RchiOBHm_Chr5g0026971

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0011913
Physical Location & Seq
Reverse (-)
20926042 .. 20928180
2139 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30653

Sequence Viewer

Length: 1284 bp
ATGGCCTCCGCTTGCGTCAACAACATCGGCATGTCGCCGGAGAATTTCGCGCCGGCGACCTACCCCTCCTACGGCTGGCTCAGCCCGAGAGTCTCCTTCAGCTGCGATAACACCGGCGATGGTGGCCGGCTTCCCGGAGCTAAGTCCTCTTCTGCGGCGAAGAATCAACCGGAAGGTCCAGATCCGGAGCTTTCTGGAGGAGAGTTCGAGTTCCGGCTGGAAGATCCGGTCGCCATGCTGACCGCCGATGAGCTCTTCTCCGGCGGGAAGCTCATGCCGCTCCACATCTTCTCCGTCAAACCTCCCGTCAACGAGCCCTCGTCTTCCGAGATCAGATCGCCGGAGACGACTAAGTACCGCCGGAGACAGGAGATTTCTGTTTCTGACCCGTACGTGTTCTCTCCCAAAGCTCCGAGGTGCTCGAGCCGTTGGAGAGAGCTATTGGGATTGAAGAAGCTGTACCAGAATTCCTCCAACGGTAACGGTAACGGCGGCGCGAAGGCCGAGGCCAGTCAGAAAACGACGTCGTGCAGCACCTCCGCAAACGCGGCGCCCAAATCACTGAAGCACTTCCTTCACAGAAGCTCGAAATCGTCGTCGTCGTCATCCTCCGACGCCTCGCTGAGCTTGCCTCTGCTCAAAGACTCCGACTGCGAGTCCGTCTCCATCTCCTCGCGCCTCTCGCTCTCGTCCTCGTCCTCGGGGCACGAGCACGACGACCTGCCCCGGCTCTCCCTCGATTCGGACAAACCGAATCCGAACCCGAACCCGAATCCGATGTTCTCCCTCCACCGCAAACCGGCGCGGGCCAAAACGGCCATCAAGATTCGAGAAATCAAGCAGAGAGCGGCGGCGGCGGATCAGGCGGCGAGGGTGGGAAGGAGCCCGATGAGGAGGCCGGCGGCTACGGCTGAACCCGCCACCGTGGCGACCAGCAGAGGCGTCTCGGTGGATAGCCCGAGAATGAACTCGTCGGGGAAAATAGTGTTCCAAAGCTTAGAGCGGAGCTCGAGCAGTCCAAGCAGCTTCAACGGTGGGCCCCGGCTGAAGCACAGAGGAATGGAGCGGTCGTACTCAGCCAACGTCAGAGTGACTCCGGTTCTGAACGTCCCGGTCTGCTCCCTCCGGGGCTCCTCCAAATCCGGGTTCGGATTCGGGCAGCTATTCTCTTCTCCTCAGAAACGAGACTCAAACGGCGCAGTTTCCGGGAAAGGCGGCCAGCACAGCCATTACGTTCAACAGAGTCAGAGTCATAACAACAAGAACCGGGCAGACCGTAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

427

Amino Acids

45.71

Weight (kDa)

9.91

Isoelectric Point (pI)

65.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011913)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56020 AT1G79060 AT3G12970
fragaria_vesca FvH4_3g16010
malus_domestica MD05G1215900.v1.1 MD10G1198500.v1.1
prunus_persica Prupe.4G143300_v2.0.a1
pyrus_communis pycom05g19860 pycom10g17120
rosa_chinensis RchiOBHm_Chr5g0026971
rosa_laevigata RLG00000032974
rosa_multiflora Rmu_sc0002742.1_g000001
rosa_roxburghii Rroxscaffold_1G00052510
rosa_rugosa Rorug05G0096400
rosa_samantha Rh5AG189800 Rh5BG187300 Rh5CG207000 Rh5DG189000
rosa_wichuraiana Rw5G017270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 527
Acc36I ACCTGC 1 cut(s) 729
AccB1I GGYRCC 1 cut(s) 550
AccBSI CCGCTC 4 cut(s) 280, 848, 1003, 1066
AccII CGCG 5 cut(s) 50, 497, 548, 676, 805
AccIII TCCGGA 1 cut(s) 184
AclWI GGATC 3 cut(s) 176, 218, 867
AcoI YGGCCR 3 cut(s) 124, 816, 1216
AcsI RAATTY 2 cut(s) 43, 466
AcuI CTGAAG 3 cut(s) 82, 584, 1067
AcyI GRCGYC 4 cut(s) 524, 551, 615, 942
AfaI GTAC 4 cut(s) 356, 392, 461, 1073
AfiI CCNNNNNNNGG 6 cut(s) 71, 75, 367, 742, 799, 1143
AflIII ACRYGT 1 cut(s) 393
AgsI TTSAA 3 cut(s) 451, 1030, 1238
AhdI GACNNNNNGTC 1 cut(s) 655
AjuI GAANNNNNNNTTGG 2 cut(s) 1130, 1162
Alw21I GWGCWC 4 cut(s) 255, 422, 714, 1010
Alw26I GTCTC 6 cut(s) 97, 338, 358, 667, 949, 1179
AlwI GGATC 3 cut(s) 176, 218, 867
Ama87I CYCGRG 5 cut(s) 85, 421, 700, 958, 1009
Aor13HI TCCGGA 1 cut(s) 184
AoxI GGCC 9 cut(s) 3, 124, 501, 507, 807, 816, 896, 1037, 1216
ApaI GGGCCC 1 cut(s) 1041
ApeKI GCWGC 4 cut(s) 102, 531, 1023, 1159
ApoI RAATTY 2 cut(s) 43, 466
ArsI GACNNNNNNTTYG 4 cut(s) 291, 323, 581, 613
Asp700I GAANNNNTTC 1 cut(s) 569
AspLEI GCGC 6 cut(s) 52, 497, 553, 678, 805, 1199
AspS9I GGNCC 4 cut(s) 176, 807, 1037, 1038
AsuC2I CCSGG 8 cut(s) 135, 727, 1042, 1112, 1127, 1144, 1207, 1268
AvaI CYCGRG 5 cut(s) 85, 421, 700, 958, 1009
AvaII GGWCC 1 cut(s) 176
BaeGI GKGCMC 2 cut(s) 708, 1041
BanI GGYRCC 1 cut(s) 550
BanII GRGCYC 6 cut(s) 255, 318, 887, 1010, 1041, 1133
BarI GAAGNNNNNNTAC 2 cut(s) 443, 475
BauI CACGAG 1 cut(s) 707
BbsI GAAGAC 1 cut(s) 315
Bbv12I GWGCWC 4 cut(s) 255, 422, 714, 1010
BbvI GCAGC 4 cut(s) 89, 543, 1035, 1171
BccI CCATC 3 cut(s) 113, 674, 827
BceAI ACGGC 6 cut(s) 88, 411, 505, 831, 924, 1210
BcnI CCSGG 8 cut(s) 135, 727, 1042, 1112, 1127, 1144, 1207, 1268
BcoDI GTCTC 6 cut(s) 97, 338, 358, 667, 949, 1179
BfoI RGCGCY 1 cut(s) 554
BfuAI ACCTGC 1 cut(s) 729
BglI GCCNNNNNGGC 2 cut(s) 815, 926
BlpI GCTNAGC 2 cut(s) 80, 623
Bme1390I CCNGG 8 cut(s) 135, 727, 1042, 1112, 1127, 1144, 1207, 1268
Bme18I GGWCC 1 cut(s) 176
BmeRI GACNNNNNGTC 1 cut(s) 655
BmeT110I CYCGRG 5 cut(s) 85, 421, 700, 958, 1009
BmgT120I GGNCC 4 cut(s) 176, 807, 1037, 1038
BmiI GGNNCC 5 cut(s) 552, 884, 1039, 1040, 1132
BmrFI CCNGG 8 cut(s) 135, 727, 1042, 1112, 1127, 1144, 1207, 1268
BpiI GAAGAC 1 cut(s) 315
BplI GAGNNNNNCTC 8 cut(s) 242, 274, 616, 648, 647, 679, 992, 1024
BpmI CTGGAG 1 cut(s) 216
Bpu1102I GCTNAGC 2 cut(s) 80, 623
BpuMI CCSGG 8 cut(s) 135, 727, 1042, 1112, 1127, 1144, 1207, 1268
BsaAI YACGTR 1 cut(s) 394
BsaHI GRCGYC 4 cut(s) 524, 551, 615, 942
BsaJI CCNNGG 7 cut(s) 413, 504, 699, 725, 924, 1040, 1126
BsaWI WCCGGW 4 cut(s) 169, 184, 226, 1096
BsaXI ACNNNNNCTCC 4 cut(s) 275, 305, 1055, 1085
Bsc4I CCNNNNNNNGG 6 cut(s) 71, 75, 367, 742, 799, 1143
Bse118I RCCGGY 5 cut(s) 52, 113, 126, 799, 898
Bse1I ACTGG 1 cut(s) 510
BseAI TCCGGA 1 cut(s) 184
BseDI CCNNGG 7 cut(s) 413, 504, 699, 725, 924, 1040, 1126
BseGI GGATG 1 cut(s) 605
BseLI CCNNNNNNNGG 6 cut(s) 71, 75, 367, 742, 799, 1143
BseMII CTCAG 4 cut(s) 94, 614, 1089, 1190
BseNI ACTGG 1 cut(s) 510
BseRI GAGGAG 5 cut(s) 213, 661, 907, 1123, 1164
BseSI GKGCMC 2 cut(s) 708, 1041
BseXI GCAGC 4 cut(s) 89, 543, 1035, 1171
BsgI GTGCAG 1 cut(s) 550
Bsh1236I CGCG 5 cut(s) 50, 497, 548, 676, 805
Bsh1285I CGRYCG 2 cut(s) 231, 1070
BshFI GGCC 9 cut(s) 5, 126, 503, 509, 809, 818, 898, 1039, 1218
BshNI GGYRCC 1 cut(s) 550
BsiEI CGRYCG 2 cut(s) 231, 1070
BsiHKAI GWGCWC 4 cut(s) 255, 422, 714, 1010
BsiHKCI CYCGRG 5 cut(s) 85, 421, 700, 958, 1009
BsiWI CGTACG 1 cut(s) 390
BslFI GGGAC 1 cut(s) 1094
BslI CCNNNNNNNGG 6 cut(s) 71, 75, 367, 742, 799, 1143
BsmAI GTCTC 6 cut(s) 97, 338, 358, 667, 949, 1179
BsmBI CGTCTC 3 cut(s) 338, 667, 949
BsmFI GGGAC 1 cut(s) 1094
BsnI GGCC 9 cut(s) 5, 126, 503, 509, 809, 818, 898, 1039, 1218
BsoBI CYCGRG 5 cut(s) 85, 421, 700, 958, 1009
Bsp120I GGGCCC 1 cut(s) 1037
Bsp1286I GDGCHC 9 cut(s) 255, 318, 422, 708, 714, 887, 1010, 1041, 1133
Bsp13I TCCGGA 1 cut(s) 184
Bsp143I GATC 5 cut(s) 181, 223, 330, 335, 859
Bsp1720I GCTNAGC 2 cut(s) 80, 623
BspANI GGCC 9 cut(s) 5, 126, 503, 509, 809, 818, 898, 1039, 1218
BspCNI CTCAG 4 cut(s) 93, 615, 1088, 1189
BspEI TCCGGA 1 cut(s) 184
BspFNI CGCG 5 cut(s) 50, 497, 548, 676, 805
BspLI GGNNCC 5 cut(s) 552, 884, 1039, 1040, 1132
BspMI ACCTGC 1 cut(s) 729
BspPI GGATC 3 cut(s) 176, 218, 867
BspQI GCTCTTC 1 cut(s) 260
BspT107I GGYRCC 1 cut(s) 550
BsrBI CCGCTC 4 cut(s) 280, 848, 1003, 1066
BsrFI RCCGGY 5 cut(s) 52, 113, 126, 799, 898
BsrI ACTGG 1 cut(s) 510
BssAI RCCGGY 5 cut(s) 52, 113, 126, 799, 898
BssECI CCNNGG 7 cut(s) 413, 504, 699, 725, 924, 1040, 1126
BssMI GATC 5 cut(s) 181, 223, 330, 335, 859
BssNI GRCGYC 4 cut(s) 524, 551, 615, 942
BssSI CACGAG 1 cut(s) 707
Bst2BI CACGAG 1 cut(s) 707
Bst4CI ACNGT 5 cut(s) 479, 485, 925, 1034, 1277
Bst6I CTCTTC 3 cut(s) 154, 260, 1174
BstACI GRCGYC 4 cut(s) 524, 551, 615, 942
BstBAI YACGTR 1 cut(s) 394
BstC8I GCNNGC 8 cut(s) 13, 54, 77, 128, 629, 807, 900, 1220
BstDEI CTNAG 7 cut(s) 80, 141, 351, 623, 997, 1075, 1176
BstDSI CCRYGG 1 cut(s) 924
BstF5I GGATG 1 cut(s) 605
BstFNI CGCG 5 cut(s) 50, 497, 548, 676, 805
BstH2I RGCGCY 1 cut(s) 554
BstHHI GCGC 6 cut(s) 52, 497, 553, 678, 805, 1199
BstKTI GATC 5 cut(s) 184, 226, 333, 338, 862
BstMAI GTCTC 6 cut(s) 97, 338, 358, 667, 949, 1179
BstMBI GATC 5 cut(s) 181, 223, 330, 335, 859
BstMCI CGRYCG 2 cut(s) 231, 1070
BstNSI RCATGY 1 cut(s) 34
BstSCI CCNGG 8 cut(s) 133, 725, 1040, 1110, 1125, 1142, 1205, 1266
BstSLI GKGCMC 2 cut(s) 708, 1041
BstUI CGCG 5 cut(s) 50, 497, 548, 676, 805
BstV1I GCAGC 4 cut(s) 89, 543, 1035, 1171
BstV2I GAAGAC 1 cut(s) 315
BstX2I RGATCY 2 cut(s) 181, 223
BstYI RGATCY 2 cut(s) 181, 223
BsuRI GGCC 9 cut(s) 5, 126, 503, 509, 809, 818, 898, 1039, 1218
BtgI CCRYGG 1 cut(s) 924
BtgZI GCGATG 1 cut(s) 132
BtsCI GGATG 1 cut(s) 605
BtsIMutI CAGTG 1 cut(s) 560
BveI ACCTGC 1 cut(s) 729
Cac8I GCNNGC 8 cut(s) 13, 54, 77, 128, 629, 807, 900, 1220
CfoI GCGC 6 cut(s) 52, 497, 553, 678, 805, 1199
Cfr10I RCCGGY 5 cut(s) 52, 113, 126, 799, 898
Cfr13I GGNCC 4 cut(s) 176, 807, 1037, 1038
CseI GACGC 3 cut(s) 4, 623, 931
Csp6I GTAC 4 cut(s) 355, 391, 460, 1072
CviAII CATG 3 cut(s) 31, 235, 274
CviQI GTAC 4 cut(s) 355, 391, 460, 1072
DdeI CTNAG 7 cut(s) 80, 141, 351, 623, 997, 1075, 1176
DinI GGCGCC 1 cut(s) 552
DpnI GATC 5 cut(s) 183, 225, 332, 337, 861
DpnII GATC 5 cut(s) 181, 223, 330, 335, 859
DriI GACNNNNNGTC 1 cut(s) 655
EaeI YGGCCR 3 cut(s) 124, 816, 1216
Eam1104I CTCTTC 3 cut(s) 154, 260, 1174
Eam1105I GACNNNNNGTC 1 cut(s) 655
EarI CTCTTC 3 cut(s) 154, 260, 1174
EciI GGCGGA 1 cut(s) 872
Ecl136II GAGCTC 2 cut(s) 253, 1008
Eco24I GRGCYC 6 cut(s) 255, 318, 887, 1010, 1041, 1133
Eco47I GGWCC 1 cut(s) 176
Eco53kI GAGCTC 2 cut(s) 253, 1008
Eco57I CTGAAG 3 cut(s) 82, 584, 1067
Eco88I CYCGRG 5 cut(s) 85, 421, 700, 958, 1009
EcoICRI GAGCTC 2 cut(s) 253, 1008
EcoO109I RGGNCCY 1 cut(s) 1038
EcoRI GAATTC 1 cut(s) 466
EcoT38I GRGCYC 6 cut(s) 255, 318, 887, 1010, 1041, 1133
EgeI GGCGCC 1 cut(s) 552
EheI GGCGCC 1 cut(s) 552
Esp3I CGTCTC 3 cut(s) 338, 667, 949
FaeI CATG 3 cut(s) 34, 238, 277
FaiI YATR 4 cut(s) 32, 236, 275, 1254
FaqI GGGAC 1 cut(s) 1094
FatI CATG 3 cut(s) 30, 234, 273
FauI CCCGC 3 cut(s) 257, 798, 925
FokI GGATG 1 cut(s) 592
FriOI GRGCYC 6 cut(s) 255, 318, 887, 1010, 1041, 1133
GlaI GCGC 6 cut(s) 51, 496, 552, 677, 804, 1198
GsuI CTGGAG 1 cut(s) 216
HaeII RGCGCY 1 cut(s) 554
HaeIII GGCC 9 cut(s) 5, 126, 503, 509, 809, 818, 898, 1039, 1218
HgaI GACGC 3 cut(s) 4, 623, 931
HhaI GCGC 6 cut(s) 52, 497, 553, 678, 805, 1199
Hin1I GRCGYC 4 cut(s) 524, 551, 615, 942
Hin1II CATG 3 cut(s) 34, 238, 277
Hin6I GCGC 6 cut(s) 50, 495, 551, 676, 803, 1197
HinP1I GCGC 6 cut(s) 50, 495, 551, 676, 803, 1197
HincII GTYRAC 2 cut(s) 19, 310
HindII GTYRAC 2 cut(s) 19, 310
HindIII AAGCTT 1 cut(s) 994
Hpy166II GTNNAC 2 cut(s) 19, 310
Hpy188III TCNNGA 5 cut(s) 179, 185, 195, 823, 830
Hpy8I GTNNAC 2 cut(s) 19, 310
Hpy99I CGWCG 8 cut(s) 526, 529, 598, 601, 604, 617, 719, 976
HpyAV CCTTC 5 cut(s) 106, 167, 493, 584, 873
HpyCH4III ACNGT 5 cut(s) 479, 485, 925, 1034, 1277
HpyCH4IV ACGT 5 cut(s) 393, 524, 1083, 1107, 1233
HpyCH4V TGCA 1 cut(s) 531
HpyF3I CTNAG 7 cut(s) 80, 141, 351, 623, 997, 1075, 1176
HpySE526I ACGT 5 cut(s) 393, 524, 1083, 1107, 1233
Hsp92I GRCGYC 4 cut(s) 524, 551, 615, 942
Hsp92II CATG 3 cut(s) 34, 238, 277
HspAI GCGC 6 cut(s) 50, 495, 551, 676, 803, 1197
KasI GGCGCC 1 cut(s) 550
Kpn2I TCCGGA 1 cut(s) 184
KroI GCCGGC 3 cut(s) 52, 126, 898
KroNI GCCGGC 3 cut(s) 54, 128, 900
Kzo9I GATC 5 cut(s) 181, 223, 330, 335, 859
LguI GCTCTTC 1 cut(s) 260
LmnI GCTCC 9 cut(s) 137, 187, 285, 415, 882, 1005, 1063, 1124, 1136
Lsp1109I GCAGC 4 cut(s) 89, 543, 1035, 1171
MaeII ACGT 5 cut(s) 393, 524, 1083, 1107, 1233
MaeIII GTNAC 4 cut(s) 479, 485, 1090, 1277
MalI GATC 5 cut(s) 183, 225, 332, 337, 861
MbiI CCGCTC 4 cut(s) 280, 848, 1003, 1066
MboI GATC 5 cut(s) 181, 223, 330, 335, 859
MboII GAAGA 8 cut(s) 141, 172, 233, 247, 280, 315, 463, 1161
MflI RGATCY 2 cut(s) 181, 223
MhlI GDGCHC 9 cut(s) 255, 318, 422, 708, 714, 887, 1010, 1041, 1133
MluCI AATT 2 cut(s) 43, 466
Mly113I GGCGCC 1 cut(s) 551
MlyI GAGTC 7 cut(s) 99, 638, 665, 1087, 1181, 1252, 1258
MmeI TCCRAC 4 cut(s) 410, 498, 636, 672
MreI CGCCGGCG 1 cut(s) 52
MroI TCCGGA 1 cut(s) 184
MroNI GCCGGC 3 cut(s) 52, 126, 898
MroXI GAANNNNTTC 1 cut(s) 569
MslI CAYNNNNRTG 1 cut(s) 29
MspA1I CMGCKG 1 cut(s) 102
MspR9I CCNGG 8 cut(s) 135, 727, 1042, 1112, 1127, 1144, 1207, 1268
MvnI CGCG 5 cut(s) 50, 497, 548, 676, 805
NaeI GCCGGC 3 cut(s) 54, 128, 900
NarI GGCGCC 1 cut(s) 551
NciI CCSGG 8 cut(s) 135, 727, 1042, 1112, 1127, 1144, 1207, 1268
NdeII GATC 5 cut(s) 181, 223, 330, 335, 859
NgoMIV GCCGGC 3 cut(s) 52, 126, 898
NlaIII CATG 3 cut(s) 34, 238, 277
NlaIV GGNNCC 5 cut(s) 552, 884, 1039, 1040, 1132
NmeAIII GCCGAG 1 cut(s) 529
NmuCI GTSAC 1 cut(s) 1090
NspI RCATGY 1 cut(s) 34
PaeR7I CTCGAG 2 cut(s) 421, 1009
PciSI GCTCTTC 1 cut(s) 260
PcsI WCGNNNNNNNCGW 5 cut(s) 344, 593, 599, 714, 749
PdiI GCCGGC 3 cut(s) 54, 128, 900
PdmI GAANNNNTTC 1 cut(s) 569
PfeI GAWTC 6 cut(s) 163, 740, 754, 772, 826, 1152
Pfl23II CGTACG 1 cut(s) 390
PfoI TCCNGGA 2 cut(s) 133, 1205
PleI GAGTC 7 cut(s) 98, 638, 664, 1087, 1181, 1251, 1257
PluTI GGCGCC 1 cut(s) 554
PpsI GAGTC 7 cut(s) 98, 638, 664, 1087, 1181, 1251, 1257
Ppu21I YACGTR 1 cut(s) 394
Psp124BI GAGCTC 2 cut(s) 255, 1010
PspLI CGTACG 1 cut(s) 390
PspN4I GGNNCC 5 cut(s) 552, 884, 1039, 1040, 1132
PspOMI GGGCCC 1 cut(s) 1037
PspPI GGNCC 4 cut(s) 176, 807, 1037, 1038
PspXI VCTCGAGB 2 cut(s) 421, 1009
PsuI RGATCY 2 cut(s) 181, 223
PvuII CAGCTG 1 cut(s) 102
RsaI GTAC 4 cut(s) 356, 392, 461, 1073
RsaNI GTAC 4 cut(s) 355, 391, 460, 1072
RseI CAYNNNNRTG 1 cut(s) 29
SacI GAGCTC 2 cut(s) 255, 1010
SapI GCTCTTC 1 cut(s) 260
Sau3AI GATC 5 cut(s) 181, 223, 330, 335, 859
Sau96I GGNCC 4 cut(s) 176, 807, 1037, 1038
SchI GAGTC 7 cut(s) 99, 638, 665, 1087, 1181, 1252, 1258
ScrFI CCNGG 8 cut(s) 135, 727, 1042, 1112, 1127, 1144, 1207, 1268
SduI GDGCHC 9 cut(s) 255, 318, 422, 708, 714, 887, 1010, 1041, 1133
SfiI GGCCNNNNNGGCC 1 cut(s) 815
SfoI GGCGCC 1 cut(s) 552
Sfr274I CTCGAG 2 cut(s) 421, 1009
SgrAI CRCCGGYG 2 cut(s) 52, 113
SinI GGWCC 1 cut(s) 176
SlaI CTCGAG 2 cut(s) 421, 1009
SmiMI CAYNNNNRTG 1 cut(s) 29
SmlI CTYRAG 2 cut(s) 421, 1009
SmoI CTYRAG 2 cut(s) 421, 1009
Sse9I AATT 2 cut(s) 43, 466
SspDI GGCGCC 1 cut(s) 550
SstI GAGCTC 2 cut(s) 255, 1010
StyD4I CCNGG 8 cut(s) 133, 725, 1040, 1110, 1125, 1142, 1205, 1266
TaaI ACNGT 5 cut(s) 479, 485, 925, 1034, 1277
TaiI ACGT 5 cut(s) 396, 527, 1086, 1110, 1236
TaqI TCGA 6 cut(s) 207, 422, 587, 738, 829, 1010
TasI AATT 2 cut(s) 43, 466
TfiI GAWTC 6 cut(s) 163, 740, 754, 772, 826, 1152
TscAI CASTG 1 cut(s) 567
TseFI GTSAC 1 cut(s) 1090
TseI GCWGC 4 cut(s) 102, 531, 1023, 1159
Tsp45I GTSAC 1 cut(s) 1090
TspDTI ATGAA 1 cut(s) 980
TspGWI ACGGA 2 cut(s) 283, 649
TspRI CASTG 1 cut(s) 567
VpaK11BI GGWCC 1 cut(s) 176
XapI RAATTY 2 cut(s) 43, 466
XceI RCATGY 1 cut(s) 34
XhoI CTCGAG 2 cut(s) 421, 1009
XmnI GAANNNNTTC 1 cut(s) 569
ZraI GACGTC 1 cut(s) 525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.