Ubiquitin-like modifier-activating enzyme
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0132441 |
| rosa_laevigata | RLG00000021058 |
| rosa_roxburghii | Rroxscaffold_1G00020600 Rroxscaffold_2G00113150 Rroxscaffold_3G00238980 Rroxscaffold_4G00293780 Rroxscaffold_6G00420930 Rroxscaffold_7G00201450 |
| rosa_samantha | Rh1BG080500 Rh2BG245100 Rh2CG290600 Rh5AG029400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AfaI | GTAC | 1 cut(s) | 134 |
| AhlI | ACTAGT | 1 cut(s) | 43 |
| AluBI | AGCT | 1 cut(s) | 31 |
| AluI | AGCT | 1 cut(s) | 31 |
| AoxI | GGCC | 2 cut(s) | 3, 244 |
| ApeKI | GCWGC | 2 cut(s) | 275, 278 |
| AspS9I | GGNCC | 1 cut(s) | 244 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbvI | GCAGC | 1 cut(s) | 262 |
| BccI | CCATC | 1 cut(s) | 14 |
| BcuI | ACTAGT | 1 cut(s) | 43 |
| BfaI | CTAG | 3 cut(s) | 44, 122, 153 |
| BfmI | CTRYAG | 1 cut(s) | 276 |
| BglII | AGATCT | 1 cut(s) | 97 |
| BisI | GCNGC | 2 cut(s) | 276, 279 |
| BlsI | GCNGC | 2 cut(s) | 277, 280 |
| BmgT120I | GGNCC | 1 cut(s) | 244 |
| BmiI | GGNNCC | 2 cut(s) | 166, 211 |
| BsaJI | CCNNGG | 1 cut(s) | 214 |
| Bse1I | ACTGG | 1 cut(s) | 168 |
| BseDI | CCNNGG | 1 cut(s) | 214 |
| BseGI | GGATG | 1 cut(s) | 6 |
| BseNI | ACTGG | 1 cut(s) | 168 |
| BseRI | GAGGAG | 1 cut(s) | 241 |
| BseXI | GCAGC | 1 cut(s) | 262 |
| BshFI | GGCC | 2 cut(s) | 5, 246 |
| BsnI | GGCC | 2 cut(s) | 5, 246 |
| Bsp143I | GATC | 1 cut(s) | 97 |
| BspANI | GGCC | 2 cut(s) | 5, 246 |
| BspLI | GGNNCC | 2 cut(s) | 166, 211 |
| BspMAI | CTGCAG | 1 cut(s) | 280 |
| BsrI | ACTGG | 1 cut(s) | 168 |
| BssECI | CCNNGG | 1 cut(s) | 214 |
| BssMI | GATC | 1 cut(s) | 97 |
| BssT1I | CCWWGG | 1 cut(s) | 214 |
| Bst4CI | ACNGT | 2 cut(s) | 222, 260 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 272 |
| BstC8I | GCNNGC | 1 cut(s) | 128 |
| BstF5I | GGATG | 1 cut(s) | 6 |
| BstKTI | GATC | 1 cut(s) | 100 |
| BstMBI | GATC | 1 cut(s) | 97 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 272 |
| BstSFI | CTRYAG | 1 cut(s) | 276 |
| BstV1I | GCAGC | 1 cut(s) | 262 |
| BstX2I | RGATCY | 1 cut(s) | 97 |
| BstYI | RGATCY | 1 cut(s) | 97 |
| BsuRI | GGCC | 2 cut(s) | 5, 246 |
| BtsCI | GGATG | 1 cut(s) | 6 |
| BtsIMutI | CAGTG | 2 cut(s) | 59, 175 |
| Cac8I | GCNNGC | 1 cut(s) | 128 |
| Cfr13I | GGNCC | 1 cut(s) | 244 |
| Csp6I | GTAC | 1 cut(s) | 133 |
| CviAII | CATG | 2 cut(s) | 82, 136 |
| CviJI | RGCY | 5 cut(s) | 5, 31, 74, 89, 246 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 31, 74, 89, 246 |
| CviQI | GTAC | 1 cut(s) | 133 |
| DpnI | GATC | 1 cut(s) | 99 |
| DpnII | GATC | 1 cut(s) | 97 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 1 cut(s) | 214 |
| EcoT14I | CCWWGG | 1 cut(s) | 214 |
| ErhI | CCWWGG | 1 cut(s) | 214 |
| FaeI | CATG | 2 cut(s) | 85, 139 |
| FaiI | YATR | 3 cut(s) | 83, 111, 137 |
| FatI | CATG | 2 cut(s) | 81, 135 |
| Fnu4HI | GCNGC | 2 cut(s) | 276, 279 |
| Fsp4HI | GCNGC | 2 cut(s) | 276, 279 |
| FspBI | CTAG | 3 cut(s) | 44, 122, 153 |
| GluI | GCNGC | 2 cut(s) | 276, 279 |
| HaeIII | GGCC | 2 cut(s) | 5, 246 |
| Hin1II | CATG | 2 cut(s) | 85, 139 |
| Hpy188I | TCNGA | 2 cut(s) | 22, 105 |
| HpyCH4III | ACNGT | 2 cut(s) | 222, 260 |
| HpyCH4V | TGCA | 3 cut(s) | 146, 266, 278 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 272 |
| Hsp92II | CATG | 2 cut(s) | 85, 139 |
| Kzo9I | GATC | 1 cut(s) | 97 |
| LpnPI | CCDG | 1 cut(s) | 181 |
| Lsp1109I | GCAGC | 1 cut(s) | 262 |
| MaeI | CTAG | 3 cut(s) | 44, 122, 153 |
| MalI | GATC | 1 cut(s) | 99 |
| MboI | GATC | 1 cut(s) | 97 |
| MboII | GAAGA | 3 cut(s) | 35, 69, 92 |
| MflI | RGATCY | 1 cut(s) | 97 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MmeI | TCCRAC | 1 cut(s) | 34 |
| MnlI | CCTC | 2 cut(s) | 189, 262 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 1 cut(s) | 286 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 272 |
| NdeII | GATC | 1 cut(s) | 97 |
| NlaIII | CATG | 2 cut(s) | 85, 139 |
| NlaIV | GGNNCC | 2 cut(s) | 166, 211 |
| PkrI | GCNGC | 2 cut(s) | 277, 280 |
| PspN4I | GGNNCC | 2 cut(s) | 166, 211 |
| PspPI | GGNCC | 1 cut(s) | 244 |
| PstI | CTGCAG | 1 cut(s) | 280 |
| PsuI | RGATCY | 1 cut(s) | 97 |
| RsaI | GTAC | 1 cut(s) | 134 |
| RsaNI | GTAC | 1 cut(s) | 133 |
| SaqAI | TTAA | 1 cut(s) | 286 |
| SatI | GCNGC | 2 cut(s) | 276, 279 |
| Sau3AI | GATC | 1 cut(s) | 97 |
| Sau96I | GGNCC | 1 cut(s) | 244 |
| SetI | ASST | 2 cut(s) | 33, 181 |
| SfcI | CTRYAG | 1 cut(s) | 276 |
| SpeI | ACTAGT | 1 cut(s) | 43 |
| SspMI | CTAG | 3 cut(s) | 44, 122, 153 |
| StyI | CCWWGG | 1 cut(s) | 214 |
| TaaI | ACNGT | 2 cut(s) | 222, 260 |
| TatI | WGTACW | 1 cut(s) | 132 |
| Tru1I | TTAA | 1 cut(s) | 286 |
| Tru9I | TTAA | 1 cut(s) | 286 |
| TscAI | CASTG | 2 cut(s) | 59, 175 |
| TseI | GCWGC | 2 cut(s) | 275, 278 |
| TspDTI | ATGAA | 1 cut(s) | 51 |
| TspRI | CASTG | 2 cut(s) | 59, 175 |
| XspI | CTAG | 3 cut(s) | 44, 122, 153 |