Polysaccharide biosynthesis protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G33360 AT4G33360 |
| fragaria_vesca | FvH4_2g34590 |
| malus_domestica | MD08G1103100.v1.1 |
| prunus_persica | Prupe.1G438100_v2.0.a1 |
| pyrus_communis | pycom08g08450 |
| rosa_chinensis | RchiOBHm_Chr4g0409851 RchiOBHm_Chr5g0013111 RchiOBHm_Chr6g0307561 RchiOBHm_Chr6g0307711 |
| rosa_laevigata | RLG00000010706 |
| rosa_multiflora | Rmu_sc0000031.1_g000026 |
| rosa_rugosa | Rorug06G0359800 |
| rosa_samantha | Rh6AG469200 Rh6BG479800 Rh6CG485400 Rh6DG472000 |
| rosa_wichuraiana | Rw6G040970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 90 |
| AgsI | TTSAA | 1 cut(s) | 13 |
| AjnI | CCWGG | 1 cut(s) | 79 |
| AluBI | AGCT | 2 cut(s) | 130, 228 |
| AluI | AGCT | 2 cut(s) | 130, 228 |
| AoxI | GGCC | 1 cut(s) | 177 |
| ApoI | RAATTY | 1 cut(s) | 90 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 8 |
| AspS9I | GGNCC | 1 cut(s) | 177 |
| BaeGI | GKGCMC | 1 cut(s) | 80 |
| BccI | CCATC | 1 cut(s) | 52 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 11, 45 |
| BciT130I | CCWGG | 1 cut(s) | 81 |
| BclI | TGATCA | 1 cut(s) | 138 |
| BfaI | CTAG | 1 cut(s) | 222 |
| Bme1390I | CCNGG | 1 cut(s) | 81 |
| BmgT120I | GGNCC | 1 cut(s) | 177 |
| BmrFI | CCNGG | 1 cut(s) | 81 |
| BmsI | GCATC | 1 cut(s) | 178 |
| BpuEI | CTTGAG | 1 cut(s) | 70 |
| BsaBI | GATNNNNATC | 1 cut(s) | 107 |
| BsaJI | CCNNGG | 1 cut(s) | 79 |
| Bse8I | GATNNNNATC | 1 cut(s) | 107 |
| BseBI | CCWGG | 1 cut(s) | 81 |
| BseDI | CCNNGG | 1 cut(s) | 79 |
| BseGI | GGATG | 2 cut(s) | 57, 102 |
| BseJI | GATNNNNATC | 1 cut(s) | 107 |
| BseSI | GKGCMC | 1 cut(s) | 80 |
| BshFI | GGCC | 1 cut(s) | 179 |
| BsmI | GAATGC | 1 cut(s) | 34 |
| BsnI | GGCC | 1 cut(s) | 179 |
| Bsp1286I | GDGCHC | 1 cut(s) | 80 |
| Bsp143I | GATC | 1 cut(s) | 138 |
| BspANI | GGCC | 1 cut(s) | 179 |
| BssECI | CCNNGG | 1 cut(s) | 79 |
| BssMI | GATC | 1 cut(s) | 138 |
| Bst2UI | CCWGG | 1 cut(s) | 81 |
| Bst4CI | ACNGT | 1 cut(s) | 154 |
| BstF5I | GGATG | 2 cut(s) | 57, 102 |
| BstKTI | GATC | 1 cut(s) | 141 |
| BstMBI | GATC | 1 cut(s) | 138 |
| BstNI | CCWGG | 1 cut(s) | 81 |
| BstSCI | CCNGG | 1 cut(s) | 79 |
| BstSLI | GKGCMC | 1 cut(s) | 80 |
| BsuRI | GGCC | 1 cut(s) | 179 |
| BtsCI | GGATG | 2 cut(s) | 57, 102 |
| Cfr13I | GGNCC | 1 cut(s) | 177 |
| CviAII | CATG | 1 cut(s) | 34 |
| CviJI | RGCY | 6 cut(s) | 42, 84, 130, 179, 197, 228 |
| CviKI_1 | RGCY | 6 cut(s) | 42, 84, 130, 179, 197, 228 |
| DpnI | GATC | 1 cut(s) | 140 |
| DpnII | GATC | 1 cut(s) | 138 |
| EcoRII | CCWGG | 1 cut(s) | 79 |
| FaeI | CATG | 1 cut(s) | 37 |
| FaiI | YATR | 4 cut(s) | 35, 159, 216, 235 |
| FatI | CATG | 1 cut(s) | 33 |
| FbaI | TGATCA | 1 cut(s) | 138 |
| FokI | GGATG | 2 cut(s) | 64, 109 |
| FspBI | CTAG | 1 cut(s) | 222 |
| HaeIII | GGCC | 1 cut(s) | 179 |
| Hin1II | CATG | 1 cut(s) | 37 |
| HindIII | AAGCTT | 2 cut(s) | 128, 226 |
| HinfI | GANTC | 2 cut(s) | 9, 103 |
| Hpy166II | GTNNAC | 1 cut(s) | 146 |
| Hpy188III | TCNNGA | 2 cut(s) | 87, 114 |
| Hpy8I | GTNNAC | 1 cut(s) | 146 |
| HpyCH4III | ACNGT | 1 cut(s) | 154 |
| Hsp92II | CATG | 1 cut(s) | 37 |
| Ksp22I | TGATCA | 1 cut(s) | 138 |
| Kzo9I | GATC | 1 cut(s) | 138 |
| LpnPI | CCDG | 4 cut(s) | 24, 66, 93, 108 |
| LweI | GCATC | 1 cut(s) | 178 |
| MaeI | CTAG | 1 cut(s) | 222 |
| MalI | GATC | 1 cut(s) | 140 |
| MboI | GATC | 1 cut(s) | 138 |
| MboII | GAAGA | 1 cut(s) | 67 |
| MhlI | GDGCHC | 1 cut(s) | 80 |
| MluCI | AATT | 3 cut(s) | 13, 90, 117 |
| MmeI | TCCRAC | 1 cut(s) | 189 |
| MnlI | CCTC | 1 cut(s) | 40 |
| MroXI | GAANNNNTTC | 1 cut(s) | 8 |
| MseI | TTAA | 1 cut(s) | 164 |
| MspR9I | CCNGG | 1 cut(s) | 81 |
| Mva1269I | GAATGC | 1 cut(s) | 34 |
| MvaI | CCWGG | 1 cut(s) | 81 |
| NdeII | GATC | 1 cut(s) | 138 |
| NlaIII | CATG | 1 cut(s) | 37 |
| PctI | GAATGC | 1 cut(s) | 34 |
| PdmI | GAANNNNTTC | 1 cut(s) | 8 |
| PfeI | GAWTC | 2 cut(s) | 9, 103 |
| Psp6I | CCWGG | 1 cut(s) | 79 |
| PspGI | CCWGG | 1 cut(s) | 79 |
| PspPI | GGNCC | 1 cut(s) | 177 |
| SaqAI | TTAA | 1 cut(s) | 164 |
| Sau3AI | GATC | 1 cut(s) | 138 |
| Sau96I | GGNCC | 1 cut(s) | 177 |
| ScrFI | CCNGG | 1 cut(s) | 81 |
| SduI | GDGCHC | 1 cut(s) | 80 |
| SetI | ASST | 2 cut(s) | 132, 230 |
| SfaNI | GCATC | 1 cut(s) | 178 |
| SgeI | CNNG | 9 cut(s) | 34, 46, 51, 92, 93, 99, 126, 135, 211 |
| SmlI | CTYRAG | 1 cut(s) | 85 |
| SmoI | CTYRAG | 1 cut(s) | 85 |
| Sse9I | AATT | 3 cut(s) | 13, 90, 117 |
| SspMI | CTAG | 1 cut(s) | 222 |
| StyD4I | CCNGG | 1 cut(s) | 79 |
| TaaI | ACNGT | 1 cut(s) | 154 |
| TaqI | TCGA | 1 cut(s) | 115 |
| TasI | AATT | 3 cut(s) | 13, 90, 117 |
| TfiI | GAWTC | 2 cut(s) | 9, 103 |
| Tru1I | TTAA | 1 cut(s) | 164 |
| Tru9I | TTAA | 1 cut(s) | 164 |
| TspDTI | ATGAA | 2 cut(s) | 17, 68 |
| XapI | RAATTY | 1 cut(s) | 90 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 205 |
| XmnI | GAANNNNTTC | 1 cut(s) | 8 |
| XspI | CTAG | 1 cut(s) | 222 |