OTU-like cysteine protease
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0486081 |
| rosa_laevigata | RLG00000015407 RLG00000015416 |
| rosa_multiflora | Rmu_sc0002522.1_g000045 |
| rosa_samantha | Rh6AG017500 Rh6AG018300 Rh6AG018600 Rh6AG019200 |
| rosa_wichuraiana | Rw6G000100 Rw6G002130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 268 |
| AciI | CCGC | 2 cut(s) | 169, 173 |
| AclWI | GGATC | 1 cut(s) | 28 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 254 |
| AgsI | TTSAA | 1 cut(s) | 336 |
| Alw26I | GTCTC | 1 cut(s) | 147 |
| AlwI | GGATC | 1 cut(s) | 28 |
| ApeKI | GCWGC | 1 cut(s) | 176 |
| AspS9I | GGNCC | 1 cut(s) | 257 |
| AvaII | GGWCC | 1 cut(s) | 257 |
| BanI | GGYRCC | 1 cut(s) | 268 |
| BbvI | GCAGC | 1 cut(s) | 163 |
| BccI | CCATC | 2 cut(s) | 221, 258 |
| BciVI | GTATCC | 1 cut(s) | 111 |
| BcoDI | GTCTC | 1 cut(s) | 147 |
| BfaI | CTAG | 1 cut(s) | 263 |
| BfmI | CTRYAG | 1 cut(s) | 73 |
| BfuI | GTATCC | 1 cut(s) | 111 |
| BisI | GCNGC | 2 cut(s) | 174, 177 |
| BlsI | GCNGC | 2 cut(s) | 175, 178 |
| Bme18I | GGWCC | 1 cut(s) | 257 |
| BmgT120I | GGNCC | 1 cut(s) | 257 |
| BmiI | GGNNCC | 1 cut(s) | 270 |
| BmsI | GCATC | 3 cut(s) | 103, 172, 334 |
| BpuEI | CTTGAG | 2 cut(s) | 38, 322 |
| BsaAI | YACGTR | 1 cut(s) | 205 |
| BsaBI | GATNNNNATC | 1 cut(s) | 99 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 333, 363 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 254 |
| Bse3DI | GCAATG | 1 cut(s) | 164 |
| Bse8I | GATNNNNATC | 1 cut(s) | 99 |
| BseJI | GATNNNNATC | 1 cut(s) | 99 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 254 |
| BseMI | GCAATG | 1 cut(s) | 164 |
| BseXI | GCAGC | 1 cut(s) | 163 |
| BshNI | GGYRCC | 1 cut(s) | 268 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 254 |
| BsmAI | GTCTC | 1 cut(s) | 147 |
| BsmI | GAATGC | 1 cut(s) | 328 |
| Bsp143I | GATC | 1 cut(s) | 20 |
| BspACI | CCGC | 2 cut(s) | 169, 173 |
| BspLI | GGNNCC | 1 cut(s) | 270 |
| BspPI | GGATC | 1 cut(s) | 28 |
| BspT107I | GGYRCC | 1 cut(s) | 268 |
| BsrDI | GCAATG | 1 cut(s) | 164 |
| BssMI | GATC | 1 cut(s) | 20 |
| Bst4CI | ACNGT | 1 cut(s) | 77 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 353 |
| BstBAI | YACGTR | 1 cut(s) | 205 |
| BstC8I | GCNNGC | 1 cut(s) | 171 |
| BstKTI | GATC | 1 cut(s) | 23 |
| BstMAI | GTCTC | 1 cut(s) | 147 |
| BstMBI | GATC | 1 cut(s) | 20 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 182, 191, 353 |
| BstSFI | CTRYAG | 1 cut(s) | 73 |
| BstSNI | TACGTA | 1 cut(s) | 205 |
| BstV1I | GCAGC | 1 cut(s) | 163 |
| BstX2I | RGATCY | 1 cut(s) | 20 |
| BstYI | RGATCY | 1 cut(s) | 20 |
| BsuI | GTATCC | 1 cut(s) | 111 |
| BtsIMutI | CAGTG | 1 cut(s) | 82 |
| Cac8I | GCNNGC | 1 cut(s) | 171 |
| Cfr13I | GGNCC | 1 cut(s) | 257 |
| CviJI | RGCY | 3 cut(s) | 52, 176, 300 |
| CviKI_1 | RGCY | 3 cut(s) | 52, 176, 300 |
| DpnI | GATC | 1 cut(s) | 22 |
| DpnII | GATC | 1 cut(s) | 20 |
| Eco105I | TACGTA | 1 cut(s) | 205 |
| Eco32I | GATATC | 1 cut(s) | 367 |
| Eco47I | GGWCC | 1 cut(s) | 257 |
| EcoRV | GATATC | 1 cut(s) | 367 |
| FaiI | YATR | 5 cut(s) | 120, 122, 202, 380, 382 |
| FauI | CCCGC | 1 cut(s) | 162 |
| FauNDI | CATATG | 1 cut(s) | 380 |
| Fnu4HI | GCNGC | 2 cut(s) | 174, 177 |
| Fsp4HI | GCNGC | 2 cut(s) | 174, 177 |
| FspBI | CTAG | 1 cut(s) | 263 |
| GluI | GCNGC | 2 cut(s) | 174, 177 |
| HinfI | GANTC | 1 cut(s) | 316 |
| Hpy166II | GTNNAC | 1 cut(s) | 260 |
| Hpy188I | TCNGA | 2 cut(s) | 321, 364 |
| Hpy188III | TCNNGA | 1 cut(s) | 55 |
| Hpy8I | GTNNAC | 1 cut(s) | 260 |
| HpyCH4III | ACNGT | 1 cut(s) | 77 |
| HpyCH4IV | ACGT | 1 cut(s) | 204 |
| HpyCH4V | TGCA | 2 cut(s) | 162, 347 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 182, 191, 353 |
| HpySE526I | ACGT | 1 cut(s) | 204 |
| Kzo9I | GATC | 1 cut(s) | 20 |
| LpnPI | CCDG | 1 cut(s) | 237 |
| Lsp1109I | GCAGC | 1 cut(s) | 163 |
| LweI | GCATC | 3 cut(s) | 103, 172, 334 |
| MaeI | CTAG | 1 cut(s) | 263 |
| MaeII | ACGT | 1 cut(s) | 204 |
| MalI | GATC | 1 cut(s) | 22 |
| MboI | GATC | 1 cut(s) | 20 |
| MboII | GAAGA | 1 cut(s) | 77 |
| MfeI | CAATTG | 2 cut(s) | 157, 213 |
| MflI | RGATCY | 1 cut(s) | 20 |
| MluCI | AATT | 5 cut(s) | 46, 157, 213, 234, 277 |
| MnlI | CCTC | 5 cut(s) | 22, 255, 259, 282, 297 |
| MunI | CAATTG | 2 cut(s) | 157, 213 |
| Mva1269I | GAATGC | 1 cut(s) | 328 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 182, 191, 353 |
| NdeI | CATATG | 1 cut(s) | 380 |
| NdeII | GATC | 1 cut(s) | 20 |
| NlaIV | GGNNCC | 1 cut(s) | 270 |
| PctI | GAATGC | 1 cut(s) | 328 |
| PfeI | GAWTC | 1 cut(s) | 316 |
| PkrI | GCNGC | 2 cut(s) | 175, 178 |
| Ppu21I | YACGTR | 1 cut(s) | 205 |
| PspN4I | GGNNCC | 1 cut(s) | 270 |
| PspPI | GGNCC | 1 cut(s) | 257 |
| PsuI | RGATCY | 1 cut(s) | 20 |
| SatI | GCNGC | 2 cut(s) | 174, 177 |
| Sau3AI | GATC | 1 cut(s) | 20 |
| Sau96I | GGNCC | 1 cut(s) | 257 |
| SetI | ASST | 3 cut(s) | 207, 259, 270 |
| SfaNI | GCATC | 3 cut(s) | 103, 172, 334 |
| SfcI | CTRYAG | 1 cut(s) | 73 |
| SgeI | CNNG | 8 cut(s) | 67, 182, 236, 266, 275, 308, 313, 369 |
| SinI | GGWCC | 1 cut(s) | 257 |
| SmlI | CTYRAG | 2 cut(s) | 53, 301 |
| SmoI | CTYRAG | 2 cut(s) | 53, 301 |
| SnaBI | TACGTA | 1 cut(s) | 205 |
| Sse9I | AATT | 5 cut(s) | 46, 157, 213, 234, 277 |
| SsiI | CCGC | 2 cut(s) | 169, 173 |
| SspMI | CTAG | 1 cut(s) | 263 |
| TaaI | ACNGT | 1 cut(s) | 77 |
| TaiI | ACGT | 1 cut(s) | 207 |
| TasI | AATT | 5 cut(s) | 46, 157, 213, 234, 277 |
| TauI | GCSGC | 1 cut(s) | 176 |
| TfiI | GAWTC | 1 cut(s) | 316 |
| TscAI | CASTG | 1 cut(s) | 82 |
| TseI | GCWGC | 1 cut(s) | 176 |
| TspRI | CASTG | 1 cut(s) | 82 |
| VpaK11BI | GGWCC | 1 cut(s) | 257 |
| XspI | CTAG | 1 cut(s) | 263 |