Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008232

Physical Location & Seq

Genomic Coordinates Forward (+)

6829099 .. 6832040

Gene Structure 2942 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ42463

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGCGGGTTCGATTTATCCTATATCGCCGATACTGCACAAGTAATGCAATTTTCTCTAATTCTCAGATTTCTAGGTACGCTCGGCTTGGTCAAATCGAGAATGCCCGAATGGTGTTCGATGAAATGCCTGAGAGAACTACCGTGTCCTGGAACTCAATGATTGCGGGGTATTTTCAAAACAACCAACCCGGAGAAGCCCGAAAAATGTTTGATAGAATGCAGCTCAGGAACTTGGTTTCTTGGAACGGTTTGATATCCGGGTATATCAAGAATGGGATGGTTAGTGAGGCCCGGAAAGTGTTTGATTCAATGCCGGAGAGAAATGTTGTTTCGTGGACTTCGATGGTTAGAGGGTATGTGCAAGAGGGAAAGATTTCGGAAGCTGAGTCGCTTTTTTGGCAGATGCCTGGAAAGAATGTTGTTTCGTGGACGGTGATGTTGGGGGGACTGATTCAAGATGGCCGGGTGGATGAGGCTCGGAGGTTTTATGATTTGATGCCGGAGAAGGATGTCGTGGCAAGGACTAATATGATTGGTGGGTATTTTCAGGCAGGCCGCTTGGCTGAAGCGCGTGAGATTTTCGATGAGATGCCACGCAGGAATGTTGTTACATGGACTACGATGATATCTGGGTATGTGCAGAACCAACGCGTGGATGTTGCTAGGAAGCTTTTTGAAGTGATGCCAGAGAAGAATGAGGTTTCGTGGACGGCGATGCTGATGGGGTACACTCAGTGTGGACGGATCACAGAGGCTTCAGAGCTGTTTCGTGCAATGCCGGTTAAGTCAGTGGTTGCTTGTAATGCAATGATACTTGGGTATGGCCACAATGGGGAGGTAGAAGAAGCAAGGCAGGTTTTTGACAATATGAGAGAGAAAGATGATCAGACATGGAGTGCTATGATAAAAGTCTATGAACGGAAAGGTTTAGAATTGGAAGCACTTAAATTGTTTACTTTAATGCAAAGAGAAGGTGTTAGGCCCAATTTCCCTTCTCTGATAAGTCTTTTATCTGTTTGTGGAAGCTTGGCAACTCTTGATCATGGTACACAGATTCATGCCCAGTTGGTGAGAAACCAATTTGATCTTGATGTATATGTTGCCTCAGTTTTGATCACAATGTATGTTAAGTGTGGCAACCTTGTGAAGGCAAAACAGGTCTTCGACAGGTTTGGTGAAAGGGATGTTGTTATGTGGAACTCAATTATCACTGGTTATGCCCAACATGGTTTAGGAGAGGAAGCTTTACAAGTTTTTCAAAAGATGTGCTCTTTGGGGATACCACCAGATGATATCACCTTTATTGGAGTTCTTTCAGCATGTAGCTATTCTGGGAAGGTAGAACAAGGTCATGAGATTTTCGGGACAATGAAATCAAAGTATCAGGTCGAGCCAGGAACTGCACATTATGCCTGCATGGTTGATCTGCTTGGTCGAGCAGGCCAGGTAAAACAGGCAATGGATTTAATAGAGAAAATGCCAGTGGAAGCAGATGCCATTGTTTGGGGTGCATTATTAGGTGCATGCAGAACGCATATGAAGTTGGATTTGGCGGAAGTTGCGGCAAAAAAACTTATACAGCTAGAGCCCCACAATGCAGGACATTATATCTTGCTATCAAATATGTATGCATCCAAAGGTAGATGGCATGAGGTTGCAGACCTGAGGAAAACGATGGGAGCCAAAAGTATTACCAAGTCACCTGGCTGTAGCTGGATTGAGGTGGAACATAAAGTACATATGTTTACTTGGGGAGAGACCACAGGCCACCCAGAGCATGTGATGATCATGAGAATGTTAGAGAGACTAGGTGTATTGTTAAGAGAAGCTGGGTACTGCCCTGACAGCAGCTTTGTGTTGCATGATGTGGATGAAGAAGAGAAGGTCCAGAGCTTGGGTTATCACAGTGAGAAGCTGGCAATAGCGTATGGACTCCTTAAGGTGCCACAAGGGATGCCCATTCGGGTGATGAAAAATCTTCGGGTATGTGGGGATTGCCATTCTGCAATTAAACTAATAGCCAAAGTTACTGGGAGAGAGATCATTGTGAGGGATGCTAACAGATTTCATCATTTTAAGGATGGCTTGTGTTCTTGCCGAGACTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

703

Amino Acids

79.81

Weight (kDa)

8.23

Isoelectric Point (pI)

35.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	46 - 77	1.2e-06	PPR repeat family
PPR	PF01535	48 - 77	1.6e-07	PPR repeat
PPR_2	PF13041	77 - 109	4e-07	PPR repeat family
PPR	PF01535	79 - 109	1.8e-08	PPR repeat
PPR	PF01535	110 - 140	3.6e-07	PPR repeat
PPR_2	PF13041	200 - 232	3.5e-07	PPR repeat family
PPR_1	PF12854	201 - 228	3.6e-06	PPR repeat
PPR	PF01535	203 - 232	1.8e-06	PPR repeat
PPR_2	PF13041	263 - 293	2e-06	PPR repeat family
PPR	PF01535	265 - 293	1.9e-06	PPR repeat
PPR_2	PF13041	394 - 441	4e-12	PPR repeat family
PPR	PF01535	397 - 427	1.1e-08	PPR repeat
E_motif	PF20431	512 - 574	2e-21	E motif
DYW_deaminase	PF14432	611 - 703	8.7e-44	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09410 AT1G56690
fragaria_vesca	FvH4_6g08090 FvH4_6g08090
malus_domestica	MD08G1248600.v1.1 MD12G1084600.v1.1 MD12G1084700.v1.1 MD14G1079300.v1.1
prunus_persica	Prupe.7G064700_v2.0.a1 Prupe.7G064700_v2.0.a1 Prupe.7G064700_v2.0.a1
pyrus_communis	pycom12g07180 pycom14g06800
rosa_chinensis	RchiOBHm_Chr3g0457821 RchiOBHm_Chr3g0457911
rosa_laevigata	RLG00000025187
rosa_multiflora	Rmu_sc0012092.1_g000010 Rmu_ssc0000446.1_g000002
rosa_roxburghii	Rroxscaffold_6G00421480
rosa_rugosa	Rorug03G0023400
rosa_samantha	Rh3BG086500 Rh3DG087400
rosa_wichuraiana	Rw0G012310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	844
AccB1I	GGYRCC	1 cut(s)	1942
AccB7I	CCANNNNNTGG	3 cut(s)	652, 1503, 1894
AccII	CGCG	2 cut(s)	571, 651
AciI	CCGC	5 cut(s)	4, 164, 556, 1553, 1562
AclWI	GGATC	1 cut(s)	752
AcoI	YGGCCR	2 cut(s)	460, 823
AcuI	CTGAAG	2 cut(s)	585, 741
AdeI	CACNNNGTG	1 cut(s)	735
AfaI	GTAC	5 cut(s)	77, 728, 1048, 1737, 1835
AfiI	CCNNNNNNNGG	6 cut(s)	147, 652, 832, 1147, 1503, 1894
AflII	CTTAAG	1 cut(s)	1937
AflIII	ACRYGT	1 cut(s)	649
AgsI	TTSAA	5 cut(s)	176, 309, 455, 677, 1259
AjnI	CCWGG	5 cut(s)	146, 406, 1393, 1443, 1702
AjuI	GAANNNNNNNTTGG	2 cut(s)	1532, 1564
Alw21I	GWGCWC	1 cut(s)	1271
Alw26I	GTCTC	3 cut(s)	1751, 1798, 2094
AlwI	GGATC	1 cut(s)	752
AlwNI	CAGNNNCTG	1 cut(s)	1400
AoxI	GGCC	7 cut(s)	288, 460, 553, 823, 980, 1441, 1765
ApeKI	GCWGC	2 cut(s)	220, 1848
ArsI	GACNNNNNNTTYG	2 cut(s)	1835, 1867
Asp700I	GAANNNNTTC	1 cut(s)	373
AspLEI	GCGC	1 cut(s)	571
AspS9I	GGNCC	3 cut(s)	289, 981, 1885
AsuC2I	CCSGG	4 cut(s)	189, 259, 292, 464
AsuHPI	GGTGA	6 cut(s)	445, 1081, 1187, 1288, 1692, 1978
AvaII	GGWCC	1 cut(s)	1885
AxyI	CCTNAGG	1 cut(s)	1664
BaeI	ACNNNNGTAYC	2 cut(s)	803, 836
BalI	TGGCCA	1 cut(s)	825
BanI	GGYRCC	1 cut(s)	1942
BanII	GRGCYC	1 cut(s)	1590
BbsI	GAAGAC	1 cut(s)	1153
Bbv12I	GWGCWC	1 cut(s)	1271
BbvI	GCAGC	2 cut(s)	232, 1860
BccI	CCATC	7 cut(s)	271, 337, 452, 715, 1638, 1669, 2075
BceAI	ACGGC	1 cut(s)	726
BciT130I	CCWGG	5 cut(s)	148, 408, 1395, 1445, 1704
BciVI	GTATCC	1 cut(s)	1272
BclI	TGATCA	4 cut(s)	883, 1039, 1113, 1785
BcnI	CCSGG	4 cut(s)	189, 259, 292, 464
BcoDI	GTCTC	3 cut(s)	1751, 1798, 2094
BfaI	CTAG	4 cut(s)	72, 663, 1583, 1808
BfmI	CTRYAG	1 cut(s)	1708
BfrI	CTTAAG	1 cut(s)	1937
BfuAI	ACCTGC	1 cut(s)	844
BfuI	GTATCC	1 cut(s)	1272
BisI	GCNGC	4 cut(s)	221, 556, 1563, 1849
BlsI	GCNGC	4 cut(s)	222, 557, 1564, 1850
Bme1390I	CCNGG	9 cut(s)	148, 189, 259, 292, 408, 464, 1395, 1445, 1704
Bme18I	GGWCC	1 cut(s)	1885
BmgT120I	GGNCC	3 cut(s)	289, 981, 1885
BmiI	GGNNCC	2 cut(s)	1681, 1944
BmrFI	CCNGG	9 cut(s)	148, 189, 259, 292, 408, 464, 1395, 1445, 1704
BmrI	ACTGGG	2 cut(s)	1057, 2040
BmsI	GCATC	9 cut(s)	393, 486, 579, 672, 705, 1483, 1640, 1944, 2044
BmuI	ACTGGG	2 cut(s)	1057, 2040
BpiI	GAAGAC	1 cut(s)	1153
Bpu10I	CCTNAGC	1 cut(s)	224
BpuMI	CCSGG	4 cut(s)	189, 259, 292, 464
BsaI	GGTCTC	1 cut(s)	1751
Bsc4I	CCNNNNNNNGG	6 cut(s)	147, 652, 832, 1147, 1503, 1894
Bse118I	RCCGGY	1 cut(s)	778
Bse1I	ACTGG	4 cut(s)	1063, 1216, 1481, 2035
Bse21I	CCTNAGG	1 cut(s)	1664
Bse3DI	GCAATG	3 cut(s)	780, 813, 1464
BseBI	CCWGG	5 cut(s)	148, 408, 1395, 1445, 1704
BseLI	CCNNNNNNNGG	6 cut(s)	147, 652, 832, 1147, 1503, 1894
BseMI	GCAATG	3 cut(s)	780, 813, 1464
BseMII	CTCAG	7 cut(s)	77, 120, 238, 375, 746, 1119, 1655
BseNI	ACTGG	4 cut(s)	1063, 1216, 1481, 2035
BseXI	GCAGC	2 cut(s)	232, 1860
BseYI	CCCAGC	1 cut(s)	1829
BsgI	GTGCAG	3 cut(s)	19, 659, 1386
Bsh1236I	CGCG	2 cut(s)	571, 651
BshFI	GGCC	7 cut(s)	290, 462, 555, 825, 982, 1443, 1767
BshNI	GGYRCC	1 cut(s)	1942
BsiHKAI	GWGCWC	1 cut(s)	1271
BsiSI	CCGG	7 cut(s)	189, 258, 292, 314, 463, 500, 779
BslFI	GGGAC	2 cut(s)	459, 1378
BslI	CCNNNNNNNGG	6 cut(s)	147, 652, 832, 1147, 1503, 1894
BsmAI	GTCTC	3 cut(s)	1751, 1798, 2094
BsmFI	GGGAC	2 cut(s)	459, 1378
BsmI	GAATGC	2 cut(s)	106, 222
BsnI	GGCC	7 cut(s)	290, 462, 555, 825, 982, 1443, 1767
Bso31I	GGTCTC	1 cut(s)	1751
Bsp1286I	GDGCHC	2 cut(s)	1271, 1590
Bsp143I	GATC	8 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1785, 2040
BspACI	CCGC	5 cut(s)	4, 164, 556, 1553, 1562
BspANI	GGCC	7 cut(s)	290, 462, 555, 825, 982, 1443, 1767
BspCNI	CTCAG	7 cut(s)	76, 121, 237, 376, 745, 1118, 1656
BspFNI	CGCG	2 cut(s)	571, 651
BspHI	TCATGA	2 cut(s)	1351, 1788
BspLI	GGNNCC	2 cut(s)	1681, 1944
BspMI	ACCTGC	1 cut(s)	844
BspPI	GGATC	1 cut(s)	752
BspT107I	GGYRCC	1 cut(s)	1942
BspTI	CTTAAG	1 cut(s)	1937
BspTNI	GGTCTC	1 cut(s)	1751
BsrDI	GCAATG	3 cut(s)	780, 813, 1464
BsrFI	RCCGGY	1 cut(s)	778
BsrI	ACTGG	4 cut(s)	1063, 1216, 1481, 2035
BssAI	RCCGGY	1 cut(s)	778
BssMI	GATC	8 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1785, 2040
Bst2UI	CCWGG	5 cut(s)	148, 408, 1395, 1445, 1704
Bst4CI	ACNGT	4 cut(s)	142, 248, 433, 1907
Bst6I	CTCTTC	1 cut(s)	1872
BstAFI	CTTAAG	1 cut(s)	1937
BstAPI	GCANNNNNTGC	1 cut(s)	1409
BstC8I	GCNNGC	5 cut(s)	553, 1414, 1441, 1525, 1917
BstDEI	CTNAG	7 cut(s)	63, 129, 224, 384, 732, 1105, 1664
BstENI	CCTNNNNNAGG	1 cut(s)	1145
BstFNI	CGCG	2 cut(s)	571, 651
BstHHI	GCGC	1 cut(s)	571
BstKTI	GATC	8 cut(s)	747, 886, 1042, 1087, 1116, 1426, 1788, 2043
BstMAI	GTCTC	3 cut(s)	1751, 1798, 2094
BstMBI	GATC	8 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1785, 2040
BstMWI	GCNNNNNNNGC	6 cut(s)	33, 397, 803, 1409, 1559, 1845
BstNI	CCWGG	5 cut(s)	148, 408, 1395, 1445, 1704
BstNSI	RCATGY	3 cut(s)	1323, 1527, 1781
BstSCI	CCNGG	9 cut(s)	146, 187, 257, 290, 406, 462, 1393, 1443, 1702
BstSFI	CTRYAG	1 cut(s)	1708
BstUI	CGCG	2 cut(s)	571, 651
BstV1I	GCAGC	2 cut(s)	232, 1860
BstV2I	GAAGAC	1 cut(s)	1153
Bsu36I	CCTNAGG	1 cut(s)	1664
BsuI	GTATCC	1 cut(s)	1272
BsuRI	GGCC	7 cut(s)	290, 462, 555, 825, 982, 1443, 1767
BtgZI	GCGATG	1 cut(s)	728
BtsIMutI	CAGTG	5 cut(s)	740, 795, 1209, 1488, 1912
BveI	ACCTGC	1 cut(s)	844
Cac8I	GCNNGC	5 cut(s)	553, 1414, 1441, 1525, 1917
CaiI	CAGNNNCTG	1 cut(s)	1400
CciI	TCATGA	2 cut(s)	1351, 1788
CfoI	GCGC	1 cut(s)	571
Cfr10I	RCCGGY	1 cut(s)	778
Cfr13I	GGNCC	3 cut(s)	289, 981, 1885
Csp6I	GTAC	5 cut(s)	76, 727, 1047, 1736, 1834
CviQI	GTAC	5 cut(s)	76, 727, 1047, 1736, 1834
DdeI	CTNAG	7 cut(s)	63, 129, 224, 384, 732, 1105, 1664
DpnI	GATC	8 cut(s)	746, 885, 1041, 1086, 1115, 1425, 1787, 2042
DpnII	GATC	8 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1785, 2040
DraIII	CACNNNGTG	1 cut(s)	735
EaeI	YGGCCR	2 cut(s)	460, 823
Eam1104I	CTCTTC	1 cut(s)	1872
EarI	CTCTTC	1 cut(s)	1872
EciI	GGCGGA	1 cut(s)	1568
Eco24I	GRGCYC	1 cut(s)	1590
Eco31I	GGTCTC	1 cut(s)	1751
Eco32I	GATATC	3 cut(s)	255, 627, 1294
Eco47I	GGWCC	1 cut(s)	1885
Eco57I	CTGAAG	2 cut(s)	585, 741
Eco81I	CCTNAGG	1 cut(s)	1664
EcoNI	CCTNNNNNAGG	1 cut(s)	1145
EcoRII	CCWGG	5 cut(s)	146, 406, 1393, 1443, 1702
EcoRV	GATATC	3 cut(s)	255, 627, 1294
EcoT22I	ATGCAT	1 cut(s)	1633
EcoT38I	GRGCYC	1 cut(s)	1590
FalI	AAGNNNNNCTT	2 cut(s)	2069, 2101
FaqI	GGGAC	2 cut(s)	459, 1378
FauI	CCCGC	1 cut(s)	157
FauNDI	CATATG	2 cut(s)	1536, 1740
FbaI	TGATCA	4 cut(s)	883, 1039, 1113, 1785
Fnu4HI	GCNGC	4 cut(s)	221, 556, 1563, 1849
FriOI	GRGCYC	1 cut(s)	1590
Fsp4HI	GCNGC	4 cut(s)	221, 556, 1563, 1849
FspBI	CTAG	4 cut(s)	72, 663, 1583, 1808
GlaI	GCGC	1 cut(s)	570
GluI	GCNGC	4 cut(s)	221, 556, 1563, 1849
GsaI	CCCAGC	1 cut(s)	1833
HaeIII	GGCC	7 cut(s)	290, 462, 555, 825, 982, 1443, 1767
HapII	CCGG	7 cut(s)	189, 258, 292, 314, 463, 500, 779
HhaI	GCGC	1 cut(s)	571
Hin6I	GCGC	1 cut(s)	569
HinP1I	GCGC	1 cut(s)	569
HindIII	AAGCTT	3 cut(s)	668, 1024, 1242
HinfI	GANTC	5 cut(s)	305, 386, 451, 1054, 1932
HpaII	CCGG	7 cut(s)	189, 258, 292, 314, 463, 500, 779
HphI	GGTGA	6 cut(s)	445, 1081, 1187, 1288, 1692, 1978
Hpy166II	GTNNAC	8 cut(s)	336, 429, 708, 729, 740, 954, 1049, 1746
Hpy188I	TCNGA	6 cut(s)	66, 379, 480, 760, 888, 999
Hpy8I	GTNNAC	8 cut(s)	336, 429, 708, 729, 740, 954, 1049, 1746
HpyAV	CCTTC	6 cut(s)	499, 965, 1002, 1141, 1330, 1876
HpyCH4III	ACNGT	4 cut(s)	142, 248, 433, 1907
HpyF10VI	GCNNNNNNNGC	6 cut(s)	33, 397, 803, 1409, 1559, 1845
HpyF3I	CTNAG	7 cut(s)	63, 129, 224, 384, 732, 1105, 1664
HspAI	GCGC	1 cut(s)	569
Ksp22I	TGATCA	4 cut(s)	883, 1039, 1113, 1785
Kzo9I	GATC	8 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1785, 2040
LmnI	GCTCC	1 cut(s)	1679
Lsp1109I	GCAGC	2 cut(s)	232, 1860
LweI	GCATC	9 cut(s)	393, 486, 579, 672, 705, 1483, 1640, 1944, 2044
MaeI	CTAG	4 cut(s)	72, 663, 1583, 1808
MaeIII	GTNAC	3 cut(s)	607, 1698, 2026
MalI	GATC	8 cut(s)	746, 885, 1041, 1086, 1115, 1425, 1787, 2042
MboI	GATC	8 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1785, 2040
MboII	GAAGA	6 cut(s)	703, 854, 1153, 1886, 1889, 1970
MhlI	GDGCHC	2 cut(s)	1271, 1590
MlsI	TGGCCA	1 cut(s)	825
MluCI	AATT	8 cut(s)	48, 58, 932, 947, 985, 1079, 1203, 2007
MluI	ACGCGT	1 cut(s)	649
MluNI	TGGCCA	1 cut(s)	825
MlyI	GAGTC	2 cut(s)	395, 1926
MmeI	TCCRAC	1 cut(s)	1524
Mox20I	TGGCCA	1 cut(s)	825
Mph1103I	ATGCAT	1 cut(s)	1633
MroXI	GAANNNNTTC	1 cut(s)	373
MscI	TGGCCA	1 cut(s)	825
MseI	TTAA	9 cut(s)	783, 945, 959, 1128, 1466, 1820, 1938, 2010, 2076
MslI	CAYNNNNRTG	2 cut(s)	1793, 1964
Msp20I	TGGCCA	1 cut(s)	825
MspCI	CTTAAG	1 cut(s)	1937
MspI	CCGG	7 cut(s)	189, 258, 292, 314, 463, 500, 779
MspR9I	CCNGG	9 cut(s)	148, 189, 259, 292, 408, 464, 1395, 1445, 1704
Mva1269I	GAATGC	2 cut(s)	106, 222
MvaI	CCWGG	5 cut(s)	148, 408, 1395, 1445, 1704
MvnI	CGCG	2 cut(s)	571, 651
MwoI	GCNNNNNNNGC	6 cut(s)	33, 397, 803, 1409, 1559, 1845
NciI	CCSGG	4 cut(s)	189, 259, 292, 464
NdeI	CATATG	2 cut(s)	1536, 1740
NdeII	GATC	8 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1785, 2040
NlaIV	GGNNCC	2 cut(s)	1681, 1944
NmeAIII	GCCGAG	1 cut(s)	61
NmuCI	GTSAC	1 cut(s)	1698
NsiI	ATGCAT	1 cut(s)	1633
NspI	RCATGY	3 cut(s)	1323, 1527, 1781
PaeI	GCATGC	1 cut(s)	1527
PagI	TCATGA	2 cut(s)	1351, 1788
PcsI	WCGNNNNNNNCGW	2 cut(s)	338, 710
PctI	GAATGC	2 cut(s)	106, 222
PdmI	GAANNNNTTC	1 cut(s)	373
PfeI	GAWTC	3 cut(s)	305, 451, 1054
PflMI	CCANNNNNTGG	3 cut(s)	652, 1503, 1894
PfoI	TCCNGGA	1 cut(s)	146
PkrI	GCNGC	4 cut(s)	222, 557, 1564, 1850
PleI	GAGTC	2 cut(s)	394, 1926
PpsI	GAGTC	2 cut(s)	394, 1926
Psp6I	CCWGG	5 cut(s)	146, 406, 1393, 1443, 1702
PspFI	CCCAGC	1 cut(s)	1829
PspGI	CCWGG	5 cut(s)	146, 406, 1393, 1443, 1702
PspN4I	GGNNCC	2 cut(s)	1681, 1944
PspPI	GGNCC	3 cut(s)	289, 981, 1885
PsrI	GAACNNNNNNTAC	2 cut(s)	1719, 1751
PstNI	CAGNNNCTG	1 cut(s)	1400
RsaI	GTAC	5 cut(s)	77, 728, 1048, 1737, 1835
RsaNI	GTAC	5 cut(s)	76, 727, 1047, 1736, 1834
RseI	CAYNNNNRTG	2 cut(s)	1793, 1964
SaqAI	TTAA	9 cut(s)	783, 945, 959, 1128, 1466, 1820, 1938, 2010, 2076
SatI	GCNGC	4 cut(s)	221, 556, 1563, 1849
Sau3AI	GATC	8 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1785, 2040
Sau96I	GGNCC	3 cut(s)	289, 981, 1885
SchI	GAGTC	2 cut(s)	395, 1926
ScrFI	CCNGG	9 cut(s)	148, 189, 259, 292, 408, 464, 1395, 1445, 1704
SduI	GDGCHC	2 cut(s)	1271, 1590
SfaNI	GCATC	9 cut(s)	393, 486, 579, 672, 705, 1483, 1640, 1944, 2044
SfcI	CTRYAG	1 cut(s)	1708
SinI	GGWCC	1 cut(s)	1885
SmiMI	CAYNNNNRTG	2 cut(s)	1793, 1964
SmlI	CTYRAG	1 cut(s)	1937
SmoI	CTYRAG	1 cut(s)	1937
SphI	GCATGC	1 cut(s)	1527
Sse9I	AATT	8 cut(s)	48, 58, 932, 947, 985, 1079, 1203, 2007
SsiI	CCGC	5 cut(s)	4, 164, 556, 1553, 1562
SspMI	CTAG	4 cut(s)	72, 663, 1583, 1808
StyD4I	CCNGG	9 cut(s)	146, 187, 257, 290, 406, 462, 1393, 1443, 1702
TaaI	ACNGT	4 cut(s)	142, 248, 433, 1907
TaqI	TCGA	8 cut(s)	10, 96, 117, 341, 582, 1164, 1389, 1435
TasI	AATT	8 cut(s)	48, 58, 932, 947, 985, 1079, 1203, 2007
TatI	WGTACW	1 cut(s)	1735
TauI	GCSGC	2 cut(s)	558, 1565
TfiI	GAWTC	3 cut(s)	305, 451, 1054
Tru1I	TTAA	9 cut(s)	783, 945, 959, 1128, 1466, 1820, 1938, 2010, 2076
Tru9I	TTAA	9 cut(s)	783, 945, 959, 1128, 1466, 1820, 1938, 2010, 2076
TscAI	CASTG	5 cut(s)	740, 795, 1216, 1488, 1912
TseFI	GTSAC	1 cut(s)	1698
TseI	GCWGC	2 cut(s)	220, 1848
Tsp45I	GTSAC	1 cut(s)	1698
TspDTI	ATGAA	8 cut(s)	135, 930, 1046, 1385, 1553, 1887, 1985, 2057
TspGWI	ACGGA	2 cut(s)	757, 934
TspRI	CASTG	5 cut(s)	740, 795, 1216, 1488, 1912
Van91I	CCANNNNNTGG	3 cut(s)	652, 1503, 1894
Vha464I	CTTAAG	1 cut(s)	1937
VpaK11BI	GGWCC	1 cut(s)	1885
XagI	CCTNNNNNAGG	1 cut(s)	1145
XceI	RCATGY	3 cut(s)	1323, 1527, 1781
XmnI	GAANNNNTTC	1 cut(s)	373
XspI	CTAG	4 cut(s)	72, 663, 1583, 1808
Zsp2I	ATGCAT	1 cut(s)	1633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.