RchiOBHm_Chr1g0332251

Tumour-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0008622
Physical Location & Seq
Forward (+)
23416794 .. 23432677
15884 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1971 bp
ATGCTGCTGCTGCTGCTTTGTTTGAATTGGGTTGTTTCAGATATAGATAGAGAGCAGCAGGAGAAGAAGAGAGAGGACGACATGGATCCGGAGCAGACATTCATACGCGTACAAGAGCGCTTCTCTCAGATCCTGACGCCAAAAGTGAGAGCTGCTTTGGAGTATATCTACCTTTTCATCGCGATCACTCTCTTCTGTATTCTCGTTGTTATGCATGCCAATTACGTTCAGCAGCCTGGCTGTTCAAGTGAGCTTCCTGGAGTTGAAACAGCAGACGCAGAAATTATTCATGTTAAGATTTCCAGTGCAGGCTTGTGGTCGCAGAATGAGTCAGAATTCACCAATGGGATAAATGATGTCCCCGAGACGAAATTTGTGGTGGATGAATTAGAATTTGCCAATGTAAATGGGGATGAGATTCTGGATCATCAGGCAGATAGCTGTATGCCAAATGTTGATGATGCGGTTATGAAAACTGAAATAGAGGAGTCACGTAGTAGTTTTCCTTTATCTGCAAAAGAGACATTCAAAGCAGCACTCTTTCATTTTAGCAACAAGTGGCACAGGCGTCTATCATTCCTTTGGAAGCATGGAACACATATTGTTGGAAGTTTGTGGAACATTGCAGGCATACATTTGGATCTTGATATTCCAAAGTGGCTGCATATACTTCGATTGGACAGGCTTAACTCGTATGCAGTGCAGTGGCTTGAGAACAGAAGCAAAACTTTTGAACCAACTTACTTATACACTGTGGAAAAGGGTTATTTCTTACTGCCTGAAAGTGCAAGAGCTCAGCATAATATTCGTACTGTAAACATAAGCATATCAGCTCGACATTCCTGTTTCGGAAACAGGTGGCAGCAGCTACTGATTAACAGATTTGTTGGGTACGATACTATTTTGATAAACAGTTTACTGAGTTCTCCTGGTCAAGGTTATCTTTATAATTTTCAAACCAAGGAGTTCTTTAATCTTAGTTATGCACATGAACCGCCAGAGGGTCCGGCAAGATTTGGAGACTACCTCGTGACAAAGTGTGGCGTTCTTATGATGTCTCTATTTGTGTTCTTTACAACCACTATGTCTGTGTCATTTACTTTGAGAGAGACGCAGACTAGGATGCTGAAGTTTACAGTGCAGCTTCAACACCATGCTCGTCATCAGCTTCCAACATTTCAGTTGATTTTTGTGCATGTAATTGAATCACTTGTCTTTGTCCCGATTATGATTGGCATATTGTTTTTTCTGTTCGAGTTTTACGATGATCAACTATTGGCTTTCATGGTCCTAATTCTTGTCTGGTTGAGTGAACTATTTACCCTGATCAGTGTTCGCACGCCCATATCAATGAAGTTCTTTCCCCGCTTCTTTCTGCTCTACTTCCTGGTTTTTCACATCTATTTCTTTTCCTATGCTTATGGTTTTTCCTATTTGGCTCTTTCTACGGCTGCAGCATTTATGCAGCATCTCATTCTATACTTCTGGAACCGTTTTGAGGTACCAACTCTACAAAGGTTTATTCAAAATCGAAGATCACAACTCCAACAACACCCAGATTTCCACATTACTTCCTCCACATTCCTTGCCTCAACTTTGCATATCACAAGATTAAACACAAGAAATCCTGGTCCAGTCAATTCTGACACAGTCTCTGGGCCTGGGCTGAGATCTGGATCCAATCCAGCAGTGCCTTCAAATGGAGCTGAAGCTCCTGGCTTTCATGAACGATCAGGCAATGAGAACCCAGTGCAAAACCCTCTTCAGGTTCCAGGCCAAACTGACCTGAATCAAGCAGAGAATGGCCCAAACCCCAGCACTATGAATTCTTTCAGTTCACTTTTGTTGTGGATATTAGGAGGAGCTTCCTCTGAAGGCCTCAACTCATTTCTTTCTATGTTCAGAGATGTCCGAGACCAAGGACAAGCTTATGCTGAATCTCCCAGGCAAGAAAATCAGGATGGAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Membralin

Protein Analysis

656

Amino Acids

75.32

Weight (kDa)

5.94

Isoelectric Point (pI)

53.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Membralin PF09746 34 - 451 1.6e-23 Tumour-associated protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 948
Acc65I GGTACC 1 cut(s) 1501
AccB1I GGYRCC 1 cut(s) 1501
AccII CGCG 2 cut(s) 108, 182
AccIII TCCGGA 1 cut(s) 88
AciI CCGC 3 cut(s) 464, 995, 1366
AclWI GGATC 7 cut(s) 80, 93, 124, 432, 648, 1671, 1684
AcsI RAATTY 4 cut(s) 335, 371, 392, 1825
AcuI CTGAAG 4 cut(s) 1148, 1728, 1748, 1893
AcyI GRCGYC 2 cut(s) 137, 568
AfaI GTAC 4 cut(s) 111, 811, 893, 1503
AfeI AGCGCT 1 cut(s) 119
AfiI CCNNNNNNNGG 5 cut(s) 935, 1001, 1498, 1700, 1765
AflIII ACRYGT 1 cut(s) 106
AjnI CCWGG 9 cut(s) 235, 256, 928, 1386, 1627, 1660, 1714, 1771, 1943
Alw21I GWGCWC 1 cut(s) 796
Alw26I GTCTC 7 cut(s) 359, 515, 1014, 1062, 1103, 1657, 1908
AlwI GGATC 7 cut(s) 80, 93, 124, 432, 648, 1671, 1684
AlwNI CAGNNNCTG 3 cut(s) 133, 871, 1655
Ama87I CYCGRG 1 cut(s) 362
Aor13HI TCCGGA 1 cut(s) 88
Aor51HI AGCGCT 1 cut(s) 119
AoxI GGCC 4 cut(s) 1658, 1774, 1804, 1876
ApoI RAATTY 4 cut(s) 335, 371, 392, 1825
Asp700I GAANNNNTTC 2 cut(s) 285, 1829
Asp718I GGTACC 1 cut(s) 1501
AspLEI GCGC 1 cut(s) 120
AspS9I GGNCC 5 cut(s) 1004, 1288, 1631, 1658, 1805
AsuHPI GGTGA 1 cut(s) 331
AvaI CYCGRG 1 cut(s) 362
AvaII GGWCC 3 cut(s) 1004, 1288, 1631
BamHI GGATCC 2 cut(s) 85, 1676
BanI GGYRCC 1 cut(s) 1501
BanII GRGCYC 1 cut(s) 796
BauI CACGAG 1 cut(s) 1028
Bbv12I GWGCWC 1 cut(s) 796
BccI CCATC 1 cut(s) 1955
BceAI ACGGC 1 cut(s) 1464
BcgI CGANNNNNNTGC 4 cut(s) 653, 687, 788, 822
BciT130I CCWGG 9 cut(s) 237, 258, 930, 1388, 1629, 1662, 1716, 1773, 1945
BclI TGATCA 2 cut(s) 1267, 1326
BcoDI GTCTC 7 cut(s) 359, 515, 1014, 1062, 1103, 1657, 1908
BfaI CTAG 1 cut(s) 1119
BfmI CTRYAG 1 cut(s) 1452
BfoI RGCGCY 1 cut(s) 121
BglII AGATCT 1 cut(s) 1670
BlpI GCTNAGC 1 cut(s) 795
Bme1390I CCNGG 9 cut(s) 237, 258, 930, 1388, 1629, 1662, 1716, 1773, 1945
Bme18I GGWCC 3 cut(s) 1004, 1288, 1631
BmeT110I CYCGRG 1 cut(s) 362
BmgT120I GGNCC 5 cut(s) 1004, 1288, 1631, 1658, 1805
BmiI GGNNCC 6 cut(s) 87, 1005, 1490, 1503, 1678, 1770
BmrFI CCNGG 9 cut(s) 237, 258, 930, 1388, 1629, 1662, 1716, 1773, 1945
BmrI ACTGGG 1 cut(s) 1742
BmsI GCATC 3 cut(s) 451, 1113, 1477
BmuI ACTGGG 1 cut(s) 1742
BplI GAGNNNNNCTC 4 cut(s) 107, 139, 1011, 1043
BpmI CTGGAG 1 cut(s) 279
Bpu1102I GCTNAGC 1 cut(s) 795
BpuEI CTTGAG 1 cut(s) 731
BsaAI YACGTR 1 cut(s) 494
BsaBI GATNNNNATC 1 cut(s) 1675
BsaHI GRCGYC 2 cut(s) 137, 568
BsaI GGTCTC 1 cut(s) 1908
BsaJI CCNNGG 4 cut(s) 960, 1661, 1918, 1943
BsaWI WCCGGW 1 cut(s) 88
Bsc4I CCNNNNNNNGG 5 cut(s) 935, 1001, 1498, 1700, 1765
Bse1I ACTGG 3 cut(s) 303, 1634, 1748
Bse3DI GCAATG 2 cut(s) 621, 1744
Bse8I GATNNNNATC 1 cut(s) 1675
BseAI TCCGGA 1 cut(s) 88
BseBI CCWGG 9 cut(s) 237, 258, 930, 1388, 1629, 1662, 1716, 1773, 1945
BseDI CCNNGG 4 cut(s) 960, 1661, 1918, 1943
BseGI GGATG 4 cut(s) 388, 418, 1128, 1966
BseJI GATNNNNATC 1 cut(s) 1675
BseLI CCNNNNNNNGG 5 cut(s) 935, 1001, 1498, 1700, 1765
BseMI GCAATG 2 cut(s) 621, 1744
BseMII CTCAG 4 cut(s) 140, 809, 911, 1658
BseNI ACTGG 3 cut(s) 303, 1634, 1748
BseRI GAGGAG 2 cut(s) 500, 1875
BseYI CCCAGC 1 cut(s) 1814
BsgI GTGCAG 3 cut(s) 327, 722, 1160
Bsh1236I CGCG 2 cut(s) 108, 182
BshFI GGCC 4 cut(s) 1660, 1776, 1806, 1878
BshNI GGYRCC 1 cut(s) 1501
BsiHKAI GWGCWC 1 cut(s) 796
BsiHKCI CYCGRG 1 cut(s) 362
BsiSI CCGG 2 cut(s) 89, 1007
BslFI GGGAC 2 cut(s) 344, 1205
BslI CCNNNNNNNGG 5 cut(s) 935, 1001, 1498, 1700, 1765
BsmAI GTCTC 7 cut(s) 359, 515, 1014, 1062, 1103, 1657, 1908
BsmBI CGTCTC 2 cut(s) 359, 1103
BsmFI GGGAC 2 cut(s) 344, 1205
BsnI GGCC 4 cut(s) 1660, 1776, 1806, 1878
Bso31I GGTCTC 1 cut(s) 1908
BsoBI CYCGRG 1 cut(s) 362
Bsp1286I GDGCHC 1 cut(s) 796
Bsp13I TCCGGA 1 cut(s) 88
Bsp1720I GCTNAGC 1 cut(s) 795
Bsp68I TCGCGA 1 cut(s) 182
BspACI CCGC 3 cut(s) 464, 995, 1366
BspANI GGCC 4 cut(s) 1660, 1776, 1806, 1878
BspCNI CTCAG 4 cut(s) 139, 808, 912, 1659
BspEI TCCGGA 1 cut(s) 88
BspFNI CGCG 2 cut(s) 108, 182
BspHI TCATGA 1 cut(s) 1723
BspLI GGNNCC 6 cut(s) 87, 1005, 1490, 1503, 1678, 1770
BspMAI CTGCAG 1 cut(s) 1456
BspPI GGATC 7 cut(s) 80, 93, 124, 432, 648, 1671, 1684
BspT107I GGYRCC 1 cut(s) 1501
BspTNI GGTCTC 1 cut(s) 1908
BsrDI GCAATG 2 cut(s) 621, 1744
BsrI ACTGG 3 cut(s) 303, 1634, 1748
BssECI CCNNGG 4 cut(s) 960, 1661, 1918, 1943
BssNI GRCGYC 2 cut(s) 137, 568
BssSI CACGAG 1 cut(s) 1028
BssT1I CCWWGG 2 cut(s) 960, 1918
Bst2BI CACGAG 1 cut(s) 1028
Bst2UI CCWGG 9 cut(s) 237, 258, 930, 1388, 1629, 1662, 1716, 1773, 1945
Bst4CI ACNGT 6 cut(s) 754, 814, 914, 1138, 1493, 1651
Bst6I CTCTTC 3 cut(s) 62, 197, 1767
BstACI GRCGYC 2 cut(s) 137, 568
BstBAI YACGTR 1 cut(s) 494
BstC8I GCNNGC 4 cut(s) 216, 310, 628, 1340
BstDEI CTNAG 5 cut(s) 126, 795, 920, 977, 1667
BstENI CCTNNNNNAGG 1 cut(s) 933
BstF5I GGATG 4 cut(s) 388, 418, 1128, 1966
BstFNI CGCG 2 cut(s) 108, 182
BstH2I RGCGCY 1 cut(s) 121
BstHHI GCGC 1 cut(s) 120
BstMAI GTCTC 7 cut(s) 359, 515, 1014, 1062, 1103, 1657, 1908
BstMWI GCNNNNNNNGC 2 cut(s) 10, 13
BstNI CCWGG 9 cut(s) 237, 258, 930, 1388, 1629, 1662, 1716, 1773, 1945
BstNSI RCATGY 2 cut(s) 218, 1199
BstSCI CCNGG 9 cut(s) 235, 256, 928, 1386, 1627, 1660, 1714, 1771, 1943
BstSFI CTRYAG 1 cut(s) 1452
BstUI CGCG 2 cut(s) 108, 182
BstX2I RGATCY 5 cut(s) 85, 129, 640, 1670, 1676
BstYI RGATCY 5 cut(s) 85, 129, 640, 1670, 1676
BsuRI GGCC 4 cut(s) 1660, 1776, 1806, 1878
BtgZI GCGATG 1 cut(s) 163
BtsCI GGATG 4 cut(s) 388, 418, 1128, 1966
BtsI GCAGTG 3 cut(s) 705, 710, 1695
BtsIMutI CAGTG 8 cut(s) 310, 705, 710, 750, 1143, 1336, 1695, 1755
BtuMI TCGCGA 1 cut(s) 182
Cac8I GCNNGC 4 cut(s) 216, 310, 628, 1340
CaiI CAGNNNCTG 3 cut(s) 133, 871, 1655
CciI TCATGA 1 cut(s) 1723
CfoI GCGC 1 cut(s) 120
Cfr13I GGNCC 5 cut(s) 1004, 1288, 1631, 1658, 1805
CseI GACGC 4 cut(s) 145, 284, 557, 1120
Csp6I GTAC 4 cut(s) 110, 810, 892, 1502
CspCI CAANNNNNGTGG 2 cut(s) 1567, 1602
CviAII CATG 9 cut(s) 82, 215, 290, 590, 989, 1154, 1196, 1285, 1724
CviQI GTAC 4 cut(s) 110, 810, 892, 1502
DdeI CTNAG 5 cut(s) 126, 795, 920, 977, 1667
Eam1104I CTCTTC 3 cut(s) 62, 197, 1767
EarI CTCTTC 3 cut(s) 62, 197, 1767
Ecl136II GAGCTC 1 cut(s) 794
Eco130I CCWWGG 2 cut(s) 960, 1918
Eco147I AGGCCT 1 cut(s) 1878
Eco24I GRGCYC 1 cut(s) 796
Eco31I GGTCTC 1 cut(s) 1908
Eco47I GGWCC 3 cut(s) 1004, 1288, 1631
Eco47III AGCGCT 1 cut(s) 119
Eco53kI GAGCTC 1 cut(s) 794
Eco57I CTGAAG 4 cut(s) 1148, 1728, 1748, 1893
Eco88I CYCGRG 1 cut(s) 362
EcoICRI GAGCTC 1 cut(s) 794
EcoNI CCTNNNNNAGG 1 cut(s) 933
EcoRI GAATTC 2 cut(s) 335, 1825
EcoRII CCWGG 9 cut(s) 235, 256, 928, 1386, 1627, 1660, 1714, 1771, 1943
EcoT14I CCWWGG 2 cut(s) 960, 1918
EcoT22I ATGCAT 1 cut(s) 216
EcoT38I GRGCYC 1 cut(s) 796
ErhI CCWWGG 2 cut(s) 960, 1918
Esp3I CGTCTC 2 cut(s) 359, 1103
FaeI CATG 9 cut(s) 85, 218, 293, 593, 992, 1157, 1199, 1288, 1727
FalI AAGNNNNNCTT 6 cut(s) 712, 744, 927, 959, 953, 985
FaqI GGGAC 2 cut(s) 344, 1205
FatI CATG 9 cut(s) 81, 214, 289, 589, 988, 1153, 1195, 1284, 1723
FauI CCCGC 1 cut(s) 1373
FbaI TGATCA 2 cut(s) 1267, 1326
FokI GGATG 3 cut(s) 395, 425, 1135
FriOI GRGCYC 1 cut(s) 796
FspBI CTAG 1 cut(s) 1119
GlaI GCGC 1 cut(s) 119
GsaI CCCAGC 1 cut(s) 1818
GsuI CTGGAG 1 cut(s) 279
HaeII RGCGCY 1 cut(s) 121
HaeIII GGCC 4 cut(s) 1660, 1776, 1806, 1878
HapII CCGG 2 cut(s) 89, 1007
HgaI GACGC 4 cut(s) 145, 284, 557, 1120
HhaI GCGC 1 cut(s) 120
Hin1I GRCGYC 2 cut(s) 137, 568
Hin1II CATG 9 cut(s) 85, 218, 293, 593, 992, 1157, 1199, 1288, 1727
Hin6I GCGC 1 cut(s) 118
HinP1I GCGC 1 cut(s) 118
HindIII AAGCTT 1 cut(s) 1926
HinfI GANTC 6 cut(s) 329, 418, 488, 1205, 1789, 1937
HpaII CCGG 2 cut(s) 89, 1007
HphI GGTGA 1 cut(s) 331
Hpy166II GTNNAC 5 cut(s) 817, 917, 1134, 1313, 1838
Hpy188I TCNGA 8 cut(s) 40, 129, 334, 851, 1645, 1873, 1904, 1913
Hpy8I GTNNAC 5 cut(s) 817, 917, 1134, 1313, 1838
HpyAV CCTTC 2 cut(s) 1704, 1868
HpyCH4III ACNGT 6 cut(s) 754, 814, 914, 1138, 1493, 1651
HpyCH4IV ACGT 2 cut(s) 225, 493
HpyF10VI GCNNNNNNNGC 2 cut(s) 10, 13
HpyF3I CTNAG 5 cut(s) 126, 795, 920, 977, 1667
HpySE526I ACGT 2 cut(s) 225, 493
Hsp92I GRCGYC 2 cut(s) 137, 568
Hsp92II CATG 9 cut(s) 85, 218, 293, 593, 992, 1157, 1199, 1288, 1727
HspAI GCGC 1 cut(s) 118
Kpn2I TCCGGA 1 cut(s) 88
KpnI GGTACC 1 cut(s) 1505
Ksp22I TGATCA 2 cut(s) 1267, 1326
LmnI GCTCC 4 cut(s) 91, 1703, 1717, 1862
LweI GCATC 3 cut(s) 451, 1113, 1477
MaeI CTAG 1 cut(s) 1119
MaeII ACGT 2 cut(s) 225, 493
MaeIII GTNAC 2 cut(s) 489, 1030
MboII GAAGA 5 cut(s) 76, 79, 184, 1545, 1754
MflI RGATCY 5 cut(s) 85, 129, 640, 1670, 1676
MhlI GDGCHC 1 cut(s) 796
MluI ACGCGT 1 cut(s) 106
MlyI GAGTC 2 cut(s) 338, 497
MmeI TCCRAC 3 cut(s) 586, 1196, 1570
Mph1103I ATGCAT 1 cut(s) 216
MroI TCCGGA 1 cut(s) 88
MroXI GAANNNNTTC 2 cut(s) 285, 1829
MseI TTAA 5 cut(s) 294, 687, 876, 972, 1613
MslI CAYNNNNRTG 1 cut(s) 1349
MspI CCGG 2 cut(s) 89, 1007
MspR9I CCNGG 9 cut(s) 237, 258, 930, 1388, 1629, 1662, 1716, 1773, 1945
MvaI CCWGG 9 cut(s) 237, 258, 930, 1388, 1629, 1662, 1716, 1773, 1945
MvnI CGCG 2 cut(s) 108, 182
MwoI GCNNNNNNNGC 2 cut(s) 10, 13
NlaIII CATG 9 cut(s) 85, 218, 293, 593, 992, 1157, 1199, 1288, 1727
NlaIV GGNNCC 6 cut(s) 87, 1005, 1490, 1503, 1678, 1770
NmuCI GTSAC 2 cut(s) 489, 1030
NruI TCGCGA 1 cut(s) 182
NsiI ATGCAT 1 cut(s) 216
NspI RCATGY 2 cut(s) 218, 1199
PaeI GCATGC 1 cut(s) 218
PagI TCATGA 1 cut(s) 1723
PceI AGGCCT 1 cut(s) 1878
PcsI WCGNNNNNNNCGW 1 cut(s) 1260
PdmI GAANNNNTTC 2 cut(s) 285, 1829
PfeI GAWTC 4 cut(s) 418, 1205, 1789, 1937
PflFI GACNNNGTC 1 cut(s) 1649
PfoI TCCNGGA 1 cut(s) 256
PleI GAGTC 2 cut(s) 337, 496
PpsI GAGTC 2 cut(s) 337, 496
Ppu21I YACGTR 1 cut(s) 494
PsiI TTATAA 1 cut(s) 948
Psp124BI GAGCTC 1 cut(s) 796
Psp6I CCWGG 9 cut(s) 235, 256, 928, 1386, 1627, 1660, 1714, 1771, 1943
PspFI CCCAGC 1 cut(s) 1814
PspGI CCWGG 9 cut(s) 235, 256, 928, 1386, 1627, 1660, 1714, 1771, 1943
PspN4I GGNNCC 6 cut(s) 87, 1005, 1490, 1503, 1678, 1770
PspPI GGNCC 5 cut(s) 1004, 1288, 1631, 1658, 1805
PstI CTGCAG 1 cut(s) 1456
PstNI CAGNNNCTG 3 cut(s) 133, 871, 1655
PsuI RGATCY 5 cut(s) 85, 129, 640, 1670, 1676
PsyI GACNNNGTC 1 cut(s) 1649
RruI TCGCGA 1 cut(s) 182
RsaI GTAC 4 cut(s) 111, 811, 893, 1503
RsaNI GTAC 4 cut(s) 110, 810, 892, 1502
RseI CAYNNNNRTG 1 cut(s) 1349
SacI GAGCTC 1 cut(s) 796
SaqAI TTAA 5 cut(s) 294, 687, 876, 972, 1613
Sau96I GGNCC 5 cut(s) 1004, 1288, 1631, 1658, 1805
SchI GAGTC 2 cut(s) 338, 497
ScrFI CCNGG 9 cut(s) 237, 258, 930, 1388, 1629, 1662, 1716, 1773, 1945
SduI GDGCHC 1 cut(s) 796
SfaNI GCATC 3 cut(s) 451, 1113, 1477
SfcI CTRYAG 1 cut(s) 1452
SinI GGWCC 3 cut(s) 1004, 1288, 1631
SmiMI CAYNNNNRTG 1 cut(s) 1349
SmlI CTYRAG 1 cut(s) 710
SmoI CTYRAG 1 cut(s) 710
SphI GCATGC 1 cut(s) 218
SseBI AGGCCT 1 cut(s) 1878
SsiI CCGC 3 cut(s) 464, 995, 1366
SspI AATATT 1 cut(s) 805
SspMI CTAG 1 cut(s) 1119
SstI GAGCTC 1 cut(s) 796
StuI AGGCCT 1 cut(s) 1878
StyD4I CCNGG 9 cut(s) 235, 256, 928, 1386, 1627, 1660, 1714, 1771, 1943
StyI CCWWGG 2 cut(s) 960, 1918
TaaI ACNGT 6 cut(s) 754, 814, 914, 1138, 1493, 1651
TaiI ACGT 2 cut(s) 228, 496
TaqI TCGA 4 cut(s) 673, 835, 1254, 1531
TfiI GAWTC 4 cut(s) 418, 1205, 1789, 1937
Tru1I TTAA 5 cut(s) 294, 687, 876, 972, 1613
Tru9I TTAA 5 cut(s) 294, 687, 876, 972, 1613
TscAI CASTG 8 cut(s) 310, 705, 710, 757, 1143, 1336, 1695, 1755
TseFI GTSAC 2 cut(s) 489, 1030
Tsp45I GTSAC 2 cut(s) 489, 1030
TspRI CASTG 8 cut(s) 310, 705, 710, 757, 1143, 1336, 1695, 1755
Tth111I GACNNNGTC 1 cut(s) 1649
VpaK11BI GGWCC 3 cut(s) 1004, 1288, 1631
XagI CCTNNNNNAGG 1 cut(s) 933
XapI RAATTY 4 cut(s) 335, 371, 392, 1825
XceI RCATGY 2 cut(s) 218, 1199
XmnI GAANNNNTTC 2 cut(s) 285, 1829
XspI CTAG 1 cut(s) 1119
Zsp2I ATGCAT 1 cut(s) 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.