Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010764

Physical Location & Seq

Genomic Coordinates Reverse (-)

56176466 .. 56180272

Gene Structure 3807 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58987

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGTCTTCCCCGATCGAACAAGGTGAGAGAGATATAGAGAAGGGTTTGATGACGACTCCAGCGGACCCATCACCTACGCCGTCGCCGTCATCGACGGCATCGGCGCCGGCGCTGGTGCTGTCGAACTCCGGGAAGAGGATGGACCAGGCGGGGAAGAAGAAGTATGTGAAGCAGGTGACCGGGCGGCACAACGACACCGAGCTCCACCTGGCGGCGCAGAAGGGCGATCTGGCAGCCGTGAAGCAGATTCTGCGTGATATTGTTTCGCAGGTGGAGGGGACGGTGAGCGGCGCTGAGTTGGATTCGGAGGTGGCGGAGGTGAGGGCGGCGGTGGTGAATGATGTGAATGAGCTGGGGGAGACGGCGTTGTTCACGGCGGCGGATAGAGGGCATCTGGATGTGGTGAAGGAGTTGTTGAAGTATTCGAATAAGGAGAGTTTTGTGAAGAAGAATCGGTCCGGGTATAGTCCCTTGCATATTGCTGCAACTCATGGCCACCATGCCATTGTTCAGGTACTCCTGGATCAAGACCCCGGGCTAAGCAGGACAACGGGCCCGTCGAATGCTACCCCACTTATATCTGCAGCTCAAAGAGGGCATATAGCTGTGGTTGATGAACTGTTGTCAAAGGATTCTACCTTGTTGGAGATTTCAAGATCAAATGGGAAGAATGCATTACATCTGGCTGCAAGACCAGGGCATGTGGAGATTGTAAGAGCATTGCTAAATAGGGATCCACAATTGGCACGAAGGACTGACAAGAAAGGGCAAACTGCCTTGCATATGGCTGTTAAAGGGACAAGCTGTGAGGTGGTGAAATTGCTTCTTGATGCAGATGCTGCAATTGTGATGCTTCCTGACAAATTTGGTAACACAGCATTACATGTAGCCACCAGGAAGAAGCGAGCGGAGATAGTGAACGAGTTGTTATCCCTCCCAGACAGCAATGTTAATGCACTGAATAGGGACCACAAAACCGCTCTGGACATTGCTGAAGAGCTTCCACTTTCAGAAGAATCAGCAGATGTAAAGGCTTGCCTTTACAAATACGGTGCTGTTAGAGCTAACGAACTGAACCAACCAAGGGATGAACTGAGAAAAACAGTGACTCAGATCAAGAATGATGTTCATATCCAGCTTGAACAAACAAAGAAAACCAATAAAAATGTTCAGAATATTTCGAAAGACCTCAGGAAGCTCCACAGGGAAGGAATCAACAATGCCACCAACTCAGTCACAGTGGTGGCTGTTCTATTTGCAACAGTTGCTTTTGCAGCTATATTTACTGTGCCCGGCGGTGATAACAATGATGGGACGGCTGTGGTAGTGCACTCTTCTCCATTCAAAATCTTCTTCATTTTTAATGCCATTGCTCTTTTTACATCTCTGGCCGTTGTGGTGGTTCAAATTACATTGGTCAGAGGTGAGACAAAAGCAGAGAAAAAGGTCGTAGAAATTATCAATAAGTTGATGTGGCTCGCGTCAGTGTGCACTTCAGTGGCATTCATGGCCTCCTCTTACATTGTGGTTGGCCGGCATCATAAGTGGGCTGCAATTCTGGTAACAGTTGTTGGGGGAATGATAATGGCAGTGGTTCTTGGCACCATGACATATTATGTGGTGAAGTCAAAGCGGCACCGGGCCTTGAGGAAGAAGGATAAGAGCGCAAGGAGGAGTGGATCCAACTCGTGGATGCCCTCAGACTACTCCAATTCAGAAATTGATCGAATCTATGCCCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008104 GO:0008150 GO:0009628 GO:0009651 GO:0009987 GO:0016020 GO:0023052 GO:0033036 GO:0034613 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051641 GO:0051716 GO:0065007 GO:0070727 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 PGG

Protein Analysis

580

Amino Acids

63.04

Weight (kDa)

9.36

Isoelectric Point (pI)

39.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	68 - 176	3.7e-16	Ankyrin repeats (3 copies)
Ank_KRIT1	PF24521	119 - 211	9.4e-07	KRIT1 ankyrin-repeats domain
Ank_4	PF13637	123 - 174	4.8e-08	Ankyrin repeats (many copies)
Ank_2	PF12796	187 - 245	1.6e-10	Ankyrin repeats (3 copies)
Ank_2	PF12796	192 - 280	1.2e-16	Ankyrin repeats (3 copies)
Ank_4	PF13637	226 - 276	1.1e-09	Ankyrin repeats (many copies)
Ank_2	PF12796	251 - 318	1.9e-11	Ankyrin repeats (3 copies)
Ank_2	PF12796	270 - 331	6.5e-06	Ankyrin repeats (3 copies)
Ank_5	PF13857	275 - 331	4.7e-07	Ankyrin repeats (many copies)
PGG	PF13962	403 - 509	6.5e-29	Domain of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12360 AT3G12360
fragaria_vesca	FvH4_7g20900
malus_domestica	MD01G1118500.v1.1 MD07G1186700.v1.1
prunus_persica	Prupe.2G225600_v2.0.a1
pyrus_communis	pycom01g14570
rosa_chinensis	RchiOBHm_Chr1g0365211
rosa_laevigata	RLG00000027438
rosa_multiflora	Rmu_co8385283.1_g000001 Rmu_sc0008035.1_g000005 Rmu_sc0024070.1_g000002
rosa_roxburghii	Rroxscaffold_4G00291370 Rroxscaffold_4G00291910
rosa_rugosa	Rorug01G0320300
rosa_samantha	Rh1AG329300 Rh1BG290700 Rh1CG307600 Rh1DG322400
rosa_wichuraiana	Rw1G029200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	163, 259
Acc36I	ACCTGC	2 cut(s)	163, 259
AccB1I	GGYRCC	3 cut(s)	103, 1601, 1635
AccB7I	CCANNNNNTGG	1 cut(s)	1689
AccBSI	CCGCTC	3 cut(s)	288, 908, 980
AccII	CGCG	1 cut(s)	1481
AclWI	GGATC	5 cut(s)	531, 728, 741, 1674, 1687
AcoI	YGGCCR	3 cut(s)	493, 1389, 1531
AcsI	RAATTY	1 cut(s)	863
AcuI	CTGAAG	2 cut(s)	1014, 1479
AcyI	GRCGYC	1 cut(s)	104
AfaI	GTAC	1 cut(s)	516
AfiI	CCNNNNNNNGG	4 cut(s)	135, 211, 1084, 1689
AflIII	ACRYGT	1 cut(s)	883
AgsI	TTSAA	5 cut(s)	418, 654, 1142, 1345, 1406
AjnI	CCWGG	5 cut(s)	144, 207, 519, 694, 893
AleI	CACNNNNGTG	2 cut(s)	1241, 1496
Alw21I	GWGCWC	3 cut(s)	204, 1332, 1493
Alw26I	GTCTC	2 cut(s)	353, 1421
Alw44I	GTGCAC	2 cut(s)	1328, 1489
AlwI	GGATC	5 cut(s)	531, 728, 741, 1674, 1687
AlwNI	CAGNNNCTG	2 cut(s)	250, 839
Ama87I	CYCGRG	1 cut(s)	533
AoxI	GGCC	6 cut(s)	493, 553, 1389, 1509, 1531, 1641
ApaI	GGGCCC	1 cut(s)	557
ApaLI	GTGCAC	2 cut(s)	1328, 1489
ApeKI	GCWGC	7 cut(s)	233, 482, 584, 686, 839, 1274, 1550
ApoI	RAATTY	1 cut(s)	863
Asp700I	GAANNNNTTC	1 cut(s)	999
AspLEI	GCGC	5 cut(s)	106, 112, 217, 293, 1667
AspS9I	GGNCC	7 cut(s)	64, 142, 456, 553, 554, 967, 1641
AsuC2I	CCSGG	7 cut(s)	130, 181, 460, 534, 535, 1293, 1640
AsuII	TTCGAA	2 cut(s)	425, 1181
AvaI	CYCGRG	1 cut(s)	533
AvaII	GGWCC	4 cut(s)	64, 142, 456, 967
AxyI	CCTNAGG	1 cut(s)	1190
BaeGI	GKGCMC	4 cut(s)	557, 1293, 1332, 1493
BalI	TGGCCA	1 cut(s)	495
BamHI	GGATCC	2 cut(s)	733, 1679
BanI	GGYRCC	3 cut(s)	103, 1601, 1635
BanII	GRGCYC	2 cut(s)	204, 557
BauI	CACGAG	1 cut(s)	1687
Bbv12I	GWGCWC	3 cut(s)	204, 1332, 1493
BbvI	GCAGC	7 cut(s)	245, 469, 596, 673, 826, 1286, 1537
BccI	CCATC	3 cut(s)	76, 133, 1304
BceAI	ACGGC	8 cut(s)	64, 70, 111, 221, 378, 390, 1332, 1376
BciT130I	CCWGG	5 cut(s)	146, 209, 521, 696, 895
BcnI	CCSGG	7 cut(s)	130, 181, 460, 534, 535, 1293, 1640
BcoDI	GTCTC	2 cut(s)	353, 1421
BfmI	CTRYAG	1 cut(s)	582
BfoI	RGCGCY	3 cut(s)	107, 113, 294
BfuAI	ACCTGC	2 cut(s)	163, 259
BlpI	GCTNAGC	1 cut(s)	539
Bme18I	GGWCC	4 cut(s)	64, 142, 456, 967
BmeT110I	CYCGRG	1 cut(s)	533
BmgT120I	GGNCC	7 cut(s)	64, 142, 456, 553, 554, 967, 1641
BmiI	GGNNCC	8 cut(s)	66, 105, 555, 735, 968, 1603, 1637, 1681
BmsI	GCATC	7 cut(s)	107, 400, 820, 826, 840, 1546, 1683
BpmI	CTGGAG	1 cut(s)	42
Bpu1102I	GCTNAGC	1 cut(s)	539
Bpu14I	TTCGAA	2 cut(s)	425, 1181
BpuEI	CTTGAG	1 cut(s)	1666
BpuMI	CCSGG	7 cut(s)	130, 181, 460, 534, 535, 1293, 1640
BsaHI	GRCGYC	1 cut(s)	104
BsaJI	CCNNGG	4 cut(s)	532, 533, 695, 1082
BsaXI	ACNNNNNCTCC	2 cut(s)	350, 380
Bsc4I	CCNNNNNNNGG	4 cut(s)	135, 211, 1084, 1689
Bse118I	RCCGGY	2 cut(s)	106, 1533
Bse21I	CCTNAGG	1 cut(s)	1190
Bse3DI	GCAATG	4 cut(s)	719, 952, 987, 1368
BseBI	CCWGG	5 cut(s)	146, 209, 521, 696, 895
BseDI	CCNNGG	4 cut(s)	532, 533, 695, 1082
BseGI	GGATG	4 cut(s)	144, 403, 1093, 1698
BseLI	CCNNNNNNNGG	4 cut(s)	135, 211, 1084, 1689
BseMI	GCAATG	4 cut(s)	719, 952, 987, 1368
BseMII	CTCAG	6 cut(s)	285, 1085, 1124, 1204, 1245, 1713
BseRI	GAGGAG	2 cut(s)	1504, 1687
BseSI	GKGCMC	4 cut(s)	557, 1293, 1332, 1493
BseXI	GCAGC	7 cut(s)	245, 469, 596, 673, 826, 1286, 1537
BseYI	CCCAGC	1 cut(s)	352
Bsh1236I	CGCG	1 cut(s)	1481
Bsh1285I	CGRYCG	1 cut(s)	15
BshFI	GGCC	6 cut(s)	495, 555, 1391, 1511, 1533, 1643
BshNI	GGYRCC	3 cut(s)	103, 1601, 1635
BsiEI	CGRYCG	1 cut(s)	15
BsiHKAI	GWGCWC	3 cut(s)	204, 1332, 1493
BsiHKCI	CYCGRG	1 cut(s)	533
BsiSI	CCGG	8 cut(s)	107, 129, 180, 459, 534, 1293, 1534, 1639
BslFI	GGGAC	5 cut(s)	292, 453, 811, 980, 1327
BslI	CCNNNNNNNGG	4 cut(s)	135, 211, 1084, 1689
BsmAI	GTCTC	2 cut(s)	353, 1421
BsmBI	CGTCTC	1 cut(s)	353
BsmFI	GGGAC	5 cut(s)	292, 453, 811, 980, 1327
BsmI	GAATGC	3 cut(s)	568, 676, 1502
BsnI	GGCC	6 cut(s)	495, 555, 1391, 1511, 1533, 1643
BsoBI	CYCGRG	1 cut(s)	533
Bsp119I	TTCGAA	2 cut(s)	425, 1181
Bsp120I	GGGCCC	1 cut(s)	553
Bsp1286I	GDGCHC	5 cut(s)	204, 557, 1293, 1332, 1493
Bsp143I	GATC	8 cut(s)	12, 226, 523, 656, 733, 1113, 1679, 1723
Bsp1720I	GCTNAGC	1 cut(s)	539
BspANI	GGCC	6 cut(s)	495, 555, 1391, 1511, 1533, 1643
BspCNI	CTCAG	6 cut(s)	286, 1086, 1123, 1203, 1244, 1712
BspFNI	CGCG	1 cut(s)	1481
BspLI	GGNNCC	8 cut(s)	66, 105, 555, 735, 968, 1603, 1637, 1681
BspMAI	CTGCAG	1 cut(s)	586
BspMI	ACCTGC	2 cut(s)	163, 259
BspPI	GGATC	5 cut(s)	531, 728, 741, 1674, 1687
BspQI	GCTCTTC	1 cut(s)	990
BspT104I	TTCGAA	2 cut(s)	425, 1181
BspT107I	GGYRCC	3 cut(s)	103, 1601, 1635
BsrBI	CCGCTC	3 cut(s)	288, 908, 980
BsrDI	GCAATG	4 cut(s)	719, 952, 987, 1368
BsrFI	RCCGGY	2 cut(s)	106, 1533
BssAI	RCCGGY	2 cut(s)	106, 1533
BssECI	CCNNGG	4 cut(s)	532, 533, 695, 1082
BssMI	GATC	8 cut(s)	12, 226, 523, 656, 733, 1113, 1679, 1723
BssNI	GRCGYC	1 cut(s)	104
BssSI	CACGAG	1 cut(s)	1687
BssT1I	CCWWGG	1 cut(s)	1082
Bst2BI	CACGAG	1 cut(s)	1687
Bst2UI	CCWGG	5 cut(s)	146, 209, 521, 696, 895
Bst4CI	ACNGT	8 cut(s)	283, 621, 1052, 1105, 1240, 1264, 1288, 1567
Bst6I	CTCTTC	3 cut(s)	128, 990, 1339
BstACI	GRCGYC	1 cut(s)	104
BstAPI	GCANNNNNTGC	3 cut(s)	250, 839, 1265
BstBI	TTCGAA	2 cut(s)	425, 1181
BstC8I	GCNNGC	5 cut(s)	108, 906, 1036, 1479, 1535
BstDEI	CTNAG	7 cut(s)	294, 539, 1094, 1110, 1190, 1231, 1699
BstEII	GGTNACC	1 cut(s)	175
BstF5I	GGATG	4 cut(s)	144, 403, 1093, 1698
BstFNI	CGCG	1 cut(s)	1481
BstH2I	RGCGCY	3 cut(s)	107, 113, 294
BstHHI	GCGC	5 cut(s)	106, 112, 217, 293, 1667
BstKTI	GATC	8 cut(s)	15, 229, 526, 659, 736, 1116, 1682, 1726
BstMAI	GTCTC	2 cut(s)	353, 1421
BstMBI	GATC	8 cut(s)	12, 226, 523, 656, 733, 1113, 1679, 1723
BstMCI	CGRYCG	1 cut(s)	15
BstMWI	GCNNNNNNNGC	6 cut(s)	250, 839, 1061, 1265, 1274, 1508
BstNI	CCWGG	5 cut(s)	146, 209, 521, 696, 895
BstNSI	RCATGY	2 cut(s)	704, 887
BstPI	GGTNACC	1 cut(s)	175
BstSFI	CTRYAG	1 cut(s)	582
BstSLI	GKGCMC	4 cut(s)	557, 1293, 1332, 1493
BstUI	CGCG	1 cut(s)	1481
BstV1I	GCAGC	7 cut(s)	245, 469, 596, 673, 826, 1286, 1537
BstX2I	RGATCY	2 cut(s)	733, 1679
BstYI	RGATCY	2 cut(s)	733, 1679
Bsu36I	CCTNAGG	1 cut(s)	1190
BsuRI	GGCC	6 cut(s)	495, 555, 1391, 1511, 1533, 1643
BtsCI	GGATG	4 cut(s)	144, 403, 1093, 1698
BtsI	GCAGTG	1 cut(s)	1596
BtsIMutI	CAGTG	6 cut(s)	956, 1110, 1245, 1491, 1503, 1596
BveI	ACCTGC	2 cut(s)	163, 259
Cac8I	GCNNGC	5 cut(s)	108, 906, 1036, 1479, 1535
CaiI	CAGNNNCTG	2 cut(s)	250, 839
CfoI	GCGC	5 cut(s)	106, 112, 217, 293, 1667
Cfr10I	RCCGGY	2 cut(s)	106, 1533
Cfr13I	GGNCC	7 cut(s)	64, 142, 456, 553, 554, 967, 1641
Cfr9I	CCCGGG	1 cut(s)	533
CpoI	CGGWCCG	1 cut(s)	456
CseI	GACGC	1 cut(s)	1470
Csp6I	GTAC	1 cut(s)	515
CspI	CGGWCCG	1 cut(s)	456
CviAII	CATG	6 cut(s)	491, 500, 701, 884, 1507, 1606
CviQI	GTAC	1 cut(s)	515
DdeI	CTNAG	7 cut(s)	294, 539, 1094, 1110, 1190, 1231, 1699
DinI	GGCGCC	1 cut(s)	105
DpnI	GATC	8 cut(s)	14, 228, 525, 658, 735, 1115, 1681, 1725
DpnII	GATC	8 cut(s)	12, 226, 523, 656, 733, 1113, 1679, 1723
EaeI	YGGCCR	3 cut(s)	493, 1389, 1531
Eam1104I	CTCTTC	3 cut(s)	128, 990, 1339
EarI	CTCTTC	3 cut(s)	128, 990, 1339
EciI	GGCGGA	2 cut(s)	329, 395
Ecl136II	GAGCTC	1 cut(s)	202
Eco130I	CCWWGG	1 cut(s)	1082
Eco24I	GRGCYC	2 cut(s)	204, 557
Eco47I	GGWCC	4 cut(s)	64, 142, 456, 967
Eco53kI	GAGCTC	1 cut(s)	202
Eco57I	CTGAAG	2 cut(s)	1014, 1479
Eco81I	CCTNAGG	1 cut(s)	1190
Eco88I	CYCGRG	1 cut(s)	533
Eco91I	GGTNACC	1 cut(s)	175
EcoICRI	GAGCTC	1 cut(s)	202
EcoO65I	GGTNACC	1 cut(s)	175
EcoRII	CCWGG	5 cut(s)	144, 207, 519, 694, 893
EcoT14I	CCWWGG	1 cut(s)	1082
EcoT22I	ATGCAT	1 cut(s)	676
EcoT38I	GRGCYC	2 cut(s)	204, 557
EgeI	GGCGCC	1 cut(s)	105
EheI	GGCGCC	1 cut(s)	105
ErhI	CCWWGG	1 cut(s)	1082
Esp3I	CGTCTC	1 cut(s)	353
FaeI	CATG	6 cut(s)	494, 503, 704, 887, 1510, 1609
FaqI	GGGAC	5 cut(s)	292, 453, 811, 980, 1327
FatI	CATG	6 cut(s)	490, 499, 700, 883, 1506, 1605
FauI	CCCGC	1 cut(s)	142
FauNDI	CATATG	1 cut(s)	783
FokI	GGATG	4 cut(s)	151, 410, 1100, 1705
FriOI	GRGCYC	2 cut(s)	204, 557
GlaI	GCGC	5 cut(s)	105, 111, 216, 292, 1666
GsaI	CCCAGC	1 cut(s)	356
GsuI	CTGGAG	1 cut(s)	42
HaeII	RGCGCY	3 cut(s)	107, 113, 294
HaeIII	GGCC	6 cut(s)	495, 555, 1391, 1511, 1533, 1643
HapII	CCGG	8 cut(s)	107, 129, 180, 459, 534, 1293, 1534, 1639
HgaI	GACGC	1 cut(s)	1470
HhaI	GCGC	5 cut(s)	106, 112, 217, 293, 1667
Hin1I	GRCGYC	1 cut(s)	104
Hin1II	CATG	6 cut(s)	494, 503, 704, 887, 1510, 1609
Hin6I	GCGC	5 cut(s)	104, 110, 215, 291, 1665
HinP1I	GCGC	5 cut(s)	104, 110, 215, 291, 1665
HinfI	GANTC	9 cut(s)	55, 247, 302, 451, 632, 1016, 1108, 1212, 1728
HpaII	CCGG	8 cut(s)	107, 129, 180, 459, 534, 1293, 1534, 1639
Hpy166II	GTNNAC	4 cut(s)	372, 919, 1330, 1491
Hpy188I	TCNGA	7 cut(s)	307, 1012, 1113, 1173, 1421, 1702, 1717
Hpy188III	TCNNGA	8 cut(s)	395, 527, 654, 827, 857, 983, 1117, 1192
Hpy8I	GTNNAC	4 cut(s)	372, 919, 1330, 1491
Hpy99I	CGWCG	3 cut(s)	85, 97, 562
HpyAV	CCTTC	6 cut(s)	34, 214, 400, 744, 1202, 1648
HpyCH4III	ACNGT	8 cut(s)	283, 621, 1052, 1105, 1240, 1264, 1288, 1567
HpyF10VI	GCNNNNNNNGC	6 cut(s)	250, 839, 1061, 1265, 1274, 1508
HpyF3I	CTNAG	7 cut(s)	294, 539, 1094, 1110, 1190, 1231, 1699
Hsp92I	GRCGYC	1 cut(s)	104
Hsp92II	CATG	6 cut(s)	494, 503, 704, 887, 1510, 1609
HspAI	GCGC	5 cut(s)	104, 110, 215, 291, 1665
KasI	GGCGCC	1 cut(s)	103
KroI	GCCGGC	2 cut(s)	106, 1533
KroNI	GCCGGC	2 cut(s)	108, 1535
Kzo9I	GATC	8 cut(s)	12, 226, 523, 656, 733, 1113, 1679, 1723
LguI	GCTCTTC	1 cut(s)	990
LmnI	GCTCC	2 cut(s)	207, 1203
Lsp1109I	GCAGC	7 cut(s)	245, 469, 596, 673, 826, 1286, 1537
LweI	GCATC	7 cut(s)	107, 400, 820, 826, 840, 1546, 1683
MaeIII	GTNAC	5 cut(s)	175, 869, 1105, 1234, 1561
MalI	GATC	8 cut(s)	14, 228, 525, 658, 735, 1115, 1681, 1725
MbiI	CCGCTC	3 cut(s)	288, 908, 980
MboI	GATC	8 cut(s)	12, 226, 523, 656, 733, 1113, 1679, 1723
MfeI	CAATTG	2 cut(s)	740, 843
MflI	RGATCY	2 cut(s)	733, 1679
MhlI	GDGCHC	5 cut(s)	204, 557, 1293, 1332, 1493
MlsI	TGGCCA	1 cut(s)	495
MluCI	AATT	9 cut(s)	740, 818, 843, 863, 1407, 1455, 1554, 1711, 1719
MluNI	TGGCCA	1 cut(s)	495
Mly113I	GGCGCC	1 cut(s)	104
MlyI	GAGTC	2 cut(s)	49, 1102
MmeI	TCCRAC	3 cut(s)	279, 624, 1707
Mox20I	TGGCCA	1 cut(s)	495
Mph1103I	ATGCAT	1 cut(s)	676
MreI	CGCCGGCG	1 cut(s)	106
MroNI	GCCGGC	2 cut(s)	106, 1533
MroXI	GAANNNNTTC	1 cut(s)	999
MscI	TGGCCA	1 cut(s)	495
MseI	TTAA	3 cut(s)	792, 951, 1362
MslI	CAYNNNNRTG	3 cut(s)	396, 1241, 1496
Msp20I	TGGCCA	1 cut(s)	495
MspA1I	CMGCKG	1 cut(s)	62
MspI	CCGG	8 cut(s)	107, 129, 180, 459, 534, 1293, 1534, 1639
MunI	CAATTG	2 cut(s)	740, 843
Mva1269I	GAATGC	3 cut(s)	568, 676, 1502
MvaI	CCWGG	5 cut(s)	146, 209, 521, 696, 895
MvnI	CGCG	1 cut(s)	1481
MwoI	GCNNNNNNNGC	6 cut(s)	250, 839, 1061, 1265, 1274, 1508
NaeI	GCCGGC	2 cut(s)	108, 1535
NarI	GGCGCC	1 cut(s)	104
NciI	CCSGG	7 cut(s)	130, 181, 460, 534, 535, 1293, 1640
NdeI	CATATG	1 cut(s)	783
NdeII	GATC	8 cut(s)	12, 226, 523, 656, 733, 1113, 1679, 1723
NgoMIV	GCCGGC	2 cut(s)	106, 1533
NlaIII	CATG	6 cut(s)	494, 503, 704, 887, 1510, 1609
NlaIV	GGNNCC	8 cut(s)	66, 105, 555, 735, 968, 1603, 1637, 1681
NmuCI	GTSAC	3 cut(s)	175, 1105, 1234
NsiI	ATGCAT	1 cut(s)	676
NspI	RCATGY	2 cut(s)	704, 887
NspV	TTCGAA	2 cut(s)	425, 1181
OliI	CACNNNNGTG	2 cut(s)	1241, 1496
PaqCI	CACCTGC	2 cut(s)	163, 259
PciI	ACATGT	1 cut(s)	883
PciSI	GCTCTTC	1 cut(s)	990
PcsI	WCGNNNNNNNCGW	3 cut(s)	83, 89, 557
PctI	GAATGC	3 cut(s)	568, 676, 1502
PdiI	GCCGGC	2 cut(s)	108, 1535
PdmI	GAANNNNTTC	1 cut(s)	999
PfeI	GAWTC	7 cut(s)	247, 302, 451, 632, 1016, 1212, 1728
PflMI	CCANNNNNTGG	1 cut(s)	1689
PfoI	TCCNGGA	2 cut(s)	128, 519
Ple19I	CGATCG	1 cut(s)	15
PleI	GAGTC	2 cut(s)	49, 1102
PluTI	GGCGCC	1 cut(s)	107
PpsI	GAGTC	2 cut(s)	49, 1102
PscI	ACATGT	1 cut(s)	883
Psp124BI	GAGCTC	1 cut(s)	204
Psp6I	CCWGG	5 cut(s)	144, 207, 519, 694, 893
PspEI	GGTNACC	1 cut(s)	175
PspFI	CCCAGC	1 cut(s)	352
PspGI	CCWGG	5 cut(s)	144, 207, 519, 694, 893
PspN4I	GGNNCC	8 cut(s)	66, 105, 555, 735, 968, 1603, 1637, 1681
PspOMI	GGGCCC	1 cut(s)	553
PspPI	GGNCC	7 cut(s)	64, 142, 456, 553, 554, 967, 1641
PstI	CTGCAG	1 cut(s)	586
PstNI	CAGNNNCTG	2 cut(s)	250, 839
PsuI	RGATCY	2 cut(s)	733, 1679
PvuI	CGATCG	1 cut(s)	15
RsaI	GTAC	1 cut(s)	516
RsaNI	GTAC	1 cut(s)	515
RseI	CAYNNNNRTG	3 cut(s)	396, 1241, 1496
Rsr2I	CGGWCCG	1 cut(s)	456
RsrII	CGGWCCG	1 cut(s)	456
SacI	GAGCTC	1 cut(s)	204
SapI	GCTCTTC	1 cut(s)	990
SaqAI	TTAA	3 cut(s)	792, 951, 1362
Sau3AI	GATC	8 cut(s)	12, 226, 523, 656, 733, 1113, 1679, 1723
Sau96I	GGNCC	7 cut(s)	64, 142, 456, 553, 554, 967, 1641
SchI	GAGTC	2 cut(s)	49, 1102
SduI	GDGCHC	5 cut(s)	204, 557, 1293, 1332, 1493
SfaNI	GCATC	7 cut(s)	107, 400, 820, 826, 840, 1546, 1683
SfcI	CTRYAG	1 cut(s)	582
SfoI	GGCGCC	1 cut(s)	105
SfuI	TTCGAA	2 cut(s)	425, 1181
SgrAI	CRCCGGYG	1 cut(s)	106
SinI	GGWCC	4 cut(s)	64, 142, 456, 967
SmaI	CCCGGG	1 cut(s)	535
SmiMI	CAYNNNNRTG	3 cut(s)	396, 1241, 1496
SmlI	CTYRAG	1 cut(s)	1645
SmoI	CTYRAG	1 cut(s)	1645
Sse9I	AATT	9 cut(s)	740, 818, 843, 863, 1407, 1455, 1554, 1711, 1719
SspDI	GGCGCC	1 cut(s)	103
SspI	AATATT	1 cut(s)	1177
SstI	GAGCTC	1 cut(s)	204
StyI	CCWWGG	1 cut(s)	1082
TaaI	ACNGT	8 cut(s)	283, 621, 1052, 1105, 1240, 1264, 1288, 1567
TaqI	TCGA	7 cut(s)	15, 92, 122, 425, 560, 1181, 1726
TaqII	GACCGA	1 cut(s)	444
TasI	AATT	9 cut(s)	740, 818, 843, 863, 1407, 1455, 1554, 1711, 1719
TauI	GCSGC	6 cut(s)	187, 215, 291, 329, 380, 1636
TfiI	GAWTC	7 cut(s)	247, 302, 451, 632, 1016, 1212, 1728
Tru1I	TTAA	3 cut(s)	792, 951, 1362
Tru9I	TTAA	3 cut(s)	792, 951, 1362
TscAI	CASTG	6 cut(s)	963, 1110, 1245, 1491, 1503, 1596
TseFI	GTSAC	3 cut(s)	175, 1105, 1234
TseI	GCWGC	7 cut(s)	233, 482, 584, 686, 839, 1274, 1550
Tsp45I	GTSAC	3 cut(s)	175, 1105, 1234
TspDTI	ATGAA	5 cut(s)	630, 1104, 1118, 1345, 1495
TspMI	CCCGGG	1 cut(s)	533
TspRI	CASTG	6 cut(s)	963, 1110, 1245, 1491, 1503, 1596
Van91I	CCANNNNNTGG	1 cut(s)	1689
VneI	GTGCAC	2 cut(s)	1328, 1489
VpaK11BI	GGWCC	4 cut(s)	64, 142, 456, 967
XapI	RAATTY	1 cut(s)	863
XceI	RCATGY	2 cut(s)	704, 887
XmaI	CCCGGG	1 cut(s)	533
XmnI	GAANNNNTTC	1 cut(s)	999
Zsp2I	ATGCAT	1 cut(s)	676

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.