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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom07g07420 |
| rosa_chinensis | RchiOBHm_Chr3g0485381 |
| rosa_multiflora | Rmu_sc0000455.1_g000014 Rmu_sc0003863.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00046570 Rroxscaffold_2G00094580 Rroxscaffold_7G00158850 Rroxscaffold_7G00198560 |
| rosa_rugosa | Rorug02G0195600 Rorug06G0009900 Rorug07G0338500 |
| rosa_samantha | Rh6BG316300 Rh6BG316600 |
| rosa_wichuraiana | Rw5G040660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 44 |
| AciI | CCGC | 2 cut(s) | 96, 121 |
| AcsI | RAATTY | 2 cut(s) | 196, 262 |
| AgsI | TTSAA | 3 cut(s) | 138, 146, 244 |
| AluBI | AGCT | 2 cut(s) | 187, 247 |
| AluI | AGCT | 2 cut(s) | 187, 247 |
| Alw21I | GWGCWC | 1 cut(s) | 42 |
| Alw44I | GTGCAC | 1 cut(s) | 38 |
| ApaLI | GTGCAC | 1 cut(s) | 38 |
| ApeKI | GCWGC | 2 cut(s) | 64, 67 |
| ApoI | RAATTY | 2 cut(s) | 196, 262 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 161, 193 |
| AsuII | TTCGAA | 1 cut(s) | 260 |
| BaeGI | GKGCMC | 1 cut(s) | 42 |
| Bbv12I | GWGCWC | 1 cut(s) | 42 |
| BbvI | GCAGC | 2 cut(s) | 51, 54 |
| BccI | CCATC | 1 cut(s) | 107 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 49, 83 |
| BclI | TGATCA | 1 cut(s) | 3 |
| BfaI | CTAG | 1 cut(s) | 268 |
| BisI | GCNGC | 3 cut(s) | 65, 68, 96 |
| BlsI | GCNGC | 3 cut(s) | 66, 69, 97 |
| BmsI | GCATC | 1 cut(s) | 51 |
| Bpu14I | TTCGAA | 1 cut(s) | 260 |
| BpuEI | CTTGAG | 2 cut(s) | 144, 173 |
| BseSI | GKGCMC | 1 cut(s) | 42 |
| BseXI | GCAGC | 2 cut(s) | 51, 54 |
| BseYI | CCCAGC | 2 cut(s) | 18, 247 |
| Bsh1236I | CGCG | 1 cut(s) | 44 |
| BsiHKAI | GWGCWC | 1 cut(s) | 42 |
| Bsp119I | TTCGAA | 1 cut(s) | 260 |
| Bsp1286I | GDGCHC | 1 cut(s) | 42 |
| Bsp143I | GATC | 1 cut(s) | 3 |
| BspACI | CCGC | 2 cut(s) | 96, 121 |
| BspFNI | CGCG | 1 cut(s) | 44 |
| BspT104I | TTCGAA | 1 cut(s) | 260 |
| BssMI | GATC | 1 cut(s) | 3 |
| BstBI | TTCGAA | 1 cut(s) | 260 |
| BstC8I | GCNNGC | 1 cut(s) | 42 |
| BstFNI | CGCG | 1 cut(s) | 44 |
| BstKTI | GATC | 1 cut(s) | 6 |
| BstMBI | GATC | 1 cut(s) | 3 |
| BstSLI | GKGCMC | 1 cut(s) | 42 |
| BstUI | CGCG | 1 cut(s) | 44 |
| BstV1I | GCAGC | 2 cut(s) | 51, 54 |
| Cac8I | GCNNGC | 1 cut(s) | 42 |
| CviJI | RGCY | 4 cut(s) | 17, 95, 187, 247 |
| CviKI_1 | RGCY | 4 cut(s) | 17, 95, 187, 247 |
| DpnI | GATC | 1 cut(s) | 5 |
| DpnII | GATC | 1 cut(s) | 3 |
| EcoRI | GAATTC | 1 cut(s) | 196 |
| FbaI | TGATCA | 1 cut(s) | 3 |
| Fnu4HI | GCNGC | 3 cut(s) | 65, 68, 96 |
| Fsp4HI | GCNGC | 3 cut(s) | 65, 68, 96 |
| FspBI | CTAG | 1 cut(s) | 268 |
| GluI | GCNGC | 3 cut(s) | 65, 68, 96 |
| GsaI | CCCAGC | 2 cut(s) | 22, 251 |
| HinfI | GANTC | 3 cut(s) | 27, 128, 237 |
| Hpy166II | GTNNAC | 1 cut(s) | 40 |
| Hpy188I | TCNGA | 1 cut(s) | 236 |
| Hpy8I | GTNNAC | 1 cut(s) | 40 |
| Hpy99I | CGWCG | 1 cut(s) | 87 |
| HpyAV | CCTTC | 1 cut(s) | 89 |
| HpyCH4V | TGCA | 1 cut(s) | 40 |
| Ksp22I | TGATCA | 1 cut(s) | 3 |
| Kzo9I | GATC | 1 cut(s) | 3 |
| LmnI | GCTCC | 1 cut(s) | 75 |
| LpnPI | CCDG | 6 cut(s) | 32, 44, 48, 105, 186, 233 |
| Lsp1109I | GCAGC | 2 cut(s) | 51, 54 |
| LweI | GCATC | 1 cut(s) | 51 |
| MaeI | CTAG | 1 cut(s) | 268 |
| MalI | GATC | 1 cut(s) | 5 |
| MboI | GATC | 1 cut(s) | 3 |
| MboII | GAAGA | 3 cut(s) | 126, 134, 232 |
| MhlI | GDGCHC | 1 cut(s) | 42 |
| MluCI | AATT | 3 cut(s) | 138, 196, 262 |
| MlyI | GAGTC | 1 cut(s) | 21 |
| MnlI | CCTC | 4 cut(s) | 59, 122, 162, 190 |
| MvnI | CGCG | 1 cut(s) | 44 |
| NdeII | GATC | 1 cut(s) | 3 |
| NspV | TTCGAA | 1 cut(s) | 260 |
| PfeI | GAWTC | 2 cut(s) | 128, 237 |
| PkrI | GCNGC | 3 cut(s) | 66, 69, 97 |
| PleI | GAGTC | 1 cut(s) | 21 |
| PpsI | GAGTC | 1 cut(s) | 21 |
| PspFI | CCCAGC | 2 cut(s) | 18, 247 |
| SatI | GCNGC | 3 cut(s) | 65, 68, 96 |
| Sau3AI | GATC | 1 cut(s) | 3 |
| SchI | GAGTC | 1 cut(s) | 21 |
| SduI | GDGCHC | 1 cut(s) | 42 |
| SetI | ASST | 4 cut(s) | 81, 114, 189, 249 |
| SfaNI | GCATC | 1 cut(s) | 51 |
| SfuI | TTCGAA | 1 cut(s) | 260 |
| SmlI | CTYRAG | 2 cut(s) | 159, 188 |
| SmoI | CTYRAG | 2 cut(s) | 159, 188 |
| Sse9I | AATT | 3 cut(s) | 138, 196, 262 |
| SsiI | CCGC | 2 cut(s) | 96, 121 |
| SspMI | CTAG | 1 cut(s) | 268 |
| TaqI | TCGA | 6 cut(s) | 85, 154, 207, 215, 254, 260 |
| TasI | AATT | 3 cut(s) | 138, 196, 262 |
| TauI | GCSGC | 1 cut(s) | 98 |
| TfiI | GAWTC | 2 cut(s) | 128, 237 |
| TseI | GCWGC | 2 cut(s) | 64, 67 |
| TspDTI | ATGAA | 1 cut(s) | 120 |
| VneI | GTGCAC | 1 cut(s) | 38 |
| XapI | RAATTY | 2 cut(s) | 196, 262 |
| XspI | CTAG | 1 cut(s) | 268 |