Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0016960

Physical Location & Seq

Genomic Coordinates Reverse (-)

37245836 .. 37250548

Gene Structure 4713 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0338500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

ATGTTGGCCGCTGCGCCGCCCAGGACCTACCGCACCCCCACCACTCTCCCTTCCTCCTCCGCTCGCAAATTAGCCTCGCCCTCCTCCGCCGCTACAGCCACCAACAACACCCGCGCCCTAATCGTCAAATGCTGCGCCGTCTCTCCCTCCTCCTCGCCCCTTTCTCAAAACCCTAAACCCTCTCCGAATCTCCTCCAAAAAGTCGCCAAAACCGTCGCCGGCGTCACCACCGTCACCCTCGTCTTGAACTTGAGCAATTTCCCCGCCTTCCTCGGAGGCGGCGGCGGCAATTCCGCCGGCGGAGGCGGAGGAGGAGGAGGAGATGGTTCGGGCGGCGGCGGCGGAGGAGGTTTTTGGAGGAGGCTGTTCGGGCCGCAGCTGGTGGCGAATGCCGACGAGCCACAGTCTCAGGAGTGGGACTCTCACGGATTGCCGGCCAACATTGTGGTCCAGCTCAACAAGCTCAGTGGCTTCAAGAAATACAAGGTCTCCGAGATCTTGTTCTTCGATCGGAGGCGGTGGAGCACCGTCGGGACCGAGGACTCCTTCTTTGAAATGGTCTCCCTTAGACCCGGCGGAGTCTACACCAAGGCGCAGCTCCAGAAAGAGCTCGAAACCCTGGCCAATTGCGGAATGTTCGAGAAGGTCGATTTGGAAGGGAAGACCAACCCCGACGGCACCCTCGGTGTCACCATTTCCTTCACTGAGAGCACGTGGCAGTCGGCGGACAAGTTCCGGTGTATCAACGTGGGCCTGATGGCGCAGTCCAAGCCCATCGAAATGGACCCGGACATGACTGATAAGGAGAAGATGGAGTATTTCAGGAACCAGGAGAAGGATTACAAGAGGAGGATTGAGAGGGCCAGGCCGTGCTTGTTGCCGGCTCCGGTGCAGAGGGAGGTGTTGCTCATGTTGAGAGAGCAAGGGAAGGTGAGTGCTAGGCTGTTGCAGAAGATTCGGGACCGGGTTCAGAAATGGTACCAAGATGAGGGGTACGCGTGTGCTCAAGTTGTCAATTTCGGGAATTTGAACACCAAAGAGGTTGTGTGTGAAGTGGTGGAAGGTGATATCACACAGCTGGTTATTCAGTTCCAGGATAAGCTTGGCAATTTTGTGGAAGGGAACACTCAGATTCCTGTGGTGAAGAGAGAATTGCCCAAACAGCTCCGACCAGGTTATGTCTTTAATATAGAAGCAGGGAAACAAGCTCTGAGGAACATAAACTCCCTGGCATTGTTTTCAAACATTGAAGTGAATCCACGACCGGATGAGAAGAATGAAGGAGGGATAATTGTTGAAATAAAGCTTAAAGAACTAGAACAAAAGACCGCCGAAGTCAGCACGGAATGGAGCATTGTTCCTGGACGTGGTGGTTATCCCACTTTGGCTTCACTGCAGCCTGGTGGGACAGTTACATTTGAACATCGAAATCTCAATGGGTTGAATAGGTCTATTCTCGGTTCAGTAACCACCAGCAACTTCTACAACCCTCAGGATGATCTTGCTTTTAAGCTTGAGTATGTGCATCCATATCTGGATGGTGTGTACAATCCCCGCAATCGCTCTCTCCGCGTAAGCTGCTTCAACAGTCGAAAATTGAGTCCAGTCTTTACTGGTGGGCCAGGGGCTGATGAAGTCCCCCCTATATGGGTTGACCGAGCGGGCATGAAGGCTAATATAACAGAGAATTTCAACCGTCAGAGCAAATTCACTTATGGACTTGTAATGGAAGAGATAACAACACGTGATGAACGCAGCCATATCTGTTCAAATGGCCAAAGAGTGTTGCCCAGTGGTGGAGTCAGTGAAGATGGACCTCCAACAACTCTGAGTGGTACGGGCATTGATCGTGTGGCATTTTTACAGTCAAATATCACACGTGATAACACCAAGTTCGTGAATGGAACTATAGTTGGTGAGAGGAATGTGTTTCAGGTTGACCAAGGCCTTGGCGTCGGCAGCAAGTTTCCATTCTTCAACCGCCACCAGCTAACGTTAACAAGATTTTTCCAGCTGAAGGAAGTGGAGGAAGGTGCCGGCAAACCACCACCACCTGTCCTTGTACTTCATGGTCACTATGGTGGCTGTGTTGGAGACCTTCCAAGTTATGATGCATTTACTCTTGGAGGTCCATATTCGGTGAGAGGTTACAACATGGGTGAAATAGGCGCTGCCAGGCAAATCCTTGAGCTTGCAGCTGAGCTACGGATACCAGTAAAGGGGACACATGTATATGCCTTTGCAGAGCATGGCAATGATCTCGGAAGTTCGAAGGATGTCAAGGGTAACCCGACAGAGGTATACAGGCGAGTGGGTCATGGGTCATCATATGGTGTTGGTGTCAAGTTAGGTCTAGTAAGAGCAGAATATGCTGTGGATCACAACTCAGGCTCAGGTTCAGTATTCTTCCGATTTGGTGAGAGATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006900 GO:0006996 GO:0008150 GO:0009987 GO:0010876 GO:0012505 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031984 GO:0033036 GO:0034204 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045332 GO:0048193 GO:0048194 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase Hydrolase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

809

Amino Acids

88.35

Weight (kDa)

8.89

Isoelectric Point (pI)

45.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POTRA1_3_Toc75	PF25282	145 - 236	8.4e-41	Toc75-like, POTRA domain
POTRA2_Toc75	PF25280	245 - 356	3.5e-59	Toc75-like, second POTRA domain
POTRA1_3_Toc75	PF25282	357 - 438	6.9e-31	Toc75-like, POTRA domain
Omp85	PF01103	477 - 806	5.7e-20	Omp85 superfamily domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016960)

Species	Orthologous Gene IDs
pyrus_communis	pycom07g07420
rosa_chinensis	RchiOBHm_Chr3g0485381
rosa_multiflora	Rmu_sc0000455.1_g000014 Rmu_sc0003863.1_g000006
rosa_roxburghii	Rroxscaffold_1G00046570 Rroxscaffold_2G00094580 Rroxscaffold_7G00158850 Rroxscaffold_7G00198560
rosa_rugosa	Rorug02G0195600 Rorug06G0009900 Rorug07G0338500
rosa_samantha	Rh6BG316300 Rh6BG316600
rosa_wichuraiana	Rw5G040660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	978
AccB1I	GGYRCC	3 cut(s)	677, 978, 2033
AccBSI	CCGCTC	2 cut(s)	62, 1661
AccI	GTMKAC	2 cut(s)	582, 2301
AccII	CGCG	3 cut(s)	114, 998, 1572
AclI	AACGTT	1 cut(s)	1994
AclWI	GGATC	1 cut(s)	2385
AcoI	YGGCCR	4 cut(s)	6, 435, 621, 1774
AcsI	RAATTY	3 cut(s)	1024, 1687, 1706
AcuI	CTGAAG	1 cut(s)	2036
AcvI	CACGTG	3 cut(s)	714, 1745, 1880
AcyI	GRCGYC	2 cut(s)	222, 1953
AfaI	GTAC	5 cut(s)	980, 995, 1547, 1837, 2064
AfiI	CCNNNNNNNGG	9 cut(s)	835, 988, 1367, 1647, 1648, 1796, 2017, 2219, 2296
AflIII	ACRYGT	4 cut(s)	996, 1742, 1877, 2227
AjiI	CACGTC	1 cut(s)	1367
AjuI	GAANNNNNNNTTGG	2 cut(s)	635, 667
AleI	CACNNNNGTG	1 cut(s)	2079
AloI	GAACNNNNNNTCC	2 cut(s)	1208, 1240
Alw21I	GWGCWC	4 cut(s)	527, 612, 713, 1006
Alw26I	GTCTC	5 cut(s)	145, 411, 493, 565, 2088
AlwI	GGATC	1 cut(s)	2385
AlwNI	CAGNNNCTG	1 cut(s)	1628
ApoI	RAATTY	3 cut(s)	1024, 1687, 1706
ArsI	GACNNNNNNTTYG	4 cut(s)	533, 565, 1585, 1617
Asp718I	GGTACC	1 cut(s)	978
AspLEI	GCGC	6 cut(s)	16, 116, 137, 595, 763, 2171
AsuC2I	CCSGG	3 cut(s)	573, 788, 965
AsuII	TTCGAA	1 cut(s)	2270
AvaII	GGWCC	7 cut(s)	24, 448, 534, 784, 961, 1814, 2129
AxyI	CCTNAGG	1 cut(s)	1491
BaeI	ACNNNNGTAYC	2 cut(s)	985, 1018
BalI	TGGCCA	2 cut(s)	623, 1776
BanI	GGYRCC	3 cut(s)	677, 978, 2033
BanII	GRGCYC	1 cut(s)	612
BbrPI	CACGTG	3 cut(s)	714, 1745, 1880
BbsI	GAAGAC	1 cut(s)	668
Bbv12I	GWGCWC	4 cut(s)	527, 612, 713, 1006
BbvI	GCAGC	9 cut(s)	119, 388, 607, 1408, 1565, 1767, 1971, 2158, 2207
BccI	CCATC	6 cut(s)	317, 751, 782, 805, 1532, 1805
BceAI	ACGGC	3 cut(s)	122, 691, 853
BcgI	CGANNNNNNTGC	4 cut(s)	938, 972, 2242, 2276
BciVI	GTATCC	1 cut(s)	2202
BcnI	CCSGG	3 cut(s)	573, 788, 965
BcoDI	GTCTC	5 cut(s)	145, 411, 493, 565, 2088
BfaI	CTAG	3 cut(s)	939, 1316, 2354
BfmI	CTRYAG	3 cut(s)	93, 1394, 1908
BfoI	RGCGCY	1 cut(s)	2172
BfuI	GTATCC	1 cut(s)	2202
BglII	AGATCT	1 cut(s)	495
BlpI	GCTNAGC	1 cut(s)	2199
Bme18I	GGWCC	7 cut(s)	24, 448, 534, 784, 961, 1814, 2129
BmgBI	CACGTC	1 cut(s)	1367
BmiI	GGNNCC	8 cut(s)	535, 679, 786, 827, 885, 962, 980, 2035
BmrI	ACTGGG	1 cut(s)	1785
BmsI	GCATC	2 cut(s)	1534, 2101
BmuI	ACTGGG	1 cut(s)	1785
BpiI	GAAGAC	1 cut(s)	668
BplI	GAGNNNNNCTC	2 cut(s)	404, 436
BpmI	CTGGAG	1 cut(s)	584
Bpu10I	CCTNAGC	1 cut(s)	2392
Bpu1102I	GCTNAGC	1 cut(s)	2199
Bpu14I	TTCGAA	1 cut(s)	2270
BpuEI	CTTGAG	4 cut(s)	271, 990, 1535, 2207
BpuMI	CCSGG	3 cut(s)	573, 788, 965
BsaAI	YACGTR	3 cut(s)	714, 1745, 1880
BsaHI	GRCGYC	2 cut(s)	222, 1953
BsaI	GGTCTC	3 cut(s)	493, 565, 2088
BsaWI	WCCGGW	3 cut(s)	735, 886, 1264
BsaXI	ACNNNNNCTCC	4 cut(s)	473, 503, 1208, 1238
Bsc4I	CCNNNNNNNGG	9 cut(s)	835, 988, 1367, 1647, 1648, 1796, 2017, 2219, 2296
Bse118I	RCCGGY	5 cut(s)	218, 296, 433, 880, 2036
Bse1I	ACTGG	4 cut(s)	1604, 1618, 1791, 2213
Bse21I	CCTNAGG	1 cut(s)	1491
Bse3DI	GCAATG	1 cut(s)	2260
BseGI	GGATG	5 cut(s)	1273, 1501, 1525, 1543, 2281
BseLI	CCNNNNNNNGG	9 cut(s)	835, 988, 1367, 1647, 1648, 1796, 2017, 2219, 2296
BseMI	GCAATG	1 cut(s)	2260
BseNI	ACTGG	4 cut(s)	1604, 1618, 1791, 2213
BseXI	GCAGC	9 cut(s)	119, 388, 607, 1408, 1565, 1767, 1971, 2158, 2207
BsgI	GTGCAG	1 cut(s)	911
Bsh1236I	CGCG	3 cut(s)	114, 998, 1572
Bsh1285I	CGRYCG	2 cut(s)	511, 1265
BshNI	GGYRCC	3 cut(s)	677, 978, 2033
BsiEI	CGRYCG	2 cut(s)	511, 1265
BsiHKAI	GWGCWC	4 cut(s)	527, 612, 713, 1006
BslFI	GGGAC	6 cut(s)	431, 547, 974, 1420, 1622, 2236
BslI	CCNNNNNNNGG	9 cut(s)	835, 988, 1367, 1647, 1648, 1796, 2017, 2219, 2296
BsmAI	GTCTC	5 cut(s)	145, 411, 493, 565, 2088
BsmBI	CGTCTC	1 cut(s)	145
BsmFI	GGGAC	6 cut(s)	431, 547, 974, 1420, 1622, 2236
BsmI	GAATGC	1 cut(s)	394
Bso31I	GGTCTC	3 cut(s)	493, 565, 2088
Bsp119I	TTCGAA	1 cut(s)	2270
Bsp1286I	GDGCHC	4 cut(s)	527, 612, 713, 1006
Bsp1407I	TGTACA	1 cut(s)	1545
Bsp143I	GATC	6 cut(s)	495, 508, 1498, 1846, 2257, 2377
Bsp1720I	GCTNAGC	1 cut(s)	2199
BspFNI	CGCG	3 cut(s)	114, 998, 1572
BspLI	GGNNCC	8 cut(s)	535, 679, 786, 827, 885, 962, 980, 2035
BspMAI	CTGCAG	1 cut(s)	1398
BspPI	GGATC	1 cut(s)	2385
BspT104I	TTCGAA	1 cut(s)	2270
BspT107I	GGYRCC	3 cut(s)	677, 978, 2033
BspTNI	GGTCTC	3 cut(s)	493, 565, 2088
BsrBI	CCGCTC	2 cut(s)	62, 1661
BsrDI	GCAATG	1 cut(s)	2260
BsrFI	RCCGGY	5 cut(s)	218, 296, 433, 880, 2036
BsrGI	TGTACA	1 cut(s)	1545
BsrI	ACTGG	4 cut(s)	1604, 1618, 1791, 2213
BssAI	RCCGGY	5 cut(s)	218, 296, 433, 880, 2036
BssMI	GATC	6 cut(s)	495, 508, 1498, 1846, 2257, 2377
BssNAI	GTATAC	1 cut(s)	2302
BssNI	GRCGYC	2 cut(s)	222, 1953
BssT1I	CCWWGG	3 cut(s)	588, 1942, 1948
Bst1107I	GTATAC	1 cut(s)	2302
Bst4CI	ACNGT	8 cut(s)	214, 232, 405, 529, 1411, 1589, 1697, 1866
Bst6I	CTCTTC	2 cut(s)	1139, 1725
BstACI	GRCGYC	2 cut(s)	222, 1953
BstAPI	GCANNNNNTGC	1 cut(s)	2369
BstAUI	TGTACA	1 cut(s)	1545
BstBAI	YACGTR	3 cut(s)	714, 1745, 1880
BstBI	TTCGAA	1 cut(s)	2270
BstC8I	GCNNGC	8 cut(s)	64, 220, 298, 435, 882, 1663, 2038, 2193
BstEII	GGTNACC	1 cut(s)	2285
BstF5I	GGATG	5 cut(s)	1273, 1501, 1525, 1543, 2281
BstFNI	CGCG	3 cut(s)	114, 998, 1572
BstH2I	RGCGCY	1 cut(s)	2172
BstHHI	GCGC	6 cut(s)	16, 116, 137, 595, 763, 2171
BstKTI	GATC	6 cut(s)	498, 511, 1501, 1849, 2260, 2380
BstMAI	GTCTC	5 cut(s)	145, 411, 493, 565, 2088
BstMBI	GATC	6 cut(s)	495, 508, 1498, 1846, 2257, 2377
BstMCI	CGRYCG	2 cut(s)	511, 1265
BstNSI	RCATGY	1 cut(s)	2231
BstPI	GGTNACC	1 cut(s)	2285
BstSFI	CTRYAG	3 cut(s)	93, 1394, 1908
BstUI	CGCG	3 cut(s)	114, 998, 1572
BstV1I	GCAGC	9 cut(s)	119, 388, 607, 1408, 1565, 1767, 1971, 2158, 2207
BstV2I	GAAGAC	1 cut(s)	668
BstX2I	RGATCY	1 cut(s)	495
BstXI	CCANNNNNNTGG	3 cut(s)	445, 781, 1949
BstYI	RGATCY	1 cut(s)	495
BstZ17I	GTATAC	1 cut(s)	2302
Bsu36I	CCTNAGG	1 cut(s)	1491
BsuI	GTATCC	1 cut(s)	2202
BtrI	CACGTC	1 cut(s)	1367
BtsCI	GGATG	5 cut(s)	1273, 1501, 1525, 1543, 2281
BtsI	GCAGTG	1 cut(s)	1391
BtsIMutI	CAGTG	5 cut(s)	472, 702, 1391, 1798, 1810
Cac8I	GCNNGC	8 cut(s)	64, 220, 298, 435, 882, 1663, 2038, 2193
CaiI	CAGNNNCTG	1 cut(s)	1628
CfoI	GCGC	6 cut(s)	16, 116, 137, 595, 763, 2171
Cfr10I	RCCGGY	5 cut(s)	218, 296, 433, 880, 2036
CseI	GACGC	2 cut(s)	211, 1942
CsiI	ACCWGGT	1 cut(s)	1171
Csp6I	GTAC	5 cut(s)	979, 994, 1546, 1836, 2063
CspCI	CAANNNNNGTGG	2 cut(s)	448, 483
CviAII	CATG	8 cut(s)	793, 910, 1666, 2069, 2155, 2228, 2249, 2318
CviQI	GTAC	5 cut(s)	979, 994, 1546, 1836, 2063
DpnI	GATC	6 cut(s)	497, 510, 1500, 1848, 2259, 2379
DpnII	GATC	6 cut(s)	495, 508, 1498, 1846, 2257, 2377
EaeI	YGGCCR	4 cut(s)	6, 435, 621, 1774
Eam1104I	CTCTTC	2 cut(s)	1139, 1725
EarI	CTCTTC	2 cut(s)	1139, 1725
EciI	GGCGGA	7 cut(s)	76, 283, 315, 321, 357, 591, 740
Ecl136II	GAGCTC	1 cut(s)	610
Eco130I	CCWWGG	3 cut(s)	588, 1942, 1948
Eco147I	AGGCCT	1 cut(s)	1947
Eco24I	GRGCYC	1 cut(s)	612
Eco31I	GGTCTC	3 cut(s)	493, 565, 2088
Eco32I	GATATC	1 cut(s)	1069
Eco47I	GGWCC	7 cut(s)	24, 448, 534, 784, 961, 1814, 2129
Eco53kI	GAGCTC	1 cut(s)	610
Eco57I	CTGAAG	1 cut(s)	2036
Eco72I	CACGTG	3 cut(s)	714, 1745, 1880
Eco81I	CCTNAGG	1 cut(s)	1491
Eco91I	GGTNACC	1 cut(s)	2285
EcoICRI	GAGCTC	1 cut(s)	610
EcoO109I	RGGNCCY	1 cut(s)	24
EcoO65I	GGTNACC	1 cut(s)	2285
EcoRV	GATATC	1 cut(s)	1069
EcoT14I	CCWWGG	3 cut(s)	588, 1942, 1948
EcoT22I	ATGCAT	1 cut(s)	2116
EcoT38I	GRGCYC	1 cut(s)	612
ErhI	CCWWGG	3 cut(s)	588, 1942, 1948
Esp3I	CGTCTC	1 cut(s)	145
FaeI	CATG	8 cut(s)	796, 913, 1669, 2072, 2158, 2231, 2252, 2321
FaqI	GGGAC	6 cut(s)	431, 547, 974, 1420, 1622, 2236
FatI	CATG	8 cut(s)	792, 909, 1665, 2068, 2154, 2227, 2248, 2317
FauI	CCCGC	4 cut(s)	119, 271, 1562, 1654
FauNDI	CATATG	1 cut(s)	2329
FblI	GTMKAC	2 cut(s)	582, 2301
FokI	GGATG	5 cut(s)	1280, 1508, 1512, 1550, 2288
FriOI	GRGCYC	1 cut(s)	612
FspBI	CTAG	3 cut(s)	939, 1316, 2354
GlaI	GCGC	6 cut(s)	15, 115, 136, 594, 762, 2170
GsuI	CTGGAG	1 cut(s)	584
HaeII	RGCGCY	1 cut(s)	2172
HgaI	GACGC	2 cut(s)	211, 1942
HhaI	GCGC	6 cut(s)	16, 116, 137, 595, 763, 2171
Hin1I	GRCGYC	2 cut(s)	222, 1953
Hin1II	CATG	8 cut(s)	796, 913, 1669, 2072, 2158, 2231, 2252, 2321
Hin6I	GCGC	6 cut(s)	14, 114, 135, 593, 761, 2169
HinP1I	GCGC	6 cut(s)	14, 114, 135, 593, 761, 2169
HincII	GTYRAC	3 cut(s)	1654, 1939, 1998
HindII	GTYRAC	3 cut(s)	1654, 1939, 1998
HindIII	AAGCTT	3 cut(s)	1100, 1304, 1511
HinfI	GANTC	9 cut(s)	187, 419, 542, 579, 955, 1132, 1255, 1600, 1800
HpaI	GTTAAC	1 cut(s)	1998
Hpy166II	GTNNAC	6 cut(s)	583, 1546, 1654, 1939, 1998, 2302
Hpy8I	GTNNAC	6 cut(s)	583, 1546, 1654, 1939, 1998, 2302
Hpy99I	CGWCG	5 cut(s)	218, 398, 533, 677, 1958
HpyCH4III	ACNGT	8 cut(s)	214, 232, 405, 529, 1411, 1589, 1697, 1866
HpyCH4IV	ACGT	6 cut(s)	713, 747, 1366, 1744, 1879, 1994
HpyCH4V	TGCA	7 cut(s)	892, 949, 1396, 1525, 2114, 2195, 2243
HpySE526I	ACGT	6 cut(s)	713, 747, 1366, 1744, 1879, 1994
Hsp92I	GRCGYC	2 cut(s)	222, 1953
Hsp92II	CATG	8 cut(s)	796, 913, 1669, 2072, 2158, 2231, 2252, 2321
HspAI	GCGC	6 cut(s)	14, 114, 135, 593, 761, 2169
KpnI	GGTACC	1 cut(s)	982
KroI	GCCGGC	5 cut(s)	218, 296, 433, 880, 2036
KroNI	GCCGGC	5 cut(s)	220, 298, 435, 882, 2038
KspAI	GTTAAC	1 cut(s)	1998
Kzo9I	GATC	6 cut(s)	495, 508, 1498, 1846, 2257, 2377
LmnI	GCTCC	5 cut(s)	522, 603, 889, 1170, 1350
Lsp1109I	GCAGC	9 cut(s)	119, 388, 607, 1408, 1565, 1767, 1971, 2158, 2207
LweI	GCATC	2 cut(s)	1534, 2101
MabI	ACCWGGT	1 cut(s)	1171
MaeI	CTAG	3 cut(s)	939, 1316, 2354
MaeII	ACGT	6 cut(s)	713, 747, 1366, 1744, 1879, 1994
MaeIII	GTNAC	8 cut(s)	223, 232, 688, 1411, 1465, 2072, 2147, 2285
MalI	GATC	6 cut(s)	497, 510, 1500, 1848, 2259, 2379
MbiI	CCGCTC	2 cut(s)	62, 1661
MboI	GATC	6 cut(s)	495, 508, 1498, 1846, 2257, 2377
MfeI	CAATTG	1 cut(s)	625
MflI	RGATCY	1 cut(s)	495
MhlI	GDGCHC	4 cut(s)	527, 612, 713, 1006
MlsI	TGGCCA	2 cut(s)	623, 1776
MluI	ACGCGT	1 cut(s)	996
MluNI	TGGCCA	2 cut(s)	623, 1776
MlyI	GAGTC	5 cut(s)	413, 536, 588, 1609, 1809
MmeI	TCCRAC	3 cut(s)	1192, 1844, 2071
Mox20I	TGGCCA	2 cut(s)	623, 1776
Mph1103I	ATGCAT	1 cut(s)	2116
MreI	CGCCGGCG	2 cut(s)	218, 296
MroNI	GCCGGC	5 cut(s)	218, 296, 433, 880, 2036
MscI	TGGCCA	2 cut(s)	623, 1776
MseI	TTAA	4 cut(s)	1185, 1308, 1509, 1997
MslI	CAYNNNNRTG	5 cut(s)	779, 1250, 2079, 2232, 2253
Msp20I	TGGCCA	2 cut(s)	623, 1776
MspA1I	CMGCKG	5 cut(s)	11, 379, 1078, 2014, 2198
MunI	CAATTG	1 cut(s)	625
Mva1269I	GAATGC	1 cut(s)	394
MvnI	CGCG	3 cut(s)	114, 998, 1572
NaeI	GCCGGC	5 cut(s)	220, 298, 435, 882, 2038
NciI	CCSGG	3 cut(s)	573, 788, 965
NdeI	CATATG	1 cut(s)	2329
NdeII	GATC	6 cut(s)	495, 508, 1498, 1846, 2257, 2377
NgoMIV	GCCGGC	5 cut(s)	218, 296, 433, 880, 2036
NlaIII	CATG	8 cut(s)	796, 913, 1669, 2072, 2158, 2231, 2252, 2321
NlaIV	GGNNCC	8 cut(s)	535, 679, 786, 827, 885, 962, 980, 2035
NmuCI	GTSAC	4 cut(s)	223, 232, 688, 2072
NsiI	ATGCAT	1 cut(s)	2116
NspI	RCATGY	1 cut(s)	2231
NspV	TTCGAA	1 cut(s)	2270
OliI	CACNNNNGTG	1 cut(s)	2079
PceI	AGGCCT	1 cut(s)	1947
PciI	ACATGT	1 cut(s)	2227
PcsI	WCGNNNNNNNCGW	2 cut(s)	210, 645
PctI	GAATGC	1 cut(s)	394
PdiI	GCCGGC	5 cut(s)	220, 298, 435, 882, 2038
PfeI	GAWTC	4 cut(s)	187, 955, 1132, 1255
PfoI	TCCNGGA	2 cut(s)	1092, 1360
Ple19I	CGATCG	1 cut(s)	511
PleI	GAGTC	5 cut(s)	413, 536, 587, 1608, 1808
PmaCI	CACGTG	3 cut(s)	714, 1745, 1880
PmlI	CACGTG	3 cut(s)	714, 1745, 1880
PpsI	GAGTC	5 cut(s)	413, 536, 587, 1608, 1808
Ppu21I	YACGTR	3 cut(s)	714, 1745, 1880
PpuMI	RGGWCCY	1 cut(s)	24
PscI	ACATGT	1 cut(s)	2227
Psp124BI	GAGCTC	1 cut(s)	612
Psp1406I	AACGTT	1 cut(s)	1994
Psp5II	RGGWCCY	1 cut(s)	24
PspCI	CACGTG	3 cut(s)	714, 1745, 1880
PspEI	GGTNACC	1 cut(s)	2285
PspN4I	GGNNCC	8 cut(s)	535, 679, 786, 827, 885, 962, 980, 2035
PspPPI	RGGWCCY	1 cut(s)	24
PstI	CTGCAG	1 cut(s)	1398
PstNI	CAGNNNCTG	1 cut(s)	1628
PsuI	RGATCY	1 cut(s)	495
PvuI	CGATCG	1 cut(s)	511
PvuII	CAGCTG	4 cut(s)	379, 1078, 2014, 2198
RsaI	GTAC	5 cut(s)	980, 995, 1547, 1837, 2064
RsaNI	GTAC	5 cut(s)	979, 994, 1546, 1836, 2063
RseI	CAYNNNNRTG	5 cut(s)	779, 1250, 2079, 2232, 2253
SacI	GAGCTC	1 cut(s)	612
SaqAI	TTAA	4 cut(s)	1185, 1308, 1509, 1997
Sau3AI	GATC	6 cut(s)	495, 508, 1498, 1846, 2257, 2377
SchI	GAGTC	5 cut(s)	413, 536, 588, 1609, 1809
SduI	GDGCHC	4 cut(s)	527, 612, 713, 1006
SexAI	ACCWGGT	1 cut(s)	1171
SfaNI	GCATC	2 cut(s)	1534, 2101
SfcI	CTRYAG	3 cut(s)	93, 1394, 1908
SfuI	TTCGAA	1 cut(s)	2270
SgrAI	CRCCGGYG	2 cut(s)	218, 296
SinI	GGWCC	7 cut(s)	24, 448, 534, 784, 961, 1814, 2129
SmiMI	CAYNNNNRTG	5 cut(s)	779, 1250, 2079, 2232, 2253
SmlI	CTYRAG	4 cut(s)	250, 1005, 1514, 2186
SmoI	CTYRAG	4 cut(s)	250, 1005, 1514, 2186
SseBI	AGGCCT	1 cut(s)	1947
SspMI	CTAG	3 cut(s)	939, 1316, 2354
SstI	GAGCTC	1 cut(s)	612
StuI	AGGCCT	1 cut(s)	1947
StyI	CCWWGG	3 cut(s)	588, 1942, 1948
TaaI	ACNGT	8 cut(s)	214, 232, 405, 529, 1411, 1589, 1697, 1866
TaiI	ACGT	6 cut(s)	716, 750, 1369, 1747, 1882, 1997
TaqI	TCGA	8 cut(s)	507, 612, 639, 648, 777, 1426, 1591, 2270
TaqII	GACCGA	2 cut(s)	551, 1671
TatI	WGTACW	2 cut(s)	1545, 2062
TfiI	GAWTC	4 cut(s)	187, 955, 1132, 1255
Tru1I	TTAA	4 cut(s)	1185, 1308, 1509, 1997
Tru9I	TTAA	4 cut(s)	1185, 1308, 1509, 1997
TscAI	CASTG	5 cut(s)	472, 709, 1398, 1798, 1810
TseFI	GTSAC	4 cut(s)	223, 232, 688, 2072
Tsp45I	GTSAC	4 cut(s)	223, 232, 688, 2072
TspDTI	ATGAA	5 cut(s)	1293, 1647, 1682, 1764, 2057
TspGWI	ACGGA	3 cut(s)	441, 1358, 2221
TspRI	CASTG	5 cut(s)	472, 709, 1398, 1798, 1810
VpaK11BI	GGWCC	7 cut(s)	24, 448, 534, 784, 961, 1814, 2129
XapI	RAATTY	3 cut(s)	1024, 1687, 1706
XceI	RCATGY	1 cut(s)	2231
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1100
XmiI	GTMKAC	2 cut(s)	582, 2301
XspI	CTAG	3 cut(s)	939, 1316, 2354
Zsp2I	ATGCAT	1 cut(s)	2116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.