RchiOBHm_Chr7g0227411

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
50648117 .. 50648890
774 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20368

Sequence Viewer

Length: 423 bp
ATGGTGTTGCTAGAATTGGTGAGGGGAAGAAGAAATTGCTTGTTTCAAAGTAGTGGCACAGGAAATGATGACACTGATGGAAATGAAAAATGTTTCAATTCAATCAGTTCGGAAGAAAGAATGGTGTACTTCCCACAACTTGCACTCCAAATGCATAAGAAAATGAGGTATATGGAACTAGCTGACCCAAGGTTAGAGGGTCGTGTGAGGAGTGAGGAGGTTGAGAAGCTAGTGAGGGTAGCCTTGTGTTGTGTGCATGTAGGGCCAACACTGAGGCCAAGTATGGCTAATGTGGTAGCCATGTTGGAAGGCAGATTACCTATAGCTGAGCCTAGGATTGAAGCATTAGAATTTTTGCGGTCCTATGGTGGAAATGTCTCAGAGGCATCCAGCAAGCTAACAAAAGTGGGATGTGCAGAATAA

Protein Analysis

140

Amino Acids

15.66

Weight (kDa)

6.74

Isoelectric Point (pI)

55.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 358
AcsI RAATTY 1 cut(s) 350
AfaI GTAC 1 cut(s) 128
AgsI TTSAA 4 cut(s) 47, 97, 102, 341
AluBI AGCT 4 cut(s) 182, 229, 326, 397
AluI AGCT 4 cut(s) 182, 229, 326, 397
Alw26I GTCTC 1 cut(s) 382
AoxI GGCC 2 cut(s) 263, 275
ApoI RAATTY 1 cut(s) 350
AspA2I CCTAGG 1 cut(s) 332
AspS9I GGNCC 2 cut(s) 263, 360
AsuHPI GGTGA 1 cut(s) 31
AvaII GGWCC 1 cut(s) 360
AvrII CCTAGG 1 cut(s) 332
BarI GAAGNNNNNNTAC 2 cut(s) 300, 332
BccI CCATC 1 cut(s) 71
BcoDI GTCTC 1 cut(s) 382
BfaI CTAG 4 cut(s) 11, 179, 230, 333
BfmI CTRYAG 1 cut(s) 321
BlnI CCTAGG 1 cut(s) 332
BlpI GCTNAGC 1 cut(s) 327
Bme18I GGWCC 1 cut(s) 360
BmgT120I GGNCC 2 cut(s) 263, 360
BmsI GCATC 1 cut(s) 395
Bpu1102I GCTNAGC 1 cut(s) 327
BsaJI CCNNGG 2 cut(s) 188, 332
BsaXI ACNNNNNCTCC 2 cut(s) 129, 159
BseDI CCNNGG 2 cut(s) 188, 332
BseGI GGATG 2 cut(s) 386, 416
BseMII CTCAG 3 cut(s) 263, 318, 393
BseRI GAGGAG 2 cut(s) 223, 230
BshFI GGCC 2 cut(s) 265, 277
BsmAI GTCTC 1 cut(s) 382
BsnI GGCC 2 cut(s) 265, 277
Bsp1720I GCTNAGC 1 cut(s) 327
BspACI CCGC 1 cut(s) 358
BspANI GGCC 2 cut(s) 265, 277
BspCNI CTCAG 3 cut(s) 264, 319, 392
BssECI CCNNGG 2 cut(s) 188, 332
BssT1I CCWWGG 2 cut(s) 188, 332
BstC8I GCNNGC 1 cut(s) 395
BstDEI CTNAG 3 cut(s) 272, 327, 379
BstF5I GGATG 2 cut(s) 386, 416
BstMAI GTCTC 1 cut(s) 382
BstMWI GCNNNNNNNGC 1 cut(s) 262
BstNSI RCATGY 1 cut(s) 260
BstSFI CTRYAG 1 cut(s) 321
BsuRI GGCC 2 cut(s) 265, 277
BtsCI GGATG 2 cut(s) 386, 416
BtsIMutI CAGTG 2 cut(s) 72, 269
Cac8I GCNNGC 1 cut(s) 395
Cfr13I GGNCC 2 cut(s) 263, 360
Csp6I GTAC 1 cut(s) 127
CviAII CATG 2 cut(s) 257, 301
CviQI GTAC 1 cut(s) 127
DdeI CTNAG 3 cut(s) 272, 327, 379
Eco130I CCWWGG 2 cut(s) 188, 332
Eco47I GGWCC 1 cut(s) 360
EcoT14I CCWWGG 2 cut(s) 188, 332
EcoT22I ATGCAT 1 cut(s) 156
ErhI CCWWGG 2 cut(s) 188, 332
FaeI CATG 2 cut(s) 260, 304
FaiI YATR 8 cut(s) 156, 171, 173, 258, 284, 302, 323, 366
FatI CATG 2 cut(s) 256, 300
FokI GGATG 1 cut(s) 373
FspBI CTAG 4 cut(s) 11, 179, 230, 333
HaeIII GGCC 2 cut(s) 265, 277
Hin1II CATG 2 cut(s) 260, 304
HphI GGTGA 1 cut(s) 31
Hpy166II GTNNAC 1 cut(s) 127
Hpy188I TCNGA 2 cut(s) 112, 382
Hpy8I GTNNAC 1 cut(s) 127
HpyAV CCTTC 1 cut(s) 302
HpyCH4V TGCA 4 cut(s) 143, 154, 256, 416
HpyF10VI GCNNNNNNNGC 1 cut(s) 262
HpyF3I CTNAG 3 cut(s) 272, 327, 379
Hsp92II CATG 2 cut(s) 260, 304
LpnPI CCDG 2 cut(s) 45, 403
LweI GCATC 1 cut(s) 395
MaeI CTAG 4 cut(s) 11, 179, 230, 333
MboII GAAGA 3 cut(s) 39, 42, 125
MluCI AATT 4 cut(s) 14, 34, 97, 350
MmeI TCCRAC 1 cut(s) 285
MnlI CCTC 9 cut(s) 15, 159, 190, 201, 208, 211, 228, 267, 376
Mph1103I ATGCAT 1 cut(s) 156
MwoI GCNNNNNNNGC 1 cut(s) 262
NlaIII CATG 2 cut(s) 260, 304
NsiI ATGCAT 1 cut(s) 156
NspI RCATGY 1 cut(s) 260
PspPI GGNCC 2 cut(s) 263, 360
RsaI GTAC 1 cut(s) 128
RsaNI GTAC 1 cut(s) 127
Sau96I GGNCC 2 cut(s) 263, 360
SetI ASST 8 cut(s) 170, 184, 194, 222, 231, 322, 328, 399
SfaNI GCATC 1 cut(s) 395
SfcI CTRYAG 1 cut(s) 321
SinI GGWCC 1 cut(s) 360
Sse9I AATT 4 cut(s) 14, 34, 97, 350
SsiI CCGC 1 cut(s) 358
SspMI CTAG 4 cut(s) 11, 179, 230, 333
StyI CCWWGG 2 cut(s) 188, 332
TasI AATT 4 cut(s) 14, 34, 97, 350
TatI WGTACW 1 cut(s) 126
TscAI CASTG 2 cut(s) 79, 276
TspDTI ATGAA 1 cut(s) 99
TspRI CASTG 2 cut(s) 79, 276
VpaK11BI GGWCC 1 cut(s) 360
XapI RAATTY 1 cut(s) 350
XceI RCATGY 1 cut(s) 260
XmaJI CCTAGG 1 cut(s) 332
XspI CTAG 4 cut(s) 11, 179, 230, 333
Zsp2I ATGCAT 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.