RchiOBHm_Chr1g0372321

U-box domain-containing protein 62-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0006755
Physical Location & Seq
Reverse (-)
61073652 .. 61077088
3437 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1329 bp
ATGTCCTCCGAAGAACTGGGTCTCAACTCGCCGCAGCTAGTCTTCCACCAAGACGAGCCCTTGCGGTTCGGGGCACCGCCTCAGCGCCGGGTCGGGGACTCGGGTCCGGCGAAGACCCGAGAGCTCAGCGGCTTCATCGACGATCGGTTCTTCCCGCCGCAAAACGCCGACTTCCGGCGGGGATTGTACAGCGAGAACCCGGAGCGGCGGGACCCGCCGGAGCCCCGGAACTGGAATCCGAATGCGACCGCGGTGAGGACGCCGAGCGGCGAGGGATCGGACGACGATGAGGATGAGGATGACGACGACGACGACGTCGAGGACGACGATGATGACGCCGACGTCGGAGGGTTGTTCGGAGTGGAGAATAGGAGCAAGGGCAATGGTGGTAATAATGTGAGTAATGGCGAGGACAAAATGGGAAATGGGAATGTTAAGCACCAGCAGCTCCATTCTTCTTTTGGTGGGGCTCTGATATTAGGATCAAGTAGGGAGGTGTTGGAGAAAGACCATAGTGTTAGTGTAGGGCAGCAGACACTGAATAACAACAACATCAGGGACAGTCCCAGTAATAATCATCATGAGCACCTGCCAGGAAGGGTTGGGAGTTATCAGAATGCAATCACGGTGGCTGAATCATCAGACGGCGACATGTATTACTCGCAGTATTTGCAGGGCTCGGAGGGCTCTGGCGCTGCTCAGAAGGATTTGGTTGTGGAAAATGGTTGTGGGTTTAGTGGAAGAAAGGATGCTTTGTGTTCAAGTGAGTCTGGAGACTCTTTGAGGGCGATTCTCTCTGATCCTGTGACGGGAGCTCTGATGGATGACGCAATGATATTGCCTTGTGGGCATTCATTTGGAGGCGGTGGAGTACAGCAAGTTATTAGAATGAAAGCTTGCTTCACATGTTCTCAGTCAATTTCGGAAGACTCAATTGCTCCAAATCTTTCTCTTCGAAGTGCTGTGCAGGCATTCCGTCGTGAAGAAGAGTTACACTTTCATCGCTCATCCAAAAGGAAAAGAGAAAGGTTTGACCAGGACAAGGGTGGTTATGGTGATTTAGCACTCACAGATCCTCCTAGAGGTAGAGGTGTTCAGTTTCCATTTGCTGTGATGGATCGAGTTATTATAAAGGGTAATAAGAGGACACCACAACGCTTTGTTGGGCGTGAGGCAGTTGTGACAACACAATGCTTAAATGGATGGTATGTGGTAAAGACATTGGATAATGCAGAGAGTGTAAAGTTGCAGTATCGCTCACTTGCCAAGGTATCAGATGATTCATCATCCAAGGCCATGCCAAGCAAGATGGCACCTAACTGGCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
U-box

Protein Analysis

442

Amino Acids

48.32

Weight (kDa)

5.01

Isoelectric Point (pI)

55.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB62-63_C PF23112 365 - 423 5e-35 U-box protein 62/63 C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1130
AarI CACCTGC 1 cut(s) 597
AasI GACNNNNNNGTC 2 cut(s) 314, 341
AatII GACGTC 2 cut(s) 318, 345
Acc36I ACCTGC 1 cut(s) 597
AccB1I GGYRCC 2 cut(s) 73, 1312
AccBSI CCGCTC 2 cut(s) 205, 267
AccII CGCG 1 cut(s) 251
AclWI GGATC 5 cut(s) 283, 490, 794, 1067, 1125
AcyI GRCGYC 4 cut(s) 260, 315, 336, 342
AfaI GTAC 2 cut(s) 188, 873
AfiI CCNNNNNNNGG 7 cut(s) 94, 174, 231, 255, 809, 1042, 1082
AflIII ACRYGT 2 cut(s) 651, 905
AgsI TTSAA 1 cut(s) 762
AjnI CCWGG 2 cut(s) 592, 1035
AluBI AGCT 5 cut(s) 37, 124, 448, 815, 896
AluI AGCT 5 cut(s) 37, 124, 448, 815, 896
Alw21I GWGCWC 3 cut(s) 126, 588, 817
Alw26I GTCTC 2 cut(s) 26, 768
AlwI GGATC 5 cut(s) 283, 490, 794, 1067, 1125
AlwNI CAGNNNCTG 1 cut(s) 538
Ama87I CYCGRG 2 cut(s) 100, 117
AoxI GGCC 1 cut(s) 1293
ApeKI GCWGC 4 cut(s) 34, 445, 529, 695
AspLEI GCGC 2 cut(s) 87, 695
AspS9I GGNCC 2 cut(s) 104, 211
AsuC2I CCSGG 3 cut(s) 89, 200, 226
AsuHPI GGTGA 2 cut(s) 265, 1067
AsuII TTCGAA 1 cut(s) 955
AvaI CYCGRG 2 cut(s) 100, 117
AvaII GGWCC 2 cut(s) 104, 211
BaeGI GKGCMC 1 cut(s) 76
BanI GGYRCC 2 cut(s) 73, 1312
BanII GRGCYC 7 cut(s) 60, 126, 225, 472, 680, 689, 817
BarI GAAGNNNNNNTAC 2 cut(s) 975, 1007
BbsI GAAGAC 3 cut(s) 34, 119, 933
Bbv12I GWGCWC 3 cut(s) 126, 588, 817
BbvCI CCTCAGC 1 cut(s) 81
BbvI GCAGC 4 cut(s) 46, 457, 541, 682
BccI CCATC 4 cut(s) 814, 1108, 1197, 1303
BceAI ACGGC 1 cut(s) 661
BciT130I CCWGG 2 cut(s) 594, 1037
BcnI CCSGG 3 cut(s) 89, 200, 226
BcoDI GTCTC 2 cut(s) 26, 768
BfaI CTAG 2 cut(s) 38, 1080
BfoI RGCGCY 2 cut(s) 88, 696
BfuAI ACCTGC 1 cut(s) 597
BglI GCCNNNNNGGC 1 cut(s) 847
BisI GCNGC 9 cut(s) 32, 35, 130, 158, 206, 268, 446, 530, 696
BlpI GCTNAGC 1 cut(s) 125
BlsI GCNGC 9 cut(s) 33, 36, 131, 159, 207, 269, 447, 531, 697
Bme1390I CCNGG 5 cut(s) 89, 200, 226, 594, 1037
Bme18I GGWCC 2 cut(s) 104, 211
BmeT110I CYCGRG 2 cut(s) 100, 117
BmgT120I GGNCC 2 cut(s) 104, 211
BmiI GGNNCC 6 cut(s) 75, 105, 212, 213, 222, 1314
BmrFI CCNGG 5 cut(s) 89, 200, 226, 594, 1037
BmrI ACTGGG 2 cut(s) 26, 561
BmsI GCATC 1 cut(s) 739
BmuI ACTGGG 2 cut(s) 26, 561
BoxI GACNNNNGTC 1 cut(s) 102
BpiI GAAGAC 3 cut(s) 34, 119, 933
BpmI CTGGAG 1 cut(s) 792
Bpu10I CCTNAGC 1 cut(s) 81
Bpu1102I GCTNAGC 1 cut(s) 125
Bpu14I TTCGAA 1 cut(s) 955
BpuMI CCSGG 3 cut(s) 89, 200, 226
BsaHI GRCGYC 4 cut(s) 260, 315, 336, 342
BsaI GGTCTC 1 cut(s) 26
BsaJI CCNNGG 4 cut(s) 224, 249, 1266, 1290
BsaXI ACNNNNNCTCC 2 cut(s) 1060, 1090
Bsc4I CCNNNNNNNGG 7 cut(s) 94, 174, 231, 255, 809, 1042, 1082
Bse1I ACTGG 4 cut(s) 21, 236, 567, 1325
Bse3DI GCAATG 2 cut(s) 388, 837
BseBI CCWGG 2 cut(s) 594, 1037
BseDI CCNNGG 4 cut(s) 224, 249, 1266, 1290
BseGI GGATG 7 cut(s) 298, 304, 754, 829, 1007, 1208, 1286
BseLI CCNNNNNNNGG 7 cut(s) 94, 174, 231, 255, 809, 1042, 1082
BseMI GCAATG 2 cut(s) 388, 837
BseMII CTCAG 4 cut(s) 95, 139, 713, 926
BseNI ACTGG 4 cut(s) 21, 236, 567, 1325
BseSI GKGCMC 1 cut(s) 76
BseXI GCAGC 4 cut(s) 46, 457, 541, 682
BsgI GTGCAG 1 cut(s) 986
Bsh1236I CGCG 1 cut(s) 251
Bsh1285I CGRYCG 2 cut(s) 145, 249
BshFI GGCC 1 cut(s) 1295
BshNI GGYRCC 2 cut(s) 73, 1312
BsiEI CGRYCG 2 cut(s) 145, 249
BsiHKAI GWGCWC 3 cut(s) 126, 588, 817
BsiHKCI CYCGRG 2 cut(s) 100, 117
BsiSI CCGG 6 cut(s) 88, 107, 175, 200, 218, 226
BslFI GGGAC 4 cut(s) 110, 224, 549, 572
BslI CCNNNNNNNGG 7 cut(s) 94, 174, 231, 255, 809, 1042, 1082
BsmAI GTCTC 2 cut(s) 26, 768
BsmFI GGGAC 4 cut(s) 110, 224, 549, 572
BsmI GAATGC 4 cut(s) 247, 622, 850, 971
BsnI GGCC 1 cut(s) 1295
Bso31I GGTCTC 1 cut(s) 26
BsoBI CYCGRG 2 cut(s) 100, 117
Bsp119I TTCGAA 1 cut(s) 955
Bsp1286I GDGCHC 9 cut(s) 60, 76, 126, 225, 472, 588, 680, 689, 817
Bsp1407I TGTACA 1 cut(s) 186
Bsp143I GATC 6 cut(s) 142, 275, 482, 799, 1072, 1117
Bsp1720I GCTNAGC 1 cut(s) 125
BspANI GGCC 1 cut(s) 1295
BspCNI CTCAG 4 cut(s) 94, 138, 712, 925
BspFNI CGCG 1 cut(s) 251
BspHI TCATGA 1 cut(s) 580
BspLI GGNNCC 6 cut(s) 75, 105, 212, 213, 222, 1314
BspMI ACCTGC 1 cut(s) 597
BspPI GGATC 5 cut(s) 283, 490, 794, 1067, 1125
BspT104I TTCGAA 1 cut(s) 955
BspT107I GGYRCC 2 cut(s) 73, 1312
BspTNI GGTCTC 1 cut(s) 26
BsrBI CCGCTC 2 cut(s) 205, 267
BsrDI GCAATG 2 cut(s) 388, 837
BsrGI TGTACA 1 cut(s) 186
BsrI ACTGG 4 cut(s) 21, 236, 567, 1325
BssECI CCNNGG 4 cut(s) 224, 249, 1266, 1290
BssMI GATC 6 cut(s) 142, 275, 482, 799, 1072, 1117
BssNI GRCGYC 4 cut(s) 260, 315, 336, 342
BssT1I CCWWGG 2 cut(s) 1266, 1290
Bst2UI CCWGG 2 cut(s) 594, 1037
Bst4CI ACNGT 2 cut(s) 563, 628
Bst6I CTCTTC 2 cut(s) 957, 981
BstACI GRCGYC 4 cut(s) 260, 315, 336, 342
BstAPI GCANNNNNTGC 1 cut(s) 670
BstAUI TGTACA 1 cut(s) 186
BstBI TTCGAA 1 cut(s) 955
BstC8I GCNNGC 2 cut(s) 898, 969
BstDEI CTNAG 4 cut(s) 81, 125, 699, 912
BstDSI CCRYGG 1 cut(s) 249
BstENI CCTNNNNNAGG 1 cut(s) 1080
BstF5I GGATG 7 cut(s) 298, 304, 754, 829, 1007, 1208, 1286
BstFNI CGCG 1 cut(s) 251
BstH2I RGCGCY 2 cut(s) 88, 696
BstHHI GCGC 2 cut(s) 87, 695
BstKTI GATC 6 cut(s) 145, 278, 485, 802, 1075, 1120
BstMAI GTCTC 2 cut(s) 26, 768
BstMBI GATC 6 cut(s) 142, 275, 482, 799, 1072, 1117
BstMCI CGRYCG 2 cut(s) 145, 249
BstMWI GCNNNNNNNGC 6 cut(s) 214, 445, 670, 684, 847, 968
BstNI CCWGG 2 cut(s) 594, 1037
BstNSI RCATGY 2 cut(s) 655, 909
BstPAI GACNNNNGTC 1 cut(s) 102
BstSCI CCNGG 5 cut(s) 87, 198, 224, 592, 1035
BstSLI GKGCMC 1 cut(s) 76
BstUI CGCG 1 cut(s) 251
BstV1I GCAGC 4 cut(s) 46, 457, 541, 682
BstV2I GAAGAC 3 cut(s) 34, 119, 933
BstX2I RGATCY 1 cut(s) 1072
BstYI RGATCY 1 cut(s) 1072
BsuRI GGCC 1 cut(s) 1295
BtgI CCRYGG 1 cut(s) 249
BtgZI GCGATG 1 cut(s) 986
BtsCI GGATG 7 cut(s) 298, 304, 754, 829, 1007, 1208, 1286
BtsIMutI CAGTG 1 cut(s) 536
BveI ACCTGC 1 cut(s) 597
Cac8I GCNNGC 2 cut(s) 898, 969
CaiI CAGNNNCTG 1 cut(s) 538
CciI TCATGA 1 cut(s) 580
CfoI GCGC 2 cut(s) 87, 695
Cfr13I GGNCC 2 cut(s) 104, 211
Cfr42I CCGCGG 1 cut(s) 252
CseI GACGC 3 cut(s) 268, 344, 836
Csp6I GTAC 2 cut(s) 187, 872
CspCI CAANNNNNGTGG 2 cut(s) 609, 644
CviAII CATG 4 cut(s) 581, 652, 906, 1297
CviQI GTAC 2 cut(s) 187, 872
DdeI CTNAG 4 cut(s) 81, 125, 699, 912
DpnI GATC 6 cut(s) 144, 277, 484, 801, 1074, 1119
DpnII GATC 6 cut(s) 142, 275, 482, 799, 1072, 1117
DrdI GACNNNNNNGTC 2 cut(s) 314, 341
DseDI GACNNNNNNGTC 2 cut(s) 314, 341
Eam1104I CTCTTC 2 cut(s) 957, 981
EarI CTCTTC 2 cut(s) 957, 981
Ecl136II GAGCTC 2 cut(s) 124, 815
Eco130I CCWWGG 2 cut(s) 1266, 1290
Eco24I GRGCYC 7 cut(s) 60, 126, 225, 472, 680, 689, 817
Eco31I GGTCTC 1 cut(s) 26
Eco47I GGWCC 2 cut(s) 104, 211
Eco53kI GAGCTC 2 cut(s) 124, 815
Eco88I CYCGRG 2 cut(s) 100, 117
EcoICRI GAGCTC 2 cut(s) 124, 815
EcoNI CCTNNNNNAGG 1 cut(s) 1080
EcoO109I RGGNCCY 1 cut(s) 211
EcoRII CCWGG 2 cut(s) 592, 1035
EcoT14I CCWWGG 2 cut(s) 1266, 1290
EcoT38I GRGCYC 7 cut(s) 60, 126, 225, 472, 680, 689, 817
ErhI CCWWGG 2 cut(s) 1266, 1290
FaeI CATG 4 cut(s) 584, 655, 909, 1300
FaiI YATR 8 cut(s) 513, 582, 653, 907, 1053, 1130, 1209, 1298
FaqI GGGAC 4 cut(s) 110, 224, 549, 572
FatI CATG 4 cut(s) 580, 651, 905, 1296
FauI CCCGC 4 cut(s) 162, 171, 201, 222
Fnu4HI GCNGC 9 cut(s) 32, 35, 130, 158, 206, 268, 446, 530, 696
FokI GGATG 7 cut(s) 305, 311, 761, 836, 994, 1215, 1273
FriOI GRGCYC 7 cut(s) 60, 126, 225, 472, 680, 689, 817
Fsp4HI GCNGC 9 cut(s) 32, 35, 130, 158, 206, 268, 446, 530, 696
FspBI CTAG 2 cut(s) 38, 1080
GlaI GCGC 2 cut(s) 86, 694
GluI GCNGC 9 cut(s) 32, 35, 130, 158, 206, 268, 446, 530, 696
GsuI CTGGAG 1 cut(s) 792
HaeII RGCGCY 2 cut(s) 88, 696
HaeIII GGCC 1 cut(s) 1295
HapII CCGG 6 cut(s) 88, 107, 175, 200, 218, 226
HgaI GACGC 3 cut(s) 268, 344, 836
HhaI GCGC 2 cut(s) 87, 695
Hin1I GRCGYC 4 cut(s) 260, 315, 336, 342
Hin1II CATG 4 cut(s) 584, 655, 909, 1300
Hin6I GCGC 2 cut(s) 85, 693
HinP1I GCGC 2 cut(s) 85, 693
HindIII AAGCTT 1 cut(s) 894
HinfI GANTC 8 cut(s) 98, 235, 635, 767, 776, 790, 929, 1280
HpaII CCGG 6 cut(s) 88, 107, 175, 200, 218, 226
HphI GGTGA 2 cut(s) 265, 1067
Hpy188III TCNNGA 3 cut(s) 581, 771, 980
HpyAV CCTTC 2 cut(s) 591, 697
HpyCH4III ACNGT 2 cut(s) 563, 628
HpyCH4IV ACGT 2 cut(s) 315, 342
HpyCH4V TGCA 5 cut(s) 620, 673, 967, 1232, 1249
HpyF10VI GCNNNNNNNGC 6 cut(s) 214, 445, 670, 684, 847, 968
HpyF3I CTNAG 4 cut(s) 81, 125, 699, 912
HpySE526I ACGT 2 cut(s) 315, 342
Hsp92I GRCGYC 4 cut(s) 260, 315, 336, 342
Hsp92II CATG 4 cut(s) 584, 655, 909, 1300
HspAI GCGC 2 cut(s) 85, 693
KflI GGGWCCC 1 cut(s) 211
KspI CCGCGG 1 cut(s) 252
Kzo9I GATC 6 cut(s) 142, 275, 482, 799, 1072, 1117
LmnI GCTCC 6 cut(s) 202, 220, 372, 453, 812, 943
Lsp1109I GCAGC 4 cut(s) 46, 457, 541, 682
LweI GCATC 1 cut(s) 739
MaeI CTAG 2 cut(s) 38, 1080
MaeII ACGT 2 cut(s) 315, 342
MaeIII GTNAC 3 cut(s) 805, 990, 1180
MalI GATC 6 cut(s) 144, 277, 484, 801, 1074, 1119
MbiI CCGCTC 2 cut(s) 205, 267
MboI GATC 6 cut(s) 142, 275, 482, 799, 1072, 1117
MfeI CAATTG 1 cut(s) 933
MflI RGATCY 1 cut(s) 1072
MhlI GDGCHC 9 cut(s) 60, 76, 126, 225, 472, 588, 680, 689, 817
MluCI AATT 2 cut(s) 918, 933
MlyI GAGTC 4 cut(s) 92, 770, 776, 923
MmeI TCCRAC 2 cut(s) 325, 480
MseI TTAA 2 cut(s) 435, 1196
MspA1I CMGCKG 2 cut(s) 129, 251
MspI CCGG 6 cut(s) 88, 107, 175, 200, 218, 226
MspR9I CCNGG 5 cut(s) 89, 200, 226, 594, 1037
MunI CAATTG 1 cut(s) 933
Mva1269I GAATGC 4 cut(s) 247, 622, 850, 971
MvaI CCWGG 2 cut(s) 594, 1037
MvnI CGCG 1 cut(s) 251
MwoI GCNNNNNNNGC 6 cut(s) 214, 445, 670, 684, 847, 968
NciI CCSGG 3 cut(s) 89, 200, 226
NdeII GATC 6 cut(s) 142, 275, 482, 799, 1072, 1117
NlaIII CATG 4 cut(s) 584, 655, 909, 1300
NlaIV GGNNCC 6 cut(s) 75, 105, 212, 213, 222, 1314
NmeAIII GCCGAG 1 cut(s) 288
NmuCI GTSAC 2 cut(s) 805, 1180
NspI RCATGY 2 cut(s) 655, 909
NspV TTCGAA 1 cut(s) 955
PagI TCATGA 1 cut(s) 580
PaqCI CACCTGC 1 cut(s) 597
PciI ACATGT 2 cut(s) 651, 905
PcsI WCGNNNNNNNCGW 6 cut(s) 107, 309, 312, 315, 321, 324
PctI GAATGC 4 cut(s) 247, 622, 850, 971
PfeI GAWTC 4 cut(s) 235, 635, 790, 1280
PflFI GACNNNGTC 1 cut(s) 314
PkrI GCNGC 9 cut(s) 33, 36, 131, 159, 207, 269, 447, 531, 697
Ple19I CGATCG 1 cut(s) 145
PleI GAGTC 4 cut(s) 92, 770, 775, 923
PpsI GAGTC 4 cut(s) 92, 770, 775, 923
PpuMI RGGWCCY 1 cut(s) 211
PscI ACATGT 2 cut(s) 651, 905
PshAI GACNNNNGTC 1 cut(s) 102
PsiI TTATAA 1 cut(s) 1130
Psp124BI GAGCTC 2 cut(s) 126, 817
Psp5II RGGWCCY 1 cut(s) 211
Psp6I CCWGG 2 cut(s) 592, 1035
PspGI CCWGG 2 cut(s) 592, 1035
PspN4I GGNNCC 6 cut(s) 75, 105, 212, 213, 222, 1314
PspPI GGNCC 2 cut(s) 104, 211
PspPPI RGGWCCY 1 cut(s) 211
PstNI CAGNNNCTG 1 cut(s) 538
PsuI RGATCY 1 cut(s) 1072
PsyI GACNNNGTC 1 cut(s) 314
PvuI CGATCG 1 cut(s) 145
RsaI GTAC 2 cut(s) 188, 873
RsaNI GTAC 2 cut(s) 187, 872
SacI GAGCTC 2 cut(s) 126, 817
SacII CCGCGG 1 cut(s) 252
SaqAI TTAA 2 cut(s) 435, 1196
SatI GCNGC 9 cut(s) 32, 35, 130, 158, 206, 268, 446, 530, 696
Sau3AI GATC 6 cut(s) 142, 275, 482, 799, 1072, 1117
Sau96I GGNCC 2 cut(s) 104, 211
SchI GAGTC 4 cut(s) 92, 770, 776, 923
ScrFI CCNGG 5 cut(s) 89, 200, 226, 594, 1037
SduI GDGCHC 9 cut(s) 60, 76, 126, 225, 472, 588, 680, 689, 817
SfaNI GCATC 1 cut(s) 739
Sfr303I CCGCGG 1 cut(s) 252
SfuI TTCGAA 1 cut(s) 955
SgrBI CCGCGG 1 cut(s) 252
SinI GGWCC 2 cut(s) 104, 211
Sse9I AATT 2 cut(s) 918, 933
SspMI CTAG 2 cut(s) 38, 1080
SstI GAGCTC 2 cut(s) 126, 817
StyD4I CCNGG 5 cut(s) 87, 198, 224, 592, 1035
StyI CCWWGG 2 cut(s) 1266, 1290
TaaI ACNGT 2 cut(s) 563, 628
TaiI ACGT 2 cut(s) 318, 345
TaqI TCGA 4 cut(s) 138, 318, 955, 1120
TasI AATT 2 cut(s) 918, 933
TatI WGTACW 2 cut(s) 186, 871
TauI GCSGC 5 cut(s) 34, 132, 160, 208, 270
TfiI GAWTC 4 cut(s) 235, 635, 790, 1280
Tru1I TTAA 2 cut(s) 435, 1196
Tru9I TTAA 2 cut(s) 435, 1196
TscAI CASTG 1 cut(s) 543
TseFI GTSAC 2 cut(s) 805, 1180
TseI GCWGC 4 cut(s) 34, 445, 529, 695
Tsp45I GTSAC 2 cut(s) 805, 1180
TspDTI ATGAA 5 cut(s) 124, 843, 905, 989, 1272
TspGWI ACGGA 1 cut(s) 965
TspRI CASTG 1 cut(s) 543
Tth111I GACNNNGTC 1 cut(s) 314
VpaK11BI GGWCC 2 cut(s) 104, 211
XagI CCTNNNNNAGG 1 cut(s) 1080
XceI RCATGY 2 cut(s) 655, 909
XcmI CCANNNNNNNNNTGG 2 cut(s) 458, 1043
XspI CTAG 2 cut(s) 38, 1080
ZraI GACGTC 2 cut(s) 316, 343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.