RchiOBHm_Chr1g0351761

Xylem serine proteinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0014944
Physical Location & Seq
Forward (+)
45001178 .. 45005888
4711 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2208 bp
ATGTTGAATTTAGTGTTATACTTGTTTGACATTTCTAATCATGGTTATGAAAATATTACACAGAAGTTTTACATTGTATATTTGGGTGATCACCCTGCTGATCATGAAGACTCTGCAGCCCAAACACATACGAATGTCCTCTCATCTGTAACAGGAAGCTATTCTGGTGCAACAGAGTCCATGGTTTATAGCTATACAAAGAGCTTCAATGCATTTGCTGCTAAGCTTTCCAGTGACGAAGCTGAAAAGCTATCAAGAATGGATCAAGTTCTCTCTGTGATTCCAAATAGGTATCACAAGCTGCACACAACAAGGTCATGGAACTTCATTGGGTTACCATTAAAAGCTAAAAGAGATTTAAAAAGTGAAAGTGACATTATAGTTGGTCTCTTTGATACAGGAATTACTCCAGAGTCCCAAAGCTTTAAGGATGAAGGCTTTAGTCCTCCACCAGCAAAATGGAAAGGAACTTGTGGCCAGTTTGCTAATTTCTCAGGATGCAACAACAAAATCATAGGAGCTAGATACTTCAAGCTTGATGGCACTCCAGACCCAGCTGACATCTTATCTCCAGTGGATGTGGATGGACATGGGACTCACACATCATCGACCTTAGCTGGCAACCTAGTGCCGAATGCCAACCTCTATGGCCTTGCTAAGGGCACTGCACGAGGGGCAGTGCCATCAGCTAGGGTGTCCATGTACAAAGTATGTTGGGCTAGTTTCGGCTGCTCTGACATGGACATTCTTGCTGCGTATGAAGCTGCCATACACGATGGCGTGGATGTCATATCGATTTCCATTGGTGGAGGGGGAGCCTCTTATACTTTGGATAGTATAGCAGTTGGTTCATTTCATGCCATGAAGAATGGTATTATTACAGTGGCCTCAGCTGGAAATGATGGACCAAGTTTGGGGAGTATTGTCAACCATGCACCATGGTTGGTAACTGTGGCAGCTAGTGGCATTGATAGGCAGTTCATTAGCAAAGTTCATTTGGGCAATGGGAAGAATTTTGCAGGGATTGGAGTGAGCACATTTAATCCAAATAAGACGTTGTACCCCCTTGTTAGTGGGGCTGATGTAGCACAAAGCTCGGAAAGCAAAGAAAATGCAAGGTTCTGTGCTGAGGACTCATTAGACCCTAAAAAAGTAAAGGGAAAGATTGTTTTCTGCCAATTTAGATCTTGGGGTACAGATTCTGTCATTAAAGGAAATGGAGGAGTTGGTACCATTGTTGAAAACGATCAATTTCTCGATGCTGCTCAAATATTCATGGCACCAGGAACCATGGTTAACTCTACAGTTGGCGAAAGCATTGATGCCTATATACATTCAGCAAGATCACCATCAGCAGTTATATTCAAGTCACAAGAAGCACAAAAACGTGCTCCATATGTTGCTTCATTTTCATCCAGGGGTCCAAATCCGGGATCAGAACACATTCTAAAGCCTGATATTGCAGCACCTGGGATTGACATTTTGGCATCTTACACTCCATTGAAGTCACTTACTGGGTTGGATGGTGACACACAATTCTCAGAATTCACACTCATGTCTGGAACTTCAATGGCATGTCCACATGTTGCTGGTGTAGCAGCATATGTTAAGTCATTTCACCCGAATTGGTCTCAAGCTGCAATAAGATCTGCCATCATGACCACAGCAACACCGATGAGCCATAGAGTGAACACAGAAGCAGAATTCGCCTATGGTGCTGGTCAAGTGAACCCGAGAAAGGCTGTGAATCCAGGCTTAATCTATGACATGGATGAAATGTCATACATTCAGTTCCTATGCCATGAAGGCTATAGTGGCTCCTCATTAGCCCCATTAGTTGGCTCAAAGTCCATAAACTGCTCCTCGTTGATTCCTGGACTCGGCTACGATGCTCTCAACTATCCCACCATCCAGCTCAGCTTGAAAAGCAGCAAGCAACCGACAGTAGCTGTTTTCATAAGAACTGTCACTAATGTTGGTCCTGCTAGTTCCACATACAATGCCACCATCAGAGCACCAAAGGGAGTGGAAATCACTGTCAAACCCATGAGTCTGACTTTCTCTCATGCTTTGCAAAAGAGGAGCTTCCAAGTTGTCGTGAAGGCGAATCCGATAGACAGTATGCAAATGGTGTCTGGCTCGCTCGGATGGAAAAGCTCTAGGTACACCGTGAGGAGTCCCATTGTGGTTTACAGTCCAGGAAATTAA

Protein Analysis

735

Amino Acids

78.36

Weight (kDa)

7.62

Isoelectric Point (pI)

29.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 24 - 102 1.4e-18 Peptidase inhibitor I9
Peptidase_S8 PF00082 124 - 574 1.3e-45 Subtilase family
fn3_6 PF17766 632 - 730 1.6e-27 Fibronectin type-III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014944)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00230 AT4G00230
fragaria_vesca FvH4_7g12740
malus_domestica MD02G1196900.v1.1
prunus_persica Prupe.2G151900_v2.0.a1
pyrus_communis pycom02g16020
rosa_chinensis RchiOBHm_Chr1g0351761
rosa_laevigata RLG00000028385
rosa_multiflora Rmu_sc0001933.1_g000013
rosa_roxburghii Rroxscaffold_4G00303570
rosa_rugosa Rorug01G0221200
rosa_samantha Rh1AG235200 Rh1BG205700 Rh1CG219800 Rh1DG232700
rosa_wichuraiana Rw1G020470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1229
AccB1I GGYRCC 2 cut(s) 1229, 1279
AccB7I CCANNNNNTGG 1 cut(s) 1838
AclWI GGATC 2 cut(s) 270, 1441
AcoI YGGCCR 1 cut(s) 475
AcsI RAATTY 4 cut(s) 7, 1012, 1544, 1703
AfaI GTAC 5 cut(s) 704, 1061, 1195, 1231, 2165
AfiI CCNNNNNNNGG 6 cut(s) 658, 914, 1430, 1738, 1838, 1880
AflIII ACRYGT 1 cut(s) 1582
AgsI TTSAA 8 cut(s) 7, 208, 532, 1241, 1366, 1504, 1569, 1924
AjnI CCWGG 6 cut(s) 1282, 1415, 1468, 1750, 1873, 2197
Alw21I GWGCWC 3 cut(s) 1037, 1393, 2017
Alw26I GTCTC 2 cut(s) 392, 1635
AlwI GGATC 2 cut(s) 270, 1441
AlwNI CAGNNNCTG 3 cut(s) 1202, 1469, 1949
Ama87I CYCGRG 1 cut(s) 1732
AoxI GGCC 3 cut(s) 475, 649, 885
ApoI RAATTY 4 cut(s) 7, 1012, 1544, 1703
Asp700I GAANNNNTTC 2 cut(s) 160, 1443
Asp718I GGTACC 1 cut(s) 1229
AspS9I GGNCC 3 cut(s) 905, 1421, 1979
AsuC2I CCSGG 1 cut(s) 1431
AsuHPI GGTGA 5 cut(s) 83, 98, 1338, 1538, 1610
AvaI CYCGRG 1 cut(s) 1732
AvaII GGWCC 3 cut(s) 905, 1421, 1979
BaeGI GKGCMC 1 cut(s) 665
BaeI ACNNNNGTAYC 2 cut(s) 1221, 1254
BalI TGGCCA 1 cut(s) 477
BanI GGYRCC 2 cut(s) 1229, 1279
BarI GAAGNNNNNNTAC 2 cut(s) 753, 785
BauI CACGAG 1 cut(s) 669
BbsI GAAGAC 1 cut(s) 114
Bbv12I GWGCWC 3 cut(s) 1037, 1393, 2017
BbvCI CCTCAGC 2 cut(s) 889, 1128
BcgI CGANNNNNNTGC 2 cut(s) 1077, 1111
BciT130I CCWGG 6 cut(s) 1284, 1417, 1470, 1752, 1875, 2199
BclI TGATCA 2 cut(s) 88, 100
BcnI CCSGG 1 cut(s) 1431
BcoDI GTCTC 2 cut(s) 392, 1635
BfaI CTAG 7 cut(s) 522, 626, 690, 720, 960, 1986, 2160
BfmI CTRYAG 3 cut(s) 114, 1302, 1810
BglI GCCNNNNNGGC 1 cut(s) 1806
BglII AGATCT 2 cut(s) 1184, 1646
BlpI GCTNAGC 2 cut(s) 222, 1916
Bme1390I CCNGG 7 cut(s) 1284, 1417, 1431, 1470, 1752, 1875, 2199
Bme18I GGWCC 3 cut(s) 905, 1421, 1979
BmeT110I CYCGRG 1 cut(s) 1732
BmgT120I GGNCC 3 cut(s) 905, 1421, 1979
BmiI GGNNCC 6 cut(s) 817, 1231, 1281, 1288, 1422, 1819
BmrFI CCNGG 7 cut(s) 1284, 1417, 1431, 1470, 1752, 1875, 2199
BmrI ACTGGG 1 cut(s) 1524
BmsI GCATC 5 cut(s) 488, 1249, 1312, 1496, 1879
BmuI ACTGGG 1 cut(s) 1524
BpiI GAAGAC 1 cut(s) 114
BpmI CTGGAG 3 cut(s) 393, 531, 555
Bpu10I CCTNAGC 4 cut(s) 613, 657, 889, 1128
Bpu1102I GCTNAGC 2 cut(s) 222, 1916
BpuEI CTTGAG 1 cut(s) 1617
BpuMI CCSGG 1 cut(s) 1431
Bsa29I ATCGAT 1 cut(s) 794
BsaBI GATNNNNATC 1 cut(s) 1348
BsaI GGTCTC 2 cut(s) 392, 1635
BsaJI CCNNGG 5 cut(s) 180, 938, 1290, 1416, 1469
Bsc4I CCNNNNNNNGG 6 cut(s) 658, 914, 1430, 1738, 1838, 1880
Bse1I ACTGG 4 cut(s) 231, 478, 572, 1519
Bse3DI GCAATG 1 cut(s) 1009
Bse8I GATNNNNATC 1 cut(s) 1348
BseBI CCWGG 6 cut(s) 1284, 1417, 1470, 1752, 1875, 2199
BseCI ATCGAT 1 cut(s) 794
BseDI CCNNGG 5 cut(s) 180, 938, 1290, 1416, 1469
BseJI GATNNNNATC 1 cut(s) 1348
BseLI CCNNNNNNNGG 6 cut(s) 658, 914, 1430, 1738, 1838, 1880
BseMI GCAATG 1 cut(s) 1009
BseMII CTCAG 5 cut(s) 507, 903, 1119, 1554, 1930
BseNI ACTGG 4 cut(s) 231, 478, 572, 1519
BseRI GAGGAG 5 cut(s) 1236, 1810, 1852, 2095, 2188
BseSI GKGCMC 1 cut(s) 665
BseYI CCCAGC 1 cut(s) 553
BsgI GTGCAG 2 cut(s) 287, 651
BshFI GGCC 3 cut(s) 477, 651, 887
BshNI GGYRCC 2 cut(s) 1229, 1279
BshVI ATCGAT 1 cut(s) 794
BsiHKAI GWGCWC 3 cut(s) 1037, 1393, 2017
BsiHKCI CYCGRG 1 cut(s) 1732
BsiSI CCGG 1 cut(s) 1430
BslFI GGGAC 3 cut(s) 400, 607, 2163
BslI CCNNNNNNNGG 6 cut(s) 658, 914, 1430, 1738, 1838, 1880
BsmAI GTCTC 2 cut(s) 392, 1635
BsmFI GGGAC 3 cut(s) 400, 607, 2163
BsmI GAATGC 1 cut(s) 640
BsnI GGCC 3 cut(s) 477, 651, 887
Bso31I GGTCTC 2 cut(s) 392, 1635
BsoBI CYCGRG 1 cut(s) 1732
Bsp1286I GDGCHC 4 cut(s) 665, 1037, 1393, 2017
Bsp1407I TGTACA 1 cut(s) 702
Bsp143I GATC 8 cut(s) 88, 100, 262, 1184, 1246, 1343, 1433, 1646
Bsp1720I GCTNAGC 2 cut(s) 222, 1916
Bsp19I CCATGG 3 cut(s) 180, 938, 1290
BspANI GGCC 3 cut(s) 477, 651, 887
BspCNI CTCAG 5 cut(s) 506, 902, 1120, 1553, 1929
BspDI ATCGAT 1 cut(s) 794
BspHI TCATGA 2 cut(s) 103, 1656
BspLI GGNNCC 6 cut(s) 817, 1231, 1281, 1288, 1422, 1819
BspMAI CTGCAG 1 cut(s) 118
BspPI GGATC 2 cut(s) 270, 1441
BspT107I GGYRCC 2 cut(s) 1229, 1279
BspTNI GGTCTC 2 cut(s) 392, 1635
BsrDI GCAATG 1 cut(s) 1009
BsrGI TGTACA 1 cut(s) 702
BsrI ACTGG 4 cut(s) 231, 478, 572, 1519
BssECI CCNNGG 5 cut(s) 180, 938, 1290, 1416, 1469
BssMI GATC 8 cut(s) 88, 100, 262, 1184, 1246, 1343, 1433, 1646
BssSI CACGAG 1 cut(s) 669
BssT1I CCWWGG 3 cut(s) 180, 938, 1290
Bst2BI CACGAG 1 cut(s) 669
Bst2UI CCWGG 6 cut(s) 1284, 1417, 1470, 1752, 1875, 2199
Bst4CI ACNGT 9 cut(s) 883, 952, 1306, 1945, 1966, 2038, 2120, 2170, 2195
BstAPI GCANNNNNTGC 1 cut(s) 218
BstAUI TGTACA 1 cut(s) 702
BstC8I GCNNGC 3 cut(s) 619, 1934, 2141
BstDEI CTNAG 8 cut(s) 222, 493, 613, 657, 889, 1128, 1540, 1916
BstDSI CCRYGG 3 cut(s) 180, 938, 1290
BstEII GGTNACC 1 cut(s) 333
BstENI CCTNNNNNAGG 1 cut(s) 656
BstKTI GATC 8 cut(s) 91, 103, 265, 1187, 1249, 1346, 1436, 1649
BstMAI GTCTC 2 cut(s) 392, 1635
BstMBI GATC 8 cut(s) 88, 100, 262, 1184, 1246, 1343, 1433, 1646
BstNI CCWGG 6 cut(s) 1284, 1417, 1470, 1752, 1875, 2199
BstNSI RCATGY 2 cut(s) 1578, 1586
BstPI GGTNACC 1 cut(s) 333
BstSCI CCNGG 7 cut(s) 1282, 1415, 1429, 1468, 1750, 1873, 2197
BstSFI CTRYAG 3 cut(s) 114, 1302, 1810
BstSLI GKGCMC 1 cut(s) 665
BstV2I GAAGAC 1 cut(s) 114
BstX2I RGATCY 2 cut(s) 1184, 1646
BstXI CCANNNNNNTGG 1 cut(s) 459
BstYI RGATCY 2 cut(s) 1184, 1646
Bsu15I ATCGAT 1 cut(s) 794
BsuRI GGCC 3 cut(s) 477, 651, 887
BsuTUI ATCGAT 1 cut(s) 794
BtgI CCRYGG 3 cut(s) 180, 938, 1290
BtsI GCAGTG 2 cut(s) 663, 684
BtsIMutI CAGTG 6 cut(s) 238, 579, 663, 684, 888, 2034
Cac8I GCNNGC 3 cut(s) 619, 1934, 2141
CaiI CAGNNNCTG 3 cut(s) 1202, 1469, 1949
CciI TCATGA 2 cut(s) 103, 1656
Cfr13I GGNCC 3 cut(s) 905, 1421, 1979
ClaI ATCGAT 1 cut(s) 794
Csp6I GTAC 5 cut(s) 703, 1060, 1194, 1230, 2164
CspCI CAANNNNNGTGG 2 cut(s) 2007, 2042
CviQI GTAC 5 cut(s) 703, 1060, 1194, 1230, 2164
DdeI CTNAG 8 cut(s) 222, 493, 613, 657, 889, 1128, 1540, 1916
DpnI GATC 8 cut(s) 90, 102, 264, 1186, 1248, 1345, 1435, 1648
DpnII GATC 8 cut(s) 88, 100, 262, 1184, 1246, 1343, 1433, 1646
DraI TTTAAA 1 cut(s) 360
EaeI YGGCCR 1 cut(s) 475
Eco130I CCWWGG 3 cut(s) 180, 938, 1290
Eco31I GGTCTC 2 cut(s) 392, 1635
Eco47I GGWCC 3 cut(s) 905, 1421, 1979
Eco88I CYCGRG 1 cut(s) 1732
Eco91I GGTNACC 1 cut(s) 333
EcoNI CCTNNNNNAGG 1 cut(s) 656
EcoO65I GGTNACC 1 cut(s) 333
EcoRI GAATTC 2 cut(s) 1544, 1703
EcoRII CCWGG 6 cut(s) 1282, 1415, 1468, 1750, 1873, 2197
EcoT14I CCWWGG 3 cut(s) 180, 938, 1290
EcoT22I ATGCAT 1 cut(s) 214
ErhI CCWWGG 3 cut(s) 180, 938, 1290
FalI AAGNNNNNCTT 2 cut(s) 2069, 2101
FaqI GGGAC 3 cut(s) 400, 607, 2163
FauNDI CATATG 2 cut(s) 1396, 1603
FbaI TGATCA 2 cut(s) 88, 100
FspBI CTAG 7 cut(s) 522, 626, 690, 720, 960, 1986, 2160
GsaI CCCAGC 1 cut(s) 557
GsuI CTGGAG 3 cut(s) 393, 531, 555
HaeIII GGCC 3 cut(s) 477, 651, 887
HapII CCGG 1 cut(s) 1430
HincII GTYRAC 2 cut(s) 928, 1297
HindII GTYRAC 2 cut(s) 928, 1297
HindIII AAGCTT 3 cut(s) 224, 421, 533
HpaI GTTAAC 1 cut(s) 1297
HpaII CCGG 1 cut(s) 1430
HphI GGTGA 5 cut(s) 83, 98, 1338, 1538, 1610
Hpy166II GTNNAC 7 cut(s) 928, 1297, 1580, 1690, 1729, 2166, 2191
Hpy188I TCNGA 8 cut(s) 736, 1099, 1438, 1543, 2012, 2055, 2112, 2147
Hpy188III TCNNGA 9 cut(s) 104, 255, 410, 495, 548, 1256, 1560, 1657, 2098
Hpy8I GTNNAC 7 cut(s) 928, 1297, 1580, 1690, 1729, 2166, 2191
HpyAV CCTTC 3 cut(s) 428, 1799, 2095
HpyCH4III ACNGT 9 cut(s) 883, 952, 1306, 1945, 1966, 2038, 2120, 2170, 2195
HpyCH4IV ACGT 2 cut(s) 1055, 1387
HpyF3I CTNAG 8 cut(s) 222, 493, 613, 657, 889, 1128, 1540, 1916
HpySE526I ACGT 2 cut(s) 1055, 1387
KpnI GGTACC 1 cut(s) 1233
Ksp22I TGATCA 2 cut(s) 88, 100
KspAI GTTAAC 1 cut(s) 1297
Kzo9I GATC 8 cut(s) 88, 100, 262, 1184, 1246, 1343, 1433, 1646
LmnI GCTCC 6 cut(s) 518, 815, 1396, 1823, 1865, 2082
LweI GCATC 5 cut(s) 488, 1249, 1312, 1496, 1879
MaeI CTAG 7 cut(s) 522, 626, 690, 720, 960, 1986, 2160
MaeII ACGT 2 cut(s) 1055, 1387
MaeIII GTNAC 9 cut(s) 148, 233, 333, 371, 946, 1368, 1506, 1526, 1966
MalI GATC 8 cut(s) 90, 102, 264, 1186, 1248, 1345, 1435, 1648
MboI GATC 8 cut(s) 88, 100, 262, 1184, 1246, 1343, 1433, 1646
MboII GAAGA 3 cut(s) 119, 877, 1021
MflI RGATCY 2 cut(s) 1184, 1646
MhlI GDGCHC 4 cut(s) 665, 1037, 1393, 2017
MlsI TGGCCA 1 cut(s) 477
MluNI TGGCCA 1 cut(s) 477
MlyI GAGTC 8 cut(s) 104, 185, 422, 589, 1127, 1872, 2059, 2185
MmeI TCCRAC 1 cut(s) 1500
Mox20I TGGCCA 1 cut(s) 477
Mph1103I ATGCAT 1 cut(s) 214
MroXI GAANNNNTTC 2 cut(s) 160, 1443
MscI TGGCCA 1 cut(s) 477
MseI TTAA 9 cut(s) 341, 359, 426, 1041, 1209, 1296, 1608, 1757, 2206
MslI CAYNNNNRTG 3 cut(s) 45, 132, 1553
Msp20I TGGCCA 1 cut(s) 477
MspA1I CMGCKG 2 cut(s) 557, 893
MspI CCGG 1 cut(s) 1430
MspR9I CCNGG 7 cut(s) 1284, 1417, 1431, 1470, 1752, 1875, 2199
Mva1269I GAATGC 1 cut(s) 640
MvaI CCWGG 6 cut(s) 1284, 1417, 1470, 1752, 1875, 2199
NciI CCSGG 1 cut(s) 1431
NcoI CCATGG 3 cut(s) 180, 938, 1290
NdeI CATATG 2 cut(s) 1396, 1603
NdeII GATC 8 cut(s) 88, 100, 262, 1184, 1246, 1343, 1433, 1646
NlaIV GGNNCC 6 cut(s) 817, 1231, 1281, 1288, 1422, 1819
NmeAIII GCCGAG 1 cut(s) 1860
NmuCI GTSAC 6 cut(s) 233, 371, 1368, 1506, 1526, 1966
NsiI ATGCAT 1 cut(s) 214
NspI RCATGY 2 cut(s) 1578, 1586
PagI TCATGA 2 cut(s) 103, 1656
PciI ACATGT 1 cut(s) 1582
PctI GAATGC 1 cut(s) 640
PdmI GAANNNNTTC 2 cut(s) 160, 1443
PfeI GAWTC 5 cut(s) 280, 1199, 1747, 1870, 2107
PflMI CCANNNNNTGG 1 cut(s) 1838
PfoI TCCNGGA 3 cut(s) 1429, 1873, 2197
PleI GAGTC 8 cut(s) 104, 184, 421, 589, 1127, 1872, 2058, 2184
PpsI GAGTC 8 cut(s) 104, 184, 421, 589, 1127, 1872, 2058, 2184
PscI ACATGT 1 cut(s) 1582
Psp6I CCWGG 6 cut(s) 1282, 1415, 1468, 1750, 1873, 2197
PspEI GGTNACC 1 cut(s) 333
PspFI CCCAGC 1 cut(s) 553
PspGI CCWGG 6 cut(s) 1282, 1415, 1468, 1750, 1873, 2197
PspN4I GGNNCC 6 cut(s) 817, 1231, 1281, 1288, 1422, 1819
PspPI GGNCC 3 cut(s) 905, 1421, 1979
PstI CTGCAG 1 cut(s) 118
PstNI CAGNNNCTG 3 cut(s) 1202, 1469, 1949
PsuI RGATCY 2 cut(s) 1184, 1646
PvuII CAGCTG 2 cut(s) 557, 893
RsaI GTAC 5 cut(s) 704, 1061, 1195, 1231, 2165
RsaNI GTAC 5 cut(s) 703, 1060, 1194, 1230, 2164
RseI CAYNNNNRTG 3 cut(s) 45, 132, 1553
SaqAI TTAA 9 cut(s) 341, 359, 426, 1041, 1209, 1296, 1608, 1757, 2206
Sau3AI GATC 8 cut(s) 88, 100, 262, 1184, 1246, 1343, 1433, 1646
Sau96I GGNCC 3 cut(s) 905, 1421, 1979
SchI GAGTC 8 cut(s) 104, 185, 422, 589, 1127, 1872, 2059, 2185
ScrFI CCNGG 7 cut(s) 1284, 1417, 1431, 1470, 1752, 1875, 2199
SduI GDGCHC 4 cut(s) 665, 1037, 1393, 2017
SfaNI GCATC 5 cut(s) 488, 1249, 1312, 1496, 1879
SfcI CTRYAG 3 cut(s) 114, 1302, 1810
SinI GGWCC 3 cut(s) 905, 1421, 1979
SmiMI CAYNNNNRTG 3 cut(s) 45, 132, 1553
SmlI CTYRAG 1 cut(s) 1632
SmoI CTYRAG 1 cut(s) 1632
SspI AATATT 2 cut(s) 55, 1272
SspMI CTAG 7 cut(s) 522, 626, 690, 720, 960, 1986, 2160
StyD4I CCNGG 7 cut(s) 1282, 1415, 1429, 1468, 1750, 1873, 2197
StyI CCWWGG 3 cut(s) 180, 938, 1290
TaaI ACNGT 9 cut(s) 883, 952, 1306, 1945, 1966, 2038, 2120, 2170, 2195
TaiI ACGT 2 cut(s) 1058, 1390
TaqI TCGA 3 cut(s) 608, 794, 1257
TatI WGTACW 1 cut(s) 702
TfiI GAWTC 5 cut(s) 280, 1199, 1747, 1870, 2107
Tru1I TTAA 9 cut(s) 341, 359, 426, 1041, 1209, 1296, 1608, 1757, 2206
Tru9I TTAA 9 cut(s) 341, 359, 426, 1041, 1209, 1296, 1608, 1757, 2206
TscAI CASTG 6 cut(s) 238, 579, 670, 684, 888, 2041
TseFI GTSAC 6 cut(s) 233, 371, 1368, 1506, 1526, 1966
Tsp45I GTSAC 6 cut(s) 233, 371, 1368, 1506, 1526, 1966
TspRI CASTG 6 cut(s) 238, 579, 670, 684, 888, 2041
Van91I CCANNNNNTGG 1 cut(s) 1838
VpaK11BI GGWCC 3 cut(s) 905, 1421, 1979
XagI CCTNNNNNAGG 1 cut(s) 656
XapI RAATTY 4 cut(s) 7, 1012, 1544, 1703
XceI RCATGY 2 cut(s) 1578, 1586
XcmI CCANNNNNNNNNTGG 1 cut(s) 456
XmnI GAANNNNTTC 2 cut(s) 160, 1443
XspI CTAG 7 cut(s) 522, 626, 690, 720, 960, 1986, 2160
Zsp2I ATGCAT 1 cut(s) 214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.