Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008413

Physical Location & Seq

Genomic Coordinates Reverse (-)

54885823 .. 54892854

Gene Structure 7032 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1326 bp

ATGGCTTCTTCGTCTCTCACATCCAAACCCTTTCTGGGTTCTGCTTCAAGGACCGAACGGCTATCTGGGTTGTGTTCTAATCTTCGAAACCTGTCCTCCCCCTCCGTTCAGTTCGTGGTCCGGCCTCGGACCGCCAAGAAGCTCCAGGTGCAGGCAGCTGGGAGTACTTTTGGGAATTACTTTCGTGTTACAACTTATGGAGAGTCTCATGGTGGTGGTGTTGGTTGTGTAATTGATGGGGTTCCTCCTCGGAGACCCTTATCTGAAGCTGATTTGCAAGCAGACCTTGACAGAAGGAGGCCAGGTCAGAGCCGAATTACTACCCCTAGGAAGGAAACTGACACATGCAAAATACTTTCAGGAGTCCATGAAGATTCAGGATTGACTACCGGGGCACCTATTCATGTCTTTGTACCCAATACTGATCAGAGAGGACGTGATTATGACGAAATGTCGATAGCTTATAGGCCTTCACATGCAGATCTCACATATGACTTGAAGTACGGTATCAGATCAGTGCAGGGTGGTGGTAGATCTTCAGCTAGAGAAACAATTGGAAGAGTTGCTGCAGGAGCAGTTGCGAAAAAAATCCTTAAGGACTTCTCAGGAACTGAGGTTTTTGCTTATGTTTCACAAGTCCACAAGGTCGTACTCCCAGAAGACTTGGTTGATCATTACACTCTTTCACTTGATCAGATAGAGAGTAATATGGTTAGGTGTCCAGATCCTGAATATGCAGAGAAGATGATTGCTGCTATTGATGCTGTTAGGGTGAGAGGGGAATCCATTGGTGGTGTTGTCACATGCATAATTAGAAATTGCCCGCGGGGTCTTGGTTCGCCTGTTTTTGACAAACTTGAAGCTGAACTAGCTAAAGCTTGCATGTCATTACCTGCAACAAAAGGATTTGAATTCGGAAGCGGGTTTGCAGGTACCTTTTTAACCGGGAGTGAACATAATGATGAGTTCTATGTGGATGAACAAGGACGAGTCAGGACAAGGACAAATCGCTCTGGTGGGACACAAGGAGGAATATCTAATGGGGAAATCATAAACATGAGAATAGCTTTCAAGCCAACAGCTACAATTGCTAAGAAGCAGAATACGGTGACTAGAGATAAGCATGAGACTGAACTAATAGCCCGTGGTCGCCATGATCCTTGTGTTGTCCCGCGAGCGGTTCCAATGGTGGAGGCTGGAGTGGCACTAGTGCTCGTGGATCAGTTAATGGCTCAATATGCACAATGCCATCTTTTTCCTTACAATCCGGATGTACAAGAACCTCTCTCCAAAGTGAACCCCCTTCCAACTATGTCTTTGTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004107 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009423 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010181 GO:0016053 GO:0016829 GO:0016835 GO:0016838 GO:0019438 GO:0019752 GO:0031974 GO:0031981 GO:0032553 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046417 GO:0048037 GO:0050662 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Chorismate_synt

Protein Analysis

441

Amino Acids

47.85

Weight (kDa)

8.64

Isoelectric Point (pI)

44.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Chorismate_synt	PF01264	61 - 410	1.5e-133	Chorismate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48850 AT1G48850 AT1G48850
fragaria_vesca	FvH4_7g19670 FvH4_7g19670
malus_domestica	MD01G1108900.v1.1 MD07G1175200.v1.1
prunus_persica	Prupe.2G214400_v2.0.a1 Prupe.2G214400_v2.0.a1 Prupe.2G214400_v2.0.a1
pyrus_communis	pycom07g16960
rosa_chinensis	RchiOBHm_Chr1g0363491
rosa_laevigata	RLG00000027561
rosa_multiflora	Rmu_sc0008820.1_g000005
rosa_roxburghii	Rroxscaffold_4G00293120
rosa_rugosa	Rorug01G0307400 Rorug01G0307500 Rorug01G0307600
rosa_samantha	Rh1AG316600 Rh1BG279900 Rh1CG296100 Rh1DG311200
rosa_wichuraiana	Rw1G028050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	901, 920
Acc65I	GGTACC	1 cut(s)	932
AccB1I	GGYRCC	2 cut(s)	394, 932
AccBSI	CCGCTC	1 cut(s)	1178
AccII	CGCG	2 cut(s)	826, 1174
AccIII	TCCGGA	1 cut(s)	1267
AciI	CCGC	6 cut(s)	132, 824, 826, 921, 1172, 1178
AclWI	GGATC	3 cut(s)	719, 1151, 1227
AcsI	RAATTY	1 cut(s)	911
AcuI	CTGAAG	2 cut(s)	285, 522
AfaI	GTAC	6 cut(s)	166, 414, 503, 651, 934, 1275
AfiI	CCNNNNNNNGG	4 cut(s)	35, 151, 331, 1177
AflII	CTTAAG	1 cut(s)	593
AgsI	TTSAA	5 cut(s)	48, 499, 860, 911, 1072
AhdI	GACNNNNNGTC	1 cut(s)	451
AhlI	ACTAGT	1 cut(s)	1207
AjiI	CACGTC	1 cut(s)	437
AjnI	CCWGG	2 cut(s)	144, 301
Alw21I	GWGCWC	1 cut(s)	1215
Alw26I	GTCTC	4 cut(s)	18, 210, 247, 1121
AlwI	GGATC	3 cut(s)	719, 1151, 1227
AlwNI	CAGNNNCTG	2 cut(s)	611, 728
Aor13HI	TCCGGA	1 cut(s)	1267
AoxI	GGCC	3 cut(s)	122, 299, 467
ApeKI	GCWGC	3 cut(s)	155, 566, 752
ApoI	RAATTY	1 cut(s)	911
Asp718I	GGTACC	1 cut(s)	932
AspA2I	CCTAGG	1 cut(s)	326
AspS9I	GGNCC	3 cut(s)	51, 118, 129
AsuC2I	CCSGG	2 cut(s)	391, 946
AsuHPI	GGTGA	2 cut(s)	784, 1120
AsuII	TTCGAA	1 cut(s)	85
AvaII	GGWCC	3 cut(s)	51, 118, 129
AvrII	CCTAGG	1 cut(s)	326
BaeGI	GKGCMC	1 cut(s)	397
BanI	GGYRCC	2 cut(s)	394, 932
BauI	CACGAG	1 cut(s)	1214
BbsI	GAAGAC	1 cut(s)	666
Bbv12I	GWGCWC	1 cut(s)	1215
BbvI	GCAGC	3 cut(s)	167, 553, 739
BccI	CCATC	2 cut(s)	230, 1257
BceAI	ACGGC	1 cut(s)	74
BciT130I	CCWGG	2 cut(s)	146, 303
BclI	TGATCA	3 cut(s)	424, 670, 691
BcnI	CCSGG	2 cut(s)	391, 946
BcoDI	GTCTC	4 cut(s)	18, 210, 247, 1121
BcuI	ACTAGT	1 cut(s)	1207
BfaI	CTAG	5 cut(s)	327, 543, 869, 1113, 1208
BfmI	CTRYAG	1 cut(s)	567
BfrI	CTTAAG	1 cut(s)	593
BfuAI	ACCTGC	2 cut(s)	901, 920
BglII	AGATCT	2 cut(s)	481, 533
BisI	GCNGC	3 cut(s)	156, 567, 753
BlnI	CCTAGG	1 cut(s)	326
BlsI	GCNGC	3 cut(s)	157, 568, 754
BmcAI	AGTACT	1 cut(s)	166
Bme1390I	CCNGG	4 cut(s)	146, 303, 391, 946
Bme18I	GGWCC	3 cut(s)	51, 118, 129
BmeRI	GACNNNNNGTC	1 cut(s)	451
BmgBI	CACGTC	1 cut(s)	437
BmgT120I	GGNCC	3 cut(s)	51, 118, 129
BmiI	GGNNCC	4 cut(s)	243, 396, 934, 1182
BmrFI	CCNGG	4 cut(s)	146, 303, 391, 946
BmsI	GCATC	1 cut(s)	751
BpiI	GAAGAC	1 cut(s)	666
BpmI	CTGGAG	2 cut(s)	128, 1218
Bpu14I	TTCGAA	1 cut(s)	85
BpuMI	CCSGG	2 cut(s)	391, 946
BsaI	GGTCTC	1 cut(s)	247
BsaJI	CCNNGG	6 cut(s)	125, 248, 326, 390, 824, 1144
BsaWI	WCCGGW	1 cut(s)	1267
BsaXI	ACNNNNNCTCC	4 cut(s)	80, 110, 289, 319
Bsc4I	CCNNNNNNNGG	4 cut(s)	35, 151, 331, 1177
BseAI	TCCGGA	1 cut(s)	1267
BseBI	CCWGG	2 cut(s)	146, 303
BseDI	CCNNGG	6 cut(s)	125, 248, 326, 390, 824, 1144
BseGI	GGATG	3 cut(s)	20, 982, 1276
BseLI	CCNNNNNNNGG	4 cut(s)	35, 151, 331, 1177
BseMII	CTCAG	2 cut(s)	603, 618
BseRI	GAGGAG	1 cut(s)	237
BseSI	GKGCMC	1 cut(s)	397
BseXI	GCAGC	3 cut(s)	167, 553, 739
BseYI	CCCAGC	1 cut(s)	158
BsgI	GTGCAG	2 cut(s)	170, 539
Bsh1236I	CGCG	2 cut(s)	826, 1174
BshFI	GGCC	3 cut(s)	124, 301, 469
BshNI	GGYRCC	2 cut(s)	394, 932
BsiHKAI	GWGCWC	1 cut(s)	1215
BsiSI	CCGG	4 cut(s)	121, 390, 945, 1268
BslFI	GGGAC	2 cut(s)	1033, 1154
BslI	CCNNNNNNNGG	4 cut(s)	35, 151, 331, 1177
BsmAI	GTCTC	4 cut(s)	18, 210, 247, 1121
BsmBI	CGTCTC	1 cut(s)	18
BsmFI	GGGAC	2 cut(s)	1033, 1154
BsnI	GGCC	3 cut(s)	124, 301, 469
Bso31I	GGTCTC	1 cut(s)	247
Bsp119I	TTCGAA	1 cut(s)	85
Bsp1286I	GDGCHC	2 cut(s)	397, 1215
Bsp13I	TCCGGA	1 cut(s)	1267
Bsp1407I	TGTACA	1 cut(s)	1273
Bsp143I	GATC	9 cut(s)	424, 481, 512, 533, 670, 691, 724, 1156, 1219
BspACI	CCGC	6 cut(s)	132, 824, 826, 921, 1172, 1178
BspANI	GGCC	3 cut(s)	124, 301, 469
BspCNI	CTCAG	2 cut(s)	604, 617
BspEI	TCCGGA	1 cut(s)	1267
BspFNI	CGCG	2 cut(s)	826, 1174
BspLI	GGNNCC	4 cut(s)	243, 396, 934, 1182
BspMAI	CTGCAG	1 cut(s)	571
BspMI	ACCTGC	2 cut(s)	901, 920
BspPI	GGATC	3 cut(s)	719, 1151, 1227
BspT104I	TTCGAA	1 cut(s)	85
BspT107I	GGYRCC	2 cut(s)	394, 932
BspTI	CTTAAG	1 cut(s)	593
BspTNI	GGTCTC	1 cut(s)	247
BsrBI	CCGCTC	1 cut(s)	1178
BsrGI	TGTACA	1 cut(s)	1273
BssECI	CCNNGG	6 cut(s)	125, 248, 326, 390, 824, 1144
BssMI	GATC	9 cut(s)	424, 481, 512, 533, 670, 691, 724, 1156, 1219
BssSI	CACGAG	1 cut(s)	1214
BssT1I	CCWWGG	1 cut(s)	326
Bst2BI	CACGAG	1 cut(s)	1214
Bst2UI	CCWGG	2 cut(s)	146, 303
Bst4CI	ACNGT	2 cut(s)	506, 1108
Bst6I	CTCTTC	1 cut(s)	553
BstAFI	CTTAAG	1 cut(s)	593
BstAUI	TGTACA	1 cut(s)	1273
BstBI	TTCGAA	1 cut(s)	85
BstC8I	GCNNGC	5 cut(s)	153, 279, 824, 880, 1176
BstDEI	CTNAG	3 cut(s)	604, 612, 1092
BstDSI	CCRYGG	2 cut(s)	824, 1144
BstF5I	GGATG	3 cut(s)	20, 982, 1276
BstFNI	CGCG	2 cut(s)	826, 1174
BstKTI	GATC	9 cut(s)	427, 484, 515, 536, 673, 694, 727, 1159, 1222
BstMAI	GTCTC	4 cut(s)	18, 210, 247, 1121
BstMBI	GATC	9 cut(s)	424, 481, 512, 533, 670, 691, 724, 1156, 1219
BstMWI	GCNNNNNNNGC	7 cut(s)	148, 572, 761, 869, 1088, 1202, 1238
BstNI	CCWGG	2 cut(s)	146, 303
BstNSI	RCATGY	4 cut(s)	348, 479, 807, 886
BstSCI	CCNGG	4 cut(s)	144, 301, 389, 944
BstSFI	CTRYAG	1 cut(s)	567
BstSLI	GKGCMC	1 cut(s)	397
BstUI	CGCG	2 cut(s)	826, 1174
BstV1I	GCAGC	3 cut(s)	167, 553, 739
BstV2I	GAAGAC	1 cut(s)	666
BstX2I	RGATCY	3 cut(s)	481, 533, 724
BstYI	RGATCY	3 cut(s)	481, 533, 724
BsuRI	GGCC	3 cut(s)	124, 301, 469
BtgI	CCRYGG	2 cut(s)	824, 1144
BtrI	CACGTC	1 cut(s)	437
BtsCI	GGATG	3 cut(s)	20, 982, 1276
BtsIMutI	CAGTG	1 cut(s)	522
BveI	ACCTGC	2 cut(s)	901, 920
Cac8I	GCNNGC	5 cut(s)	153, 279, 824, 880, 1176
CaiI	CAGNNNCTG	2 cut(s)	611, 728
Cfr13I	GGNCC	3 cut(s)	51, 118, 129
Cfr42I	CCGCGG	1 cut(s)	827
CpoI	CGGWCCG	1 cut(s)	129
Csp6I	GTAC	6 cut(s)	165, 413, 502, 650, 933, 1274
CspI	CGGWCCG	1 cut(s)	129
CviQI	GTAC	6 cut(s)	165, 413, 502, 650, 933, 1274
DdeI	CTNAG	3 cut(s)	604, 612, 1092
DpnI	GATC	9 cut(s)	426, 483, 514, 535, 672, 693, 726, 1158, 1221
DpnII	GATC	9 cut(s)	424, 481, 512, 533, 670, 691, 724, 1156, 1219
DriI	GACNNNNNGTC	1 cut(s)	451
Eam1104I	CTCTTC	1 cut(s)	553
Eam1105I	GACNNNNNGTC	1 cut(s)	451
EarI	CTCTTC	1 cut(s)	553
Eco130I	CCWWGG	1 cut(s)	326
Eco147I	AGGCCT	1 cut(s)	469
Eco31I	GGTCTC	1 cut(s)	247
Eco47I	GGWCC	3 cut(s)	51, 118, 129
Eco57I	CTGAAG	2 cut(s)	285, 522
EcoRI	GAATTC	1 cut(s)	911
EcoRII	CCWGG	2 cut(s)	144, 301
EcoT14I	CCWWGG	1 cut(s)	326
EcoT22I	ATGCAT	1 cut(s)	809
ErhI	CCWWGG	1 cut(s)	326
Esp3I	CGTCTC	1 cut(s)	18
FalI	AAGNNNNNCTT	2 cut(s)	270, 302
FaqI	GGGAC	2 cut(s)	1033, 1154
FauI	CCCGC	4 cut(s)	819, 831, 914, 1179
FauNDI	CATATG	1 cut(s)	490
FbaI	TGATCA	3 cut(s)	424, 670, 691
Fnu4HI	GCNGC	3 cut(s)	156, 567, 753
FokI	GGATG	3 cut(s)	7, 989, 1283
Fsp4HI	GCNGC	3 cut(s)	156, 567, 753
FspBI	CTAG	5 cut(s)	327, 543, 869, 1113, 1208
GluI	GCNGC	3 cut(s)	156, 567, 753
GsaI	CCCAGC	1 cut(s)	162
GsuI	CTGGAG	2 cut(s)	128, 1218
HaeIII	GGCC	3 cut(s)	124, 301, 469
HapII	CCGG	4 cut(s)	121, 390, 945, 1268
HindIII	AAGCTT	1 cut(s)	876
HinfI	GANTC	5 cut(s)	203, 363, 374, 782, 990
HpaII	CCGG	4 cut(s)	121, 390, 945, 1268
HphI	GGTGA	2 cut(s)	784, 1120
Hpy166II	GTNNAC	3 cut(s)	640, 953, 1297
Hpy188I	TCNGA	8 cut(s)	129, 252, 265, 309, 429, 512, 696, 917
Hpy188III	TCNNGA	7 cut(s)	360, 378, 606, 722, 728, 994, 1268
Hpy8I	GTNNAC	3 cut(s)	640, 953, 1297
HpyAV	CCTTC	4 cut(s)	288, 325, 480, 1313
HpyCH4III	ACNGT	2 cut(s)	506, 1108
HpyCH4IV	ACGT	1 cut(s)	436
HpyF10VI	GCNNNNNNNGC	7 cut(s)	148, 572, 761, 869, 1088, 1202, 1238
HpyF3I	CTNAG	3 cut(s)	604, 612, 1092
HpySE526I	ACGT	1 cut(s)	436
Kpn2I	TCCGGA	1 cut(s)	1267
KpnI	GGTACC	1 cut(s)	936
Ksp22I	TGATCA	3 cut(s)	424, 670, 691
KspI	CCGCGG	1 cut(s)	827
Kzo9I	GATC	9 cut(s)	424, 481, 512, 533, 670, 691, 724, 1156, 1219
LmnI	GCTCC	2 cut(s)	147, 572
Lsp1109I	GCAGC	3 cut(s)	167, 553, 739
LweI	GCATC	1 cut(s)	751
MaeI	CTAG	5 cut(s)	327, 543, 869, 1113, 1208
MaeII	ACGT	1 cut(s)	436
MaeIII	GTNAC	3 cut(s)	187, 799, 1108
MalI	GATC	9 cut(s)	426, 483, 514, 535, 672, 693, 726, 1158, 1221
MbiI	CCGCTC	1 cut(s)	1178
MboI	GATC	9 cut(s)	424, 481, 512, 533, 670, 691, 724, 1156, 1219
MboII	GAAGA	6 cut(s)	74, 383, 528, 570, 671, 754
MfeI	CAATTG	2 cut(s)	552, 1086
MflI	RGATCY	3 cut(s)	481, 533, 724
MhlI	GDGCHC	2 cut(s)	397, 1215
MluCI	AATT	8 cut(s)	175, 231, 315, 552, 810, 817, 911, 1086
MlyI	GAGTC	3 cut(s)	212, 372, 999
Mph1103I	ATGCAT	1 cut(s)	809
MroI	TCCGGA	1 cut(s)	1267
MseI	TTAA	3 cut(s)	594, 941, 1226
MslI	CAYNNNNRTG	3 cut(s)	213, 960, 1055
MspA1I	CMGCKG	2 cut(s)	158, 826
MspCI	CTTAAG	1 cut(s)	593
MspI	CCGG	4 cut(s)	121, 390, 945, 1268
MspR9I	CCNGG	4 cut(s)	146, 303, 391, 946
MunI	CAATTG	2 cut(s)	552, 1086
MvaI	CCWGG	2 cut(s)	146, 303
MvnI	CGCG	2 cut(s)	826, 1174
MwoI	GCNNNNNNNGC	7 cut(s)	148, 572, 761, 869, 1088, 1202, 1238
NciI	CCSGG	2 cut(s)	391, 946
NdeI	CATATG	1 cut(s)	490
NdeII	GATC	9 cut(s)	424, 481, 512, 533, 670, 691, 724, 1156, 1219
NlaIV	GGNNCC	4 cut(s)	243, 396, 934, 1182
NmuCI	GTSAC	2 cut(s)	799, 1108
NsiI	ATGCAT	1 cut(s)	809
NspI	RCATGY	4 cut(s)	348, 479, 807, 886
NspV	TTCGAA	1 cut(s)	85
PceI	AGGCCT	1 cut(s)	469
PfeI	GAWTC	2 cut(s)	374, 782
PkrI	GCNGC	3 cut(s)	157, 568, 754
PleI	GAGTC	3 cut(s)	211, 371, 998
PpsI	GAGTC	3 cut(s)	211, 371, 998
Psp6I	CCWGG	2 cut(s)	144, 301
PspFI	CCCAGC	1 cut(s)	158
PspGI	CCWGG	2 cut(s)	144, 301
PspN4I	GGNNCC	4 cut(s)	243, 396, 934, 1182
PspPI	GGNCC	3 cut(s)	51, 118, 129
PstI	CTGCAG	1 cut(s)	571
PstNI	CAGNNNCTG	2 cut(s)	611, 728
PsuI	RGATCY	3 cut(s)	481, 533, 724
PvuII	CAGCTG	1 cut(s)	158
RsaI	GTAC	6 cut(s)	166, 414, 503, 651, 934, 1275
RsaNI	GTAC	6 cut(s)	165, 413, 502, 650, 933, 1274
RseI	CAYNNNNRTG	3 cut(s)	213, 960, 1055
Rsr2I	CGGWCCG	1 cut(s)	129
RsrII	CGGWCCG	1 cut(s)	129
SacII	CCGCGG	1 cut(s)	827
SaqAI	TTAA	3 cut(s)	594, 941, 1226
SatI	GCNGC	3 cut(s)	156, 567, 753
Sau3AI	GATC	9 cut(s)	424, 481, 512, 533, 670, 691, 724, 1156, 1219
Sau96I	GGNCC	3 cut(s)	51, 118, 129
ScaI	AGTACT	1 cut(s)	166
SchI	GAGTC	3 cut(s)	212, 372, 999
ScrFI	CCNGG	4 cut(s)	146, 303, 391, 946
SduI	GDGCHC	2 cut(s)	397, 1215
SfaNI	GCATC	1 cut(s)	751
SfcI	CTRYAG	1 cut(s)	567
Sfr303I	CCGCGG	1 cut(s)	827
SfuI	TTCGAA	1 cut(s)	85
SgrBI	CCGCGG	1 cut(s)	827
SinI	GGWCC	3 cut(s)	51, 118, 129
SmiMI	CAYNNNNRTG	3 cut(s)	213, 960, 1055
SmlI	CTYRAG	1 cut(s)	593
SmoI	CTYRAG	1 cut(s)	593
SpeI	ACTAGT	1 cut(s)	1207
Sse9I	AATT	8 cut(s)	175, 231, 315, 552, 810, 817, 911, 1086
SseBI	AGGCCT	1 cut(s)	469
SsiI	CCGC	6 cut(s)	132, 824, 826, 921, 1172, 1178
SspMI	CTAG	5 cut(s)	327, 543, 869, 1113, 1208
StuI	AGGCCT	1 cut(s)	469
StyD4I	CCNGG	4 cut(s)	144, 301, 389, 944
StyI	CCWWGG	1 cut(s)	326
TaaI	ACNGT	2 cut(s)	506, 1108
TaiI	ACGT	1 cut(s)	439
TaqI	TCGA	2 cut(s)	85, 455
TaqII	GACCGA	1 cut(s)	68
TasI	AATT	8 cut(s)	175, 231, 315, 552, 810, 817, 911, 1086
TatI	WGTACW	2 cut(s)	164, 1273
TfiI	GAWTC	2 cut(s)	374, 782
Tru1I	TTAA	3 cut(s)	594, 941, 1226
Tru9I	TTAA	3 cut(s)	594, 941, 1226
TscAI	CASTG	1 cut(s)	522
TseFI	GTSAC	2 cut(s)	799, 1108
TseI	GCWGC	3 cut(s)	155, 566, 752
Tsp45I	GTSAC	2 cut(s)	799, 1108
TspDTI	ATGAA	3 cut(s)	384, 392, 993
TspGWI	ACGGA	1 cut(s)	94
TspRI	CASTG	1 cut(s)	522
Vha464I	CTTAAG	1 cut(s)	593
VpaK11BI	GGWCC	3 cut(s)	51, 118, 129
XapI	RAATTY	1 cut(s)	911
XceI	RCATGY	4 cut(s)	348, 479, 807, 886
XcmI	CCANNNNNNNNNTGG	1 cut(s)	31
XmaJI	CCTAGG	1 cut(s)	326
XspI	CTAG	5 cut(s)	327, 543, 869, 1113, 1208
ZrmI	AGTACT	1 cut(s)	166
Zsp2I	ATGCAT	1 cut(s)	809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.