Rroxscaffold_3G00237580

Tumour-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0008622
Physical Location & Seq
Reverse (-)
25255545 .. 25264911
9367 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00237580.1

Sequence Viewer

Length: 1809 bp
ATGGATCCGGAGCAGACCTTCATCCGCGTACAAGAGCGCTTCTCTCAGATCCTGACGCCTAAAGTGAGAGCTTCTTTGGAGTATATCTACCTTTTCATCGCCATCACTCTCTTCTGTATTCTCGTTGTTATGCACGCCAATTACGTTCAGCAGGTGTCTGAGTTTGAACATAACTTGAATTCTGATATCATGGTGCCGGGATATGAGTGTGAGCCTGGCTGTTCAAGTGAGCTTCCTGGGGTTGAAACAGCAGACGCACAAATCATTCATGTTAAGATTTCCAGTGCAGGCTTGTGGTCACAGAATGAGTCAGAATTCACCAATGTGATAAATGATGTCCCCGAGACGAAATTTGTGATGGATAAATTAGAATTTGCCAATGTAAATGGGGATGAGATTCTGGATCATCAGGCAGATAGCTGTATGCCAAATGTTGATGATGCGGTTATGAAAACTGAAATAGAGGAGTCACGTAGTAGTTTTCCTTTATCTGCGAAAGAGACATTCAAAGCAGCACTCTTTCATTTTAGCAACAAGTGGCACAGGCGTCTATCATTCCTCTGGAAGCATGGAACACATATTGTTGGAAGATTGTGGAACATTGCAGGCATACATTTGGATCTTGATATTCCAAAGTGGCTGCATATACTTCGATTGGACAGGCTTAACTCGTATGCAGTGCAGTGGCTTGAGAACAGAAGCAAAACTTTTGAACCAACTTACTTATACACTATGGAAAAGGGTTATTTCTTATTGCCTGAAAGTGCAAGAGCTCAGCATAATATTCGTACTGTAAACATAAGCATATCAGCTCGACATTCCTGTTTTGGAAACAGGTGGCAGCAGCTACTCATTAACAGATTTGTTGGGTACGATACTATTTTGATAAACAGTTTACTGAGTTCTCCTGGTCAAGGTTATCTTTATAATTTTCAAACAAAGGAGTTCTTTAATCTTAGTTATGCACACGAACCACCAGAGGGTCCGGCAAGATTTGGAGACTACCTTGTGACAAAGTGTGGCGTTCTTATGATGTCTCTATTTGTGTTCTTTACAACCACTATGTCTGTGTCATTTACTTTAAGAGAGACGCAGACTCGGATGCTGAAGTTCACAGTGCAGCTTCAACACCATGCTCGTCATCAGCTTCCGACATTTCAGTTGATTTTTGTGCATGTAATTGAATCACTTGTCTTTGTCCCGTGTTCGCACGCCCATATCAATGAAGTTCTTTCCCCGCTTCTTTCTGCTCTACTTTCTGGTTTTTCCTATTTGGCTCTTTCTACAGCTGCAGCATTTATGCAGCATCTCATTCTATACTTCTGGAACCGTTTTGAGGTACCAACTCTACAAAGGTTTATTCAAAATCGAAGATCACAACTCCAACAACACCCAGATTTCCACATCACTTCCTCCACATTCCTTGCCTCAACTTTGCATATCACAAGATTAAACACAAGAAATCCTGGTCCGGTCAATTCTGACACAGTCTCTGGCCCTGGGCTGAGATCTGGATCCAATCCAGCGGTGCCTTCAAATGGAGCTGAAGCTCCTGGCTTTCATGAACGATCAGGCAATGAGAACCCAGTGCAAAACTCTCTTCAGGTTCCAGGCCAAACTGACCTGAATCAAGCAGAGAATGGTCCAAACCCCAGCACTATGAATTCTTTCAGTTCACTATTGTTGTGGATATTAGGAGGAGCTTCCTCTGAAGGCCTCAGCTCATTTCTTTCTATGTTCAGAGATGTCCGAGACCAAGGACAAGCTTATGCTGAATCTCCCAGGCAAGAAAATCAGGATGGAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Membralin

Protein Analysis

602

Amino Acids

68.32

Weight (kDa)

6.11

Isoelectric Point (pI)

55.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Membralin PF09746 243 - 375 4.9e-11 Tumour-associated protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 927
AarI CACCTGC 1 cut(s) 142
Acc36I ACCTGC 1 cut(s) 142
Acc65I GGTACC 1 cut(s) 1339
AccB1I GGYRCC 3 cut(s) 193, 1339, 1528
AccII CGCG 1 cut(s) 27
AccIII TCCGGA 1 cut(s) 7
AciI CCGC 4 cut(s) 25, 443, 1238, 1526
AclWI GGATC 6 cut(s) 12, 43, 411, 627, 1509, 1522
AcsI RAATTY 5 cut(s) 178, 314, 350, 371, 1663
AcuI CTGAAG 4 cut(s) 1127, 1566, 1586, 1731
AcyI GRCGYC 2 cut(s) 56, 547
AfaI GTAC 4 cut(s) 30, 790, 872, 1341
AfeI AGCGCT 1 cut(s) 38
AfiI CCNNNNNNNGG 4 cut(s) 914, 980, 1336, 1538
AjnI CCWGG 8 cut(s) 214, 235, 907, 1465, 1498, 1552, 1609, 1781
AleI CACNNNNGTG 1 cut(s) 323
Alw21I GWGCWC 1 cut(s) 775
Alw26I GTCTC 7 cut(s) 338, 494, 993, 1041, 1082, 1495, 1746
AlwI GGATC 6 cut(s) 12, 43, 411, 627, 1509, 1522
AlwNI CAGNNNCTG 2 cut(s) 52, 1493
Ama87I CYCGRG 1 cut(s) 341
Aor13HI TCCGGA 1 cut(s) 7
Aor51HI AGCGCT 1 cut(s) 38
AoxI GGCC 3 cut(s) 1495, 1612, 1714
ApeKI GCWGC 8 cut(s) 512, 640, 841, 844, 1120, 1289, 1292, 1303
ApoI RAATTY 5 cut(s) 178, 314, 350, 371, 1663
Asp700I GAANNNNTTC 1 cut(s) 1667
Asp718I GGTACC 1 cut(s) 1339
AspLEI GCGC 1 cut(s) 39
AspS9I GGNCC 4 cut(s) 983, 1469, 1496, 1643
AsuC2I CCSGG 1 cut(s) 198
AsuHPI GGTGA 1 cut(s) 310
AvaI CYCGRG 1 cut(s) 341
AvaII GGWCC 3 cut(s) 983, 1469, 1643
BamHI GGATCC 2 cut(s) 4, 1514
BanI GGYRCC 3 cut(s) 193, 1339, 1528
BanII GRGCYC 1 cut(s) 775
Bbv12I GWGCWC 1 cut(s) 775
BbvCI CCTCAGC 1 cut(s) 1718
BbvI GCAGC 8 cut(s) 524, 627, 853, 856, 1132, 1276, 1304, 1315
BccI CCATC 3 cut(s) 110, 352, 1793
BcgI CGANNNNNNTGC 4 cut(s) 632, 666, 767, 801
BciT130I CCWGG 8 cut(s) 216, 237, 909, 1467, 1500, 1554, 1611, 1783
BcnI CCSGG 1 cut(s) 198
BcoDI GTCTC 7 cut(s) 338, 494, 993, 1041, 1082, 1495, 1746
BfmI CTRYAG 2 cut(s) 1284, 1290
BfoI RGCGCY 1 cut(s) 40
BfuAI ACCTGC 1 cut(s) 142
BglII AGATCT 1 cut(s) 1508
BisI GCNGC 8 cut(s) 513, 641, 842, 845, 1121, 1290, 1293, 1304
BlpI GCTNAGC 1 cut(s) 774
BlsI GCNGC 8 cut(s) 514, 642, 843, 846, 1122, 1291, 1294, 1305
Bme1390I CCNGG 9 cut(s) 198, 216, 237, 909, 1467, 1500, 1554, 1611, 1783
Bme18I GGWCC 3 cut(s) 983, 1469, 1643
BmeT110I CYCGRG 1 cut(s) 341
BmgT120I GGNCC 4 cut(s) 983, 1469, 1496, 1643
BmiI GGNNCC 8 cut(s) 6, 195, 984, 1328, 1341, 1516, 1530, 1608
BmrFI CCNGG 9 cut(s) 198, 216, 237, 909, 1467, 1500, 1554, 1611, 1783
BmrI ACTGGG 1 cut(s) 1580
BmsI GCATC 3 cut(s) 430, 1092, 1315
BmuI ACTGGG 1 cut(s) 1580
BplI GAGNNNNNCTC 2 cut(s) 26, 58
Bpu10I CCTNAGC 1 cut(s) 1718
Bpu1102I GCTNAGC 1 cut(s) 774
BpuEI CTTGAG 1 cut(s) 710
BpuMI CCSGG 1 cut(s) 198
BsaAI YACGTR 1 cut(s) 473
BsaBI GATNNNNATC 1 cut(s) 1513
BsaHI GRCGYC 2 cut(s) 56, 547
BsaI GGTCTC 1 cut(s) 1746
BsaJI CCNNGG 5 cut(s) 236, 1498, 1499, 1756, 1781
BsaWI WCCGGW 2 cut(s) 7, 1471
Bsc4I CCNNNNNNNGG 4 cut(s) 914, 980, 1336, 1538
Bse1I ACTGG 2 cut(s) 282, 1586
Bse3DI GCAATG 2 cut(s) 600, 1582
Bse8I GATNNNNATC 1 cut(s) 1513
BseAI TCCGGA 1 cut(s) 7
BseBI CCWGG 8 cut(s) 216, 237, 909, 1467, 1500, 1554, 1611, 1783
BseDI CCNNGG 5 cut(s) 236, 1498, 1499, 1756, 1781
BseGI GGATG 4 cut(s) 21, 397, 1107, 1804
BseJI GATNNNNATC 1 cut(s) 1513
BseLI CCNNNNNNNGG 4 cut(s) 914, 980, 1336, 1538
BseMI GCAATG 2 cut(s) 600, 1582
BseMII CTCAG 6 cut(s) 59, 150, 788, 890, 1496, 1732
BseNI ACTGG 2 cut(s) 282, 1586
BseRI GAGGAG 2 cut(s) 479, 1713
BseXI GCAGC 8 cut(s) 524, 627, 853, 856, 1132, 1276, 1304, 1315
BseYI CCCAGC 1 cut(s) 1652
BsgI GTGCAG 3 cut(s) 306, 701, 1139
Bsh1236I CGCG 1 cut(s) 27
BshFI GGCC 3 cut(s) 1497, 1614, 1716
BshNI GGYRCC 3 cut(s) 193, 1339, 1528
BsiHKAI GWGCWC 1 cut(s) 775
BsiHKCI CYCGRG 1 cut(s) 341
BsiSI CCGG 4 cut(s) 8, 197, 986, 1472
BslFI GGGAC 2 cut(s) 323, 1184
BslI CCNNNNNNNGG 4 cut(s) 914, 980, 1336, 1538
BsmAI GTCTC 7 cut(s) 338, 494, 993, 1041, 1082, 1495, 1746
BsmBI CGTCTC 2 cut(s) 338, 1082
BsmFI GGGAC 2 cut(s) 323, 1184
BsnI GGCC 3 cut(s) 1497, 1614, 1716
Bso31I GGTCTC 1 cut(s) 1746
BsoBI CYCGRG 1 cut(s) 341
Bsp1286I GDGCHC 1 cut(s) 775
Bsp13I TCCGGA 1 cut(s) 7
Bsp143I GATC 8 cut(s) 4, 48, 403, 619, 1373, 1508, 1514, 1568
Bsp1720I GCTNAGC 1 cut(s) 774
BspACI CCGC 4 cut(s) 25, 443, 1238, 1526
BspANI GGCC 3 cut(s) 1497, 1614, 1716
BspCNI CTCAG 6 cut(s) 58, 151, 787, 891, 1497, 1731
BspEI TCCGGA 1 cut(s) 7
BspFNI CGCG 1 cut(s) 27
BspHI TCATGA 1 cut(s) 1561
BspLI GGNNCC 8 cut(s) 6, 195, 984, 1328, 1341, 1516, 1530, 1608
BspMAI CTGCAG 1 cut(s) 1294
BspMI ACCTGC 1 cut(s) 142
BspPI GGATC 6 cut(s) 12, 43, 411, 627, 1509, 1522
BspT107I GGYRCC 3 cut(s) 193, 1339, 1528
BspTNI GGTCTC 1 cut(s) 1746
BsrDI GCAATG 2 cut(s) 600, 1582
BsrI ACTGG 2 cut(s) 282, 1586
BssECI CCNNGG 5 cut(s) 236, 1498, 1499, 1756, 1781
BssMI GATC 8 cut(s) 4, 48, 403, 619, 1373, 1508, 1514, 1568
BssNI GRCGYC 2 cut(s) 56, 547
BssT1I CCWWGG 1 cut(s) 1756
Bst2UI CCWGG 8 cut(s) 216, 237, 909, 1467, 1500, 1554, 1611, 1783
Bst4CI ACNGT 5 cut(s) 793, 893, 1117, 1331, 1489
Bst6I CTCTTC 2 cut(s) 116, 1605
BstACI GRCGYC 2 cut(s) 56, 547
BstBAI YACGTR 1 cut(s) 473
BstC8I GCNNGC 4 cut(s) 135, 289, 607, 1212
BstDEI CTNAG 7 cut(s) 45, 159, 774, 899, 956, 1505, 1718
BstENI CCTNNNNNAGG 1 cut(s) 912
BstF5I GGATG 4 cut(s) 21, 397, 1107, 1804
BstFNI CGCG 1 cut(s) 27
BstH2I RGCGCY 1 cut(s) 40
BstHHI GCGC 1 cut(s) 39
BstKTI GATC 8 cut(s) 7, 51, 406, 622, 1376, 1511, 1517, 1571
BstMAI GTCTC 7 cut(s) 338, 494, 993, 1041, 1082, 1495, 1746
BstMBI GATC 8 cut(s) 4, 48, 403, 619, 1373, 1508, 1514, 1568
BstNI CCWGG 8 cut(s) 216, 237, 909, 1467, 1500, 1554, 1611, 1783
BstNSI RCATGY 1 cut(s) 1178
BstSCI CCNGG 9 cut(s) 196, 214, 235, 907, 1465, 1498, 1552, 1609, 1781
BstSFI CTRYAG 2 cut(s) 1284, 1290
BstUI CGCG 1 cut(s) 27
BstV1I GCAGC 8 cut(s) 524, 627, 853, 856, 1132, 1276, 1304, 1315
BstX2I RGATCY 5 cut(s) 4, 48, 619, 1508, 1514
BstYI RGATCY 5 cut(s) 4, 48, 619, 1508, 1514
BsuRI GGCC 3 cut(s) 1497, 1614, 1716
BtgZI GCGATG 1 cut(s) 82
BtsCI GGATG 4 cut(s) 21, 397, 1107, 1804
BtsI GCAGTG 2 cut(s) 684, 689
BtsIMutI CAGTG 5 cut(s) 289, 684, 689, 1122, 1593
BveI ACCTGC 1 cut(s) 142
Cac8I GCNNGC 4 cut(s) 135, 289, 607, 1212
CaiI CAGNNNCTG 2 cut(s) 52, 1493
CciI TCATGA 1 cut(s) 1561
CfoI GCGC 1 cut(s) 39
Cfr13I GGNCC 4 cut(s) 983, 1469, 1496, 1643
CseI GACGC 4 cut(s) 64, 263, 536, 1099
Csp6I GTAC 4 cut(s) 29, 789, 871, 1340
CspCI CAANNNNNGTGG 2 cut(s) 1405, 1440
CviAII CATG 6 cut(s) 190, 269, 569, 1133, 1175, 1562
CviQI GTAC 4 cut(s) 29, 789, 871, 1340
DdeI CTNAG 7 cut(s) 45, 159, 774, 899, 956, 1505, 1718
DpnI GATC 8 cut(s) 6, 50, 405, 621, 1375, 1510, 1516, 1570
DpnII GATC 8 cut(s) 4, 48, 403, 619, 1373, 1508, 1514, 1568
Eam1104I CTCTTC 2 cut(s) 116, 1605
EarI CTCTTC 2 cut(s) 116, 1605
Ecl136II GAGCTC 1 cut(s) 773
Eco130I CCWWGG 1 cut(s) 1756
Eco147I AGGCCT 1 cut(s) 1716
Eco24I GRGCYC 1 cut(s) 775
Eco31I GGTCTC 1 cut(s) 1746
Eco32I GATATC 1 cut(s) 187
Eco47I GGWCC 3 cut(s) 983, 1469, 1643
Eco47III AGCGCT 1 cut(s) 38
Eco53kI GAGCTC 1 cut(s) 773
Eco57I CTGAAG 4 cut(s) 1127, 1566, 1586, 1731
Eco88I CYCGRG 1 cut(s) 341
EcoICRI GAGCTC 1 cut(s) 773
EcoNI CCTNNNNNAGG 1 cut(s) 912
EcoRI GAATTC 3 cut(s) 178, 314, 1663
EcoRII CCWGG 8 cut(s) 214, 235, 907, 1465, 1498, 1552, 1609, 1781
EcoRV GATATC 1 cut(s) 187
EcoT14I CCWWGG 1 cut(s) 1756
EcoT38I GRGCYC 1 cut(s) 775
ErhI CCWWGG 1 cut(s) 1756
Esp3I CGTCTC 2 cut(s) 338, 1082
FaeI CATG 6 cut(s) 193, 272, 572, 1136, 1178, 1565
FalI AAGNNNNNCTT 6 cut(s) 691, 723, 906, 938, 932, 964
FaqI GGGAC 2 cut(s) 323, 1184
FatI CATG 6 cut(s) 189, 268, 568, 1132, 1174, 1561
FauI CCCGC 1 cut(s) 1245
Fnu4HI GCNGC 8 cut(s) 513, 641, 842, 845, 1121, 1290, 1293, 1304
FokI GGATG 3 cut(s) 8, 404, 1114
FriOI GRGCYC 1 cut(s) 775
Fsp4HI GCNGC 8 cut(s) 513, 641, 842, 845, 1121, 1290, 1293, 1304
GlaI GCGC 1 cut(s) 38
GluI GCNGC 8 cut(s) 513, 641, 842, 845, 1121, 1290, 1293, 1304
GsaI CCCAGC 1 cut(s) 1656
HaeII RGCGCY 1 cut(s) 40
HaeIII GGCC 3 cut(s) 1497, 1614, 1716
HapII CCGG 4 cut(s) 8, 197, 986, 1472
HgaI GACGC 4 cut(s) 64, 263, 536, 1099
HhaI GCGC 1 cut(s) 39
Hin1I GRCGYC 2 cut(s) 56, 547
Hin1II CATG 6 cut(s) 193, 272, 572, 1136, 1178, 1565
Hin6I GCGC 1 cut(s) 37
HinP1I GCGC 1 cut(s) 37
HindIII AAGCTT 1 cut(s) 1764
HinfI GANTC 7 cut(s) 308, 397, 467, 1096, 1184, 1627, 1775
HpaII CCGG 4 cut(s) 8, 197, 986, 1472
HphI GGTGA 1 cut(s) 310
Hpy166II GTNNAC 4 cut(s) 796, 896, 1113, 1676
Hpy188III TCNNGA 9 cut(s) 8, 52, 401, 562, 623, 1324, 1512, 1562, 1796
Hpy8I GTNNAC 4 cut(s) 796, 896, 1113, 1676
HpyAV CCTTC 3 cut(s) 28, 1542, 1706
HpyCH4III ACNGT 5 cut(s) 793, 893, 1117, 1331, 1489
HpyCH4IV ACGT 2 cut(s) 144, 472
HpyF3I CTNAG 7 cut(s) 45, 159, 774, 899, 956, 1505, 1718
HpySE526I ACGT 2 cut(s) 144, 472
Hsp92I GRCGYC 2 cut(s) 56, 547
Hsp92II CATG 6 cut(s) 193, 272, 572, 1136, 1178, 1565
HspAI GCGC 1 cut(s) 37
Kpn2I TCCGGA 1 cut(s) 7
KpnI GGTACC 1 cut(s) 1343
Kzo9I GATC 8 cut(s) 4, 48, 403, 619, 1373, 1508, 1514, 1568
LmnI GCTCC 4 cut(s) 10, 1541, 1555, 1700
Lsp1109I GCAGC 8 cut(s) 524, 627, 853, 856, 1132, 1276, 1304, 1315
LweI GCATC 3 cut(s) 430, 1092, 1315
MaeII ACGT 2 cut(s) 144, 472
MaeIII GTNAC 3 cut(s) 297, 468, 1009
MalI GATC 8 cut(s) 6, 50, 405, 621, 1375, 1510, 1516, 1570
MboI GATC 8 cut(s) 4, 48, 403, 619, 1373, 1508, 1514, 1568
MboII GAAGA 4 cut(s) 103, 600, 1383, 1592
MflI RGATCY 5 cut(s) 4, 48, 619, 1508, 1514
MhlI GDGCHC 1 cut(s) 775
MlyI GAGTC 3 cut(s) 317, 476, 1090
MmeI TCCRAC 3 cut(s) 565, 1175, 1408
MnlI CCTC 9 cut(s) 457, 569, 973, 1330, 1423, 1438, 1691, 1717, 1727
MroI TCCGGA 1 cut(s) 7
MroXI GAANNNNTTC 1 cut(s) 1667
MseI TTAA 6 cut(s) 273, 666, 855, 951, 1082, 1451
MslI CAYNNNNRTG 2 cut(s) 323, 1221
MspA1I CMGCKG 2 cut(s) 1289, 1526
MspI CCGG 4 cut(s) 8, 197, 986, 1472
MspR9I CCNGG 9 cut(s) 198, 216, 237, 909, 1467, 1500, 1554, 1611, 1783
MvaI CCWGG 8 cut(s) 216, 237, 909, 1467, 1500, 1554, 1611, 1783
MvnI CGCG 1 cut(s) 27
NciI CCSGG 1 cut(s) 198
NdeII GATC 8 cut(s) 4, 48, 403, 619, 1373, 1508, 1514, 1568
NlaIII CATG 6 cut(s) 193, 272, 572, 1136, 1178, 1565
NlaIV GGNNCC 8 cut(s) 6, 195, 984, 1328, 1341, 1516, 1530, 1608
NmuCI GTSAC 3 cut(s) 297, 468, 1009
NspI RCATGY 1 cut(s) 1178
OliI CACNNNNGTG 1 cut(s) 323
PagI TCATGA 1 cut(s) 1561
PaqCI CACCTGC 1 cut(s) 142
PasI CCCWGGG 1 cut(s) 1499
PceI AGGCCT 1 cut(s) 1716
PcsI WCGNNNNNNNCGW 1 cut(s) 141
PdmI GAANNNNTTC 1 cut(s) 1667
PfeI GAWTC 4 cut(s) 397, 1184, 1627, 1775
PflFI GACNNNGTC 1 cut(s) 1487
PkrI GCNGC 8 cut(s) 514, 642, 843, 846, 1122, 1291, 1294, 1305
PleI GAGTC 3 cut(s) 316, 475, 1090
PpsI GAGTC 3 cut(s) 316, 475, 1090
Ppu21I YACGTR 1 cut(s) 473
PsiI TTATAA 1 cut(s) 927
Psp124BI GAGCTC 1 cut(s) 775
Psp6I CCWGG 8 cut(s) 214, 235, 907, 1465, 1498, 1552, 1609, 1781
PspFI CCCAGC 1 cut(s) 1652
PspGI CCWGG 8 cut(s) 214, 235, 907, 1465, 1498, 1552, 1609, 1781
PspN4I GGNNCC 8 cut(s) 6, 195, 984, 1328, 1341, 1516, 1530, 1608
PspPI GGNCC 4 cut(s) 983, 1469, 1496, 1643
PstI CTGCAG 1 cut(s) 1294
PstNI CAGNNNCTG 2 cut(s) 52, 1493
PsuI RGATCY 5 cut(s) 4, 48, 619, 1508, 1514
PsyI GACNNNGTC 1 cut(s) 1487
PvuII CAGCTG 1 cut(s) 1289
RsaI GTAC 4 cut(s) 30, 790, 872, 1341
RsaNI GTAC 4 cut(s) 29, 789, 871, 1340
RseI CAYNNNNRTG 2 cut(s) 323, 1221
SacI GAGCTC 1 cut(s) 775
SaqAI TTAA 6 cut(s) 273, 666, 855, 951, 1082, 1451
SatI GCNGC 8 cut(s) 513, 641, 842, 845, 1121, 1290, 1293, 1304
Sau3AI GATC 8 cut(s) 4, 48, 403, 619, 1373, 1508, 1514, 1568
Sau96I GGNCC 4 cut(s) 983, 1469, 1496, 1643
SchI GAGTC 3 cut(s) 317, 476, 1090
ScrFI CCNGG 9 cut(s) 198, 216, 237, 909, 1467, 1500, 1554, 1611, 1783
SduI GDGCHC 1 cut(s) 775
SfaNI GCATC 3 cut(s) 430, 1092, 1315
SfcI CTRYAG 2 cut(s) 1284, 1290
SinI GGWCC 3 cut(s) 983, 1469, 1643
SmiMI CAYNNNNRTG 2 cut(s) 323, 1221
SmlI CTYRAG 1 cut(s) 689
SmoI CTYRAG 1 cut(s) 689
SseBI AGGCCT 1 cut(s) 1716
SsiI CCGC 4 cut(s) 25, 443, 1238, 1526
SspI AATATT 1 cut(s) 784
SstI GAGCTC 1 cut(s) 775
StuI AGGCCT 1 cut(s) 1716
StyD4I CCNGG 9 cut(s) 196, 214, 235, 907, 1465, 1498, 1552, 1609, 1781
StyI CCWWGG 1 cut(s) 1756
TaaI ACNGT 5 cut(s) 793, 893, 1117, 1331, 1489
TaiI ACGT 2 cut(s) 147, 475
TaqI TCGA 3 cut(s) 652, 814, 1369
TfiI GAWTC 4 cut(s) 397, 1184, 1627, 1775
Tru1I TTAA 6 cut(s) 273, 666, 855, 951, 1082, 1451
Tru9I TTAA 6 cut(s) 273, 666, 855, 951, 1082, 1451
TscAI CASTG 5 cut(s) 289, 684, 689, 1122, 1593
TseFI GTSAC 3 cut(s) 297, 468, 1009
TseI GCWGC 8 cut(s) 512, 640, 841, 844, 1120, 1289, 1292, 1303
Tsp45I GTSAC 3 cut(s) 297, 468, 1009
TspDTI ATGAA 9 cut(s) 10, 85, 257, 464, 512, 1239, 1550, 1578, 1676
TspRI CASTG 5 cut(s) 289, 684, 689, 1122, 1593
Tth111I GACNNNGTC 1 cut(s) 1487
VpaK11BI GGWCC 3 cut(s) 983, 1469, 1643
XagI CCTNNNNNAGG 1 cut(s) 912
XapI RAATTY 5 cut(s) 178, 314, 350, 371, 1663
XceI RCATGY 1 cut(s) 1178
XmnI GAANNNNTTC 1 cut(s) 1667
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.