Rh6BG316600

Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
54686724 .. 54693730
7007 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG316600.1

Sequence Viewer

Length: 213 bp
ATGGTTTTCCTTTTGTGCTTGGAGGAACAGGAGGATCGAGGACTAAGTTTGATCTTTGAGGGAGAAGAAGGAAAAAAGGAAAGTGTTCTCCATCAAATAAGTGAGGCAAAGGCATTGCTTGCTTCACCATATGAGAACTTCGAAGCATTGGCTTTTATCAGTGATGAGAATTCACTCGCTTATTCCTTAAAGGGACCTGCACTTTGGTATTGA

Protein Analysis

70

Amino Acids

7.88

Weight (kDa)

4.34

Isoelectric Point (pI)

37.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 205
AclWI GGATC 1 cut(s) 42
AcsI RAATTY 1 cut(s) 169
AlwI GGATC 1 cut(s) 42
ApoI RAATTY 1 cut(s) 169
ArsI GACNNNNNNTTYG 1 cut(s) 186
Asp700I GAANNNNTTC 1 cut(s) 84
AspS9I GGNCC 1 cut(s) 194
AsuHPI GGTGA 1 cut(s) 117
AsuII TTCGAA 1 cut(s) 141
AvaII GGWCC 1 cut(s) 194
BccI CCATC 1 cut(s) 99
BfuAI ACCTGC 1 cut(s) 205
Bme18I GGWCC 1 cut(s) 194
BmgT120I GGNCC 1 cut(s) 194
BmiI GGNNCC 1 cut(s) 195
Bpu14I TTCGAA 1 cut(s) 141
Bse3DI GCAATG 1 cut(s) 113
BseMI GCAATG 1 cut(s) 113
BsgI GTGCAG 1 cut(s) 183
BslFI GGGAC 1 cut(s) 207
BsmFI GGGAC 1 cut(s) 207
Bsp119I TTCGAA 1 cut(s) 141
Bsp143I GATC 2 cut(s) 34, 51
BspLI GGNNCC 1 cut(s) 195
BspMI ACCTGC 1 cut(s) 205
BspPI GGATC 1 cut(s) 42
BspT104I TTCGAA 1 cut(s) 141
BsrDI GCAATG 1 cut(s) 113
BssMI GATC 2 cut(s) 34, 51
BstAPI GCANNNNNTGC 1 cut(s) 119
BstBI TTCGAA 1 cut(s) 141
BstC8I GCNNGC 1 cut(s) 120
BstDEI CTNAG 1 cut(s) 44
BstKTI GATC 2 cut(s) 37, 54
BstMBI GATC 2 cut(s) 34, 51
BstMWI GCNNNNNNNGC 1 cut(s) 119
BtsIMutI CAGTG 1 cut(s) 166
BveI ACCTGC 1 cut(s) 205
Cac8I GCNNGC 1 cut(s) 120
Cfr13I GGNCC 1 cut(s) 194
CviJI RGCY 1 cut(s) 152
CviKI_1 RGCY 1 cut(s) 152
DdeI CTNAG 1 cut(s) 44
DpnI GATC 2 cut(s) 36, 53
DpnII GATC 2 cut(s) 34, 51
Eco47I GGWCC 1 cut(s) 194
EcoO109I RGGNCCY 1 cut(s) 194
EcoRI GAATTC 1 cut(s) 169
FaiI YATR 2 cut(s) 130, 132
FaqI GGGAC 1 cut(s) 207
FauNDI CATATG 1 cut(s) 130
HphI GGTGA 1 cut(s) 117
HpyAV CCTTC 1 cut(s) 62
HpyCH4V TGCA 1 cut(s) 200
HpyF10VI GCNNNNNNNGC 1 cut(s) 119
HpyF3I CTNAG 1 cut(s) 44
Kzo9I GATC 2 cut(s) 34, 51
LpnPI CCDG 1 cut(s) 14
MalI GATC 2 cut(s) 36, 53
MboI GATC 2 cut(s) 34, 51
MboII GAAGA 1 cut(s) 77
MluCI AATT 1 cut(s) 169
MnlI CCTC 5 cut(s) 16, 25, 32, 52, 97
MroXI GAANNNNTTC 1 cut(s) 84
MseI TTAA 1 cut(s) 188
MwoI GCNNNNNNNGC 1 cut(s) 119
NdeI CATATG 1 cut(s) 130
NdeII GATC 2 cut(s) 34, 51
NlaIV GGNNCC 1 cut(s) 195
NspV TTCGAA 1 cut(s) 141
PdmI GAANNNNTTC 1 cut(s) 84
PpuMI RGGWCCY 1 cut(s) 194
Psp5II RGGWCCY 1 cut(s) 194
PspN4I GGNNCC 1 cut(s) 195
PspPI GGNCC 1 cut(s) 194
PspPPI RGGWCCY 1 cut(s) 194
SaqAI TTAA 1 cut(s) 188
Sau3AI GATC 2 cut(s) 34, 51
Sau96I GGNCC 1 cut(s) 194
SetI ASST 1 cut(s) 199
SfuI TTCGAA 1 cut(s) 141
SgeI CNNG 6 cut(s) 31, 41, 50, 131, 188, 209
SinI GGWCC 1 cut(s) 194
Sse9I AATT 1 cut(s) 169
TaqI TCGA 2 cut(s) 37, 141
TasI AATT 1 cut(s) 169
Tru1I TTAA 1 cut(s) 188
Tru9I TTAA 1 cut(s) 188
TscAI CASTG 1 cut(s) 166
TspRI CASTG 1 cut(s) 166
VpaK11BI GGWCC 1 cut(s) 194
XapI RAATTY 1 cut(s) 169
XmnI GAANNNNTTC 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.