Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0011167

Physical Location & Seq

Genomic Coordinates Reverse (-)

14599449 .. 14602324

Gene Structure 2876 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ30047

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGAGCACGACTGAGCTGCTCCGATCCAACAAAAGCAAGAAGCCCAAAGCGCTGTCCTCCGATGACCGCCACACCCTAAACCCGACCCGATTCCTCTCCATGGCCCGCAAATCCTCTCTCATCAAGCAAGCCCTCGCCACCGTCCTCTTCGTCGTCCTCCTCTACGCCACCCTCAACACCTTCCTCAGCCCCGCCGCCGTCTCCCCCGCCCTCCCTTCCTTCTCCTCCTCCTCCTCCTCCCCCCCATACGACGCCGTCATCAACGTCGTTTCCCGCGACAACGACCCCAATTCTAATTCCAACCCCAAGCCCGTCGTCAAAGTGTACCTCTACGACCTCCCGACGCGGTTCACCTACGGCATCATCGAGCAGCACTCGCTCGCCCGCGGCGGCCACCCCGCCGGAGACGTGTCGTCGCTCAAGTACCCCGGCCACCAGCACATGGGGGAGTGGTACCTCTTCAAGGACCTCCTCAAGCCCGAATCGGACCGGGTCGGGTCGCCGGTGGCGAGGGTTTTGGATCCGGACGAGGCGGACTTTTTCTACGTGCCGTTCTTCTCCTCCTTGAGCTTGATCGTCAACACGAACCGGCAGGCGGCCGGATCGGAGGAGAGGCCGGCGTACAGCGACGAGGAGAACCAGGTGGCGCTGGTGGAGTGGCTGGAGGCGCAGGAGTACTGGAAGCGGAACAATGGACGCGACCATGTGATCATGGCCTCTGATCCCAATGCTCTGTACAAAGTGCTTGATAGTGTTAAAAATGCAGTCTTGCTTGTTTGTGATTTTGGGCGGCTCAAGGCGGACCAGGGGTCGCTGGTGAAGGATGTCATTGTGCCCTATTCTCACCGGATTAATACTTATAATGGTGATATCAGTGTCGAAAATCGCAACACTTTGCTGTTCTTCATGGGCAATCGATTTCGCAAAGAGGGGGGAAAGATCCGAGATTTGCTTTTCCAATTGCTTGAAAATGAAGAGGATGTCATAGTGAAACATGGAACCCAATCCAGGGAGAGTCGACGGGCCGCTACACATGGGATGCATACGTCTAAGTTCTGTTTGAATCCTGCTGGTGATACTCCATCAGCTTGCCGGCTTTTTGACTCTATAGTTAGTTTGTGTGTCCCTGTGGTAATCAGTGATAGTATTGAGCTTCCATTTGAAGATGTTATAGACTACAGGAAGATAGCCATATTTGTTGAATCGAATACAGCTTTGAAGCCGGGATTCCTGGTCTCAATGCTAAGAGAAATTACCAGTGAGAGAATCCTTGAATATCAGAAAGAGATGAATGAGGTGAAGCATTATTTTCAATATGGAGTACCAAATGGAACTGTGAATGAGATATGGCGCCATATTGCACAGAAGCTTCCCTTTATCAAGTTGTCGATCAACCGTGACAAACGCCTTGTAAAGAGGGATATGAATGTGCCAGACTGCTCTTGTGTCTGCTCAAACCAGACTGGGATTATAACCAGCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009832 GO:0009834 GO:0009987 GO:0010383 GO:0010393 GO:0010410 GO:0010413 GO:0010417 GO:0012505 GO:0015020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016763 GO:0017144 GO:0031221 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0035884 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045488 GO:0045489 GO:0045491 GO:0045492 GO:0047517 GO:0070589 GO:0070592 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0080116 GO:0097708 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exostosin

Protein Analysis

494

Amino Acids

55.56

Weight (kDa)

7.63

Isoelectric Point (pI)

43.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exostosin_GT47	PF03016	104 - 414	1.1e-76	Exostosin GT47 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35100
fragaria_vesca	FvH4_3g12450 FvH4_3g12450
malus_domestica	MD05G1250200.v1.1 MD10G1231200.v1.1
prunus_persica	Prupe.4G113400_v2.0.a1
pyrus_communis	pycom03g23690 pycom05g22820 pycom10g19440
rosa_chinensis	RchiOBHm_Chr5g0020381
rosa_laevigata	RLG00000032518
rosa_multiflora	Rmu_sc0002087.1_g000001 Rmu_sc0007157.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057880
rosa_rugosa	Rorug05G0058900
rosa_samantha	Rh5AG149100 Rh5BG148800 Rh5CG160400 Rh5DG147500
rosa_wichuraiana	Rw5G013220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	861, 1472
Acc65I	GGTACC	1 cut(s)	453
AccB1I	GGYRCC	2 cut(s)	453, 1350
AccB7I	CCANNNNNTGG	1 cut(s)	442
AccI	GTMKAC	1 cut(s)	1018
AccII	CGCG	4 cut(s)	276, 346, 387, 699
AccIII	TCCGGA	1 cut(s)	523
AclWI	GGATC	6 cut(s)	18, 515, 528, 610, 716, 934
AcoI	YGGCCR	3 cut(s)	391, 430, 597
AcyI	GRCGYC	2 cut(s)	252, 1351
AfaI	GTAC	7 cut(s)	326, 425, 455, 623, 677, 737, 1323
AfeI	AGCGCT	1 cut(s)	51
AfiI	CCNNNNNNNGG	6 cut(s)	100, 442, 463, 595, 1008, 1009
AflIII	ACRYGT	1 cut(s)	408
AgsI	TTSAA	8 cut(s)	463, 968, 1063, 1163, 1202, 1219, 1274, 1313
AhdI	GACNNNNNGTC	2 cut(s)	412, 808
AjiI	CACGTC	1 cut(s)	409
AjnI	CCWGG	4 cut(s)	639, 804, 1007, 1230
AluBI	AGCT	6 cut(s)	16, 570, 1088, 1153, 1214, 1369
AluI	AGCT	6 cut(s)	16, 570, 1088, 1153, 1214, 1369
Alw21I	GWGCWC	1 cut(s)	8
Alw26I	GTCTC	3 cut(s)	205, 399, 1240
AlwI	GGATC	6 cut(s)	18, 515, 528, 610, 716, 934
Aor13HI	TCCGGA	1 cut(s)	523
Aor51HI	AGCGCT	1 cut(s)	51
AoxI	GGCC	7 cut(s)	102, 391, 430, 597, 614, 714, 1023
ApeKI	GCWGC	2 cut(s)	16, 370
AseI	ATTAAT	1 cut(s)	852
Asp718I	GGTACC	1 cut(s)	453
AspLEI	GCGC	4 cut(s)	52, 649, 670, 1353
AspS9I	GGNCC	5 cut(s)	103, 466, 487, 802, 1023
AsuC2I	CCSGG	3 cut(s)	429, 491, 1224
AsuHPI	GGTGA	6 cut(s)	343, 829, 836, 878, 1085, 1309
AvaII	GGWCC	3 cut(s)	466, 487, 802
BaeGI	GKGCMC	1 cut(s)	837
BamHI	GGATCC	1 cut(s)	520
BanI	GGYRCC	2 cut(s)	453, 1350
Bbv12I	GWGCWC	1 cut(s)	8
BbvCI	CCTCAGC	1 cut(s)	185
BbvI	GCAGC	2 cut(s)	3, 382
BccI	CCATC	1 cut(s)	1090
BceAI	ACGGC	4 cut(s)	182, 239, 373, 535
BcgI	CGANNNNNNTGC	1 cut(s)	32
BciT130I	CCWGG	4 cut(s)	641, 806, 1009, 1232
BclI	TGATCA	1 cut(s)	708
BcnI	CCSGG	3 cut(s)	429, 491, 1224
BcoDI	GTCTC	3 cut(s)	205, 399, 1240
BfmI	CTRYAG	2 cut(s)	1107, 1177
BfoI	RGCGCY	3 cut(s)	53, 650, 1354
BisI	GCNGC	8 cut(s)	17, 195, 371, 388, 391, 597, 791, 1026
BlsI	GCNGC	8 cut(s)	18, 196, 372, 389, 392, 598, 792, 1027
BmcAI	AGTACT	1 cut(s)	677
Bme1390I	CCNGG	7 cut(s)	429, 491, 641, 806, 1009, 1224, 1232
Bme18I	GGWCC	3 cut(s)	466, 487, 802
BmeRI	GACNNNNNGTC	2 cut(s)	412, 808
BmgBI	CACGTC	1 cut(s)	409
BmgT120I	GGNCC	5 cut(s)	103, 466, 487, 802, 1023
BmiI	GGNNCC	4 cut(s)	455, 522, 1000, 1352
BmrFI	CCNGG	7 cut(s)	429, 491, 641, 806, 1009, 1224, 1232
BmrI	ACTGGG	1 cut(s)	1473
BmsI	GCATC	2 cut(s)	369, 1029
BmuI	ACTGGG	1 cut(s)	1473
BplI	GAGNNNNNCTC	2 cut(s)	359, 391
BpmI	CTGGAG	1 cut(s)	683
Bpu10I	CCTNAGC	1 cut(s)	185
BpuEI	CTTGAG	4 cut(s)	404, 458, 586, 779
BpuMI	CCSGG	3 cut(s)	429, 491, 1224
Bsa29I	ATCGAT	1 cut(s)	916
BsaAI	YACGTR	1 cut(s)	547
BsaHI	GRCGYC	2 cut(s)	252, 1351
BsaI	GGTCTC	1 cut(s)	1240
BsaJI	CCNNGG	5 cut(s)	99, 385, 427, 805, 1008
BsaWI	WCCGGW	2 cut(s)	523, 846
Bsc4I	CCNNNNNNNGG	6 cut(s)	100, 442, 463, 595, 1008, 1009
Bse118I	RCCGGY	4 cut(s)	502, 588, 616, 1092
Bse1I	ACTGG	3 cut(s)	683, 1257, 1468
BseAI	TCCGGA	1 cut(s)	523
BseBI	CCWGG	4 cut(s)	641, 806, 1009, 1232
BseCI	ATCGAT	1 cut(s)	916
BseDI	CCNNGG	5 cut(s)	99, 385, 427, 805, 1008
BseGI	GGATG	3 cut(s)	829, 985, 1044
BseLI	CCNNNNNNNGG	6 cut(s)	100, 442, 463, 595, 1008, 1009
BseMII	CTCAG	1 cut(s)	199
BseNI	ACTGG	3 cut(s)	683, 1257, 1468
BseSI	GKGCMC	1 cut(s)	837
BseX3I	CGGCCG	1 cut(s)	597
BseXI	GCAGC	2 cut(s)	3, 382
Bsh1236I	CGCG	4 cut(s)	276, 346, 387, 699
Bsh1285I	CGRYCG	1 cut(s)	600
BshFI	GGCC	7 cut(s)	104, 393, 432, 599, 616, 716, 1025
BshNI	GGYRCC	2 cut(s)	453, 1350
BshVI	ATCGAT	1 cut(s)	916
BsiEI	CGRYCG	1 cut(s)	600
BsiHKAI	GWGCWC	1 cut(s)	8
BslFI	GGGAC	1 cut(s)	1109
BslI	CCNNNNNNNGG	6 cut(s)	100, 442, 463, 595, 1008, 1009
BsmAI	GTCTC	3 cut(s)	205, 399, 1240
BsmBI	CGTCTC	2 cut(s)	205, 399
BsmFI	GGGAC	1 cut(s)	1109
BsnI	GGCC	7 cut(s)	104, 393, 432, 599, 616, 716, 1025
Bso31I	GGTCTC	1 cut(s)	1240
Bsp1286I	GDGCHC	2 cut(s)	8, 837
Bsp13I	TCCGGA	1 cut(s)	523
Bsp1407I	TGTACA	1 cut(s)	735
Bsp143I	GATC	8 cut(s)	23, 520, 573, 602, 708, 721, 939, 1389
Bsp19I	CCATGG	1 cut(s)	99
BspANI	GGCC	7 cut(s)	104, 393, 432, 599, 616, 716, 1025
BspCNI	CTCAG	2 cut(s)	4, 198
BspDI	ATCGAT	1 cut(s)	916
BspEI	TCCGGA	1 cut(s)	523
BspFNI	CGCG	4 cut(s)	276, 346, 387, 699
BspLI	GGNNCC	4 cut(s)	455, 522, 1000, 1352
BspPI	GGATC	6 cut(s)	18, 515, 528, 610, 716, 934
BspT107I	GGYRCC	2 cut(s)	453, 1350
BspTNI	GGTCTC	1 cut(s)	1240
BsrFI	RCCGGY	4 cut(s)	502, 588, 616, 1092
BsrGI	TGTACA	1 cut(s)	735
BsrI	ACTGG	3 cut(s)	683, 1257, 1468
BssAI	RCCGGY	4 cut(s)	502, 588, 616, 1092
BssECI	CCNNGG	5 cut(s)	99, 385, 427, 805, 1008
BssMI	GATC	8 cut(s)	23, 520, 573, 602, 708, 721, 939, 1389
BssNI	GRCGYC	2 cut(s)	252, 1351
BssT1I	CCWWGG	1 cut(s)	99
Bst2UI	CCWGG	4 cut(s)	641, 806, 1009, 1232
Bst4CI	ACNGT	3 cut(s)	142, 1336, 1397
Bst6I	CTCTTC	3 cut(s)	152, 464, 969
BstACI	GRCGYC	2 cut(s)	252, 1351
BstAUI	TGTACA	1 cut(s)	735
BstBAI	YACGTR	1 cut(s)	547
BstC8I	GCNNGC	8 cut(s)	106, 129, 381, 385, 594, 618, 1090, 1094
BstDEI	CTNAG	4 cut(s)	12, 185, 1050, 1244
BstDSI	CCRYGG	2 cut(s)	99, 385
BstENI	CCTNNNNNAGG	1 cut(s)	461
BstF5I	GGATG	3 cut(s)	829, 985, 1044
BstFNI	CGCG	4 cut(s)	276, 346, 387, 699
BstH2I	RGCGCY	3 cut(s)	53, 650, 1354
BstHHI	GCGC	4 cut(s)	52, 649, 670, 1353
BstKTI	GATC	8 cut(s)	26, 523, 576, 605, 711, 724, 942, 1392
BstMAI	GTCTC	3 cut(s)	205, 399, 1240
BstMBI	GATC	8 cut(s)	23, 520, 573, 602, 708, 721, 939, 1389
BstMCI	CGRYCG	1 cut(s)	600
BstMWI	GCNNNNNNNGC	3 cut(s)	49, 376, 667
BstNI	CCWGG	4 cut(s)	641, 806, 1009, 1232
BstSCI	CCNGG	7 cut(s)	427, 489, 639, 804, 1007, 1222, 1230
BstSFI	CTRYAG	2 cut(s)	1107, 1177
BstSLI	GKGCMC	1 cut(s)	837
BstUI	CGCG	4 cut(s)	276, 346, 387, 699
BstV1I	GCAGC	2 cut(s)	3, 382
BstX2I	RGATCY	2 cut(s)	520, 939
BstYI	RGATCY	2 cut(s)	520, 939
BstZI	CGGCCG	1 cut(s)	597
Bsu15I	ATCGAT	1 cut(s)	916
BsuRI	GGCC	7 cut(s)	104, 393, 432, 599, 616, 716, 1025
BsuTUI	ATCGAT	1 cut(s)	916
BtgI	CCRYGG	2 cut(s)	99, 385
BtrI	CACGTC	1 cut(s)	409
BtsCI	GGATG	3 cut(s)	829, 985, 1044
BtsIMutI	CAGTG	3 cut(s)	880, 1144, 1264
Cac8I	GCNNGC	8 cut(s)	106, 129, 381, 385, 594, 618, 1090, 1094
CfoI	GCGC	4 cut(s)	52, 649, 670, 1353
Cfr10I	RCCGGY	4 cut(s)	502, 588, 616, 1092
Cfr13I	GGNCC	5 cut(s)	103, 466, 487, 802, 1023
Cfr42I	CCGCGG	1 cut(s)	388
ClaI	ATCGAT	1 cut(s)	916
CpoI	CGGWCCG	1 cut(s)	487
CseI	GACGC	3 cut(s)	260, 352, 705
CsiI	ACCWGGT	1 cut(s)	639
Csp6I	GTAC	7 cut(s)	325, 424, 454, 622, 676, 736, 1322
CspI	CGGWCCG	1 cut(s)	487
CviAII	CATG	7 cut(s)	100, 442, 704, 712, 907, 995, 1034
CviQI	GTAC	7 cut(s)	325, 424, 454, 622, 676, 736, 1322
DdeI	CTNAG	4 cut(s)	12, 185, 1050, 1244
DinI	GGCGCC	1 cut(s)	1352
DpnI	GATC	8 cut(s)	25, 522, 575, 604, 710, 723, 941, 1391
DpnII	GATC	8 cut(s)	23, 520, 573, 602, 708, 721, 939, 1389
DriI	GACNNNNNGTC	2 cut(s)	412, 808
EaeI	YGGCCR	3 cut(s)	391, 430, 597
EagI	CGGCCG	1 cut(s)	597
Eam1104I	CTCTTC	3 cut(s)	152, 464, 969
Eam1105I	GACNNNNNGTC	2 cut(s)	412, 808
EarI	CTCTTC	3 cut(s)	152, 464, 969
EciI	GGCGGA	2 cut(s)	548, 815
EclXI	CGGCCG	1 cut(s)	597
Eco130I	CCWWGG	1 cut(s)	99
Eco31I	GGTCTC	1 cut(s)	1240
Eco32I	GATATC	1 cut(s)	871
Eco47I	GGWCC	3 cut(s)	466, 487, 802
Eco47III	AGCGCT	1 cut(s)	51
Eco52I	CGGCCG	1 cut(s)	597
EcoNI	CCTNNNNNAGG	1 cut(s)	461
EcoO109I	RGGNCCY	1 cut(s)	466
EcoRII	CCWGG	4 cut(s)	639, 804, 1007, 1230
EcoRV	GATATC	1 cut(s)	871
EcoT14I	CCWWGG	1 cut(s)	99
EcoT22I	ATGCAT	1 cut(s)	1044
EgeI	GGCGCC	1 cut(s)	1352
EheI	GGCGCC	1 cut(s)	1352
ErhI	CCWWGG	1 cut(s)	99
Esp3I	CGTCTC	2 cut(s)	205, 399
FaeI	CATG	7 cut(s)	103, 445, 707, 715, 910, 998, 1037
FalI	AAGNNNNNCTT	2 cut(s)	1358, 1390
FaqI	GGGAC	1 cut(s)	1109
FatI	CATG	7 cut(s)	99, 441, 703, 711, 906, 994, 1033
FauI	CCCGC	6 cut(s)	113, 199, 214, 281, 392, 406
FbaI	TGATCA	1 cut(s)	708
FblI	GTMKAC	1 cut(s)	1018
Fnu4HI	GCNGC	8 cut(s)	17, 195, 371, 388, 391, 597, 791, 1026
FokI	GGATG	3 cut(s)	836, 992, 1051
Fsp4HI	GCNGC	8 cut(s)	17, 195, 371, 388, 391, 597, 791, 1026
GlaI	GCGC	4 cut(s)	51, 648, 669, 1352
GluI	GCNGC	8 cut(s)	17, 195, 371, 388, 391, 597, 791, 1026
GsuI	CTGGAG	1 cut(s)	683
HaeII	RGCGCY	3 cut(s)	53, 650, 1354
HaeIII	GGCC	7 cut(s)	104, 393, 432, 599, 616, 716, 1025
HgaI	GACGC	3 cut(s)	260, 352, 705
HhaI	GCGC	4 cut(s)	52, 649, 670, 1353
Hin1I	GRCGYC	2 cut(s)	252, 1351
Hin1II	CATG	7 cut(s)	103, 445, 707, 715, 910, 998, 1037
Hin6I	GCGC	4 cut(s)	50, 647, 668, 1351
HinP1I	GCGC	4 cut(s)	50, 647, 668, 1351
HincII	GTYRAC	2 cut(s)	580, 1019
HindII	GTYRAC	2 cut(s)	580, 1019
HindIII	AAGCTT	1 cut(s)	1367
HinfI	GANTC	8 cut(s)	90, 482, 1015, 1063, 1103, 1202, 1227, 1266
HphI	GGTGA	6 cut(s)	343, 829, 836, 878, 1085, 1309
Hpy166II	GTNNAC	4 cut(s)	325, 351, 580, 1019
Hpy188I	TCNGA	7 cut(s)	23, 61, 487, 607, 721, 944, 1281
Hpy188III	TCNNGA	2 cut(s)	340, 524
Hpy8I	GTNNAC	4 cut(s)	325, 351, 580, 1019
Hpy99I	CGWCG	8 cut(s)	155, 254, 269, 317, 346, 418, 632, 1023
HpyAV	CCTTC	4 cut(s)	190, 225, 229, 814
HpyCH4III	ACNGT	3 cut(s)	142, 1336, 1397
HpyCH4IV	ACGT	4 cut(s)	264, 408, 546, 1046
HpyCH4V	TGCA	3 cut(s)	764, 1042, 1361
HpyF10VI	GCNNNNNNNGC	3 cut(s)	49, 376, 667
HpyF3I	CTNAG	4 cut(s)	12, 185, 1050, 1244
HpySE526I	ACGT	4 cut(s)	264, 408, 546, 1046
Hsp92I	GRCGYC	2 cut(s)	252, 1351
Hsp92II	CATG	7 cut(s)	103, 445, 707, 715, 910, 998, 1037
HspAI	GCGC	4 cut(s)	50, 647, 668, 1351
KasI	GGCGCC	1 cut(s)	1350
Kpn2I	TCCGGA	1 cut(s)	523
KpnI	GGTACC	1 cut(s)	457
KroI	GCCGGC	2 cut(s)	616, 1092
KroNI	GCCGGC	2 cut(s)	618, 1094
Ksp22I	TGATCA	1 cut(s)	708
KspI	CCGCGG	1 cut(s)	388
Kzo9I	GATC	8 cut(s)	23, 520, 573, 602, 708, 721, 939, 1389
LmnI	GCTCC	1 cut(s)	24
Lsp1109I	GCAGC	2 cut(s)	3, 382
LweI	GCATC	2 cut(s)	369, 1029
MabI	ACCWGGT	1 cut(s)	639
MaeII	ACGT	4 cut(s)	264, 408, 546, 1046
MaeIII	GTNAC	1 cut(s)	1397
MalI	GATC	8 cut(s)	25, 522, 575, 604, 710, 723, 941, 1391
MboI	GATC	8 cut(s)	23, 520, 573, 602, 708, 721, 939, 1389
MboII	GAAGA	7 cut(s)	139, 451, 547, 895, 986, 1175, 1195
MfeI	CAATTG	1 cut(s)	959
MflI	RGATCY	2 cut(s)	520, 939
MhlI	GDGCHC	2 cut(s)	8, 837
MluCI	AATT	4 cut(s)	289, 295, 959, 1251
Mly113I	GGCGCC	1 cut(s)	1351
MlyI	GAGTC	2 cut(s)	1024, 1097
MmeI	TCCRAC	2 cut(s)	51, 324
Mph1103I	ATGCAT	1 cut(s)	1044
MroI	TCCGGA	1 cut(s)	523
MroNI	GCCGGC	2 cut(s)	616, 1092
MseI	TTAA	2 cut(s)	756, 852
MspA1I	CMGCKG	1 cut(s)	387
MspR9I	CCNGG	7 cut(s)	429, 491, 641, 806, 1009, 1224, 1232
MunI	CAATTG	1 cut(s)	959
MvaI	CCWGG	4 cut(s)	641, 806, 1009, 1232
MvnI	CGCG	4 cut(s)	276, 346, 387, 699
MwoI	GCNNNNNNNGC	3 cut(s)	49, 376, 667
NaeI	GCCGGC	2 cut(s)	618, 1094
NarI	GGCGCC	1 cut(s)	1351
NciI	CCSGG	3 cut(s)	429, 491, 1224
NcoI	CCATGG	1 cut(s)	99
NdeII	GATC	8 cut(s)	23, 520, 573, 602, 708, 721, 939, 1389
NgoMIV	GCCGGC	2 cut(s)	616, 1092
NlaIII	CATG	7 cut(s)	103, 445, 707, 715, 910, 998, 1037
NlaIV	GGNNCC	4 cut(s)	455, 522, 1000, 1352
NmuCI	GTSAC	1 cut(s)	1397
NsiI	ATGCAT	1 cut(s)	1044
PcsI	WCGNNNNNNNCGW	3 cut(s)	273, 363, 506
PdiI	GCCGGC	2 cut(s)	618, 1094
PfeI	GAWTC	6 cut(s)	90, 482, 1063, 1202, 1227, 1266
PflFI	GACNNNGTC	2 cut(s)	254, 491
PflMI	CCANNNNNTGG	1 cut(s)	442
PkrI	GCNGC	8 cut(s)	18, 196, 372, 389, 392, 598, 792, 1027
PleI	GAGTC	2 cut(s)	1023, 1097
PluTI	GGCGCC	1 cut(s)	1354
PpsI	GAGTC	2 cut(s)	1023, 1097
Ppu21I	YACGTR	1 cut(s)	547
PpuMI	RGGWCCY	1 cut(s)	466
PshBI	ATTAAT	1 cut(s)	852
PsiI	TTATAA	2 cut(s)	861, 1472
Psp5II	RGGWCCY	1 cut(s)	466
Psp6I	CCWGG	4 cut(s)	639, 804, 1007, 1230
PspGI	CCWGG	4 cut(s)	639, 804, 1007, 1230
PspN4I	GGNNCC	4 cut(s)	455, 522, 1000, 1352
PspPI	GGNCC	5 cut(s)	103, 466, 487, 802, 1023
PspPPI	RGGWCCY	1 cut(s)	466
PsuI	RGATCY	2 cut(s)	520, 939
PsyI	GACNNNGTC	2 cut(s)	254, 491
RsaI	GTAC	7 cut(s)	326, 425, 455, 623, 677, 737, 1323
RsaNI	GTAC	7 cut(s)	325, 424, 454, 622, 676, 736, 1322
Rsr2I	CGGWCCG	1 cut(s)	487
RsrII	CGGWCCG	1 cut(s)	487
SacII	CCGCGG	1 cut(s)	388
SalI	GTCGAC	1 cut(s)	1017
SaqAI	TTAA	2 cut(s)	756, 852
SatI	GCNGC	8 cut(s)	17, 195, 371, 388, 391, 597, 791, 1026
Sau3AI	GATC	8 cut(s)	23, 520, 573, 602, 708, 721, 939, 1389
Sau96I	GGNCC	5 cut(s)	103, 466, 487, 802, 1023
ScaI	AGTACT	1 cut(s)	677
SchI	GAGTC	2 cut(s)	1024, 1097
ScrFI	CCNGG	7 cut(s)	429, 491, 641, 806, 1009, 1224, 1232
SduI	GDGCHC	2 cut(s)	8, 837
SexAI	ACCWGGT	1 cut(s)	639
SfaNI	GCATC	2 cut(s)	369, 1029
SfcI	CTRYAG	2 cut(s)	1107, 1177
SfoI	GGCGCC	1 cut(s)	1352
Sfr303I	CCGCGG	1 cut(s)	388
SgrAI	CRCCGGYG	1 cut(s)	502
SgrBI	CCGCGG	1 cut(s)	388
SinI	GGWCC	3 cut(s)	466, 487, 802
SmlI	CTYRAG	4 cut(s)	419, 473, 565, 794
SmoI	CTYRAG	4 cut(s)	419, 473, 565, 794
Sse9I	AATT	4 cut(s)	289, 295, 959, 1251
SspDI	GGCGCC	1 cut(s)	1350
StyD4I	CCNGG	7 cut(s)	427, 489, 639, 804, 1007, 1222, 1230
StyI	CCWWGG	1 cut(s)	99
TaaI	ACNGT	3 cut(s)	142, 1336, 1397
TaiI	ACGT	4 cut(s)	267, 411, 549, 1049
TaqI	TCGA	6 cut(s)	366, 879, 916, 1018, 1205, 1388
TasI	AATT	4 cut(s)	289, 295, 959, 1251
TatI	WGTACW	2 cut(s)	675, 735
TauI	GCSGC	6 cut(s)	197, 390, 393, 599, 793, 1028
TfiI	GAWTC	6 cut(s)	90, 482, 1063, 1202, 1227, 1266
Tru1I	TTAA	2 cut(s)	756, 852
Tru9I	TTAA	2 cut(s)	756, 852
TscAI	CASTG	3 cut(s)	880, 1144, 1264
TseFI	GTSAC	1 cut(s)	1397
TseI	GCWGC	2 cut(s)	16, 370
Tsp45I	GTSAC	1 cut(s)	1397
TspDTI	ATGAA	4 cut(s)	895, 987, 1304, 1439
TspRI	CASTG	3 cut(s)	880, 1144, 1264
Tth111I	GACNNNGTC	2 cut(s)	254, 491
Van91I	CCANNNNNTGG	1 cut(s)	442
VpaK11BI	GGWCC	3 cut(s)	466, 487, 802
VspI	ATTAAT	1 cut(s)	852
XagI	CCTNNNNNAGG	1 cut(s)	461
XmiI	GTMKAC	1 cut(s)	1018
ZrmI	AGTACT	1 cut(s)	677
Zsp2I	ATGCAT	1 cut(s)	1044

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.