Ubiquitin-like modifier-activating enzyme
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0132441 |
| rosa_laevigata | RLG00000021058 |
| rosa_roxburghii | Rroxscaffold_1G00020600 Rroxscaffold_2G00113150 Rroxscaffold_3G00238980 Rroxscaffold_4G00293780 Rroxscaffold_6G00420930 Rroxscaffold_7G00201450 |
| rosa_samantha | Rh1BG080500 Rh2BG245100 Rh2CG290600 Rh5AG029400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AfaI | GTAC | 1 cut(s) | 146 |
| AgsI | TTSAA | 1 cut(s) | 52 |
| AhlI | ACTAGT | 1 cut(s) | 43 |
| AluBI | AGCT | 1 cut(s) | 31 |
| AluI | AGCT | 1 cut(s) | 31 |
| AoxI | GGCC | 2 cut(s) | 3, 256 |
| AspS9I | GGNCC | 1 cut(s) | 256 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BccI | CCATC | 1 cut(s) | 14 |
| BcuI | ACTAGT | 1 cut(s) | 43 |
| BfaI | CTAG | 3 cut(s) | 44, 134, 165 |
| BmgT120I | GGNCC | 1 cut(s) | 256 |
| BmiI | GGNNCC | 2 cut(s) | 178, 223 |
| BsaJI | CCNNGG | 2 cut(s) | 217, 226 |
| Bse1I | ACTGG | 1 cut(s) | 180 |
| BseDI | CCNNGG | 2 cut(s) | 217, 226 |
| BseGI | GGATG | 1 cut(s) | 6 |
| BseNI | ACTGG | 1 cut(s) | 180 |
| BseRI | GAGGAG | 1 cut(s) | 253 |
| BshFI | GGCC | 2 cut(s) | 5, 258 |
| BsnI | GGCC | 2 cut(s) | 5, 258 |
| BspANI | GGCC | 2 cut(s) | 5, 258 |
| BspLI | GGNNCC | 2 cut(s) | 178, 223 |
| BsrI | ACTGG | 1 cut(s) | 180 |
| BssECI | CCNNGG | 2 cut(s) | 217, 226 |
| BssT1I | CCWWGG | 1 cut(s) | 226 |
| Bst4CI | ACNGT | 2 cut(s) | 234, 272 |
| BstC8I | GCNNGC | 1 cut(s) | 140 |
| BstDSI | CCRYGG | 1 cut(s) | 217 |
| BstF5I | GGATG | 1 cut(s) | 6 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 95 |
| BsuRI | GGCC | 2 cut(s) | 5, 258 |
| BtgI | CCRYGG | 1 cut(s) | 217 |
| BtsCI | GGATG | 1 cut(s) | 6 |
| BtsIMutI | CAGTG | 1 cut(s) | 187 |
| Cac8I | GCNNGC | 1 cut(s) | 140 |
| Cfr13I | GGNCC | 1 cut(s) | 256 |
| Csp6I | GTAC | 1 cut(s) | 145 |
| CviAII | CATG | 3 cut(s) | 82, 148, 279 |
| CviJI | RGCY | 5 cut(s) | 5, 31, 74, 89, 258 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 31, 74, 89, 258 |
| CviQI | GTAC | 1 cut(s) | 145 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 1 cut(s) | 226 |
| EcoT14I | CCWWGG | 1 cut(s) | 226 |
| ErhI | CCWWGG | 1 cut(s) | 226 |
| FaeI | CATG | 3 cut(s) | 85, 151, 282 |
| FaiI | YATR | 8 cut(s) | 83, 100, 102, 104, 106, 123, 149, 280 |
| FatI | CATG | 3 cut(s) | 81, 147, 278 |
| FspBI | CTAG | 3 cut(s) | 44, 134, 165 |
| HaeIII | GGCC | 2 cut(s) | 5, 258 |
| Hin1II | CATG | 3 cut(s) | 85, 151, 282 |
| Hpy188I | TCNGA | 2 cut(s) | 22, 117 |
| HpyCH4III | ACNGT | 2 cut(s) | 234, 272 |
| HpyCH4V | TGCA | 2 cut(s) | 158, 278 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 95 |
| Hsp92II | CATG | 3 cut(s) | 85, 151, 282 |
| LpnPI | CCDG | 1 cut(s) | 193 |
| MaeI | CTAG | 3 cut(s) | 44, 134, 165 |
| MboII | GAAGA | 2 cut(s) | 35, 69 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MmeI | TCCRAC | 1 cut(s) | 34 |
| MnlI | CCTC | 2 cut(s) | 201, 274 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 95 |
| NlaIII | CATG | 3 cut(s) | 85, 151, 282 |
| NlaIV | GGNNCC | 2 cut(s) | 178, 223 |
| PspN4I | GGNNCC | 2 cut(s) | 178, 223 |
| PspPI | GGNCC | 1 cut(s) | 256 |
| RsaI | GTAC | 1 cut(s) | 146 |
| RsaNI | GTAC | 1 cut(s) | 145 |
| Sau96I | GGNCC | 1 cut(s) | 256 |
| SetI | ASST | 2 cut(s) | 33, 193 |
| SpeI | ACTAGT | 1 cut(s) | 43 |
| SspMI | CTAG | 3 cut(s) | 44, 134, 165 |
| StyI | CCWWGG | 1 cut(s) | 226 |
| TaaI | ACNGT | 2 cut(s) | 234, 272 |
| TatI | WGTACW | 1 cut(s) | 144 |
| TscAI | CASTG | 1 cut(s) | 187 |
| TspDTI | ATGAA | 1 cut(s) | 51 |
| TspGWI | ACGGA | 1 cut(s) | 206 |
| TspRI | CASTG | 1 cut(s) | 187 |
| XspI | CTAG | 3 cut(s) | 44, 134, 165 |