RchiOBHm_Chr3g0486081

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
33009613 .. 33010769
1157 bp
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UTR
Exon/CDS
Intron
PRQ45061

Sequence Viewer

Length: 153 bp
ATGGTCTTTGCCTCTTTGGGATCTCGAAGTGAGAATGAGATTGAGAATTGGGTGAGCGCAGAAAGAGATGGACAAGCACGTGACATCTGTGGGAATTATCTTAATAGAAAAACGCCCTCAAGAAATTACTGTGACGGAGTTAGTTTTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

50

Amino Acids

5.71

Weight (kDa)

5.1

Isoelectric Point (pI)

54.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018587)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 28
AcvI CACGTG 1 cut(s) 80
AlwI GGATC 1 cut(s) 28
AspLEI GCGC 1 cut(s) 59
AsuHPI GGTGA 1 cut(s) 64
BbrPI CACGTG 1 cut(s) 80
BccI CCATC 1 cut(s) 62
BpuEI CTTGAG 1 cut(s) 103
BsaAI YACGTR 1 cut(s) 80
Bsp143I GATC 1 cut(s) 20
BspPI GGATC 1 cut(s) 28
BssMI GATC 1 cut(s) 20
Bst4CI ACNGT 1 cut(s) 131
BstBAI YACGTR 1 cut(s) 80
BstHHI GCGC 1 cut(s) 59
BstKTI GATC 1 cut(s) 23
BstMBI GATC 1 cut(s) 20
BstX2I RGATCY 1 cut(s) 20
BstYI RGATCY 1 cut(s) 20
CfoI GCGC 1 cut(s) 59
DpnI GATC 1 cut(s) 22
DpnII GATC 1 cut(s) 20
Eco72I CACGTG 1 cut(s) 80
GlaI GCGC 1 cut(s) 58
HhaI GCGC 1 cut(s) 59
Hin6I GCGC 1 cut(s) 57
HinP1I GCGC 1 cut(s) 57
HphI GGTGA 1 cut(s) 64
Hpy188III TCNNGA 2 cut(s) 24, 120
HpyCH4III ACNGT 1 cut(s) 131
HpyCH4IV ACGT 1 cut(s) 79
HpySE526I ACGT 1 cut(s) 79
HspAI GCGC 1 cut(s) 57
Kzo9I GATC 1 cut(s) 20
MaeII ACGT 1 cut(s) 79
MaeIII GTNAC 2 cut(s) 80, 131
MalI GATC 1 cut(s) 22
MboI GATC 1 cut(s) 20
MflI RGATCY 1 cut(s) 20
MluCI AATT 3 cut(s) 46, 94, 124
MnlI CCTC 2 cut(s) 22, 127
MseI TTAA 1 cut(s) 102
NdeII GATC 1 cut(s) 20
NmuCI GTSAC 2 cut(s) 80, 131
PmaCI CACGTG 1 cut(s) 80
PmlI CACGTG 1 cut(s) 80
Ppu21I YACGTR 1 cut(s) 80
PspCI CACGTG 1 cut(s) 80
PsuI RGATCY 1 cut(s) 20
SaqAI TTAA 1 cut(s) 102
Sau3AI GATC 1 cut(s) 20
SetI ASST 1 cut(s) 82
SgeI CNNG 5 cut(s) 36, 86, 90, 92, 132
SmlI CTYRAG 1 cut(s) 118
SmoI CTYRAG 1 cut(s) 118
Sse9I AATT 3 cut(s) 46, 94, 124
TaaI ACNGT 1 cut(s) 131
TaiI ACGT 1 cut(s) 82
TaqI TCGA 1 cut(s) 25
TasI AATT 3 cut(s) 46, 94, 124
Tru1I TTAA 1 cut(s) 102
Tru9I TTAA 1 cut(s) 102
TseFI GTSAC 2 cut(s) 80, 131
Tsp45I GTSAC 2 cut(s) 80, 131
TspGWI ACGGA 1 cut(s) 150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.