RchiOBHm_Chr4g0403451

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
22656292 .. 22660770
4479 bp
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UTR
Exon/CDS
Intron
PRQ37518

Sequence Viewer

Length: 246 bp
ATGGCAATATACCAAATTCACATTCCCTCTAATCATATTCACTACATCAAACCTAATATTCGTTTTAGTCGGCAGAAAGGAAAAAAACCTGTGTTCCTCTCTAATCATACGAACACCCATTGTCCATCCATCACTGATATTGTCATCTTTTCCATAGTCTTCTTCCGCTGCTCTTTAGTGGTTATGTTATTGCCAAGCCTCCGAGTTACTGCCGCTTTGAGTACGCAAAGTTCTCGTAAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

81

Amino Acids

9.31

Weight (kDa)

11.04

Isoelectric Point (pI)

58.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 166, 213
AcsI RAATTY 1 cut(s) 15
AfaI GTAC 1 cut(s) 223
AjuI GAANNNNNNNTTGG 1 cut(s) 38
ApeKI GCWGC 1 cut(s) 168
ApoI RAATTY 1 cut(s) 15
BbsI GAAGAC 1 cut(s) 151
BbvI GCAGC 1 cut(s) 155
BccI CCATC 2 cut(s) 133, 137
BcgI CGANNNNNNTGC 1 cut(s) 215
BisI GCNGC 2 cut(s) 169, 213
BlsI GCNGC 2 cut(s) 170, 214
BpiI GAAGAC 1 cut(s) 151
BseGI GGATG 1 cut(s) 125
BseXI GCAGC 1 cut(s) 155
BspACI CCGC 2 cut(s) 166, 213
BstF5I GGATG 1 cut(s) 125
BstV1I GCAGC 1 cut(s) 155
BstV2I GAAGAC 1 cut(s) 151
BtsCI GGATG 1 cut(s) 125
BtsIMutI CAGTG 1 cut(s) 132
Csp6I GTAC 1 cut(s) 222
CviJI RGCY 1 cut(s) 198
CviKI_1 RGCY 1 cut(s) 198
CviQI GTAC 1 cut(s) 222
FaiI YATR 5 cut(s) 10, 36, 108, 155, 185
Fnu4HI GCNGC 2 cut(s) 169, 213
FokI GGATG 1 cut(s) 112
Fsp4HI GCNGC 2 cut(s) 169, 213
GluI GCNGC 2 cut(s) 169, 213
Hpy188I TCNGA 1 cut(s) 203
LpnPI CCDG 1 cut(s) 102
Lsp1109I GCAGC 1 cut(s) 155
MaeIII GTNAC 1 cut(s) 205
MboII GAAGA 2 cut(s) 151, 154
MluCI AATT 1 cut(s) 15
MnlI CCTC 3 cut(s) 37, 107, 209
MspA1I CMGCKG 1 cut(s) 168
PkrI GCNGC 2 cut(s) 170, 214
PsrI GAACNNNNNNTAC 2 cut(s) 214, 246
RsaI GTAC 1 cut(s) 223
RsaNI GTAC 1 cut(s) 222
SatI GCNGC 2 cut(s) 169, 213
SetI ASST 2 cut(s) 55, 91
SgeI CNNG 3 cut(s) 101, 207, 215
Sse9I AATT 1 cut(s) 15
SsiI CCGC 2 cut(s) 166, 213
SspI AATATT 1 cut(s) 58
TasI AATT 1 cut(s) 15
TauI GCSGC 1 cut(s) 215
TscAI CASTG 1 cut(s) 139
TseI GCWGC 1 cut(s) 168
TspRI CASTG 1 cut(s) 139
XapI RAATTY 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.