RchiOBHm_Chr1g0342671

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
34492468 .. 34492797
330 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56929

Sequence Viewer

Length: 330 bp
ATGGTGTTGCTAGAATTGGTGAGGGGAAGAAGAAATTGCTTGTTTCAAAGTGGTGGCACCGGAAATGATGACACTGATGGAAATGAAAGATGTTTCAATCCAATCAGTTCGGAAGAAAGAATGGTGTACTTCCCACAACTTGCACTCCAAATGCATAAGAAAATGAGGTATATGGAACTAGCTGACCCAAGGTTAGAGGGTCGTGTGAGGAGTGAGGAGGTTGAGAAGCTAGTGAAGGGTAGCCTTGTGTTGTGTGCATGTAGGGCCAACACTGAGGCCAAGTATGACCAATGTGGTTTCTATGTTGGAAGGCAGATTACCTATAGCTGA

Protein Analysis

109

Amino Acids

12.52

Weight (kDa)

7.6

Isoelectric Point (pI)

58.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 56
AfaI GTAC 1 cut(s) 128
AgsI TTSAA 2 cut(s) 47, 97
AluBI AGCT 3 cut(s) 182, 229, 327
AluI AGCT 3 cut(s) 182, 229, 327
AoxI GGCC 2 cut(s) 264, 276
AspS9I GGNCC 1 cut(s) 264
AsuHPI GGTGA 1 cut(s) 31
BanI GGYRCC 1 cut(s) 56
BarI GAAGNNNNNNTAC 1 cut(s) 301
BccI CCATC 1 cut(s) 71
BfaI CTAG 3 cut(s) 11, 179, 230
BfmI CTRYAG 1 cut(s) 322
BmgT120I GGNCC 1 cut(s) 264
BmiI GGNNCC 1 cut(s) 58
BsaJI CCNNGG 1 cut(s) 188
BsaWI WCCGGW 1 cut(s) 59
BsaXI ACNNNNNCTCC 2 cut(s) 129, 159
BseDI CCNNGG 1 cut(s) 188
BseMII CTCAG 1 cut(s) 264
BseRI GAGGAG 2 cut(s) 223, 230
BshFI GGCC 2 cut(s) 266, 278
BshNI GGYRCC 1 cut(s) 56
BsiSI CCGG 1 cut(s) 60
BsnI GGCC 2 cut(s) 266, 278
BspANI GGCC 2 cut(s) 266, 278
BspCNI CTCAG 1 cut(s) 265
BspLI GGNNCC 1 cut(s) 58
BspT107I GGYRCC 1 cut(s) 56
BssECI CCNNGG 1 cut(s) 188
BssT1I CCWWGG 1 cut(s) 188
BstDEI CTNAG 1 cut(s) 273
BstMWI GCNNNNNNNGC 1 cut(s) 263
BstNSI RCATGY 1 cut(s) 261
BstSFI CTRYAG 1 cut(s) 322
BsuRI GGCC 2 cut(s) 266, 278
BtsIMutI CAGTG 2 cut(s) 72, 270
Cfr13I GGNCC 1 cut(s) 264
Csp6I GTAC 1 cut(s) 127
CviAII CATG 1 cut(s) 258
CviJI RGCY 6 cut(s) 182, 229, 243, 266, 278, 327
CviKI_1 RGCY 6 cut(s) 182, 229, 243, 266, 278, 327
CviQI GTAC 1 cut(s) 127
DdeI CTNAG 1 cut(s) 273
Eco130I CCWWGG 1 cut(s) 188
EcoT14I CCWWGG 1 cut(s) 188
EcoT22I ATGCAT 1 cut(s) 156
ErhI CCWWGG 1 cut(s) 188
FaeI CATG 1 cut(s) 261
FaiI YATR 7 cut(s) 156, 171, 173, 259, 285, 303, 324
FatI CATG 1 cut(s) 257
FspBI CTAG 3 cut(s) 11, 179, 230
HaeIII GGCC 2 cut(s) 266, 278
HapII CCGG 1 cut(s) 60
Hin1II CATG 1 cut(s) 261
HpaII CCGG 1 cut(s) 60
HphI GGTGA 1 cut(s) 31
Hpy166II GTNNAC 1 cut(s) 127
Hpy188I TCNGA 1 cut(s) 112
Hpy8I GTNNAC 1 cut(s) 127
HpyAV CCTTC 2 cut(s) 229, 303
HpyCH4V TGCA 3 cut(s) 143, 154, 257
HpyF10VI GCNNNNNNNGC 1 cut(s) 263
HpyF3I CTNAG 1 cut(s) 273
Hsp92II CATG 1 cut(s) 261
LpnPI CCDG 1 cut(s) 73
MaeI CTAG 3 cut(s) 11, 179, 230
MboII GAAGA 3 cut(s) 39, 42, 125
MluCI AATT 2 cut(s) 14, 34
MmeI TCCRAC 1 cut(s) 286
MnlI CCTC 7 cut(s) 15, 159, 190, 201, 208, 211, 268
Mph1103I ATGCAT 1 cut(s) 156
MspI CCGG 1 cut(s) 60
MwoI GCNNNNNNNGC 1 cut(s) 263
NlaIII CATG 1 cut(s) 261
NlaIV GGNNCC 1 cut(s) 58
NsiI ATGCAT 1 cut(s) 156
NspI RCATGY 1 cut(s) 261
PspN4I GGNNCC 1 cut(s) 58
PspPI GGNCC 1 cut(s) 264
RsaI GTAC 1 cut(s) 128
RsaNI GTAC 1 cut(s) 127
Sau96I GGNCC 1 cut(s) 264
SetI ASST 7 cut(s) 170, 184, 194, 222, 231, 323, 329
SfcI CTRYAG 1 cut(s) 322
Sse9I AATT 2 cut(s) 14, 34
SspMI CTAG 3 cut(s) 11, 179, 230
StyI CCWWGG 1 cut(s) 188
TasI AATT 2 cut(s) 14, 34
TatI WGTACW 1 cut(s) 126
TscAI CASTG 2 cut(s) 79, 277
TspDTI ATGAA 1 cut(s) 99
TspRI CASTG 2 cut(s) 79, 277
XceI RCATGY 1 cut(s) 261
XspI CTAG 3 cut(s) 11, 179, 230
Zsp2I ATGCAT 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.