Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0011167

Physical Location & Seq

Genomic Coordinates Reverse (-)

15649509 .. 15652558

Gene Structure 3050 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG149100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGAGCACGACTGAGCTGCTCCGATCCAACAAAAGCAAGAAGCCCAAAGCGCTGTCCTCCGATGACCGCCACACCCTAAACCCGACCCGATTCCTCTCCATGGCCCGCAAATCCTCTCTCATCAAGCAAGCCCTCGCCACCGTCCTCTTCGTCGTCCTCCTCTACGCCACCCTCAACACCTTCCTCAGCCCCGCCGCCGTCTCCCCCGCCCTCCCCTCCTTCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCATACGACGCCGTCATCAACGTCGTTTCCCGCGACAACGACCCCAATTCTAACTCCAACCCCAACCCCAAGCCCGTCGTCAAAGTGTACCTCTACGACCTCCCGACGCGGTTCACCTACGGCATCATCGAGCAGCACTCGCTCGCCCGCGGCGGCCACCCCGCCGGCGACGTGTCGTCGCTCAAGTACCCCGGCCACCAGCACATGGGGGAGTGGTACCTCTTCAAGGACCTCCTCAAGCCCGAATCGGACCGGGTCGGGTCGCCGGTGGCGAGGGTTTTGGATCCGGACGAGGCGGACTTTTTCTACGTGCCGTTCTTCTCCTCCTTGAGCTTGATCGTCAACACGAACCGGCAGGCGGCCGGATCGGAGGAGAGGCCGGCGTACAGCGACGAGGAGAACCAGGTGGCGCTGGTGGAGTGGCTGGAGGAGCAGGAGTACTGGAAGCGGAACAATGGACGCGACCATGTGATCATGGCCTCTGATCCCAATGCTCTGTACAAAGTGCTTGATAGTGTGAAAAATGCAGTCTTGCTTGTTTGTGATTTTGGGCGGCTCAAGGCGGACCAGGGGTCGCTGGTGAAGGATGTCATTGTGCCCTATTCTCACCGGATTAATACTTATAATGGTGATATCAGTGTCGAAAATCGCAACACCTTGCTGTTCTTCATGGGCAATCGATTTCGCAAGGAGGGGGGAAAGATCCGAGATTTGCTTTTCCAATTGCTTGAAAATGAAGAGGATGTCATAGTGAAACATGGAACCCAATCCAGGGAGAGTCGACGGGCCGCTACACATGGGATGCATACGTCTAAGTTCTGTTTGAATCCTGCTGGTGATACTCCATCAGCTTGCCGGCTTTTTGACTCTATAGTTAGTTTGTGTGTCCCTGTGGTAATCAGTGATAGTATTGAGCTGCCATTTGAAGATGTTATAGACTACAGGAAGATAGCCATATTTGTTGAATCGAATACAGCTTTGAAGCCGGGATTCCTGGTCTCAATGCTAAGAGAAATTACCAGTGAGAGAATCCTTGAATATCAGAAAGAGATGAATGAGGTCAGTACAAATTCTTTGTATTTTGGCTGTTTCATTTTTCGTTTCTTGATGTTGATTGTCAAATTTCTTTCCATATCTCTCTCTGCTGTTGCTTCTTTTATTGGTTTCCACATTTTGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009832 GO:0009834 GO:0009987 GO:0010383 GO:0010393 GO:0010410 GO:0010413 GO:0010417 GO:0012505 GO:0015020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016763 GO:0017144 GO:0031221 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0035884 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045488 GO:0045489 GO:0045491 GO:0045492 GO:0047517 GO:0070589 GO:0070592 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0080116 GO:0097708 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exostosin

Protein Analysis

478

Amino Acids

53.56

Weight (kDa)

6.44

Isoelectric Point (pI)

43.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exostosin_GT47	PF03016	110 - 420	8.5e-77	Exostosin GT47 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35100
fragaria_vesca	FvH4_3g12450 FvH4_3g12450
malus_domestica	MD05G1250200.v1.1 MD10G1231200.v1.1
prunus_persica	Prupe.4G113400_v2.0.a1
pyrus_communis	pycom03g23690 pycom05g22820 pycom10g19440
rosa_chinensis	RchiOBHm_Chr5g0020381
rosa_laevigata	RLG00000032518
rosa_multiflora	Rmu_sc0002087.1_g000001 Rmu_sc0007157.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057880
rosa_rugosa	Rorug05G0058900
rosa_samantha	Rh5AG149100 Rh5BG148800 Rh5CG160400 Rh5DG147500
rosa_wichuraiana	Rw5G013220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	879
Acc65I	GGTACC	1 cut(s)	471
AccB1I	GGYRCC	1 cut(s)	471
AccB7I	CCANNNNNTGG	2 cut(s)	460, 1429
AccI	GTMKAC	1 cut(s)	1036
AccII	CGCG	4 cut(s)	288, 364, 405, 717
AccIII	TCCGGA	1 cut(s)	541
AclWI	GGATC	6 cut(s)	18, 533, 546, 628, 734, 952
AcoI	YGGCCR	3 cut(s)	409, 448, 615
AcsI	RAATTY	2 cut(s)	1324, 1376
AcyI	GRCGYC	1 cut(s)	264
AfaI	GTAC	7 cut(s)	344, 443, 473, 641, 695, 755, 1321
AfeI	AGCGCT	1 cut(s)	51
AfiI	CCNNNNNNNGG	7 cut(s)	100, 460, 481, 613, 1026, 1027, 1429
AflIII	ACRYGT	1 cut(s)	426
AgsI	TTSAA	7 cut(s)	481, 986, 1081, 1181, 1220, 1237, 1292
AhdI	GACNNNNNGTC	2 cut(s)	430, 826
AjiI	CACGTC	1 cut(s)	427
AjnI	CCWGG	4 cut(s)	657, 822, 1025, 1248
AluBI	AGCT	5 cut(s)	16, 588, 1106, 1171, 1232
AluI	AGCT	5 cut(s)	16, 588, 1106, 1171, 1232
Alw21I	GWGCWC	1 cut(s)	8
Alw26I	GTCTC	2 cut(s)	205, 1258
AlwI	GGATC	6 cut(s)	18, 533, 546, 628, 734, 952
Aor13HI	TCCGGA	1 cut(s)	541
Aor51HI	AGCGCT	1 cut(s)	51
AoxI	GGCC	7 cut(s)	102, 409, 448, 615, 632, 732, 1041
ApeKI	GCWGC	3 cut(s)	16, 388, 1171
ApoI	RAATTY	2 cut(s)	1324, 1376
AseI	ATTAAT	1 cut(s)	870
Asp718I	GGTACC	1 cut(s)	471
AspLEI	GCGC	2 cut(s)	52, 667
AspS9I	GGNCC	5 cut(s)	103, 484, 505, 820, 1041
AsuC2I	CCSGG	3 cut(s)	447, 509, 1242
AsuHPI	GGTGA	5 cut(s)	361, 847, 854, 896, 1103
AvaII	GGWCC	3 cut(s)	484, 505, 820
BaeGI	GKGCMC	1 cut(s)	855
BamHI	GGATCC	1 cut(s)	538
BanI	GGYRCC	1 cut(s)	471
Bbv12I	GWGCWC	1 cut(s)	8
BbvCI	CCTCAGC	1 cut(s)	185
BbvI	GCAGC	3 cut(s)	3, 400, 1158
BccI	CCATC	1 cut(s)	1108
BceAI	ACGGC	4 cut(s)	182, 251, 391, 553
BcgI	CGANNNNNNTGC	1 cut(s)	32
BciT130I	CCWGG	4 cut(s)	659, 824, 1027, 1250
BclI	TGATCA	1 cut(s)	726
BcnI	CCSGG	3 cut(s)	447, 509, 1242
BcoDI	GTCTC	2 cut(s)	205, 1258
BfmI	CTRYAG	2 cut(s)	1125, 1195
BfoI	RGCGCY	2 cut(s)	53, 668
BisI	GCNGC	9 cut(s)	17, 195, 389, 406, 409, 615, 809, 1044, 1172
BlsI	GCNGC	9 cut(s)	18, 196, 390, 407, 410, 616, 810, 1045, 1173
BmcAI	AGTACT	1 cut(s)	695
Bme1390I	CCNGG	7 cut(s)	447, 509, 659, 824, 1027, 1242, 1250
Bme18I	GGWCC	3 cut(s)	484, 505, 820
BmeRI	GACNNNNNGTC	2 cut(s)	430, 826
BmgBI	CACGTC	1 cut(s)	427
BmgT120I	GGNCC	5 cut(s)	103, 484, 505, 820, 1041
BmiI	GGNNCC	3 cut(s)	473, 540, 1018
BmrFI	CCNGG	7 cut(s)	447, 509, 659, 824, 1027, 1242, 1250
BmsI	GCATC	2 cut(s)	387, 1047
BplI	GAGNNNNNCTC	2 cut(s)	377, 409
BpmI	CTGGAG	1 cut(s)	701
Bpu10I	CCTNAGC	1 cut(s)	185
BpuEI	CTTGAG	4 cut(s)	422, 476, 604, 797
BpuMI	CCSGG	3 cut(s)	447, 509, 1242
Bsa29I	ATCGAT	1 cut(s)	934
BsaAI	YACGTR	1 cut(s)	565
BsaHI	GRCGYC	1 cut(s)	264
BsaI	GGTCTC	1 cut(s)	1258
BsaJI	CCNNGG	5 cut(s)	99, 403, 445, 823, 1026
BsaWI	WCCGGW	2 cut(s)	541, 864
BsaXI	ACNNNNNCTCC	2 cut(s)	677, 707
Bsc4I	CCNNNNNNNGG	7 cut(s)	100, 460, 481, 613, 1026, 1027, 1429
Bse118I	RCCGGY	5 cut(s)	419, 520, 606, 634, 1110
Bse1I	ACTGG	2 cut(s)	701, 1275
BseAI	TCCGGA	1 cut(s)	541
BseBI	CCWGG	4 cut(s)	659, 824, 1027, 1250
BseCI	ATCGAT	1 cut(s)	934
BseDI	CCNNGG	5 cut(s)	99, 403, 445, 823, 1026
BseGI	GGATG	3 cut(s)	847, 1003, 1062
BseLI	CCNNNNNNNGG	7 cut(s)	100, 460, 481, 613, 1026, 1027, 1429
BseMII	CTCAG	1 cut(s)	199
BseNI	ACTGG	2 cut(s)	701, 1275
BseSI	GKGCMC	1 cut(s)	855
BseX3I	CGGCCG	1 cut(s)	615
BseXI	GCAGC	3 cut(s)	3, 400, 1158
Bsh1236I	CGCG	4 cut(s)	288, 364, 405, 717
Bsh1285I	CGRYCG	1 cut(s)	618
BshFI	GGCC	7 cut(s)	104, 411, 450, 617, 634, 734, 1043
BshNI	GGYRCC	1 cut(s)	471
BshVI	ATCGAT	1 cut(s)	934
BsiEI	CGRYCG	1 cut(s)	618
BsiHKAI	GWGCWC	1 cut(s)	8
BslFI	GGGAC	1 cut(s)	1127
BslI	CCNNNNNNNGG	7 cut(s)	100, 460, 481, 613, 1026, 1027, 1429
BsmAI	GTCTC	2 cut(s)	205, 1258
BsmBI	CGTCTC	1 cut(s)	205
BsmFI	GGGAC	1 cut(s)	1127
BsnI	GGCC	7 cut(s)	104, 411, 450, 617, 634, 734, 1043
Bso31I	GGTCTC	1 cut(s)	1258
Bsp1286I	GDGCHC	2 cut(s)	8, 855
Bsp13I	TCCGGA	1 cut(s)	541
Bsp1407I	TGTACA	1 cut(s)	753
Bsp143I	GATC	7 cut(s)	23, 538, 591, 620, 726, 739, 957
Bsp19I	CCATGG	1 cut(s)	99
BspANI	GGCC	7 cut(s)	104, 411, 450, 617, 634, 734, 1043
BspCNI	CTCAG	2 cut(s)	4, 198
BspDI	ATCGAT	1 cut(s)	934
BspEI	TCCGGA	1 cut(s)	541
BspFNI	CGCG	4 cut(s)	288, 364, 405, 717
BspLI	GGNNCC	3 cut(s)	473, 540, 1018
BspPI	GGATC	6 cut(s)	18, 533, 546, 628, 734, 952
BspT107I	GGYRCC	1 cut(s)	471
BspTNI	GGTCTC	1 cut(s)	1258
BsrFI	RCCGGY	5 cut(s)	419, 520, 606, 634, 1110
BsrGI	TGTACA	1 cut(s)	753
BsrI	ACTGG	2 cut(s)	701, 1275
BssAI	RCCGGY	5 cut(s)	419, 520, 606, 634, 1110
BssECI	CCNNGG	5 cut(s)	99, 403, 445, 823, 1026
BssMI	GATC	7 cut(s)	23, 538, 591, 620, 726, 739, 957
BssNI	GRCGYC	1 cut(s)	264
BssT1I	CCWWGG	1 cut(s)	99
Bst2UI	CCWGG	4 cut(s)	659, 824, 1027, 1250
Bst4CI	ACNGT	1 cut(s)	142
Bst6I	CTCTTC	3 cut(s)	152, 482, 987
BstACI	GRCGYC	1 cut(s)	264
BstAUI	TGTACA	1 cut(s)	753
BstBAI	YACGTR	1 cut(s)	565
BstC8I	GCNNGC	9 cut(s)	106, 129, 399, 403, 421, 612, 636, 1108, 1112
BstDEI	CTNAG	4 cut(s)	12, 185, 1068, 1262
BstDSI	CCRYGG	2 cut(s)	99, 403
BstENI	CCTNNNNNAGG	1 cut(s)	479
BstF5I	GGATG	3 cut(s)	847, 1003, 1062
BstFNI	CGCG	4 cut(s)	288, 364, 405, 717
BstH2I	RGCGCY	2 cut(s)	53, 668
BstHHI	GCGC	2 cut(s)	52, 667
BstKTI	GATC	7 cut(s)	26, 541, 594, 623, 729, 742, 960
BstMAI	GTCTC	2 cut(s)	205, 1258
BstMBI	GATC	7 cut(s)	23, 538, 591, 620, 726, 739, 957
BstMCI	CGRYCG	1 cut(s)	618
BstMWI	GCNNNNNNNGC	3 cut(s)	49, 394, 685
BstNI	CCWGG	4 cut(s)	659, 824, 1027, 1250
BstSCI	CCNGG	7 cut(s)	445, 507, 657, 822, 1025, 1240, 1248
BstSFI	CTRYAG	2 cut(s)	1125, 1195
BstSLI	GKGCMC	1 cut(s)	855
BstUI	CGCG	4 cut(s)	288, 364, 405, 717
BstV1I	GCAGC	3 cut(s)	3, 400, 1158
BstX2I	RGATCY	2 cut(s)	538, 957
BstYI	RGATCY	2 cut(s)	538, 957
BstZI	CGGCCG	1 cut(s)	615
Bsu15I	ATCGAT	1 cut(s)	934
BsuRI	GGCC	7 cut(s)	104, 411, 450, 617, 634, 734, 1043
BsuTUI	ATCGAT	1 cut(s)	934
BtgI	CCRYGG	2 cut(s)	99, 403
BtrI	CACGTC	1 cut(s)	427
BtsCI	GGATG	3 cut(s)	847, 1003, 1062
BtsIMutI	CAGTG	3 cut(s)	898, 1162, 1282
Cac8I	GCNNGC	9 cut(s)	106, 129, 399, 403, 421, 612, 636, 1108, 1112
CfoI	GCGC	2 cut(s)	52, 667
Cfr10I	RCCGGY	5 cut(s)	419, 520, 606, 634, 1110
Cfr13I	GGNCC	5 cut(s)	103, 484, 505, 820, 1041
Cfr42I	CCGCGG	1 cut(s)	406
ClaI	ATCGAT	1 cut(s)	934
CpoI	CGGWCCG	1 cut(s)	505
CseI	GACGC	3 cut(s)	272, 370, 723
CsiI	ACCWGGT	1 cut(s)	657
Csp6I	GTAC	7 cut(s)	343, 442, 472, 640, 694, 754, 1320
CspI	CGGWCCG	1 cut(s)	505
CviAII	CATG	8 cut(s)	100, 460, 722, 730, 925, 1013, 1052, 1434
CviQI	GTAC	7 cut(s)	343, 442, 472, 640, 694, 754, 1320
DdeI	CTNAG	4 cut(s)	12, 185, 1068, 1262
DpnI	GATC	7 cut(s)	25, 540, 593, 622, 728, 741, 959
DpnII	GATC	7 cut(s)	23, 538, 591, 620, 726, 739, 957
DriI	GACNNNNNGTC	2 cut(s)	430, 826
EaeI	YGGCCR	3 cut(s)	409, 448, 615
EagI	CGGCCG	1 cut(s)	615
Eam1104I	CTCTTC	3 cut(s)	152, 482, 987
Eam1105I	GACNNNNNGTC	2 cut(s)	430, 826
EarI	CTCTTC	3 cut(s)	152, 482, 987
EciI	GGCGGA	2 cut(s)	566, 833
EclXI	CGGCCG	1 cut(s)	615
Eco130I	CCWWGG	1 cut(s)	99
Eco31I	GGTCTC	1 cut(s)	1258
Eco32I	GATATC	1 cut(s)	889
Eco47I	GGWCC	3 cut(s)	484, 505, 820
Eco47III	AGCGCT	1 cut(s)	51
Eco52I	CGGCCG	1 cut(s)	615
EcoNI	CCTNNNNNAGG	1 cut(s)	479
EcoO109I	RGGNCCY	1 cut(s)	484
EcoRII	CCWGG	4 cut(s)	657, 822, 1025, 1248
EcoRV	GATATC	1 cut(s)	889
EcoT14I	CCWWGG	1 cut(s)	99
EcoT22I	ATGCAT	1 cut(s)	1062
ErhI	CCWWGG	1 cut(s)	99
Esp3I	CGTCTC	1 cut(s)	205
FaeI	CATG	8 cut(s)	103, 463, 725, 733, 928, 1016, 1055, 1437
FaqI	GGGAC	1 cut(s)	1127
FatI	CATG	8 cut(s)	99, 459, 721, 729, 924, 1012, 1051, 1433
FauI	CCCGC	6 cut(s)	113, 199, 214, 293, 410, 424
FbaI	TGATCA	1 cut(s)	726
FblI	GTMKAC	1 cut(s)	1036
Fnu4HI	GCNGC	9 cut(s)	17, 195, 389, 406, 409, 615, 809, 1044, 1172
FokI	GGATG	3 cut(s)	854, 1010, 1069
Fsp4HI	GCNGC	9 cut(s)	17, 195, 389, 406, 409, 615, 809, 1044, 1172
GlaI	GCGC	2 cut(s)	51, 666
GluI	GCNGC	9 cut(s)	17, 195, 389, 406, 409, 615, 809, 1044, 1172
GsuI	CTGGAG	1 cut(s)	701
HaeII	RGCGCY	2 cut(s)	53, 668
HaeIII	GGCC	7 cut(s)	104, 411, 450, 617, 634, 734, 1043
HgaI	GACGC	3 cut(s)	272, 370, 723
HhaI	GCGC	2 cut(s)	52, 667
Hin1I	GRCGYC	1 cut(s)	264
Hin1II	CATG	8 cut(s)	103, 463, 725, 733, 928, 1016, 1055, 1437
Hin6I	GCGC	2 cut(s)	50, 665
HinP1I	GCGC	2 cut(s)	50, 665
HincII	GTYRAC	2 cut(s)	598, 1037
HindII	GTYRAC	2 cut(s)	598, 1037
HinfI	GANTC	8 cut(s)	90, 500, 1033, 1081, 1121, 1220, 1245, 1284
HphI	GGTGA	5 cut(s)	361, 847, 854, 896, 1103
Hpy166II	GTNNAC	4 cut(s)	343, 369, 598, 1037
Hpy188I	TCNGA	7 cut(s)	23, 61, 505, 625, 739, 962, 1299
Hpy188III	TCNNGA	3 cut(s)	358, 542, 1360
Hpy8I	GTNNAC	4 cut(s)	343, 369, 598, 1037
Hpy99I	CGWCG	9 cut(s)	155, 266, 281, 335, 364, 428, 436, 650, 1041
HpyAV	CCTTC	4 cut(s)	190, 229, 235, 832
HpyCH4III	ACNGT	1 cut(s)	142
HpyCH4IV	ACGT	4 cut(s)	276, 426, 564, 1064
HpyCH4V	TGCA	2 cut(s)	782, 1060
HpyF10VI	GCNNNNNNNGC	3 cut(s)	49, 394, 685
HpyF3I	CTNAG	4 cut(s)	12, 185, 1068, 1262
HpySE526I	ACGT	4 cut(s)	276, 426, 564, 1064
Hsp92I	GRCGYC	1 cut(s)	264
Hsp92II	CATG	8 cut(s)	103, 463, 725, 733, 928, 1016, 1055, 1437
HspAI	GCGC	2 cut(s)	50, 665
Kpn2I	TCCGGA	1 cut(s)	541
KpnI	GGTACC	1 cut(s)	475
KroI	GCCGGC	3 cut(s)	419, 634, 1110
KroNI	GCCGGC	3 cut(s)	421, 636, 1112
Ksp22I	TGATCA	1 cut(s)	726
KspI	CCGCGG	1 cut(s)	406
Kzo9I	GATC	7 cut(s)	23, 538, 591, 620, 726, 739, 957
LmnI	GCTCC	2 cut(s)	24, 685
Lsp1109I	GCAGC	3 cut(s)	3, 400, 1158
LweI	GCATC	2 cut(s)	387, 1047
MabI	ACCWGGT	1 cut(s)	657
MaeII	ACGT	4 cut(s)	276, 426, 564, 1064
MalI	GATC	7 cut(s)	25, 540, 593, 622, 728, 741, 959
MboI	GATC	7 cut(s)	23, 538, 591, 620, 726, 739, 957
MboII	GAAGA	7 cut(s)	139, 469, 565, 913, 1004, 1193, 1213
MfeI	CAATTG	1 cut(s)	977
MflI	RGATCY	2 cut(s)	538, 957
MhlI	GDGCHC	2 cut(s)	8, 855
MluCI	AATT	5 cut(s)	301, 977, 1269, 1324, 1376
MlyI	GAGTC	2 cut(s)	1042, 1115
MmeI	TCCRAC	2 cut(s)	51, 336
Mph1103I	ATGCAT	1 cut(s)	1062
MreI	CGCCGGCG	1 cut(s)	419
MroI	TCCGGA	1 cut(s)	541
MroNI	GCCGGC	3 cut(s)	419, 634, 1110
MseI	TTAA	1 cut(s)	870
MspA1I	CMGCKG	1 cut(s)	405
MspR9I	CCNGG	7 cut(s)	447, 509, 659, 824, 1027, 1242, 1250
MunI	CAATTG	1 cut(s)	977
MvaI	CCWGG	4 cut(s)	659, 824, 1027, 1250
MvnI	CGCG	4 cut(s)	288, 364, 405, 717
MwoI	GCNNNNNNNGC	3 cut(s)	49, 394, 685
NaeI	GCCGGC	3 cut(s)	421, 636, 1112
NciI	CCSGG	3 cut(s)	447, 509, 1242
NcoI	CCATGG	1 cut(s)	99
NdeII	GATC	7 cut(s)	23, 538, 591, 620, 726, 739, 957
NgoMIV	GCCGGC	3 cut(s)	419, 634, 1110
NlaIII	CATG	8 cut(s)	103, 463, 725, 733, 928, 1016, 1055, 1437
NlaIV	GGNNCC	3 cut(s)	473, 540, 1018
NsiI	ATGCAT	1 cut(s)	1062
PcsI	WCGNNNNNNNCGW	3 cut(s)	285, 381, 524
PdiI	GCCGGC	3 cut(s)	421, 636, 1112
PfeI	GAWTC	6 cut(s)	90, 500, 1081, 1220, 1245, 1284
PflFI	GACNNNGTC	2 cut(s)	266, 509
PflMI	CCANNNNNTGG	2 cut(s)	460, 1429
PkrI	GCNGC	9 cut(s)	18, 196, 390, 407, 410, 616, 810, 1045, 1173
PleI	GAGTC	2 cut(s)	1041, 1115
PpsI	GAGTC	2 cut(s)	1041, 1115
Ppu21I	YACGTR	1 cut(s)	565
PpuMI	RGGWCCY	1 cut(s)	484
PshBI	ATTAAT	1 cut(s)	870
PsiI	TTATAA	1 cut(s)	879
Psp5II	RGGWCCY	1 cut(s)	484
Psp6I	CCWGG	4 cut(s)	657, 822, 1025, 1248
PspGI	CCWGG	4 cut(s)	657, 822, 1025, 1248
PspN4I	GGNNCC	3 cut(s)	473, 540, 1018
PspPI	GGNCC	5 cut(s)	103, 484, 505, 820, 1041
PspPPI	RGGWCCY	1 cut(s)	484
PsuI	RGATCY	2 cut(s)	538, 957
PsyI	GACNNNGTC	2 cut(s)	266, 509
RsaI	GTAC	7 cut(s)	344, 443, 473, 641, 695, 755, 1321
RsaNI	GTAC	7 cut(s)	343, 442, 472, 640, 694, 754, 1320
Rsr2I	CGGWCCG	1 cut(s)	505
RsrII	CGGWCCG	1 cut(s)	505
SacII	CCGCGG	1 cut(s)	406
SalI	GTCGAC	1 cut(s)	1035
SaqAI	TTAA	1 cut(s)	870
SatI	GCNGC	9 cut(s)	17, 195, 389, 406, 409, 615, 809, 1044, 1172
Sau3AI	GATC	7 cut(s)	23, 538, 591, 620, 726, 739, 957
Sau96I	GGNCC	5 cut(s)	103, 484, 505, 820, 1041
ScaI	AGTACT	1 cut(s)	695
SchI	GAGTC	2 cut(s)	1042, 1115
ScrFI	CCNGG	7 cut(s)	447, 509, 659, 824, 1027, 1242, 1250
SduI	GDGCHC	2 cut(s)	8, 855
SexAI	ACCWGGT	1 cut(s)	657
SfaNI	GCATC	2 cut(s)	387, 1047
SfcI	CTRYAG	2 cut(s)	1125, 1195
Sfr303I	CCGCGG	1 cut(s)	406
SgrAI	CRCCGGYG	2 cut(s)	419, 520
SgrBI	CCGCGG	1 cut(s)	406
SinI	GGWCC	3 cut(s)	484, 505, 820
SmlI	CTYRAG	4 cut(s)	437, 491, 583, 812
SmoI	CTYRAG	4 cut(s)	437, 491, 583, 812
Sse9I	AATT	5 cut(s)	301, 977, 1269, 1324, 1376
StyD4I	CCNGG	7 cut(s)	445, 507, 657, 822, 1025, 1240, 1248
StyI	CCWWGG	1 cut(s)	99
TaaI	ACNGT	1 cut(s)	142
TaiI	ACGT	4 cut(s)	279, 429, 567, 1067
TaqI	TCGA	5 cut(s)	384, 897, 934, 1036, 1223
TasI	AATT	5 cut(s)	301, 977, 1269, 1324, 1376
TatI	WGTACW	3 cut(s)	693, 753, 1319
TauI	GCSGC	6 cut(s)	197, 408, 411, 617, 811, 1046
TfiI	GAWTC	6 cut(s)	90, 500, 1081, 1220, 1245, 1284
Tru1I	TTAA	1 cut(s)	870
Tru9I	TTAA	1 cut(s)	870
TscAI	CASTG	3 cut(s)	898, 1162, 1282
TseI	GCWGC	3 cut(s)	16, 388, 1171
TspDTI	ATGAA	4 cut(s)	913, 1005, 1322, 1336
TspRI	CASTG	3 cut(s)	898, 1162, 1282
Tth111I	GACNNNGTC	2 cut(s)	266, 509
Van91I	CCANNNNNTGG	2 cut(s)	460, 1429
VpaK11BI	GGWCC	3 cut(s)	484, 505, 820
VspI	ATTAAT	1 cut(s)	870
XagI	CCTNNNNNAGG	1 cut(s)	479
XapI	RAATTY	2 cut(s)	1324, 1376
XmiI	GTMKAC	1 cut(s)	1036
ZrmI	AGTACT	1 cut(s)	695
Zsp2I	ATGCAT	1 cut(s)	1062

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.