Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0010764

Physical Location & Seq

Genomic Coordinates Forward (+)

12262149 .. 12265825

Gene Structure 3677 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00291910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGTCTTCCCCGATCGAACAAGGTGAGAGAGATATAGAGAAGGGTTTGATGACGACTCCAGCGGACCCATCGCCGTCGCCGTCGCCGACTCCTTCGCCGTCATCGACGGCAACGGCGCCGGCGCTGGTACTGTCGAACTCGGGGAAGAGGATGGACCAGGCGGGGAAGAAGAAGTATGTGAAGCAGGTGACCGGGCGGCACAACGACACCGAGCTCCACCTGGCGGCGCAGAAGGGCGATCTGGCCGCCGTGAAGCAGATTCTGCGTGATATTGTTTCGCAGGTGGAGGGGACGGTGAGCGGGGCTGAGTTGGATTCGGAGGTGGCGGAGGTGAGGGCGGCGGTGGTGAATGATGTGAATGAGCTGGGGGAGACGGCGTTGTTCACGGCGGCGGATAGAGGGCATCTGGATGTGGTCAAGGAGTTGTTGCAGTATTCGAATAAGGAGAGTGTTGTGAAGAAGAATCGGTCCGGGTTTAGTCCTTTGCATATTGCTGCAACTCAAGGCCATCATGCCATTGTTCAGGTACTCCTGGATCATGACCCGGCGCTAAGCAGGACAACTGGCCCATCGAATGCAACCCCACTTATATCTGCAGCTCAAAGAGGGCATATAGCTGTGGTTGATGAACTGTTGTCAAAGGATTCTACCTTGTTGGAGATTTCAAGATCAAATGGGAAGAATGCATTGCATCTGGCTGCAAGACCAGGGCATGTGGAGATTGTAAGAGCATTGCTAAATAGGGATCCACAATTGGCACGAAGGACTGACAAGAAAGGGCAAACTGCCTTGCATATGGCTGTTAAAGGGACAAGCTGTGAGGTGGTGAAATTGCTACTGGATGCAGATGCTGCAATTGTGATGCTTCCTGACAAATTCGGTAACACAGCATTACATGTAGCCACCAGGAAGAAGCGAGCTGAGATAGTGAACGAGTTGTTATCCCTCCCAGACAGCAATGTTAATGCACTGAATAGGGACCACAAAACCGCTCTTGACATTGCTGAAGAGCTTCCACTTTCGGAAGAATCAGCAGAAGTAAGGGCTTGCCTTTACAAATACGGTGCTGTTAGAGCTAATGAACTGAATCAACCAAGGGATGAACTAAGAAAAACAGTGACTCAGATCAAGAATGATGTTCATATCCAGCTTGAACAAACAAAGAAAACCAATAAAAATGTTCAGAATATTTCAAAAGACCTCAGGAAGCTCCATAGAGAAGGAATCAACAATGCCACCAACTCAGTCACTGTGGTGGCTGTTCTATTTGCAACAGTTGCTTTTGCAGCTATATTTACTGTGCCCGGCGGTGATAAAGATGATGGGACAGCTGTGGTAGTGCACTCTTCTCCATTCAAAATCTTCTTCATTTTTAATGCCATTGCTCTTTTTACTTCTCTGGCTGTTGTGGTGGTTCAAATTACATTGGTCAGAGGCGAGACAAAAAAAGCAGAGAAAAAGGTCGTAGAAATTATCAACAAGTTGATGTGGCTCGCGTCAGTGTGCACTTCAGTGGCATTCATGGCCTCCTCTTATATTGTGGTTGGCCGGCATCATAAGTGGGCTGCAATTCTGGTAACAGTTGTTGGGGGAATGATAATGGCAGTGGTTCTTGGCACCATGACATATTATGTGGTGAAGTCAAAGCGGCACCGGGCCTTGAGAAAGAAGGATAAGAGTTTAAGGAGAAGTGGAACTGGATCCACCTCGTGGATGCCTTCAGACAATTCGGAAATTGATCGAATCTATGCCCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008104 GO:0008150 GO:0009628 GO:0009651 GO:0009987 GO:0016020 GO:0023052 GO:0033036 GO:0034613 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051641 GO:0051716 GO:0065007 GO:0070727 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 PGG

Protein Analysis

585

Amino Acids

63.5

Weight (kDa)

9.38

Isoelectric Point (pI)

42.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	72 - 181	6.9e-16	Ankyrin repeats (3 copies)
Ank_KRIT1	PF24521	123 - 215	2.1e-07	KRIT1 ankyrin-repeats domain
Ank_4	PF13637	127 - 178	5.8e-08	Ankyrin repeats (many copies)
Ank_2	PF12796	191 - 249	1.8e-10	Ankyrin repeats (3 copies)
Ank_2	PF12796	196 - 284	1.3e-16	Ankyrin repeats (3 copies)
Ank_4	PF13637	230 - 280	1.1e-09	Ankyrin repeats (many copies)
Ank_2	PF12796	255 - 322	1.9e-11	Ankyrin repeats (3 copies)
Ank_5	PF13857	279 - 335	4.8e-07	Ankyrin repeats (many copies)
PGG	PF13962	407 - 514	9.5e-29	Domain of unknown function
H_PPase	PF03030	429 - 551	7.2e-06	Inorganic H+ pyrophosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12360 AT3G12360
fragaria_vesca	FvH4_7g20900
malus_domestica	MD01G1118500.v1.1 MD07G1186700.v1.1
prunus_persica	Prupe.2G225600_v2.0.a1
pyrus_communis	pycom01g14570
rosa_chinensis	RchiOBHm_Chr1g0365211
rosa_laevigata	RLG00000027438
rosa_multiflora	Rmu_co8385283.1_g000001 Rmu_sc0008035.1_g000005 Rmu_sc0024070.1_g000002
rosa_roxburghii	Rroxscaffold_4G00291370 Rroxscaffold_4G00291910
rosa_rugosa	Rorug01G0320300
rosa_samantha	Rh1AG329300 Rh1BG290700 Rh1CG307600 Rh1DG322400
rosa_wichuraiana	Rw1G029200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	175, 271
Acc36I	ACCTGC	2 cut(s)	175, 271
AccB1I	GGYRCC	3 cut(s)	115, 1616, 1650
AccB7I	CCANNNNNTGG	1 cut(s)	1710
AccBSI	CCGCTC	2 cut(s)	300, 992
AccII	CGCG	1 cut(s)	1496
AclWI	GGATC	5 cut(s)	543, 740, 753, 1695, 1708
AcoI	YGGCCR	2 cut(s)	243, 1546
AcsI	RAATTY	1 cut(s)	875
AcuI	CTGAAG	3 cut(s)	1026, 1494, 1704
AcyI	GRCGYC	1 cut(s)	116
AdeI	CACNNNGTG	1 cut(s)	1710
AfaI	GTAC	2 cut(s)	129, 528
AfiI	CCNNNNNNNGG	2 cut(s)	223, 1710
AflIII	ACRYGT	1 cut(s)	895
AgsI	TTSAA	5 cut(s)	666, 1154, 1194, 1357, 1418
AjnI	CCWGG	5 cut(s)	156, 219, 531, 706, 905
AleI	CACNNNNGTG	2 cut(s)	1253, 1511
Alw21I	GWGCWC	3 cut(s)	216, 1344, 1508
Alw26I	GTCTC	2 cut(s)	365, 1433
Alw44I	GTGCAC	2 cut(s)	1340, 1504
AlwI	GGATC	5 cut(s)	543, 740, 753, 1695, 1708
AlwNI	CAGNNNCTG	3 cut(s)	262, 851, 1250
Ama87I	CYCGRG	1 cut(s)	139
AoxI	GGCC	6 cut(s)	243, 505, 565, 1524, 1546, 1656
ApaLI	GTGCAC	2 cut(s)	1340, 1504
ApeKI	GCWGC	6 cut(s)	494, 596, 698, 851, 1286, 1565
ApoI	RAATTY	1 cut(s)	875
Asp700I	GAANNNNTTC	1 cut(s)	1011
AspLEI	GCGC	4 cut(s)	118, 124, 229, 550
AspS9I	GGNCC	6 cut(s)	64, 154, 468, 566, 979, 1656
AsuC2I	CCSGG	5 cut(s)	193, 472, 545, 1305, 1655
AsuHPI	GGTGA	8 cut(s)	35, 199, 307, 343, 358, 838, 1322, 1648
AsuII	TTCGAA	1 cut(s)	437
AvaI	CYCGRG	1 cut(s)	139
AvaII	GGWCC	4 cut(s)	64, 154, 468, 979
AxyI	CCTNAGG	1 cut(s)	1202
BaeGI	GKGCMC	3 cut(s)	1305, 1344, 1508
BamHI	GGATCC	2 cut(s)	745, 1700
BanI	GGYRCC	3 cut(s)	115, 1616, 1650
BanII	GRGCYC	1 cut(s)	216
BauI	CACGAG	1 cut(s)	1708
Bbv12I	GWGCWC	3 cut(s)	216, 1344, 1508
BbvI	GCAGC	6 cut(s)	481, 608, 685, 838, 1298, 1552
BccI	CCATC	5 cut(s)	76, 145, 516, 577, 1316
BceAI	ACGGC	8 cut(s)	58, 64, 82, 123, 129, 233, 390, 402
BciT130I	CCWGG	5 cut(s)	158, 221, 533, 708, 907
BcnI	CCSGG	5 cut(s)	193, 472, 545, 1305, 1655
BcoDI	GTCTC	2 cut(s)	365, 1433
BfmI	CTRYAG	1 cut(s)	594
BfoI	RGCGCY	3 cut(s)	119, 125, 551
BfuAI	ACCTGC	2 cut(s)	175, 271
BlpI	GCTNAGC	1 cut(s)	551
Bme18I	GGWCC	4 cut(s)	64, 154, 468, 979
BmeT110I	CYCGRG	1 cut(s)	139
BmgT120I	GGNCC	6 cut(s)	64, 154, 468, 566, 979, 1656
BmiI	GGNNCC	7 cut(s)	66, 117, 747, 980, 1618, 1652, 1702
BmsI	GCATC	7 cut(s)	412, 700, 832, 838, 852, 1561, 1704
BpmI	CTGGAG	1 cut(s)	42
Bpu1102I	GCTNAGC	1 cut(s)	551
Bpu14I	TTCGAA	1 cut(s)	437
BpuEI	CTTGAG	2 cut(s)	486, 1681
BpuMI	CCSGG	5 cut(s)	193, 472, 545, 1305, 1655
BsaHI	GRCGYC	1 cut(s)	116
BsaJI	CCNNGG	2 cut(s)	707, 1094
BsaXI	ACNNNNNCTCC	2 cut(s)	362, 392
Bsc4I	CCNNNNNNNGG	2 cut(s)	223, 1710
Bse118I	RCCGGY	2 cut(s)	118, 1548
Bse1I	ACTGG	3 cut(s)	568, 843, 1702
Bse21I	CCTNAGG	1 cut(s)	1202
Bse3DI	GCAATG	5 cut(s)	686, 731, 964, 999, 1380
BseBI	CCWGG	5 cut(s)	158, 221, 533, 708, 907
BseDI	CCNNGG	2 cut(s)	707, 1094
BseGI	GGATG	5 cut(s)	156, 415, 847, 1105, 1719
BseLI	CCNNNNNNNGG	2 cut(s)	223, 1710
BseMI	GCAATG	5 cut(s)	686, 731, 964, 999, 1380
BseMII	CTCAG	5 cut(s)	297, 912, 1136, 1216, 1257
BseNI	ACTGG	3 cut(s)	568, 843, 1702
BseRI	GAGGAG	1 cut(s)	1519
BseSI	GKGCMC	3 cut(s)	1305, 1344, 1508
BseXI	GCAGC	6 cut(s)	481, 608, 685, 838, 1298, 1552
BseYI	CCCAGC	1 cut(s)	364
Bsh1236I	CGCG	1 cut(s)	1496
Bsh1285I	CGRYCG	1 cut(s)	15
BshFI	GGCC	6 cut(s)	245, 507, 567, 1526, 1548, 1658
BshNI	GGYRCC	3 cut(s)	115, 1616, 1650
BsiEI	CGRYCG	1 cut(s)	15
BsiHKAI	GWGCWC	3 cut(s)	216, 1344, 1508
BsiHKCI	CYCGRG	1 cut(s)	139
BsiSI	CCGG	7 cut(s)	119, 192, 471, 545, 1305, 1549, 1654
BslFI	GGGAC	4 cut(s)	304, 823, 992, 1339
BslI	CCNNNNNNNGG	2 cut(s)	223, 1710
BsmAI	GTCTC	2 cut(s)	365, 1433
BsmBI	CGTCTC	1 cut(s)	365
BsmFI	GGGAC	4 cut(s)	304, 823, 992, 1339
BsmI	GAATGC	3 cut(s)	580, 688, 1517
BsnI	GGCC	6 cut(s)	245, 507, 567, 1526, 1548, 1658
BsoBI	CYCGRG	1 cut(s)	139
Bsp119I	TTCGAA	1 cut(s)	437
Bsp1286I	GDGCHC	4 cut(s)	216, 1305, 1344, 1508
Bsp143I	GATC	8 cut(s)	12, 238, 535, 668, 745, 1125, 1700, 1738
Bsp1720I	GCTNAGC	1 cut(s)	551
BspANI	GGCC	6 cut(s)	245, 507, 567, 1526, 1548, 1658
BspCNI	CTCAG	5 cut(s)	298, 913, 1135, 1215, 1256
BspFNI	CGCG	1 cut(s)	1496
BspHI	TCATGA	1 cut(s)	538
BspLI	GGNNCC	7 cut(s)	66, 117, 747, 980, 1618, 1652, 1702
BspMAI	CTGCAG	1 cut(s)	598
BspMI	ACCTGC	2 cut(s)	175, 271
BspPI	GGATC	5 cut(s)	543, 740, 753, 1695, 1708
BspQI	GCTCTTC	1 cut(s)	1002
BspT104I	TTCGAA	1 cut(s)	437
BspT107I	GGYRCC	3 cut(s)	115, 1616, 1650
BsrBI	CCGCTC	2 cut(s)	300, 992
BsrDI	GCAATG	5 cut(s)	686, 731, 964, 999, 1380
BsrFI	RCCGGY	2 cut(s)	118, 1548
BsrI	ACTGG	3 cut(s)	568, 843, 1702
BssAI	RCCGGY	2 cut(s)	118, 1548
BssECI	CCNNGG	2 cut(s)	707, 1094
BssMI	GATC	8 cut(s)	12, 238, 535, 668, 745, 1125, 1700, 1738
BssNI	GRCGYC	1 cut(s)	116
BssSI	CACGAG	1 cut(s)	1708
BssT1I	CCWWGG	1 cut(s)	1094
Bst2BI	CACGAG	1 cut(s)	1708
Bst2UI	CCWGG	5 cut(s)	158, 221, 533, 708, 907
Bst4CI	ACNGT	9 cut(s)	132, 295, 633, 1064, 1117, 1252, 1276, 1300, 1582
Bst6I	CTCTTC	3 cut(s)	140, 1002, 1351
BstACI	GRCGYC	1 cut(s)	116
BstAPI	GCANNNNNTGC	3 cut(s)	262, 851, 1277
BstBI	TTCGAA	1 cut(s)	437
BstC8I	GCNNGC	5 cut(s)	120, 918, 1048, 1494, 1550
BstDEI	CTNAG	7 cut(s)	306, 551, 921, 1106, 1122, 1202, 1243
BstEII	GGTNACC	1 cut(s)	187
BstF5I	GGATG	5 cut(s)	156, 415, 847, 1105, 1719
BstFNI	CGCG	1 cut(s)	1496
BstH2I	RGCGCY	3 cut(s)	119, 125, 551
BstHHI	GCGC	4 cut(s)	118, 124, 229, 550
BstKTI	GATC	8 cut(s)	15, 241, 538, 671, 748, 1128, 1703, 1741
BstMAI	GTCTC	2 cut(s)	365, 1433
BstMBI	GATC	8 cut(s)	12, 238, 535, 668, 745, 1125, 1700, 1738
BstMCI	CGRYCG	1 cut(s)	15
BstMWI	GCNNNNNNNGC	6 cut(s)	262, 851, 1073, 1277, 1286, 1523
BstNI	CCWGG	5 cut(s)	158, 221, 533, 708, 907
BstNSI	RCATGY	2 cut(s)	716, 899
BstPI	GGTNACC	1 cut(s)	187
BstSFI	CTRYAG	1 cut(s)	594
BstSLI	GKGCMC	3 cut(s)	1305, 1344, 1508
BstUI	CGCG	1 cut(s)	1496
BstV1I	GCAGC	6 cut(s)	481, 608, 685, 838, 1298, 1552
BstX2I	RGATCY	2 cut(s)	745, 1700
BstYI	RGATCY	2 cut(s)	745, 1700
Bsu36I	CCTNAGG	1 cut(s)	1202
BsuRI	GGCC	6 cut(s)	245, 507, 567, 1526, 1548, 1658
BtgZI	GCGATG	1 cut(s)	54
BtsCI	GGATG	5 cut(s)	156, 415, 847, 1105, 1719
BtsI	GCAGTG	1 cut(s)	1611
BtsIMutI	CAGTG	6 cut(s)	968, 1122, 1248, 1506, 1518, 1611
BveI	ACCTGC	2 cut(s)	175, 271
Cac8I	GCNNGC	5 cut(s)	120, 918, 1048, 1494, 1550
CaiI	CAGNNNCTG	3 cut(s)	262, 851, 1250
CciI	TCATGA	1 cut(s)	538
CfoI	GCGC	4 cut(s)	118, 124, 229, 550
Cfr10I	RCCGGY	2 cut(s)	118, 1548
Cfr13I	GGNCC	6 cut(s)	64, 154, 468, 566, 979, 1656
CpoI	CGGWCCG	1 cut(s)	468
CseI	GACGC	1 cut(s)	1485
Csp6I	GTAC	2 cut(s)	128, 527
CspI	CGGWCCG	1 cut(s)	468
CviAII	CATG	6 cut(s)	512, 539, 713, 896, 1522, 1621
CviQI	GTAC	2 cut(s)	128, 527
DdeI	CTNAG	7 cut(s)	306, 551, 921, 1106, 1122, 1202, 1243
DinI	GGCGCC	1 cut(s)	117
DpnI	GATC	8 cut(s)	14, 240, 537, 670, 747, 1127, 1702, 1740
DpnII	GATC	8 cut(s)	12, 238, 535, 668, 745, 1125, 1700, 1738
DraIII	CACNNNGTG	1 cut(s)	1710
EaeI	YGGCCR	2 cut(s)	243, 1546
Eam1104I	CTCTTC	3 cut(s)	140, 1002, 1351
EarI	CTCTTC	3 cut(s)	140, 1002, 1351
EciI	GGCGGA	2 cut(s)	341, 407
Ecl136II	GAGCTC	1 cut(s)	214
Eco130I	CCWWGG	1 cut(s)	1094
Eco24I	GRGCYC	1 cut(s)	216
Eco47I	GGWCC	4 cut(s)	64, 154, 468, 979
Eco53kI	GAGCTC	1 cut(s)	214
Eco57I	CTGAAG	3 cut(s)	1026, 1494, 1704
Eco81I	CCTNAGG	1 cut(s)	1202
Eco88I	CYCGRG	1 cut(s)	139
Eco91I	GGTNACC	1 cut(s)	187
EcoICRI	GAGCTC	1 cut(s)	214
EcoO65I	GGTNACC	1 cut(s)	187
EcoRII	CCWGG	5 cut(s)	156, 219, 531, 706, 905
EcoT14I	CCWWGG	1 cut(s)	1094
EcoT22I	ATGCAT	1 cut(s)	688
EcoT38I	GRGCYC	1 cut(s)	216
EgeI	GGCGCC	1 cut(s)	117
EheI	GGCGCC	1 cut(s)	117
ErhI	CCWWGG	1 cut(s)	1094
Esp3I	CGTCTC	1 cut(s)	365
FaeI	CATG	6 cut(s)	515, 542, 716, 899, 1525, 1624
FaqI	GGGAC	4 cut(s)	304, 823, 992, 1339
FatI	CATG	6 cut(s)	511, 538, 712, 895, 1521, 1620
FauI	CCCGC	2 cut(s)	154, 293
FauNDI	CATATG	1 cut(s)	795
FokI	GGATG	5 cut(s)	163, 422, 854, 1112, 1726
FriOI	GRGCYC	1 cut(s)	216
GlaI	GCGC	4 cut(s)	117, 123, 228, 549
GsaI	CCCAGC	1 cut(s)	368
GsuI	CTGGAG	1 cut(s)	42
HaeII	RGCGCY	3 cut(s)	119, 125, 551
HaeIII	GGCC	6 cut(s)	245, 507, 567, 1526, 1548, 1658
HapII	CCGG	7 cut(s)	119, 192, 471, 545, 1305, 1549, 1654
HgaI	GACGC	1 cut(s)	1485
HhaI	GCGC	4 cut(s)	118, 124, 229, 550
Hin1I	GRCGYC	1 cut(s)	116
Hin1II	CATG	6 cut(s)	515, 542, 716, 899, 1525, 1624
Hin6I	GCGC	4 cut(s)	116, 122, 227, 548
HinP1I	GCGC	4 cut(s)	116, 122, 227, 548
HpaII	CCGG	7 cut(s)	119, 192, 471, 545, 1305, 1549, 1654
HphI	GGTGA	8 cut(s)	35, 199, 307, 343, 358, 838, 1322, 1648
Hpy166II	GTNNAC	4 cut(s)	384, 931, 1342, 1506
Hpy188I	TCNGA	7 cut(s)	319, 1024, 1125, 1185, 1433, 1723, 1732
Hpy188III	TCNNGA	7 cut(s)	407, 539, 666, 869, 995, 1129, 1204
Hpy8I	GTNNAC	4 cut(s)	384, 931, 1342, 1506
Hpy99I	CGWCG	3 cut(s)	79, 85, 109
HpyAV	CCTTC	7 cut(s)	34, 102, 226, 756, 1214, 1663, 1728
HpyCH4III	ACNGT	9 cut(s)	132, 295, 633, 1064, 1117, 1252, 1276, 1300, 1582
HpyF10VI	GCNNNNNNNGC	6 cut(s)	262, 851, 1073, 1277, 1286, 1523
HpyF3I	CTNAG	7 cut(s)	306, 551, 921, 1106, 1122, 1202, 1243
Hsp92I	GRCGYC	1 cut(s)	116
Hsp92II	CATG	6 cut(s)	515, 542, 716, 899, 1525, 1624
HspAI	GCGC	4 cut(s)	116, 122, 227, 548
KasI	GGCGCC	1 cut(s)	115
KroI	GCCGGC	2 cut(s)	118, 1548
KroNI	GCCGGC	2 cut(s)	120, 1550
Kzo9I	GATC	8 cut(s)	12, 238, 535, 668, 745, 1125, 1700, 1738
LguI	GCTCTTC	1 cut(s)	1002
LmnI	GCTCC	2 cut(s)	219, 1215
Lsp1109I	GCAGC	6 cut(s)	481, 608, 685, 838, 1298, 1552
LweI	GCATC	7 cut(s)	412, 700, 832, 838, 852, 1561, 1704
MaeIII	GTNAC	5 cut(s)	187, 881, 1117, 1246, 1576
MalI	GATC	8 cut(s)	14, 240, 537, 670, 747, 1127, 1702, 1740
MbiI	CCGCTC	2 cut(s)	300, 992
MboI	GATC	8 cut(s)	12, 238, 535, 668, 745, 1125, 1700, 1738
MfeI	CAATTG	2 cut(s)	752, 855
MflI	RGATCY	2 cut(s)	745, 1700
MhlI	GDGCHC	4 cut(s)	216, 1305, 1344, 1508
MluCI	AATT	9 cut(s)	752, 830, 855, 875, 1419, 1470, 1569, 1726, 1734
Mly113I	GGCGCC	1 cut(s)	116
MlyI	GAGTC	3 cut(s)	49, 82, 1114
MmeI	TCCRAC	2 cut(s)	291, 636
Mph1103I	ATGCAT	1 cut(s)	688
MreI	CGCCGGCG	1 cut(s)	118
MroNI	GCCGGC	2 cut(s)	118, 1548
MroXI	GAANNNNTTC	1 cut(s)	1011
MseI	TTAA	4 cut(s)	804, 963, 1374, 1682
MslI	CAYNNNNRTG	3 cut(s)	408, 1253, 1511
MspA1I	CMGCKG	2 cut(s)	62, 1331
MspI	CCGG	7 cut(s)	119, 192, 471, 545, 1305, 1549, 1654
MunI	CAATTG	2 cut(s)	752, 855
Mva1269I	GAATGC	3 cut(s)	580, 688, 1517
MvaI	CCWGG	5 cut(s)	158, 221, 533, 708, 907
MvnI	CGCG	1 cut(s)	1496
MwoI	GCNNNNNNNGC	6 cut(s)	262, 851, 1073, 1277, 1286, 1523
NaeI	GCCGGC	2 cut(s)	120, 1550
NarI	GGCGCC	1 cut(s)	116
NciI	CCSGG	5 cut(s)	193, 472, 545, 1305, 1655
NdeI	CATATG	1 cut(s)	795
NdeII	GATC	8 cut(s)	12, 238, 535, 668, 745, 1125, 1700, 1738
NgoMIV	GCCGGC	2 cut(s)	118, 1548
NlaIII	CATG	6 cut(s)	515, 542, 716, 899, 1525, 1624
NlaIV	GGNNCC	7 cut(s)	66, 117, 747, 980, 1618, 1652, 1702
NmuCI	GTSAC	3 cut(s)	187, 1117, 1246
NsiI	ATGCAT	1 cut(s)	688
NspI	RCATGY	2 cut(s)	716, 899
NspV	TTCGAA	1 cut(s)	437
OliI	CACNNNNGTG	2 cut(s)	1253, 1511
PagI	TCATGA	1 cut(s)	538
PaqCI	CACCTGC	2 cut(s)	175, 271
PciI	ACATGT	1 cut(s)	895
PciSI	GCTCTTC	1 cut(s)	1002
PcsI	WCGNNNNNNNCGW	3 cut(s)	77, 83, 101
PctI	GAATGC	3 cut(s)	580, 688, 1517
PdiI	GCCGGC	2 cut(s)	120, 1550
PdmI	GAANNNNTTC	1 cut(s)	1011
PfeI	GAWTC	8 cut(s)	259, 314, 463, 644, 1028, 1087, 1224, 1743
PflMI	CCANNNNNTGG	1 cut(s)	1710
PfoI	TCCNGGA	1 cut(s)	531
Ple19I	CGATCG	1 cut(s)	15
PleI	GAGTC	3 cut(s)	49, 82, 1114
PluTI	GGCGCC	1 cut(s)	119
PpsI	GAGTC	3 cut(s)	49, 82, 1114
PscI	ACATGT	1 cut(s)	895
Psp124BI	GAGCTC	1 cut(s)	216
Psp6I	CCWGG	5 cut(s)	156, 219, 531, 706, 905
PspEI	GGTNACC	1 cut(s)	187
PspFI	CCCAGC	1 cut(s)	364
PspGI	CCWGG	5 cut(s)	156, 219, 531, 706, 905
PspN4I	GGNNCC	7 cut(s)	66, 117, 747, 980, 1618, 1652, 1702
PspPI	GGNCC	6 cut(s)	64, 154, 468, 566, 979, 1656
PstI	CTGCAG	1 cut(s)	598
PstNI	CAGNNNCTG	3 cut(s)	262, 851, 1250
PsuI	RGATCY	2 cut(s)	745, 1700
PvuI	CGATCG	1 cut(s)	15
PvuII	CAGCTG	1 cut(s)	1331
RsaI	GTAC	2 cut(s)	129, 528
RsaNI	GTAC	2 cut(s)	128, 527
RseI	CAYNNNNRTG	3 cut(s)	408, 1253, 1511
Rsr2I	CGGWCCG	1 cut(s)	468
RsrII	CGGWCCG	1 cut(s)	468
SacI	GAGCTC	1 cut(s)	216
SapI	GCTCTTC	1 cut(s)	1002
SaqAI	TTAA	4 cut(s)	804, 963, 1374, 1682
Sau3AI	GATC	8 cut(s)	12, 238, 535, 668, 745, 1125, 1700, 1738
Sau96I	GGNCC	6 cut(s)	64, 154, 468, 566, 979, 1656
SchI	GAGTC	3 cut(s)	49, 82, 1114
SduI	GDGCHC	4 cut(s)	216, 1305, 1344, 1508
SfaNI	GCATC	7 cut(s)	412, 700, 832, 838, 852, 1561, 1704
SfcI	CTRYAG	1 cut(s)	594
SfoI	GGCGCC	1 cut(s)	117
SfuI	TTCGAA	1 cut(s)	437
SgrAI	CRCCGGYG	1 cut(s)	118
SinI	GGWCC	4 cut(s)	64, 154, 468, 979
SmiMI	CAYNNNNRTG	3 cut(s)	408, 1253, 1511
SmlI	CTYRAG	2 cut(s)	501, 1660
SmoI	CTYRAG	2 cut(s)	501, 1660
Sse9I	AATT	9 cut(s)	752, 830, 855, 875, 1419, 1470, 1569, 1726, 1734
SspDI	GGCGCC	1 cut(s)	115
SspI	AATATT	1 cut(s)	1189
SstI	GAGCTC	1 cut(s)	216
StyI	CCWWGG	1 cut(s)	1094
TaaI	ACNGT	9 cut(s)	132, 295, 633, 1064, 1117, 1252, 1276, 1300, 1582
TaqI	TCGA	6 cut(s)	15, 104, 134, 437, 572, 1741
TaqII	GACCGA	1 cut(s)	456
TasI	AATT	9 cut(s)	752, 830, 855, 875, 1419, 1470, 1569, 1726, 1734
TauI	GCSGC	6 cut(s)	199, 227, 248, 341, 392, 1651
TfiI	GAWTC	8 cut(s)	259, 314, 463, 644, 1028, 1087, 1224, 1743
Tru1I	TTAA	4 cut(s)	804, 963, 1374, 1682
Tru9I	TTAA	4 cut(s)	804, 963, 1374, 1682
TscAI	CASTG	6 cut(s)	975, 1122, 1255, 1506, 1518, 1611
TseFI	GTSAC	3 cut(s)	187, 1117, 1246
TseI	GCWGC	6 cut(s)	494, 596, 698, 851, 1286, 1565
Tsp45I	GTSAC	3 cut(s)	187, 1117, 1246
TspDTI	ATGAA	6 cut(s)	642, 1095, 1116, 1130, 1357, 1510
TspRI	CASTG	6 cut(s)	975, 1122, 1255, 1506, 1518, 1611
Van91I	CCANNNNNTGG	1 cut(s)	1710
VneI	GTGCAC	2 cut(s)	1340, 1504
VpaK11BI	GGWCC	4 cut(s)	64, 154, 468, 979
XapI	RAATTY	1 cut(s)	875
XceI	RCATGY	2 cut(s)	716, 899
XmnI	GAANNNNTTC	1 cut(s)	1011
Zsp2I	ATGCAT	1 cut(s)	688

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.