Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0011167

Physical Location & Seq

Genomic Coordinates Forward (+)

79865198 .. 79868112

Gene Structure 2915 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00057880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGAGCACGACTGAGCTGCTCCGATCCAACAAAAGCAAGAAGCCCAAAGCGCCGTCCTCCGATGACCGCCACACCACCCTAAACCCGACCCGATTCCTCTCCATGGCCCGCAAATCCTCTCTCATCAAGCAAGCCCTCGCCACCGTCCTCTTCGTCGTCCTCCTCTACGCCACCCTCAACACCTTCCTCAGCCCCGCCGCCGTCTCCCCCGCCCTCCCCTCCTTCTCCTCCTCCTCCTCCCCATACGACGCCTTCATCAACGTCGTTTCCCGCGACAACGACCCCAATTCTAATTCCAACCCCAAGCCCGTCGTCAAAGTGTACCTCTACGACCTCCCGACGCGGTTCACCTACGGCATCATCGAGCAGCACTCGCTCGCCCGCGGCGGCCACCCCGCCGACGACGTGTCGTCGCTCAAGTACCCCGGCCACCAGCACATGGGGGAGTGGTACCTCTTCAAGGACCTCCTCAAGCCCGAATCGGAGCGGGTCGGGTCGCCGGTGGAGAGGGTTTTGGATCCGGACGAGGCGGACTTGTTCTACGTGCCGTTCTTCTCCTCCTTGAGCTTGATCGTCAACACGAACCGGCAGGCGGCCGGATCGGAGGAGAGGCCGTCGTACAGCGACGAGGAGAACCAGGTGGCGCTGGTGGAGTGGCTGGAGGCGCAGGAGTACTGGAAGCGGAACAATGGACGCGACCATGTGATCATGGCCTCTGATCCCAATGCTCTGTACAAAGTGCTTGATAGTGTGAAAAATGCAGTCTTGCTTGTTTGTGATTTTGGGCGGCTCAAGGCGGACCAGGGGTCGCTGGTGAAGGATGTCATTGTGCCCTATTCTCACCGGATTAATACTTATAATGGTGATATCAGTGTCGAAAATCGCAACACCTTGCTGTTCTTCATGGGCAATCGATTTCGCAAGGAGGGGGGAAAGATCCGAGATTTGCTTTTCCAATTGCTTGAAAATGAAGAGGATGTCATAGTGAAACATGGAACCCAATCCAGGGAGAGTCGACGGGCCGCTACACATGGGATGCATACATCTAAGTTCTGTTTGAATCCTGCTGGTGATACTCCATCAGCTTGCCGGCTTTTTGACTCTATAGTTAGTTTGTGTGTCCCTGTGGTAATCAGTGATAGTATTGAGCTGCCATTTGAAGATGTTATAGACTACAGGAAGATAGCCATATTTGTTGAATCGAATACAGCTTTGAAGCCGGGATTCCTGGTCTCAATGCTAAGAGAAATTTCCAGTGAGAGAATCCTTGAATATCAGAAAGAGATGAATGAGGTGAAGCATTATTTTCAATATGGAGTACCAAATGGAACTGTGAATGAGATATGGCGCCATATTGCACAGAAGCTTCCCTTTATCAAGTTGTCGATCAACCGTGACAAACGCCTTGTAAAGAGGGATATGAATGTGCCAGACTGCTCTTGTGTCTGCTCAAACCAGACTGGGATTATAACCAGCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009832 GO:0009834 GO:0009987 GO:0010383 GO:0010393 GO:0010410 GO:0010413 GO:0010417 GO:0012505 GO:0015020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016763 GO:0017144 GO:0031221 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0035884 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045488 GO:0045489 GO:0045491 GO:0045492 GO:0047517 GO:0070589 GO:0070592 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0080116 GO:0097708 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exostosin

Protein Analysis

493

Amino Acids

55.61

Weight (kDa)

6.87

Isoelectric Point (pI)

44.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exostosin_GT47	PF03016	103 - 413	1.9e-76	Exostosin GT47 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35100
fragaria_vesca	FvH4_3g12450 FvH4_3g12450
malus_domestica	MD05G1250200.v1.1 MD10G1231200.v1.1
prunus_persica	Prupe.4G113400_v2.0.a1
pyrus_communis	pycom03g23690 pycom05g22820 pycom10g19440
rosa_chinensis	RchiOBHm_Chr5g0020381
rosa_laevigata	RLG00000032518
rosa_multiflora	Rmu_sc0002087.1_g000001 Rmu_sc0007157.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057880
rosa_rugosa	Rorug05G0058900
rosa_samantha	Rh5AG149100 Rh5BG148800 Rh5CG160400 Rh5DG147500
rosa_wichuraiana	Rw5G013220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	858, 1469
Acc65I	GGTACC	1 cut(s)	450
AccB1I	GGYRCC	2 cut(s)	450, 1347
AccB7I	CCANNNNNTGG	1 cut(s)	439
AccBSI	CCGCTC	1 cut(s)	487
AccI	GTMKAC	1 cut(s)	1015
AccII	CGCG	4 cut(s)	273, 343, 384, 696
AccIII	TCCGGA	1 cut(s)	520
AclWI	GGATC	6 cut(s)	18, 512, 525, 607, 713, 931
AcoI	YGGCCR	3 cut(s)	388, 427, 594
AcsI	RAATTY	1 cut(s)	1248
AcyI	GRCGYC	2 cut(s)	249, 1348
AfaI	GTAC	7 cut(s)	323, 422, 452, 620, 674, 734, 1320
AfiI	CCNNNNNNNGG	6 cut(s)	103, 439, 460, 592, 1005, 1006
AflIII	ACRYGT	1 cut(s)	405
AgsI	TTSAA	8 cut(s)	460, 965, 1060, 1160, 1199, 1216, 1271, 1310
AhdI	GACNNNNNGTC	3 cut(s)	406, 409, 805
AjiI	CACGTC	1 cut(s)	406
AjnI	CCWGG	4 cut(s)	636, 801, 1004, 1227
AluBI	AGCT	6 cut(s)	16, 567, 1085, 1150, 1211, 1366
AluI	AGCT	6 cut(s)	16, 567, 1085, 1150, 1211, 1366
Alw21I	GWGCWC	1 cut(s)	8
Alw26I	GTCTC	2 cut(s)	208, 1237
AlwI	GGATC	6 cut(s)	18, 512, 525, 607, 713, 931
Aor13HI	TCCGGA	1 cut(s)	520
AoxI	GGCC	7 cut(s)	105, 388, 427, 594, 611, 711, 1020
ApeKI	GCWGC	3 cut(s)	16, 367, 1150
ApoI	RAATTY	1 cut(s)	1248
AseI	ATTAAT	1 cut(s)	849
Asp718I	GGTACC	1 cut(s)	450
AspLEI	GCGC	4 cut(s)	52, 646, 667, 1350
AspS9I	GGNCC	4 cut(s)	106, 463, 799, 1020
AsuC2I	CCSGG	2 cut(s)	426, 1221
AsuHPI	GGTGA	6 cut(s)	340, 826, 833, 875, 1082, 1306
AvaII	GGWCC	2 cut(s)	463, 799
BaeGI	GKGCMC	1 cut(s)	834
BamHI	GGATCC	1 cut(s)	517
BanI	GGYRCC	2 cut(s)	450, 1347
Bbv12I	GWGCWC	1 cut(s)	8
BbvCI	CCTCAGC	1 cut(s)	188
BbvI	GCAGC	3 cut(s)	3, 379, 1137
BccI	CCATC	1 cut(s)	1087
BceAI	ACGGC	5 cut(s)	37, 185, 370, 532, 598
BcgI	CGANNNNNNTGC	1 cut(s)	32
BciT130I	CCWGG	4 cut(s)	638, 803, 1006, 1229
BclI	TGATCA	1 cut(s)	705
BcnI	CCSGG	2 cut(s)	426, 1221
BcoDI	GTCTC	2 cut(s)	208, 1237
BfmI	CTRYAG	2 cut(s)	1104, 1174
BfoI	RGCGCY	3 cut(s)	53, 647, 1351
BisI	GCNGC	9 cut(s)	17, 198, 368, 385, 388, 594, 788, 1023, 1151
BlsI	GCNGC	9 cut(s)	18, 199, 369, 386, 389, 595, 789, 1024, 1152
BmcAI	AGTACT	1 cut(s)	674
Bme1390I	CCNGG	6 cut(s)	426, 638, 803, 1006, 1221, 1229
Bme18I	GGWCC	2 cut(s)	463, 799
BmeRI	GACNNNNNGTC	3 cut(s)	406, 409, 805
BmgBI	CACGTC	1 cut(s)	406
BmgT120I	GGNCC	4 cut(s)	106, 463, 799, 1020
BmiI	GGNNCC	4 cut(s)	452, 519, 997, 1349
BmrFI	CCNGG	6 cut(s)	426, 638, 803, 1006, 1221, 1229
BmrI	ACTGGG	1 cut(s)	1470
BmsI	GCATC	2 cut(s)	366, 1026
BmuI	ACTGGG	1 cut(s)	1470
BplI	GAGNNNNNCTC	2 cut(s)	356, 388
BpmI	CTGGAG	1 cut(s)	680
Bpu10I	CCTNAGC	1 cut(s)	188
BpuEI	CTTGAG	4 cut(s)	401, 455, 583, 776
BpuMI	CCSGG	2 cut(s)	426, 1221
Bsa29I	ATCGAT	1 cut(s)	913
BsaAI	YACGTR	1 cut(s)	544
BsaHI	GRCGYC	2 cut(s)	249, 1348
BsaI	GGTCTC	1 cut(s)	1237
BsaJI	CCNNGG	5 cut(s)	102, 382, 424, 802, 1005
BsaWI	WCCGGW	2 cut(s)	520, 843
BsaXI	ACNNNNNCTCC	2 cut(s)	599, 629
Bsc4I	CCNNNNNNNGG	6 cut(s)	103, 439, 460, 592, 1005, 1006
Bse118I	RCCGGY	3 cut(s)	499, 585, 1089
Bse1I	ACTGG	3 cut(s)	680, 1254, 1465
BseAI	TCCGGA	1 cut(s)	520
BseBI	CCWGG	4 cut(s)	638, 803, 1006, 1229
BseCI	ATCGAT	1 cut(s)	913
BseDI	CCNNGG	5 cut(s)	102, 382, 424, 802, 1005
BseGI	GGATG	3 cut(s)	826, 982, 1041
BseLI	CCNNNNNNNGG	6 cut(s)	103, 439, 460, 592, 1005, 1006
BseMII	CTCAG	1 cut(s)	202
BseNI	ACTGG	3 cut(s)	680, 1254, 1465
BseRI	GAGGAG	9 cut(s)	152, 217, 220, 223, 226, 458, 547, 620, 644
BseSI	GKGCMC	1 cut(s)	834
BseX3I	CGGCCG	1 cut(s)	594
BseXI	GCAGC	3 cut(s)	3, 379, 1137
Bsh1236I	CGCG	4 cut(s)	273, 343, 384, 696
Bsh1285I	CGRYCG	1 cut(s)	597
BshFI	GGCC	7 cut(s)	107, 390, 429, 596, 613, 713, 1022
BshNI	GGYRCC	2 cut(s)	450, 1347
BshVI	ATCGAT	1 cut(s)	913
BsiEI	CGRYCG	1 cut(s)	597
BsiHKAI	GWGCWC	1 cut(s)	8
BsiSI	CCGG	8 cut(s)	426, 500, 521, 586, 597, 844, 1090, 1220
BslFI	GGGAC	1 cut(s)	1106
BslI	CCNNNNNNNGG	6 cut(s)	103, 439, 460, 592, 1005, 1006
BsmAI	GTCTC	2 cut(s)	208, 1237
BsmBI	CGTCTC	1 cut(s)	208
BsmFI	GGGAC	1 cut(s)	1106
BsnI	GGCC	7 cut(s)	107, 390, 429, 596, 613, 713, 1022
Bso31I	GGTCTC	1 cut(s)	1237
Bsp1286I	GDGCHC	2 cut(s)	8, 834
Bsp13I	TCCGGA	1 cut(s)	520
Bsp1407I	TGTACA	1 cut(s)	732
Bsp143I	GATC	8 cut(s)	23, 517, 570, 599, 705, 718, 936, 1386
Bsp19I	CCATGG	1 cut(s)	102
BspANI	GGCC	7 cut(s)	107, 390, 429, 596, 613, 713, 1022
BspCNI	CTCAG	2 cut(s)	4, 201
BspDI	ATCGAT	1 cut(s)	913
BspEI	TCCGGA	1 cut(s)	520
BspFNI	CGCG	4 cut(s)	273, 343, 384, 696
BspLI	GGNNCC	4 cut(s)	452, 519, 997, 1349
BspPI	GGATC	6 cut(s)	18, 512, 525, 607, 713, 931
BspT107I	GGYRCC	2 cut(s)	450, 1347
BspTNI	GGTCTC	1 cut(s)	1237
BsrBI	CCGCTC	1 cut(s)	487
BsrFI	RCCGGY	3 cut(s)	499, 585, 1089
BsrGI	TGTACA	1 cut(s)	732
BsrI	ACTGG	3 cut(s)	680, 1254, 1465
BssAI	RCCGGY	3 cut(s)	499, 585, 1089
BssECI	CCNNGG	5 cut(s)	102, 382, 424, 802, 1005
BssMI	GATC	8 cut(s)	23, 517, 570, 599, 705, 718, 936, 1386
BssNI	GRCGYC	2 cut(s)	249, 1348
BssT1I	CCWWGG	1 cut(s)	102
Bst2UI	CCWGG	4 cut(s)	638, 803, 1006, 1229
Bst4CI	ACNGT	3 cut(s)	145, 1333, 1394
Bst6I	CTCTTC	3 cut(s)	155, 461, 966
BstACI	GRCGYC	2 cut(s)	249, 1348
BstAUI	TGTACA	1 cut(s)	732
BstBAI	YACGTR	1 cut(s)	544
BstC8I	GCNNGC	7 cut(s)	109, 132, 378, 382, 591, 1087, 1091
BstDEI	CTNAG	4 cut(s)	12, 188, 1047, 1241
BstDSI	CCRYGG	2 cut(s)	102, 382
BstENI	CCTNNNNNAGG	1 cut(s)	458
BstF5I	GGATG	3 cut(s)	826, 982, 1041
BstFNI	CGCG	4 cut(s)	273, 343, 384, 696
BstH2I	RGCGCY	3 cut(s)	53, 647, 1351
BstHHI	GCGC	4 cut(s)	52, 646, 667, 1350
BstKTI	GATC	8 cut(s)	26, 520, 573, 602, 708, 721, 939, 1389
BstMAI	GTCTC	2 cut(s)	208, 1237
BstMBI	GATC	8 cut(s)	23, 517, 570, 599, 705, 718, 936, 1386
BstMCI	CGRYCG	1 cut(s)	597
BstMWI	GCNNNNNNNGC	3 cut(s)	49, 373, 664
BstNI	CCWGG	4 cut(s)	638, 803, 1006, 1229
BstSCI	CCNGG	6 cut(s)	424, 636, 801, 1004, 1219, 1227
BstSFI	CTRYAG	2 cut(s)	1104, 1174
BstSLI	GKGCMC	1 cut(s)	834
BstUI	CGCG	4 cut(s)	273, 343, 384, 696
BstV1I	GCAGC	3 cut(s)	3, 379, 1137
BstX2I	RGATCY	2 cut(s)	517, 936
BstYI	RGATCY	2 cut(s)	517, 936
BstZI	CGGCCG	1 cut(s)	594
Bsu15I	ATCGAT	1 cut(s)	913
BsuRI	GGCC	7 cut(s)	107, 390, 429, 596, 613, 713, 1022
BsuTUI	ATCGAT	1 cut(s)	913
BtgI	CCRYGG	2 cut(s)	102, 382
BtrI	CACGTC	1 cut(s)	406
BtsCI	GGATG	3 cut(s)	826, 982, 1041
BtsIMutI	CAGTG	3 cut(s)	877, 1141, 1261
Cac8I	GCNNGC	7 cut(s)	109, 132, 378, 382, 591, 1087, 1091
CfoI	GCGC	4 cut(s)	52, 646, 667, 1350
Cfr10I	RCCGGY	3 cut(s)	499, 585, 1089
Cfr13I	GGNCC	4 cut(s)	106, 463, 799, 1020
Cfr42I	CCGCGG	1 cut(s)	385
ClaI	ATCGAT	1 cut(s)	913
CseI	GACGC	3 cut(s)	257, 349, 702
CsiI	ACCWGGT	1 cut(s)	636
Csp6I	GTAC	7 cut(s)	322, 421, 451, 619, 673, 733, 1319
CviAII	CATG	7 cut(s)	103, 439, 701, 709, 904, 992, 1031
CviQI	GTAC	7 cut(s)	322, 421, 451, 619, 673, 733, 1319
DdeI	CTNAG	4 cut(s)	12, 188, 1047, 1241
DinI	GGCGCC	1 cut(s)	1349
DpnI	GATC	8 cut(s)	25, 519, 572, 601, 707, 720, 938, 1388
DpnII	GATC	8 cut(s)	23, 517, 570, 599, 705, 718, 936, 1386
DriI	GACNNNNNGTC	3 cut(s)	406, 409, 805
EaeI	YGGCCR	3 cut(s)	388, 427, 594
EagI	CGGCCG	1 cut(s)	594
Eam1104I	CTCTTC	3 cut(s)	155, 461, 966
Eam1105I	GACNNNNNGTC	3 cut(s)	406, 409, 805
EarI	CTCTTC	3 cut(s)	155, 461, 966
EciI	GGCGGA	2 cut(s)	545, 812
EclXI	CGGCCG	1 cut(s)	594
Eco130I	CCWWGG	1 cut(s)	102
Eco31I	GGTCTC	1 cut(s)	1237
Eco32I	GATATC	1 cut(s)	868
Eco47I	GGWCC	2 cut(s)	463, 799
Eco52I	CGGCCG	1 cut(s)	594
EcoNI	CCTNNNNNAGG	1 cut(s)	458
EcoO109I	RGGNCCY	1 cut(s)	463
EcoRII	CCWGG	4 cut(s)	636, 801, 1004, 1227
EcoRV	GATATC	1 cut(s)	868
EcoT14I	CCWWGG	1 cut(s)	102
EcoT22I	ATGCAT	1 cut(s)	1041
EgeI	GGCGCC	1 cut(s)	1349
EheI	GGCGCC	1 cut(s)	1349
ErhI	CCWWGG	1 cut(s)	102
Esp3I	CGTCTC	1 cut(s)	208
FaeI	CATG	7 cut(s)	106, 442, 704, 712, 907, 995, 1034
FalI	AAGNNNNNCTT	2 cut(s)	1355, 1387
FaqI	GGGAC	1 cut(s)	1106
FatI	CATG	7 cut(s)	102, 438, 700, 708, 903, 991, 1030
FauI	CCCGC	7 cut(s)	116, 202, 217, 278, 389, 403, 480
FbaI	TGATCA	1 cut(s)	705
FblI	GTMKAC	1 cut(s)	1015
Fnu4HI	GCNGC	9 cut(s)	17, 198, 368, 385, 388, 594, 788, 1023, 1151
FokI	GGATG	3 cut(s)	833, 989, 1048
Fsp4HI	GCNGC	9 cut(s)	17, 198, 368, 385, 388, 594, 788, 1023, 1151
GlaI	GCGC	4 cut(s)	51, 645, 666, 1349
GluI	GCNGC	9 cut(s)	17, 198, 368, 385, 388, 594, 788, 1023, 1151
GsuI	CTGGAG	1 cut(s)	680
HaeII	RGCGCY	3 cut(s)	53, 647, 1351
HaeIII	GGCC	7 cut(s)	107, 390, 429, 596, 613, 713, 1022
HapII	CCGG	8 cut(s)	426, 500, 521, 586, 597, 844, 1090, 1220
HgaI	GACGC	3 cut(s)	257, 349, 702
HhaI	GCGC	4 cut(s)	52, 646, 667, 1350
Hin1I	GRCGYC	2 cut(s)	249, 1348
Hin1II	CATG	7 cut(s)	106, 442, 704, 712, 907, 995, 1034
Hin6I	GCGC	4 cut(s)	50, 644, 665, 1348
HinP1I	GCGC	4 cut(s)	50, 644, 665, 1348
HincII	GTYRAC	2 cut(s)	577, 1016
HindII	GTYRAC	2 cut(s)	577, 1016
HindIII	AAGCTT	1 cut(s)	1364
HinfI	GANTC	8 cut(s)	93, 479, 1012, 1060, 1100, 1199, 1224, 1263
HpaII	CCGG	8 cut(s)	426, 500, 521, 586, 597, 844, 1090, 1220
HphI	GGTGA	6 cut(s)	340, 826, 833, 875, 1082, 1306
Hpy166II	GTNNAC	4 cut(s)	322, 348, 577, 1016
Hpy188I	TCNGA	7 cut(s)	23, 61, 484, 604, 718, 941, 1278
Hpy188III	TCNNGA	2 cut(s)	337, 521
Hpy8I	GTNNAC	4 cut(s)	322, 348, 577, 1016
HpyAV	CCTTC	4 cut(s)	193, 232, 262, 811
HpyCH4III	ACNGT	3 cut(s)	145, 1333, 1394
HpyCH4IV	ACGT	3 cut(s)	261, 405, 543
HpyCH4V	TGCA	3 cut(s)	761, 1039, 1358
HpyF10VI	GCNNNNNNNGC	3 cut(s)	49, 373, 664
HpyF3I	CTNAG	4 cut(s)	12, 188, 1047, 1241
HpySE526I	ACGT	3 cut(s)	261, 405, 543
Hsp92I	GRCGYC	2 cut(s)	249, 1348
Hsp92II	CATG	7 cut(s)	106, 442, 704, 712, 907, 995, 1034
HspAI	GCGC	4 cut(s)	50, 644, 665, 1348
KasI	GGCGCC	1 cut(s)	1347
Kpn2I	TCCGGA	1 cut(s)	520
KpnI	GGTACC	1 cut(s)	454
KroI	GCCGGC	1 cut(s)	1089
KroNI	GCCGGC	1 cut(s)	1091
Ksp22I	TGATCA	1 cut(s)	705
KspI	CCGCGG	1 cut(s)	385
Kzo9I	GATC	8 cut(s)	23, 517, 570, 599, 705, 718, 936, 1386
LmnI	GCTCC	2 cut(s)	24, 484
Lsp1109I	GCAGC	3 cut(s)	3, 379, 1137
LweI	GCATC	2 cut(s)	366, 1026
MabI	ACCWGGT	1 cut(s)	636
MaeII	ACGT	3 cut(s)	261, 405, 543
MaeIII	GTNAC	1 cut(s)	1394
MalI	GATC	8 cut(s)	25, 519, 572, 601, 707, 720, 938, 1388
MbiI	CCGCTC	1 cut(s)	487
MboI	GATC	8 cut(s)	23, 517, 570, 599, 705, 718, 936, 1386
MboII	GAAGA	7 cut(s)	142, 448, 544, 892, 983, 1172, 1192
MfeI	CAATTG	1 cut(s)	956
MflI	RGATCY	2 cut(s)	517, 936
MhlI	GDGCHC	2 cut(s)	8, 834
MluCI	AATT	4 cut(s)	286, 292, 956, 1248
Mly113I	GGCGCC	1 cut(s)	1348
MlyI	GAGTC	2 cut(s)	1021, 1094
MmeI	TCCRAC	2 cut(s)	51, 321
Mph1103I	ATGCAT	1 cut(s)	1041
MroI	TCCGGA	1 cut(s)	520
MroNI	GCCGGC	1 cut(s)	1089
MseI	TTAA	1 cut(s)	849
MspA1I	CMGCKG	1 cut(s)	384
MspI	CCGG	8 cut(s)	426, 500, 521, 586, 597, 844, 1090, 1220
MspR9I	CCNGG	6 cut(s)	426, 638, 803, 1006, 1221, 1229
MunI	CAATTG	1 cut(s)	956
MvaI	CCWGG	4 cut(s)	638, 803, 1006, 1229
MvnI	CGCG	4 cut(s)	273, 343, 384, 696
MwoI	GCNNNNNNNGC	3 cut(s)	49, 373, 664
NaeI	GCCGGC	1 cut(s)	1091
NarI	GGCGCC	1 cut(s)	1348
NciI	CCSGG	2 cut(s)	426, 1221
NcoI	CCATGG	1 cut(s)	102
NdeII	GATC	8 cut(s)	23, 517, 570, 599, 705, 718, 936, 1386
NgoMIV	GCCGGC	1 cut(s)	1089
NlaIII	CATG	7 cut(s)	106, 442, 704, 712, 907, 995, 1034
NlaIV	GGNNCC	4 cut(s)	452, 519, 997, 1349
NmuCI	GTSAC	1 cut(s)	1394
NsiI	ATGCAT	1 cut(s)	1041
PcsI	WCGNNNNNNNCGW	2 cut(s)	270, 360
PdiI	GCCGGC	1 cut(s)	1091
PfeI	GAWTC	6 cut(s)	93, 479, 1060, 1199, 1224, 1263
PflMI	CCANNNNNTGG	1 cut(s)	439
PkrI	GCNGC	9 cut(s)	18, 199, 369, 386, 389, 595, 789, 1024, 1152
PleI	GAGTC	2 cut(s)	1020, 1094
PluTI	GGCGCC	1 cut(s)	1351
PpsI	GAGTC	2 cut(s)	1020, 1094
Ppu21I	YACGTR	1 cut(s)	544
PpuMI	RGGWCCY	1 cut(s)	463
PshBI	ATTAAT	1 cut(s)	849
PsiI	TTATAA	2 cut(s)	858, 1469
Psp5II	RGGWCCY	1 cut(s)	463
Psp6I	CCWGG	4 cut(s)	636, 801, 1004, 1227
PspGI	CCWGG	4 cut(s)	636, 801, 1004, 1227
PspN4I	GGNNCC	4 cut(s)	452, 519, 997, 1349
PspPI	GGNCC	4 cut(s)	106, 463, 799, 1020
PspPPI	RGGWCCY	1 cut(s)	463
PsuI	RGATCY	2 cut(s)	517, 936
RsaI	GTAC	7 cut(s)	323, 422, 452, 620, 674, 734, 1320
RsaNI	GTAC	7 cut(s)	322, 421, 451, 619, 673, 733, 1319
SacII	CCGCGG	1 cut(s)	385
SalI	GTCGAC	1 cut(s)	1014
SaqAI	TTAA	1 cut(s)	849
SatI	GCNGC	9 cut(s)	17, 198, 368, 385, 388, 594, 788, 1023, 1151
Sau3AI	GATC	8 cut(s)	23, 517, 570, 599, 705, 718, 936, 1386
Sau96I	GGNCC	4 cut(s)	106, 463, 799, 1020
ScaI	AGTACT	1 cut(s)	674
SchI	GAGTC	2 cut(s)	1021, 1094
ScrFI	CCNGG	6 cut(s)	426, 638, 803, 1006, 1221, 1229
SduI	GDGCHC	2 cut(s)	8, 834
SexAI	ACCWGGT	1 cut(s)	636
SfaNI	GCATC	2 cut(s)	366, 1026
SfcI	CTRYAG	2 cut(s)	1104, 1174
SfoI	GGCGCC	1 cut(s)	1349
Sfr303I	CCGCGG	1 cut(s)	385
SgrAI	CRCCGGYG	1 cut(s)	499
SgrBI	CCGCGG	1 cut(s)	385
SinI	GGWCC	2 cut(s)	463, 799
SmlI	CTYRAG	4 cut(s)	416, 470, 562, 791
SmoI	CTYRAG	4 cut(s)	416, 470, 562, 791
Sse9I	AATT	4 cut(s)	286, 292, 956, 1248
SspDI	GGCGCC	1 cut(s)	1347
StyD4I	CCNGG	6 cut(s)	424, 636, 801, 1004, 1219, 1227
StyI	CCWWGG	1 cut(s)	102
TaaI	ACNGT	3 cut(s)	145, 1333, 1394
TaiI	ACGT	3 cut(s)	264, 408, 546
TaqI	TCGA	6 cut(s)	363, 876, 913, 1015, 1202, 1385
TasI	AATT	4 cut(s)	286, 292, 956, 1248
TatI	WGTACW	2 cut(s)	672, 732
TauI	GCSGC	6 cut(s)	200, 387, 390, 596, 790, 1025
TfiI	GAWTC	6 cut(s)	93, 479, 1060, 1199, 1224, 1263
Tru1I	TTAA	1 cut(s)	849
Tru9I	TTAA	1 cut(s)	849
TscAI	CASTG	3 cut(s)	877, 1141, 1261
TseFI	GTSAC	1 cut(s)	1394
TseI	GCWGC	3 cut(s)	16, 367, 1150
Tsp45I	GTSAC	1 cut(s)	1394
TspDTI	ATGAA	5 cut(s)	244, 892, 984, 1301, 1436
TspRI	CASTG	3 cut(s)	877, 1141, 1261
Van91I	CCANNNNNTGG	1 cut(s)	439
VpaK11BI	GGWCC	2 cut(s)	463, 799
VspI	ATTAAT	1 cut(s)	849
XagI	CCTNNNNNAGG	1 cut(s)	458
XapI	RAATTY	1 cut(s)	1248
XmiI	GTMKAC	1 cut(s)	1015
ZrmI	AGTACT	1 cut(s)	674
Zsp2I	ATGCAT	1 cut(s)	1041

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.