1231
HapII CCGG 3 cut(s) 170, 308, 1343
HgaI GACGC 1 cut(s) 256
HhaI GCGC 2 cut(s) 313, 1316
Hin1I GRCGYC 1 cut(s) 1314
Hin1II CATG 7 cut(s) 57, 438, 497, 614, 775, 1117, 1517
Hin6I GCGC 2 cut(s) 311, 1314
HinP1I GCGC 2 cut(s) 311, 1314
HindIII AAGCTT 1 cut(s) 476
HinfI GANTC 4 cut(s) 596, 881, 1460, 1555
HpaII CCGG 3 cut(s) 170, 308, 1343
HphI GGTGA 2 cut(s) 787, 1357
Hpy166II GTNNAC 3 cut(s) 1031, 1033, 1365
Hpy188III TCNNGA 7 cut(s) 247, 503, 505, 528, 888, 1146, 1191
Hpy8I GTNNAC 3 cut(s) 1031, 1033, 1365
Hpy99I CGWCG 2 cut(s) 108, 272
HpyAV CCTTC 5 cut(s) 100, 251, 441, 567, 858
HpyCH4III ACNGT 4 cut(s) 199, 391, 403, 1028
HpyF10VI GCNNNNNNNGC 5 cut(s) 175, 181, 230, 233, 1181
HpyF3I CTNAG 3 cut(s) 605, 714, 1419
Hsp92I GRCGYC 1 cut(s) 1314
Hsp92II CATG 7 cut(s) 57, 438, 497, 614, 775, 1117, 1517
HspAI GCGC 2 cut(s) 311, 1314
KasI GGCGCC 1 cut(s) 1313
KroI GCCGGC 1 cut(s) 307
KroNI GCCGGC 1 cut(s) 309
Kzo9I GATC 4 cut(s) 46, 319, 470, 520
LguI GCTCTTC 1 cut(s) 289
LmnI GCTCC 6 cut(s) 16, 172, 757, 823, 1083, 1447
Lsp1109I GCAGC 7 cut(s) 6, 251, 394, 559, 736, 755, 1563
LweI GCATC 3 cut(s) 39, 251, 964
MaeI CTAG 5 cut(s) 293, 888, 1152, 1278, 1527
MaeIII GTNAC 2 cut(s) 24, 680
MalI GATC 4 cut(s) 48, 321, 472, 522
MbiI CCGCTC 1 cut(s) 282
MboI GATC 4 cut(s) 46, 319, 470, 520
MboII GAAGA 7 cut(s) 138, 276, 552, 665, 876, 1088, 1370
MflI RGATCY 2 cut(s) 46, 520
MhlI GDGCHC 4 cut(s) 258, 396, 1285, 1342
Mly113I GGCGCC 1 cut(s) 1314
MlyI GAGTC 2 cut(s) 590, 1454
MmeI TCCRAC 2 cut(s) 1036, 1039
MreI CGCCGGCG 1 cut(s) 307
MroNI GCCGGC 1 cut(s) 307
MroXI GAANNNNTTC 1 cut(s) 868
MseI TTAA 4 cut(s) 81, 441, 618, 1293
MslI CAYNNNNRTG 1 cut(s) 760
MspI CCGG 3 cut(s) 170, 308, 1343
MspR9I CCNGG 3 cut(s) 659, 1311, 1343
Mva1269I GAATGC 1 cut(s) 1579
MvaI CCWGG 2 cut(s) 659, 1311
MvnI CGCG 1 cut(s) 417
MwoI GCNNNNNNNGC 5 cut(s) 175, 181, 230, 233, 1181
NaeI GCCGGC 1 cut(s) 309
NarI GGCGCC 1 cut(s) 1314
NciI CCSGG 1 cut(s) 1343
NdeI CATATG 1 cut(s) 918
NdeII GATC 4 cut(s) 46, 319, 470, 520
NgoMIV GCCGGC 1 cut(s) 307
NlaIII CATG 7 cut(s) 57, 438, 497, 614, 775, 1117, 1517
NlaIV GGNNCC 8 cut(s) 38, 48, 174, 819, 925, 1315, 1449, 1524
NmuCI GTSAC 2 cut(s) 24, 680
NspI RCATGY 1 cut(s) 1117
PaeR7I CTCGAG 1 cut(s) 503
PciSI GCTCTTC 1 cut(s) 289
PcsI WCGNNNNNNNCGW 1 cut(s) 264
PctI GAATGC 1 cut(s) 1579
PdiI GCCGGC 1 cut(s) 309
PdmI GAANNNNTTC 1 cut(s) 868
PfeI GAWTC 2 cut(s) 881, 1555
PleI GAGTC 2 cut(s) 590, 1454
PluTI GGCGCC 1 cut(s) 1317
PpsI GAGTC 2 cut(s) 590, 1454
Psp6I CCWGG 2 cut(s) 657, 1309
PspFI CCCAGC 1 cut(s) 297
PspGI CCWGG 2 cut(s) 657, 1309
PspN4I GGNNCC 8 cut(s) 38, 48, 174, 819, 925, 1315, 1449, 1524
PspPI GGNCC 3 cut(s) 1012, 1229, 1522
PstNI CAGNNNCTG 1 cut(s) 407
PsuI RGATCY 2 cut(s) 46, 520
RsaI GTAC 3 cut(s) 426, 1032, 1410
RsaNI GTAC 3 cut(s) 425, 1031, 1409
RseI CAYNNNNRTG 1 cut(s) 760
SapI GCTCTTC 1 cut(s) 289
SaqAI TTAA 4 cut(s) 81, 441, 618, 1293
Sau3AI GATC 4 cut(s) 46, 319, 470, 520
Sau96I GGNCC 3 cut(s) 1012, 1229, 1522
SchI GAGTC 2 cut(s) 590, 1454
ScrFI CCNGG 3 cut(s) 659, 1311, 1343
SduI GDGCHC 4 cut(s) 258, 396, 1285, 1342
SfaNI GCATC 3 cut(s) 39, 251, 964
SfcI CTRYAG 1 cut(s) 314
SfoI GGCGCC 1 cut(s) 1315
Sfr274I CTCGAG 1 cut(s) 503
SgrAI CRCCGGYG 1 cut(s) 307
SinI GGWCC 2 cut(s) 1012, 1522
SlaI CTCGAG 1 cut(s) 503
SmiMI CAYNNNNRTG 1 cut(s) 760
SmlI CTYRAG 4 cut(s) 459, 485, 503, 526
SmoI CTYRAG 4 cut(s) 459, 485, 503, 526
SpeI ACTAGT 1 cut(s) 1151
SspDI GGCGCC 1 cut(s) 1313
SspMI CTAG 5 cut(s) 293, 888, 1152, 1278, 1527
StyD4I CCNGG 3 cut(s) 657, 1309, 1341
StyI CCWWGG 1 cut(s) 1368
TaaI ACNGT 4 cut(s) 199, 391, 403, 1028
TaqI TCGA 3 cut(s) 504, 1192, 1207
TatI WGTACW 1 cut(s) 1030
TauI GCSGC 8 cut(s) 178, 181, 184, 227, 236, 353, 420, 572
TfiI GAWTC 2 cut(s) 881, 1555
Tru1I TTAA 4 cut(s) 81, 441, 618, 1293
Tru9I TTAA 4 cut(s) 81, 441, 618, 1293
TscAI CASTG 3 cut(s) 1033, 1093, 1256
TseFI GTSAC 2 cut(s) 24, 680
TseI GCWGC 7 cut(s) 19, 264, 407, 572, 749, 768, 1576
Tsp45I GTSAC 2 cut(s) 24, 680
TspDTI ATGAA 1 cut(s) 423
TspGWI ACGGA 1 cut(s) 344
TspRI CASTG 3 cut(s) 1033, 1093, 1256
VpaK11BI GGWCC 2 cut(s) 1012, 1522
XapI RAATTY 3 cut(s) 797, 1351, 1561
XbaI TCTAGA 1 cut(s) 887
XceI RCATGY 1 cut(s) 1117
XhoI CTCGAG 1 cut(s) 503
XmnI GAANNNNTTC 1 cut(s) 868
XspI CTAG 5 cut(s) 293, 888, 1152, 1278, 1527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.