Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0011167

Physical Location & Seq

Genomic Coordinates Reverse (-)

15527480 .. 15530363

Gene Structure 2884 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G013220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGAGCACGACTGAGCTGCTCCGATCCAACAAAAGCAAGAAGCCCAAAGCGCTGTCCTCCGATGACCGCCACACCCTAAACCCGACCCGATTCCTCTCCATGGCCCGCAAATCCTCTCTCATCAAGCAAGCCCTCGCCACCGTCCTCTTCGTCGTCCTCCTCTACGCCACCCTCAACACCTTCCTCAGCCCCGCCGCCGTCTCCCCCGCCCTCCCCTCCTTCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCCCATACGACGCCGTCATCAACGTCGTTTCCCGCGACAACGAGCCCAATTCTAATTCCAACCCCAAGCCCGTCGTCAAAGTGTACCTCTACGACCTCCCGACGCGGTTCACCTACGGCATCATCGAGCAGCACTCGCTCGCCCGCGGCGGCCACCCCGCCGGCGACGTGTCGTCGCTCAAGTACCCCGGCCACCAGCACATGGGGGAGTGGTACCTCTTCAAGGACCTCCTCAAGCCCGAATCGGACCGGGTCGGGTCGCCGGTGGCGAGGGTTTTGGATCCGGACGAGGCGGACTTTTTCTACGTGCCGTTCTTCTCCTCCTTGAGCTTGATCGTCAACACGAACCGGCAGGCGGCCGGATCGGAGGAGAGGCCGGCGTACAGCGACGAGGAGAACCAGGTGGCGCTGGTGGAGTGGCTGGAGGCGCAGGAGTACTGGAAGCGGAACAATGGACGCGACCATGTGATCATGGCCTCTGATCCCAATGCTCTGTACAAAGTGCTTGATAGTGTGAAAAATGCAGTCTTGCTTGTTTGTGATTTTGGGCGGCTCAAGGCGGACCAGGGGTCGCTGGTGAAGGATGTCATTGTGCCCTATTCTCACCGGATTAATACTTATAATGGTGATATCAGTGTCGAAAATCGCAACACCTTGCTGTTCTTCATGGGCAATCGATTTCGCAAGGAGGGGGGAAAGATCCGAGATTTGCTTTTCCAATTGCTTGAAAATGAAGAGGATGTCATAGTGAAACATGGAACCCAATCCAGGGAGAGTCGACGGGCCGCTACACATGGGATGCATACGTCTAAGTTCTGTTTGAATCCTGCTGGTGATACTCCATCAGCTTGCCGGCTTTTTGACTCTATAGTTAGTTTGTGTGTCCCTGTGGTAATCAGTGATAGTATTGAGCTGCCATTTGAAGATGTTATAGACTACAGGAAGATAGCCATATTTGTTGAATCGAATACAGCTTTGAAGCCGGGATTCCTGGTCTCAATGCTAAGAGAAATTACCAGTGAGAGAATCCTTGAATATCAGAAAGAGATGAATGAGGTGAAGCATTATTTTCAATATGGAGTACCAAATGGAACTGTGAATGAGATATGGCGCCATATTGCACAGAAGCTTCCCTTTATCAAGTTGTCGATCAACCGTGACAAACGCCTTGTAAAGAGGGATATGAATGTGCCAGACTGCTCTTGTGTCTGCTCAAACCAGACTGGGATTATAACCAGCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009832 GO:0009834 GO:0009987 GO:0010383 GO:0010393 GO:0010410 GO:0010413 GO:0010417 GO:0012505 GO:0015020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016763 GO:0017144 GO:0031221 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0035884 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045488 GO:0045489 GO:0045491 GO:0045492 GO:0047517 GO:0070589 GO:0070592 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0080116 GO:0097708 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exostosin

Protein Analysis

497

Amino Acids

55.89

Weight (kDa)

7.63

Isoelectric Point (pI)

43.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exostosin_GT47	PF03016	107 - 417	1.1e-76	Exostosin GT47 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35100
fragaria_vesca	FvH4_3g12450 FvH4_3g12450
malus_domestica	MD05G1250200.v1.1 MD10G1231200.v1.1
prunus_persica	Prupe.4G113400_v2.0.a1
pyrus_communis	pycom03g23690 pycom05g22820 pycom10g19440
rosa_chinensis	RchiOBHm_Chr5g0020381
rosa_laevigata	RLG00000032518
rosa_multiflora	Rmu_sc0002087.1_g000001 Rmu_sc0007157.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057880
rosa_rugosa	Rorug05G0058900
rosa_samantha	Rh5AG149100 Rh5BG148800 Rh5CG160400 Rh5DG147500
rosa_wichuraiana	Rw5G013220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	870, 1481
Acc65I	GGTACC	1 cut(s)	462
AccB1I	GGYRCC	2 cut(s)	462, 1359
AccB7I	CCANNNNNTGG	1 cut(s)	451
AccI	GTMKAC	1 cut(s)	1027
AccII	CGCG	4 cut(s)	285, 355, 396, 708
AccIII	TCCGGA	1 cut(s)	532
AclWI	GGATC	6 cut(s)	18, 524, 537, 619, 725, 943
AcoI	YGGCCR	3 cut(s)	400, 439, 606
AcyI	GRCGYC	2 cut(s)	261, 1360
AfaI	GTAC	7 cut(s)	335, 434, 464, 632, 686, 746, 1332
AfeI	AGCGCT	1 cut(s)	51
AfiI	CCNNNNNNNGG	6 cut(s)	100, 451, 472, 604, 1017, 1018
AflIII	ACRYGT	1 cut(s)	417
AgsI	TTSAA	8 cut(s)	472, 977, 1072, 1172, 1211, 1228, 1283, 1322
AhdI	GACNNNNNGTC	2 cut(s)	421, 817
AjiI	CACGTC	1 cut(s)	418
AjnI	CCWGG	4 cut(s)	648, 813, 1016, 1239
AluBI	AGCT	6 cut(s)	16, 579, 1097, 1162, 1223, 1378
AluI	AGCT	6 cut(s)	16, 579, 1097, 1162, 1223, 1378
Alw21I	GWGCWC	1 cut(s)	8
Alw26I	GTCTC	2 cut(s)	205, 1249
AlwI	GGATC	6 cut(s)	18, 524, 537, 619, 725, 943
Aor13HI	TCCGGA	1 cut(s)	532
Aor51HI	AGCGCT	1 cut(s)	51
AoxI	GGCC	7 cut(s)	102, 400, 439, 606, 623, 723, 1032
ApeKI	GCWGC	3 cut(s)	16, 379, 1162
AseI	ATTAAT	1 cut(s)	861
Asp718I	GGTACC	1 cut(s)	462
AspLEI	GCGC	4 cut(s)	52, 658, 679, 1362
AspS9I	GGNCC	5 cut(s)	103, 475, 496, 811, 1032
AsuC2I	CCSGG	3 cut(s)	438, 500, 1233
AsuHPI	GGTGA	6 cut(s)	352, 838, 845, 887, 1094, 1318
AvaII	GGWCC	3 cut(s)	475, 496, 811
BaeGI	GKGCMC	1 cut(s)	846
BamHI	GGATCC	1 cut(s)	529
BanI	GGYRCC	2 cut(s)	462, 1359
BanII	GRGCYC	1 cut(s)	297
Bbv12I	GWGCWC	1 cut(s)	8
BbvCI	CCTCAGC	1 cut(s)	185
BbvI	GCAGC	3 cut(s)	3, 391, 1149
BccI	CCATC	1 cut(s)	1099
BceAI	ACGGC	4 cut(s)	182, 248, 382, 544
BcgI	CGANNNNNNTGC	1 cut(s)	32
BciT130I	CCWGG	4 cut(s)	650, 815, 1018, 1241
BclI	TGATCA	1 cut(s)	717
BcnI	CCSGG	3 cut(s)	438, 500, 1233
BcoDI	GTCTC	2 cut(s)	205, 1249
BfmI	CTRYAG	2 cut(s)	1116, 1186
BfoI	RGCGCY	3 cut(s)	53, 659, 1363
BisI	GCNGC	9 cut(s)	17, 195, 380, 397, 400, 606, 800, 1035, 1163
BlsI	GCNGC	9 cut(s)	18, 196, 381, 398, 401, 607, 801, 1036, 1164
BmcAI	AGTACT	1 cut(s)	686
Bme1390I	CCNGG	7 cut(s)	438, 500, 650, 815, 1018, 1233, 1241
Bme18I	GGWCC	3 cut(s)	475, 496, 811
BmeRI	GACNNNNNGTC	2 cut(s)	421, 817
BmgBI	CACGTC	1 cut(s)	418
BmgT120I	GGNCC	5 cut(s)	103, 475, 496, 811, 1032
BmiI	GGNNCC	4 cut(s)	464, 531, 1009, 1361
BmrFI	CCNGG	7 cut(s)	438, 500, 650, 815, 1018, 1233, 1241
BmrI	ACTGGG	1 cut(s)	1482
BmsI	GCATC	2 cut(s)	378, 1038
BmuI	ACTGGG	1 cut(s)	1482
BplI	GAGNNNNNCTC	2 cut(s)	368, 400
BpmI	CTGGAG	1 cut(s)	692
Bpu10I	CCTNAGC	1 cut(s)	185
BpuEI	CTTGAG	4 cut(s)	413, 467, 595, 788
BpuMI	CCSGG	3 cut(s)	438, 500, 1233
Bsa29I	ATCGAT	1 cut(s)	925
BsaAI	YACGTR	1 cut(s)	556
BsaHI	GRCGYC	2 cut(s)	261, 1360
BsaI	GGTCTC	1 cut(s)	1249
BsaJI	CCNNGG	5 cut(s)	99, 394, 436, 814, 1017
BsaWI	WCCGGW	2 cut(s)	532, 855
Bsc4I	CCNNNNNNNGG	6 cut(s)	100, 451, 472, 604, 1017, 1018
Bse118I	RCCGGY	5 cut(s)	410, 511, 597, 625, 1101
Bse1I	ACTGG	3 cut(s)	692, 1266, 1477
BseAI	TCCGGA	1 cut(s)	532
BseBI	CCWGG	4 cut(s)	650, 815, 1018, 1241
BseCI	ATCGAT	1 cut(s)	925
BseDI	CCNNGG	5 cut(s)	99, 394, 436, 814, 1017
BseGI	GGATG	3 cut(s)	838, 994, 1053
BseLI	CCNNNNNNNGG	6 cut(s)	100, 451, 472, 604, 1017, 1018
BseMII	CTCAG	1 cut(s)	199
BseNI	ACTGG	3 cut(s)	692, 1266, 1477
BseSI	GKGCMC	1 cut(s)	846
BseX3I	CGGCCG	1 cut(s)	606
BseXI	GCAGC	3 cut(s)	3, 391, 1149
Bsh1236I	CGCG	4 cut(s)	285, 355, 396, 708
Bsh1285I	CGRYCG	1 cut(s)	609
BshFI	GGCC	7 cut(s)	104, 402, 441, 608, 625, 725, 1034
BshNI	GGYRCC	2 cut(s)	462, 1359
BshVI	ATCGAT	1 cut(s)	925
BsiEI	CGRYCG	1 cut(s)	609
BsiHKAI	GWGCWC	1 cut(s)	8
BslFI	GGGAC	1 cut(s)	1118
BslI	CCNNNNNNNGG	6 cut(s)	100, 451, 472, 604, 1017, 1018
BsmAI	GTCTC	2 cut(s)	205, 1249
BsmBI	CGTCTC	1 cut(s)	205
BsmFI	GGGAC	1 cut(s)	1118
BsnI	GGCC	7 cut(s)	104, 402, 441, 608, 625, 725, 1034
Bso31I	GGTCTC	1 cut(s)	1249
Bsp1286I	GDGCHC	3 cut(s)	8, 297, 846
Bsp13I	TCCGGA	1 cut(s)	532
Bsp1407I	TGTACA	1 cut(s)	744
Bsp143I	GATC	8 cut(s)	23, 529, 582, 611, 717, 730, 948, 1398
Bsp19I	CCATGG	1 cut(s)	99
BspANI	GGCC	7 cut(s)	104, 402, 441, 608, 625, 725, 1034
BspCNI	CTCAG	2 cut(s)	4, 198
BspDI	ATCGAT	1 cut(s)	925
BspEI	TCCGGA	1 cut(s)	532
BspFNI	CGCG	4 cut(s)	285, 355, 396, 708
BspLI	GGNNCC	4 cut(s)	464, 531, 1009, 1361
BspPI	GGATC	6 cut(s)	18, 524, 537, 619, 725, 943
BspT107I	GGYRCC	2 cut(s)	462, 1359
BspTNI	GGTCTC	1 cut(s)	1249
BsrFI	RCCGGY	5 cut(s)	410, 511, 597, 625, 1101
BsrGI	TGTACA	1 cut(s)	744
BsrI	ACTGG	3 cut(s)	692, 1266, 1477
BssAI	RCCGGY	5 cut(s)	410, 511, 597, 625, 1101
BssECI	CCNNGG	5 cut(s)	99, 394, 436, 814, 1017
BssMI	GATC	8 cut(s)	23, 529, 582, 611, 717, 730, 948, 1398
BssNI	GRCGYC	2 cut(s)	261, 1360
BssT1I	CCWWGG	1 cut(s)	99
Bst2UI	CCWGG	4 cut(s)	650, 815, 1018, 1241
Bst4CI	ACNGT	3 cut(s)	142, 1345, 1406
Bst6I	CTCTTC	3 cut(s)	152, 473, 978
BstACI	GRCGYC	2 cut(s)	261, 1360
BstAUI	TGTACA	1 cut(s)	744
BstBAI	YACGTR	1 cut(s)	556
BstC8I	GCNNGC	9 cut(s)	106, 129, 390, 394, 412, 603, 627, 1099, 1103
BstDEI	CTNAG	4 cut(s)	12, 185, 1059, 1253
BstDSI	CCRYGG	2 cut(s)	99, 394
BstENI	CCTNNNNNAGG	1 cut(s)	470
BstF5I	GGATG	3 cut(s)	838, 994, 1053
BstFNI	CGCG	4 cut(s)	285, 355, 396, 708
BstH2I	RGCGCY	3 cut(s)	53, 659, 1363
BstHHI	GCGC	4 cut(s)	52, 658, 679, 1362
BstKTI	GATC	8 cut(s)	26, 532, 585, 614, 720, 733, 951, 1401
BstMAI	GTCTC	2 cut(s)	205, 1249
BstMBI	GATC	8 cut(s)	23, 529, 582, 611, 717, 730, 948, 1398
BstMCI	CGRYCG	1 cut(s)	609
BstMWI	GCNNNNNNNGC	3 cut(s)	49, 385, 676
BstNI	CCWGG	4 cut(s)	650, 815, 1018, 1241
BstSCI	CCNGG	7 cut(s)	436, 498, 648, 813, 1016, 1231, 1239
BstSFI	CTRYAG	2 cut(s)	1116, 1186
BstSLI	GKGCMC	1 cut(s)	846
BstUI	CGCG	4 cut(s)	285, 355, 396, 708
BstV1I	GCAGC	3 cut(s)	3, 391, 1149
BstX2I	RGATCY	2 cut(s)	529, 948
BstYI	RGATCY	2 cut(s)	529, 948
BstZI	CGGCCG	1 cut(s)	606
Bsu15I	ATCGAT	1 cut(s)	925
BsuRI	GGCC	7 cut(s)	104, 402, 441, 608, 625, 725, 1034
BsuTUI	ATCGAT	1 cut(s)	925
BtgI	CCRYGG	2 cut(s)	99, 394
BtrI	CACGTC	1 cut(s)	418
BtsCI	GGATG	3 cut(s)	838, 994, 1053
BtsIMutI	CAGTG	3 cut(s)	889, 1153, 1273
Cac8I	GCNNGC	9 cut(s)	106, 129, 390, 394, 412, 603, 627, 1099, 1103
CfoI	GCGC	4 cut(s)	52, 658, 679, 1362
Cfr10I	RCCGGY	5 cut(s)	410, 511, 597, 625, 1101
Cfr13I	GGNCC	5 cut(s)	103, 475, 496, 811, 1032
Cfr42I	CCGCGG	1 cut(s)	397
ClaI	ATCGAT	1 cut(s)	925
CpoI	CGGWCCG	1 cut(s)	496
CseI	GACGC	3 cut(s)	269, 361, 714
CsiI	ACCWGGT	1 cut(s)	648
Csp6I	GTAC	7 cut(s)	334, 433, 463, 631, 685, 745, 1331
CspI	CGGWCCG	1 cut(s)	496
CviAII	CATG	7 cut(s)	100, 451, 713, 721, 916, 1004, 1043
CviQI	GTAC	7 cut(s)	334, 433, 463, 631, 685, 745, 1331
DdeI	CTNAG	4 cut(s)	12, 185, 1059, 1253
DinI	GGCGCC	1 cut(s)	1361
DpnI	GATC	8 cut(s)	25, 531, 584, 613, 719, 732, 950, 1400
DpnII	GATC	8 cut(s)	23, 529, 582, 611, 717, 730, 948, 1398
DriI	GACNNNNNGTC	2 cut(s)	421, 817
EaeI	YGGCCR	3 cut(s)	400, 439, 606
EagI	CGGCCG	1 cut(s)	606
Eam1104I	CTCTTC	3 cut(s)	152, 473, 978
Eam1105I	GACNNNNNGTC	2 cut(s)	421, 817
EarI	CTCTTC	3 cut(s)	152, 473, 978
EciI	GGCGGA	2 cut(s)	557, 824
EclXI	CGGCCG	1 cut(s)	606
Eco130I	CCWWGG	1 cut(s)	99
Eco24I	GRGCYC	1 cut(s)	297
Eco31I	GGTCTC	1 cut(s)	1249
Eco32I	GATATC	1 cut(s)	880
Eco47I	GGWCC	3 cut(s)	475, 496, 811
Eco47III	AGCGCT	1 cut(s)	51
Eco52I	CGGCCG	1 cut(s)	606
EcoNI	CCTNNNNNAGG	1 cut(s)	470
EcoO109I	RGGNCCY	1 cut(s)	475
EcoRII	CCWGG	4 cut(s)	648, 813, 1016, 1239
EcoRV	GATATC	1 cut(s)	880
EcoT14I	CCWWGG	1 cut(s)	99
EcoT22I	ATGCAT	1 cut(s)	1053
EcoT38I	GRGCYC	1 cut(s)	297
EgeI	GGCGCC	1 cut(s)	1361
EheI	GGCGCC	1 cut(s)	1361
ErhI	CCWWGG	1 cut(s)	99
Esp3I	CGTCTC	1 cut(s)	205
FaeI	CATG	7 cut(s)	103, 454, 716, 724, 919, 1007, 1046
FalI	AAGNNNNNCTT	2 cut(s)	1367, 1399
FaqI	GGGAC	1 cut(s)	1118
FatI	CATG	7 cut(s)	99, 450, 712, 720, 915, 1003, 1042
FauI	CCCGC	6 cut(s)	113, 199, 214, 290, 401, 415
FbaI	TGATCA	1 cut(s)	717
FblI	GTMKAC	1 cut(s)	1027
Fnu4HI	GCNGC	9 cut(s)	17, 195, 380, 397, 400, 606, 800, 1035, 1163
FokI	GGATG	3 cut(s)	845, 1001, 1060
FriOI	GRGCYC	1 cut(s)	297
Fsp4HI	GCNGC	9 cut(s)	17, 195, 380, 397, 400, 606, 800, 1035, 1163
GlaI	GCGC	4 cut(s)	51, 657, 678, 1361
GluI	GCNGC	9 cut(s)	17, 195, 380, 397, 400, 606, 800, 1035, 1163
GsuI	CTGGAG	1 cut(s)	692
HaeII	RGCGCY	3 cut(s)	53, 659, 1363
HaeIII	GGCC	7 cut(s)	104, 402, 441, 608, 625, 725, 1034
HgaI	GACGC	3 cut(s)	269, 361, 714
HhaI	GCGC	4 cut(s)	52, 658, 679, 1362
Hin1I	GRCGYC	2 cut(s)	261, 1360
Hin1II	CATG	7 cut(s)	103, 454, 716, 724, 919, 1007, 1046
Hin6I	GCGC	4 cut(s)	50, 656, 677, 1360
HinP1I	GCGC	4 cut(s)	50, 656, 677, 1360
HincII	GTYRAC	2 cut(s)	589, 1028
HindII	GTYRAC	2 cut(s)	589, 1028
HindIII	AAGCTT	1 cut(s)	1376
HinfI	GANTC	8 cut(s)	90, 491, 1024, 1072, 1112, 1211, 1236, 1275
HphI	GGTGA	6 cut(s)	352, 838, 845, 887, 1094, 1318
Hpy166II	GTNNAC	4 cut(s)	334, 360, 589, 1028
Hpy188I	TCNGA	7 cut(s)	23, 61, 496, 616, 730, 953, 1290
Hpy188III	TCNNGA	2 cut(s)	349, 533
Hpy8I	GTNNAC	4 cut(s)	334, 360, 589, 1028
Hpy99I	CGWCG	9 cut(s)	155, 263, 278, 326, 355, 419, 427, 641, 1032
HpyAV	CCTTC	4 cut(s)	190, 229, 235, 823
HpyCH4III	ACNGT	3 cut(s)	142, 1345, 1406
HpyCH4IV	ACGT	4 cut(s)	273, 417, 555, 1055
HpyCH4V	TGCA	3 cut(s)	773, 1051, 1370
HpyF10VI	GCNNNNNNNGC	3 cut(s)	49, 385, 676
HpyF3I	CTNAG	4 cut(s)	12, 185, 1059, 1253
HpySE526I	ACGT	4 cut(s)	273, 417, 555, 1055
Hsp92I	GRCGYC	2 cut(s)	261, 1360
Hsp92II	CATG	7 cut(s)	103, 454, 716, 724, 919, 1007, 1046
HspAI	GCGC	4 cut(s)	50, 656, 677, 1360
KasI	GGCGCC	1 cut(s)	1359
Kpn2I	TCCGGA	1 cut(s)	532
KpnI	GGTACC	1 cut(s)	466
KroI	GCCGGC	3 cut(s)	410, 625, 1101
KroNI	GCCGGC	3 cut(s)	412, 627, 1103
Ksp22I	TGATCA	1 cut(s)	717
KspI	CCGCGG	1 cut(s)	397
Kzo9I	GATC	8 cut(s)	23, 529, 582, 611, 717, 730, 948, 1398
LmnI	GCTCC	1 cut(s)	24
Lsp1109I	GCAGC	3 cut(s)	3, 391, 1149
LweI	GCATC	2 cut(s)	378, 1038
MabI	ACCWGGT	1 cut(s)	648
MaeII	ACGT	4 cut(s)	273, 417, 555, 1055
MaeIII	GTNAC	1 cut(s)	1406
MalI	GATC	8 cut(s)	25, 531, 584, 613, 719, 732, 950, 1400
MboI	GATC	8 cut(s)	23, 529, 582, 611, 717, 730, 948, 1398
MboII	GAAGA	7 cut(s)	139, 460, 556, 904, 995, 1184, 1204
MfeI	CAATTG	1 cut(s)	968
MflI	RGATCY	2 cut(s)	529, 948
MhlI	GDGCHC	3 cut(s)	8, 297, 846
MluCI	AATT	4 cut(s)	298, 304, 968, 1260
Mly113I	GGCGCC	1 cut(s)	1360
MlyI	GAGTC	2 cut(s)	1033, 1106
MmeI	TCCRAC	2 cut(s)	51, 333
Mph1103I	ATGCAT	1 cut(s)	1053
MreI	CGCCGGCG	1 cut(s)	410
MroI	TCCGGA	1 cut(s)	532
MroNI	GCCGGC	3 cut(s)	410, 625, 1101
MseI	TTAA	1 cut(s)	861
MspA1I	CMGCKG	1 cut(s)	396
MspR9I	CCNGG	7 cut(s)	438, 500, 650, 815, 1018, 1233, 1241
MunI	CAATTG	1 cut(s)	968
MvaI	CCWGG	4 cut(s)	650, 815, 1018, 1241
MvnI	CGCG	4 cut(s)	285, 355, 396, 708
MwoI	GCNNNNNNNGC	3 cut(s)	49, 385, 676
NaeI	GCCGGC	3 cut(s)	412, 627, 1103
NarI	GGCGCC	1 cut(s)	1360
NciI	CCSGG	3 cut(s)	438, 500, 1233
NcoI	CCATGG	1 cut(s)	99
NdeII	GATC	8 cut(s)	23, 529, 582, 611, 717, 730, 948, 1398
NgoMIV	GCCGGC	3 cut(s)	410, 625, 1101
NlaIII	CATG	7 cut(s)	103, 454, 716, 724, 919, 1007, 1046
NlaIV	GGNNCC	4 cut(s)	464, 531, 1009, 1361
NmuCI	GTSAC	1 cut(s)	1406
NsiI	ATGCAT	1 cut(s)	1053
PcsI	WCGNNNNNNNCGW	3 cut(s)	282, 372, 515
PdiI	GCCGGC	3 cut(s)	412, 627, 1103
PfeI	GAWTC	6 cut(s)	90, 491, 1072, 1211, 1236, 1275
PflFI	GACNNNGTC	2 cut(s)	263, 500
PflMI	CCANNNNNTGG	1 cut(s)	451
PkrI	GCNGC	9 cut(s)	18, 196, 381, 398, 401, 607, 801, 1036, 1164
PleI	GAGTC	2 cut(s)	1032, 1106
PluTI	GGCGCC	1 cut(s)	1363
PpsI	GAGTC	2 cut(s)	1032, 1106
Ppu21I	YACGTR	1 cut(s)	556
PpuMI	RGGWCCY	1 cut(s)	475
PshBI	ATTAAT	1 cut(s)	861
PsiI	TTATAA	2 cut(s)	870, 1481
Psp5II	RGGWCCY	1 cut(s)	475
Psp6I	CCWGG	4 cut(s)	648, 813, 1016, 1239
PspGI	CCWGG	4 cut(s)	648, 813, 1016, 1239
PspN4I	GGNNCC	4 cut(s)	464, 531, 1009, 1361
PspPI	GGNCC	5 cut(s)	103, 475, 496, 811, 1032
PspPPI	RGGWCCY	1 cut(s)	475
PsuI	RGATCY	2 cut(s)	529, 948
PsyI	GACNNNGTC	2 cut(s)	263, 500
RsaI	GTAC	7 cut(s)	335, 434, 464, 632, 686, 746, 1332
RsaNI	GTAC	7 cut(s)	334, 433, 463, 631, 685, 745, 1331
Rsr2I	CGGWCCG	1 cut(s)	496
RsrII	CGGWCCG	1 cut(s)	496
SacII	CCGCGG	1 cut(s)	397
SalI	GTCGAC	1 cut(s)	1026
SaqAI	TTAA	1 cut(s)	861
SatI	GCNGC	9 cut(s)	17, 195, 380, 397, 400, 606, 800, 1035, 1163
Sau3AI	GATC	8 cut(s)	23, 529, 582, 611, 717, 730, 948, 1398
Sau96I	GGNCC	5 cut(s)	103, 475, 496, 811, 1032
ScaI	AGTACT	1 cut(s)	686
SchI	GAGTC	2 cut(s)	1033, 1106
ScrFI	CCNGG	7 cut(s)	438, 500, 650, 815, 1018, 1233, 1241
SduI	GDGCHC	3 cut(s)	8, 297, 846
SexAI	ACCWGGT	1 cut(s)	648
SfaNI	GCATC	2 cut(s)	378, 1038
SfcI	CTRYAG	2 cut(s)	1116, 1186
SfoI	GGCGCC	1 cut(s)	1361
Sfr303I	CCGCGG	1 cut(s)	397
SgrAI	CRCCGGYG	2 cut(s)	410, 511
SgrBI	CCGCGG	1 cut(s)	397
SinI	GGWCC	3 cut(s)	475, 496, 811
SmlI	CTYRAG	4 cut(s)	428, 482, 574, 803
SmoI	CTYRAG	4 cut(s)	428, 482, 574, 803
Sse9I	AATT	4 cut(s)	298, 304, 968, 1260
SspDI	GGCGCC	1 cut(s)	1359
StyD4I	CCNGG	7 cut(s)	436, 498, 648, 813, 1016, 1231, 1239
StyI	CCWWGG	1 cut(s)	99
TaaI	ACNGT	3 cut(s)	142, 1345, 1406
TaiI	ACGT	4 cut(s)	276, 420, 558, 1058
TaqI	TCGA	6 cut(s)	375, 888, 925, 1027, 1214, 1397
TasI	AATT	4 cut(s)	298, 304, 968, 1260
TatI	WGTACW	2 cut(s)	684, 744
TauI	GCSGC	6 cut(s)	197, 399, 402, 608, 802, 1037
TfiI	GAWTC	6 cut(s)	90, 491, 1072, 1211, 1236, 1275
Tru1I	TTAA	1 cut(s)	861
Tru9I	TTAA	1 cut(s)	861
TscAI	CASTG	3 cut(s)	889, 1153, 1273
TseFI	GTSAC	1 cut(s)	1406
TseI	GCWGC	3 cut(s)	16, 379, 1162
Tsp45I	GTSAC	1 cut(s)	1406
TspDTI	ATGAA	4 cut(s)	904, 996, 1313, 1448
TspRI	CASTG	3 cut(s)	889, 1153, 1273
Tth111I	GACNNNGTC	2 cut(s)	263, 500
Van91I	CCANNNNNTGG	1 cut(s)	451
VpaK11BI	GGWCC	3 cut(s)	475, 496, 811
VspI	ATTAAT	1 cut(s)	861
XagI	CCTNNNNNAGG	1 cut(s)	470
XmiI	GTMKAC	1 cut(s)	1027
ZrmI	AGTACT	1 cut(s)	686
Zsp2I	ATGCAT	1 cut(s)	1053

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.