Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0008232

Physical Location & Seq

Genomic Coordinates Reverse (-)

42873641 .. 42876107

Gene Structure 2467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025187

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGTGGGTTCGATATATCCTATATCGCCGATACTGCACAAGTACTACAATTTTCTCTAATTCTCAGATTTCTAGATGCGCTCGGCTTGGTCAAATCGAGAATGCCCGAAAGGTGTTCGATGAAATGTCCGAGAGAACAACCGTGTCCTGGAACTCAATGATTGCGGGGTATTTTCAAAACAATCAACCCGAGGAAGCCCGAAAAATGTTTGATAGAATGCAACTTAGAAACTTGGTTTCTTGGAACGGTTTGATATCCGGGTATATCAAGAATGGGATGGTTAGTGAGGCCCGGAAAGTGTTTGATTCAATGCCGGAGAGAAATGTTGTTTCGTGGACTTCAATGGTTAGAGGGTATGTGCAAGAGGGCAAAATTTCGGAAGCTGAGTCGCTTTTTTGGCAGATGCCTGGAAAGAATGTTGTTTCGTGGACGGTGATGTTGGGGGGACTGATTCAAGATGGCCGGGTTGATGAGGCTCGGAGGTTTTATGATTTGATGCCGGAGAAGGATGTCGTGGCAAGGACTAATATGATTGGTGGGTATTTTCAGGCAGGCCGCTTGGCTGAAGCGCGTGAGATTTTCGATGAGATGCCATGCAGGAATGTTGTTACTTGGACTACGATGATATCTGGGTATGTGCAGAACCAACGGGTGGATATTGCTAGGAAGCTTTTTGAAGTGATGCCAGAGAAGAATGAGGTTTCATGGACGGCAATGCTGATGGGGTACACTCAGTGTGGACGGATCACAGAGGCTTCAGAGCTGTTTTGTGCAATGCCGGTTAAGTCAGTTGTTGCTTGTAACGCAATGATACTTGGGTATGGCCACAATGGGGAGGTGGAAGAAGCAAGGCAGGTTTTTGACAATATGAGAGAGAAAGATGATCAGACATGGAGTGCTATGATAAAAGTCTATGAACGGAAAGGTTTAGAATTGGAAGCACTTAAATTGTTTACTTTAATGCAAAGAGAAGGTGTTAGGCCCAATTTCCCTTCTCTGATAAGTCTTTTATCTGTTTGTGGAAGCTTGGCAACTCTTGATCATGGTACACAGATTCATGCCCAGTTGGTGAGAAACCAATTTGATCTTGATGTATATGTTGCCTCAGTTTTGATCACAATGTATGTTAAGTGTGGCAACCTTGTGAAGGCAAAACAGGTCTTCGACAGGTTTGGTGAAAAGGATGTTGTTATGTGGAATTCAATTATCACTGGTTATGCCCAACATGGTTTAGGAGAGGAAGCTTTACAAGTTTTTCAAAAGATGTGCTCTTTGGGGATACCACCAGATGATGTCACCTTTATTGGAGTTCTTTCAGCATGTAGCTATTCTGGGAAGGTAGAACAAGGTCATGAGATTTTCAGGACAATGAAATCAAAGTATCAGGTCGAGCCAGGAACTGCACATTATGCCTGCATGGTTGATCTGCTTGGTCGAGCAGGCCAGAGACTAGGTGTATTGTTAAGAGAAGCTGGGTACTGTCCTGATAGCAGCTTTGTGTTGCATGATGTGGATGAAGAAGAGAAGGTCCAGAGCTTGGGTTATCACAGTGAGAAGCTGGCTATAGCGTATGGACTCCTTAAGGTGCCACAAGGGATGCCCATTCGGGTGATGAAGAATCTTCGGAACCTTGTGCTGAGGATAGATCCTACAGCAGATTGTACATACCCAAATTTATTGTCTCAACTCTTCACTGTCCAAAAGATTAATTCAGCTTCAAAACTTCAGAGTAAGGCCTATCATGATGGGTCTGAATTTGAAACGGCCTTACTCCGAAGTACTTTAAAGAGTAGACACCATGCTATAACTGCTTACAGAGTTCATATGTTAATTCAGAGCCAGAACATGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

618

Amino Acids

70.11

Weight (kDa)

8.11

Isoelectric Point (pI)

36.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	46 - 77	1.4e-07	PPR repeat family
PPR	PF01535	48 - 77	1.3e-08	PPR repeat
PPR_2	PF13041	77 - 109	3.4e-07	PPR repeat family
PPR	PF01535	79 - 109	1.6e-08	PPR repeat
PPR	PF01535	110 - 140	3.1e-07	PPR repeat
PPR_2	PF13041	200 - 232	4.1e-07	PPR repeat family
PPR_1	PF12854	200 - 228	3.3e-06	PPR repeat
PPR	PF01535	203 - 232	2e-06	PPR repeat
PPR_2	PF13041	263 - 293	1.7e-06	PPR repeat family
PPR	PF01535	265 - 293	1.6e-06	PPR repeat
PPR_2	PF13041	394 - 441	1.6e-12	PPR repeat family
PPR	PF01535	397 - 427	9.1e-09	PPR repeat
DYW_deaminase	PF14432	492 - 542	1e-15	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09410 AT1G56690
fragaria_vesca	FvH4_6g08090 FvH4_6g08090
malus_domestica	MD08G1248600.v1.1 MD12G1084600.v1.1 MD12G1084700.v1.1 MD14G1079300.v1.1
prunus_persica	Prupe.7G064700_v2.0.a1 Prupe.7G064700_v2.0.a1 Prupe.7G064700_v2.0.a1
pyrus_communis	pycom12g07180 pycom14g06800
rosa_chinensis	RchiOBHm_Chr3g0457821 RchiOBHm_Chr3g0457911
rosa_laevigata	RLG00000025187
rosa_multiflora	Rmu_sc0012092.1_g000010 Rmu_ssc0000446.1_g000002
rosa_roxburghii	Rroxscaffold_6G00421480
rosa_rugosa	Rorug03G0023400
rosa_samantha	Rh3BG086500 Rh3DG087400
rosa_wichuraiana	Rw0G012310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	844
AccB1I	GGYRCC	1 cut(s)	1585
AccB7I	CCANNNNNTGG	2 cut(s)	652, 1537
AccI	GTMKAC	1 cut(s)	1792
AccII	CGCG	1 cut(s)	571
AciI	CCGC	2 cut(s)	164, 556
AclWI	GGATC	2 cut(s)	752, 1640
AcoI	YGGCCR	2 cut(s)	460, 823
AcsI	RAATTY	4 cut(s)	372, 1198, 1672, 1754
AcuI	CTGAAG	3 cut(s)	585, 741, 1709
AdeI	CACNNNGTG	1 cut(s)	735
AfaI	GTAC	6 cut(s)	43, 728, 1048, 1478, 1663, 1780
AfiI	CCNNNNNNNGG	5 cut(s)	147, 652, 832, 1147, 1537
AflII	CTTAAG	1 cut(s)	1580
AgsI	TTSAA	9 cut(s)	176, 309, 342, 455, 677, 1203, 1259, 1719, 1760
AjnI	CCWGG	3 cut(s)	146, 406, 1393
Alw21I	GWGCWC	1 cut(s)	1271
Alw26I	GTCTC	2 cut(s)	1441, 1686
AlwI	GGATC	2 cut(s)	752, 1640
AlwNI	CAGNNNCTG	1 cut(s)	1400
Ama87I	CYCGRG	1 cut(s)	188
AoxI	GGCC	8 cut(s)	288, 460, 553, 823, 980, 1441, 1734, 1764
ApeKI	GCWGC	1 cut(s)	1491
ApoI	RAATTY	4 cut(s)	372, 1198, 1672, 1754
ArsI	GACNNNNNNTTYG	2 cut(s)	1664, 1696
AseI	ATTAAT	1 cut(s)	1707
AspLEI	GCGC	2 cut(s)	80, 571
AspS9I	GGNCC	3 cut(s)	289, 981, 1528
AsuC2I	CCSGG	3 cut(s)	259, 292, 464
AsuHPI	GGTGA	5 cut(s)	445, 1081, 1187, 1288, 1621
AvaI	CYCGRG	1 cut(s)	188
AvaII	GGWCC	1 cut(s)	1528
BaeI	ACNNNNGTAYC	2 cut(s)	803, 836
BalI	TGGCCA	1 cut(s)	825
BanI	GGYRCC	1 cut(s)	1585
BbsI	GAAGAC	1 cut(s)	1153
Bbv12I	GWGCWC	1 cut(s)	1271
BbvCI	CCTCAGC	1 cut(s)	1637
BbvI	GCAGC	1 cut(s)	1503
BccI	CCATC	4 cut(s)	271, 452, 715, 1739
BceAI	ACGGC	2 cut(s)	726, 1779
BciT130I	CCWGG	3 cut(s)	148, 408, 1395
BciVI	GTATCC	1 cut(s)	1272
BclI	TGATCA	3 cut(s)	883, 1039, 1113
BcnI	CCSGG	3 cut(s)	259, 292, 464
BcoDI	GTCTC	2 cut(s)	1441, 1686
BfaI	CTAG	3 cut(s)	72, 663, 1451
BfmI	CTRYAG	2 cut(s)	1563, 1650
BfrI	CTTAAG	1 cut(s)	1580
BfuAI	ACCTGC	1 cut(s)	844
BfuI	GTATCC	1 cut(s)	1272
BisI	GCNGC	2 cut(s)	556, 1492
BlsI	GCNGC	2 cut(s)	557, 1493
BmcAI	AGTACT	2 cut(s)	43, 1780
Bme1390I	CCNGG	6 cut(s)	148, 259, 292, 408, 464, 1395
Bme18I	GGWCC	1 cut(s)	1528
BmeT110I	CYCGRG	1 cut(s)	188
BmgT120I	GGNCC	3 cut(s)	289, 981, 1528
BmiI	GGNNCC	2 cut(s)	1587, 1628
BmrFI	CCNGG	6 cut(s)	148, 259, 292, 408, 464, 1395
BmrI	ACTGGG	1 cut(s)	1057
BmsI	GCATC	6 cut(s)	65, 393, 486, 579, 672, 1587
BmuI	ACTGGG	1 cut(s)	1057
BpiI	GAAGAC	1 cut(s)	1153
Bpu10I	CCTNAGC	1 cut(s)	1637
BpuMI	CCSGG	3 cut(s)	259, 292, 464
BsaJI	CCNNGG	1 cut(s)	189
Bsc4I	CCNNNNNNNGG	5 cut(s)	147, 652, 832, 1147, 1537
Bse118I	RCCGGY	1 cut(s)	778
Bse1I	ACTGG	2 cut(s)	1063, 1216
Bse3DI	GCAATG	3 cut(s)	720, 780, 813
BseBI	CCWGG	3 cut(s)	148, 408, 1395
BseDI	CCNNGG	1 cut(s)	189
BseGI	GGATG	5 cut(s)	282, 514, 1189, 1519, 1602
BseLI	CCNNNNNNNGG	5 cut(s)	147, 652, 832, 1147, 1537
BseMI	GCAATG	3 cut(s)	720, 780, 813
BseMII	CTCAG	5 cut(s)	77, 375, 746, 1119, 1628
BseNI	ACTGG	2 cut(s)	1063, 1216
BseXI	GCAGC	1 cut(s)	1503
BseYI	CCCAGC	1 cut(s)	1472
BsgI	GTGCAG	3 cut(s)	19, 659, 1386
Bsh1236I	CGCG	1 cut(s)	571
BshFI	GGCC	8 cut(s)	290, 462, 555, 825, 982, 1443, 1736, 1766
BshNI	GGYRCC	1 cut(s)	1585
BsiHKAI	GWGCWC	1 cut(s)	1271
BsiHKCI	CYCGRG	1 cut(s)	188
BsiSI	CCGG	6 cut(s)	258, 292, 314, 463, 500, 779
BslFI	GGGAC	1 cut(s)	459
BslI	CCNNNNNNNGG	5 cut(s)	147, 652, 832, 1147, 1537
BsmAI	GTCTC	2 cut(s)	1441, 1686
BsmFI	GGGAC	1 cut(s)	459
BsmI	GAATGC	2 cut(s)	106, 222
BsnI	GGCC	8 cut(s)	290, 462, 555, 825, 982, 1443, 1736, 1766
BsoBI	CYCGRG	1 cut(s)	188
Bsp1286I	GDGCHC	1 cut(s)	1271
Bsp1407I	TGTACA	1 cut(s)	1661
Bsp143I	GATC	7 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1645
BspACI	CCGC	2 cut(s)	164, 556
BspANI	GGCC	8 cut(s)	290, 462, 555, 825, 982, 1443, 1736, 1766
BspCNI	CTCAG	5 cut(s)	76, 376, 745, 1118, 1629
BspFNI	CGCG	1 cut(s)	571
BspHI	TCATGA	2 cut(s)	1351, 1741
BspLI	GGNNCC	2 cut(s)	1587, 1628
BspMI	ACCTGC	1 cut(s)	844
BspPI	GGATC	2 cut(s)	752, 1640
BspT107I	GGYRCC	1 cut(s)	1585
BspTI	CTTAAG	1 cut(s)	1580
BsrDI	GCAATG	3 cut(s)	720, 780, 813
BsrFI	RCCGGY	1 cut(s)	778
BsrGI	TGTACA	1 cut(s)	1661
BsrI	ACTGG	2 cut(s)	1063, 1216
BssAI	RCCGGY	1 cut(s)	778
BssECI	CCNNGG	1 cut(s)	189
BssMI	GATC	7 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1645
Bst2UI	CCWGG	3 cut(s)	148, 408, 1395
Bst4CI	ACNGT	6 cut(s)	142, 248, 433, 1481, 1550, 1696
Bst6I	CTCTTC	2 cut(s)	1515, 1694
BstAFI	CTTAAG	1 cut(s)	1580
BstAPI	GCANNNNNTGC	1 cut(s)	1409
BstAUI	TGTACA	1 cut(s)	1661
BstC8I	GCNNGC	4 cut(s)	553, 1414, 1441, 1560
BstDEI	CTNAG	6 cut(s)	63, 224, 384, 732, 1105, 1637
BstENI	CCTNNNNNAGG	1 cut(s)	1145
BstF5I	GGATG	5 cut(s)	282, 514, 1189, 1519, 1602
BstFNI	CGCG	1 cut(s)	571
BstHHI	GCGC	2 cut(s)	80, 571
BstKTI	GATC	7 cut(s)	747, 886, 1042, 1087, 1116, 1426, 1648
BstMAI	GTCTC	2 cut(s)	1441, 1686
BstMBI	GATC	7 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1645
BstMWI	GCNNNNNNNGC	5 cut(s)	33, 397, 803, 1409, 1808
BstNI	CCWGG	3 cut(s)	148, 408, 1395
BstNSI	RCATGY	1 cut(s)	1323
BstSCI	CCNGG	6 cut(s)	146, 257, 290, 406, 462, 1393
BstSFI	CTRYAG	2 cut(s)	1563, 1650
BstUI	CGCG	1 cut(s)	571
BstV1I	GCAGC	1 cut(s)	1503
BstV2I	GAAGAC	1 cut(s)	1153
BstX2I	RGATCY	1 cut(s)	1645
BstYI	RGATCY	1 cut(s)	1645
BsuI	GTATCC	1 cut(s)	1272
BsuRI	GGCC	8 cut(s)	290, 462, 555, 825, 982, 1443, 1736, 1766
BtsCI	GGATG	5 cut(s)	282, 514, 1189, 1519, 1602
BtsIMutI	CAGTG	4 cut(s)	740, 1209, 1555, 1692
BveI	ACCTGC	1 cut(s)	844
Cac8I	GCNNGC	4 cut(s)	553, 1414, 1441, 1560
CaiI	CAGNNNCTG	1 cut(s)	1400
CciI	TCATGA	2 cut(s)	1351, 1741
CfoI	GCGC	2 cut(s)	80, 571
Cfr10I	RCCGGY	1 cut(s)	778
Cfr13I	GGNCC	3 cut(s)	289, 981, 1528
Csp6I	GTAC	6 cut(s)	42, 727, 1047, 1477, 1662, 1779
CviQI	GTAC	6 cut(s)	42, 727, 1047, 1477, 1662, 1779
DdeI	CTNAG	6 cut(s)	63, 224, 384, 732, 1105, 1637
DpnI	GATC	7 cut(s)	746, 885, 1041, 1086, 1115, 1425, 1647
DpnII	GATC	7 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1645
DraI	TTTAAA	1 cut(s)	1785
DraIII	CACNNNGTG	1 cut(s)	735
EaeI	YGGCCR	2 cut(s)	460, 823
Eam1104I	CTCTTC	2 cut(s)	1515, 1694
EarI	CTCTTC	2 cut(s)	1515, 1694
Eco147I	AGGCCT	1 cut(s)	1736
Eco32I	GATATC	2 cut(s)	255, 627
Eco47I	GGWCC	1 cut(s)	1528
Eco57I	CTGAAG	3 cut(s)	585, 741, 1709
Eco88I	CYCGRG	1 cut(s)	188
EcoNI	CCTNNNNNAGG	1 cut(s)	1145
EcoRI	GAATTC	1 cut(s)	1198
EcoRII	CCWGG	3 cut(s)	146, 406, 1393
EcoRV	GATATC	2 cut(s)	255, 627
FaqI	GGGAC	1 cut(s)	459
FauI	CCCGC	1 cut(s)	157
FauNDI	CATATG	1 cut(s)	1824
FbaI	TGATCA	3 cut(s)	883, 1039, 1113
FblI	GTMKAC	1 cut(s)	1792
Fnu4HI	GCNGC	2 cut(s)	556, 1492
FokI	GGATG	5 cut(s)	289, 521, 1196, 1526, 1609
Fsp4HI	GCNGC	2 cut(s)	556, 1492
FspBI	CTAG	3 cut(s)	72, 663, 1451
GlaI	GCGC	2 cut(s)	79, 570
GluI	GCNGC	2 cut(s)	556, 1492
GsaI	CCCAGC	1 cut(s)	1476
HaeIII	GGCC	8 cut(s)	290, 462, 555, 825, 982, 1443, 1736, 1766
HapII	CCGG	6 cut(s)	258, 292, 314, 463, 500, 779
HhaI	GCGC	2 cut(s)	80, 571
Hin6I	GCGC	2 cut(s)	78, 569
HinP1I	GCGC	2 cut(s)	78, 569
HindIII	AAGCTT	3 cut(s)	668, 1024, 1242
HinfI	GANTC	6 cut(s)	305, 386, 451, 1054, 1575, 1618
HpaII	CCGG	6 cut(s)	258, 292, 314, 463, 500, 779
HphI	GGTGA	5 cut(s)	445, 1081, 1187, 1288, 1621
Hpy166II	GTNNAC	7 cut(s)	336, 429, 729, 740, 954, 1049, 1793
Hpy8I	GTNNAC	7 cut(s)	336, 429, 729, 740, 954, 1049, 1793
HpyAV	CCTTC	6 cut(s)	499, 965, 1002, 1141, 1330, 1519
HpyCH4III	ACNGT	6 cut(s)	142, 248, 433, 1481, 1550, 1696
HpyF10VI	GCNNNNNNNGC	5 cut(s)	33, 397, 803, 1409, 1808
HpyF3I	CTNAG	6 cut(s)	63, 224, 384, 732, 1105, 1637
HspAI	GCGC	2 cut(s)	78, 569
Ksp22I	TGATCA	3 cut(s)	883, 1039, 1113
Kzo9I	GATC	7 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1645
Lsp1109I	GCAGC	1 cut(s)	1503
LweI	GCATC	6 cut(s)	65, 393, 486, 579, 672, 1587
MaeI	CTAG	3 cut(s)	72, 663, 1451
MaeIII	GTNAC	3 cut(s)	607, 800, 1294
MalI	GATC	7 cut(s)	746, 885, 1041, 1086, 1115, 1425, 1647
MboI	GATC	7 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1645
MboII	GAAGA	8 cut(s)	703, 854, 1153, 1529, 1532, 1613, 1627, 1681
MflI	RGATCY	1 cut(s)	1645
MhlI	GDGCHC	1 cut(s)	1271
MlsI	TGGCCA	1 cut(s)	825
MluNI	TGGCCA	1 cut(s)	825
MlyI	GAGTC	2 cut(s)	395, 1569
Mox20I	TGGCCA	1 cut(s)	825
MscI	TGGCCA	1 cut(s)	825
MseI	TTAA	9 cut(s)	783, 945, 959, 1128, 1463, 1581, 1707, 1784, 1829
MslI	CAYNNNNRTG	1 cut(s)	1607
Msp20I	TGGCCA	1 cut(s)	825
MspCI	CTTAAG	1 cut(s)	1580
MspI	CCGG	6 cut(s)	258, 292, 314, 463, 500, 779
MspR9I	CCNGG	6 cut(s)	148, 259, 292, 408, 464, 1395
Mva1269I	GAATGC	2 cut(s)	106, 222
MvaI	CCWGG	3 cut(s)	148, 408, 1395
MvnI	CGCG	1 cut(s)	571
MwoI	GCNNNNNNNGC	5 cut(s)	33, 397, 803, 1409, 1808
NciI	CCSGG	3 cut(s)	259, 292, 464
NdeI	CATATG	1 cut(s)	1824
NdeII	GATC	7 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1645
NlaIV	GGNNCC	2 cut(s)	1587, 1628
NmeAIII	GCCGAG	1 cut(s)	61
NmuCI	GTSAC	1 cut(s)	1294
NspI	RCATGY	1 cut(s)	1323
PagI	TCATGA	2 cut(s)	1351, 1741
PceI	AGGCCT	1 cut(s)	1736
PctI	GAATGC	2 cut(s)	106, 222
PfeI	GAWTC	4 cut(s)	305, 451, 1054, 1618
PflMI	CCANNNNNTGG	2 cut(s)	652, 1537
PfoI	TCCNGGA	1 cut(s)	146
PkrI	GCNGC	2 cut(s)	557, 1493
PleI	GAGTC	2 cut(s)	394, 1569
PpsI	GAGTC	2 cut(s)	394, 1569
PshBI	ATTAAT	1 cut(s)	1707
Psp6I	CCWGG	3 cut(s)	146, 406, 1393
PspFI	CCCAGC	1 cut(s)	1472
PspGI	CCWGG	3 cut(s)	146, 406, 1393
PspN4I	GGNNCC	2 cut(s)	1587, 1628
PspPI	GGNCC	3 cut(s)	289, 981, 1528
PstNI	CAGNNNCTG	1 cut(s)	1400
PsuI	RGATCY	1 cut(s)	1645
RsaI	GTAC	6 cut(s)	43, 728, 1048, 1478, 1663, 1780
RsaNI	GTAC	6 cut(s)	42, 727, 1047, 1477, 1662, 1779
RseI	CAYNNNNRTG	1 cut(s)	1607
SaqAI	TTAA	9 cut(s)	783, 945, 959, 1128, 1463, 1581, 1707, 1784, 1829
SatI	GCNGC	2 cut(s)	556, 1492
Sau3AI	GATC	7 cut(s)	744, 883, 1039, 1084, 1113, 1423, 1645
Sau96I	GGNCC	3 cut(s)	289, 981, 1528
ScaI	AGTACT	2 cut(s)	43, 1780
SchI	GAGTC	2 cut(s)	395, 1569
ScrFI	CCNGG	6 cut(s)	148, 259, 292, 408, 464, 1395
SduI	GDGCHC	1 cut(s)	1271
SfaNI	GCATC	6 cut(s)	65, 393, 486, 579, 672, 1587
SfcI	CTRYAG	2 cut(s)	1563, 1650
SinI	GGWCC	1 cut(s)	1528
SmiMI	CAYNNNNRTG	1 cut(s)	1607
SmlI	CTYRAG	1 cut(s)	1580
SmoI	CTYRAG	1 cut(s)	1580
SseBI	AGGCCT	1 cut(s)	1736
SsiI	CCGC	2 cut(s)	164, 556
SspMI	CTAG	3 cut(s)	72, 663, 1451
StuI	AGGCCT	1 cut(s)	1736
StyD4I	CCNGG	6 cut(s)	146, 257, 290, 406, 462, 1393
TaaI	ACNGT	6 cut(s)	142, 248, 433, 1481, 1550, 1696
TaqI	TCGA	7 cut(s)	10, 96, 117, 582, 1164, 1389, 1435
TatI	WGTACW	3 cut(s)	41, 1661, 1778
TauI	GCSGC	1 cut(s)	558
TfiI	GAWTC	4 cut(s)	305, 451, 1054, 1618
Tru1I	TTAA	9 cut(s)	783, 945, 959, 1128, 1463, 1581, 1707, 1784, 1829
Tru9I	TTAA	9 cut(s)	783, 945, 959, 1128, 1463, 1581, 1707, 1784, 1829
TscAI	CASTG	4 cut(s)	740, 1216, 1555, 1699
TseFI	GTSAC	1 cut(s)	1294
TseI	GCWGC	1 cut(s)	1491
Tsp45I	GTSAC	1 cut(s)	1294
TspDTI	ATGAA	8 cut(s)	135, 693, 930, 1046, 1385, 1530, 1628, 1811
TspGWI	ACGGA	2 cut(s)	757, 934
TspRI	CASTG	4 cut(s)	740, 1216, 1555, 1699
Van91I	CCANNNNNTGG	2 cut(s)	652, 1537
Vha464I	CTTAAG	1 cut(s)	1580
VpaK11BI	GGWCC	1 cut(s)	1528
VspI	ATTAAT	1 cut(s)	1707
XagI	CCTNNNNNAGG	1 cut(s)	1145
XapI	RAATTY	4 cut(s)	372, 1198, 1672, 1754
XbaI	TCTAGA	1 cut(s)	71
XceI	RCATGY	1 cut(s)	1323
XmiI	GTMKAC	1 cut(s)	1792
XspI	CTAG	3 cut(s)	72, 663, 1451
ZrmI	AGTACT	2 cut(s)	43, 1780

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.