RchiOBHm_Chr5g0027461

ARM repeat protein interacting with

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0016995
Physical Location & Seq
Forward (+)
21401697 .. 21406129
4433 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30701

Sequence Viewer

Length: 4230 bp
ATGTCGCTTCACGGTTATGATCCCGGGGATCGTAACAACTGGTATCAGAGCCCACACCTGGGCCTGTTTCCGGTGAGTCCGGCGGTGTACGGCGGTGGGATCTCCGGCGTTTATTGCAGAACACATGCTTCTCACCCTCACGGTAGCCCTAGCTACCCAGCACCTCCTTCTCCATTTCCATTCCAACCAATTTACCCACCACCACCGCCACCTTCCCAAACCATCATCAATGGCTACACGTTTCCACCACACTTCCTTTACCCAAATCAAACTCATACGTCCACCAACCAACTCAGTTACCCACACTCTCAAGTCATGGTCGAACCAGAGCTTCCCTCGTTTCAACCACAGTACGCCATAAATCCTTCAATTCCAACCTTTCGGTCACCTTCAGTCCCCACATTTGTGCCTCAACCCCAATTTACAGATCCCATAGCTCCATCTTCTATTTGTTCAATGGGTAACTGTGAGCCCCTAGCTCTAATCACGGATCGGATGCGAACCATACCCTCTTCCTCTTCTTCATCATCTGGGCCACAAACCCACGAAGATACAACAAACCCATCTTCTTTGCCGCCAATTTCTGATGTTTTCGTGCAAAAGGAGGTCCTCCGCTACGAGGCCGCTATCTCCGCCCTCATCGACAAGCTCGAGAAGTTTCACCAGCCCCTCTCCATCATCGTCACAGAGGAGGTCAGCCTCGCCGGCGAATCCGCCACATCTGACTACCACCAAGGGAAGCAGGCTGTAATAGTTGAGGGACAGGATGACTTGATAAGAGATGAGGAAGAAGATGAAATCACACAAGTAGATGAGGAAAATAGAGAAAGAAAACAGAGCTTGGAGCATAGCCAAGTTGCCCATGTTTCCGGCACCGTGATGCGCGACAGGCTCCGCAGTGCGCCGGCGGTTCCCTCGTCAGGAAATTCGATTCTGGGTAACGACAAGGAACTGGAAGACAATAGTGACATGGGAGCCCATGTGTCTGATTCCGAATTGGAACAAGAATCGGAAGAGAAAGGAGATGTGAGGTTGACTGAATCCTCCCAGAATTCCACATATAACAAAGAAGGTCTGTTAGAGAAGCTTGGAGGTACGAGTTGGCCCAAGAATGCTAAATGGGTGGACAAGCTTATGTCGGATACTGAGCAAGAGCAAACAGTGGATGTGCATGATGACCTGCCAGGGGAGCTTGCATTTTATACACAGGCTCTAAATGGAATGAGGATGGCCTTTGAGAAGCTTCAGTTAATGGGGCTTCCATTTCTGAGACCTGAGGACTACTATGCAGAAATGGTGAAGTCGGAGTCCCAATTGGAGAAAGTGAAGAGCCAGTTTTTGTTGGAGATGACTACCAATCGGAGTCAAACCTCATCGTTTCAGGTATGCACTACATTGAATTTAAATTTTCAAGATGTCGGAAGTGCTTTTGAGAGTATATTATCTGGTATGCTTAAGCTCTATCATAATTGCTTGAATGGTAAAGTTGGAGATAAAAATTGGCCTCCTGATGAGTGGATTGAGAAAATGAATGGGGATGCTGGTAATTGGTTTGACAACAGGTCAACTAAAGGAATTAAACTTGATAATTTCCTAGTAGCTACTGGATTGAGTAAAGGTTATGGATTTGTGAAGTATGCTGCTGTTCAAATGGGTAATAGTGCATTCAATATACCTGGCTATAATCTTTTGTTCAATTTAGATGGTGGGCTAACAAATTTGGCTTACTGGCAAATGAGTTTGCCTCTTGCTGTTGGGCTTGAGAAAATTCAAAGGGATGCAGTTTTACTTTTACCTCAAGTGGCTCAGCTTAAGCTGCCTCAGTTTTTCCTGAGCATCAAGAAACTTGTTCTCCTGGCTGGTGCTTTAAAACCTGTTATTGATTCACTGAGTTCACCTTGTATGGAAATCCAAAGAGCAGCTGCTCTATTACTTGGTCAGTTAATTACTGCTGATTTAGATTGCAAGGCACACATTGTTCAAAGGCATGCGGTACAACCATTAATTAAGATGCTCCAGTCACCTGATTCACAGGTCAGGGAGATGTCAGCTTTTGCAATGGGGGGGTTCGCACAAGACACACATAACCAAGATGGCATTGCTCATAATGGTCCCATACATAACCAAGATGGCATTGCTCATAATGGTCCCATAGTGCCTCTATTGAAGCTACTTAATTCAAAAAAAGAATCTCTGCGACACAATGCTGCATTTGCTCTGTATAAGGAGGGCAACCTTGTAGCTCTTATAAAATTTGAAATTGTTCAGAAATTTGAAGATGGAGAATTCTTTGTTCAACGAACTAAGGATTGTGTAGAGGGGAAGATTTGTGGACGAGTATCGAACAATCTATTATATCTTATGTGGGTTACTGACGAGGATGTTCAAAGTCGAATAGCTTTGGCTCTTGCTCATCTCGGTAAGCCTGGTGATCGTCGTGTCATTTTCATTGAACATAAAGGAATGAAGCTGCTGTTGGGACTTCTTCAGTCTAAAAGCCTGAAGCAGCAACATGATGGTTCATTGTTCTTGCACAAATTAGTTACAAAAGCCACTCCACTCTCTCTTGATGTGATTACGGAATCTCTCACGGCAGTAGCCCAAGCTTTGTGCACTGGACTACATATAATTGTGGCTTACACCTTTTATCAACATTGTTCTATGGTTGTGGAAGCTTCTATAATACTGTGGTCTGCAATGCTTTGGGTCTGCCTTATTCATGCACGTGAACATGCACTAGACTACTTATTCATGACCTATACTGTCCATGCACTCTCTCTCCCTGTGGCTACAATGTTTATCAAAGTTGTTACTGGTGATAATCTTTTTCTATTTGAAGTGCCTATACTTCATCTCCCTTGCCAAACTAAACCTATCTGCCACCCAAGGAGGTTTTGTGCTGATGAAGCTATTGACTTTCTCAAAAGCAATTCAACGTTATCCTTCCTCAGGTACTCTTTTGATCCACTTCTTTCAAAAGATAATTATGTAGGCTTTGTGGCTTATAGGCTCAAGTTTTTTCAATATGTGGTGGGACATGTTCATCAGGATGAGTTTTTGTTGGGAACTAGCTCTTCAATTTTTTATTCACCATTCCATGAACTTGTGAGGAAGTTTTTTCCTTTATCACTTATTGCTGCCATCCGTTTGATACAACCACTTTTGGCTATCATATTGAGAGAAGATGCATACTATATCATTGGAATTGTGGTGGTTATCTCTATTAATGAGCTGGTGTCTTTGAAGTCTAAGAAACAAGACCTTGAACCTAGGTATGGTGATGTTTATAATGGGAATCATTGTTCTCCTGTGAGCTGTTCTCTTTTCCTCCCTGAATTCATGAATGCATGGCTTATTAAATTTTGCTTCGTTACAATTGACTTTGGAGATCTTGCCTTGGTTCCTTCAAAACATTTTCCAATACCCATGTGGTCAAATGAAGCTTATTTGCCTCTCTTGTTGTCTGCAATTATGCACTCCCAGATAATGGAATTTGTGATTTCAAGCCATCTACTGCAGAGTCCCATTAGAGAAGCCTTGAGGGTCTTTTCTAATATGCAAAATTCGAATTGTCGGCAGTCAAATTCTGATTCTCACGTGAGTGTTCATCTATGTGCACTAATACATACTTGGCAAGTTACAGATGACGAAAATGAAGCTACTACTGTGGCAATTGCACTCAACTCTAGTGCTGCAGTGTGTATTCAAAGTGTTGCAGTGTGTATTCAGCTCAGCTCATGTAAGGCTACCTTTGATACAGATATATATGTTGCAACTGCACTTATTGGCATGTATTCAAAGTGTGGTCTTTCTCTCAATTTTCAAGATAAGGAAATTGTTACTTACTTTAAGAAGATGAGGCAACATGAGATGCTTCCCACACCATTCTCTTATGCTACTTTATTGAGTTGTTGTGCAGAGCTAGCTTCTTCATTCCAAGAGAAACAGATTACTACTTCATTGATATTAATGAAAATTTCACTTGCCAAAGTGTTTGAAATTGAAACTGATGGTGGGTTTGCACACAATTTGGAGAAGATGTGTTTACTTATTGCTGGACATGAGTGGGCAGCTGATGTGATATCTTCATATTTTTCTCTTCTTAATGTGGATGACCTCGCAGATCAGTTTGTTGCACTTGTTGATTTATTGGGTTTGAAAAAAGTACTGAGTTTGGGTGGTGACTTGCATGATGAAGTAGGGACAATTTGGAAGATAATTCAGGCTTGA

Protein Analysis

1409

Amino Acids

156.81

Weight (kDa)

5.6

Isoelectric Point (pI)

42.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ebp2 PF05890 354 - 453 1.3e-23 Eukaryotic rRNA processing protein EBP2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2249, 3288
Acc36I ACCTGC 1 cut(s) 1188
AccB1I GGYRCC 1 cut(s) 872
AccB7I CCANNNNNTGG 1 cut(s) 3487
AccII CGCG 1 cut(s) 885
AclI AACGTT 1 cut(s) 2936
AclWI GGATC 6 cut(s) 14, 36, 107, 422, 498, 2957
AcuI CTGAAG 4 cut(s) 375, 1229, 2471, 2522
AcvI CACGTG 2 cut(s) 2726, 3598
AfaI GTAC 6 cut(s) 89, 353, 1096, 1995, 2954, 4167
AfiI CCNNNNNNNGG 9 cut(s) 58, 59, 70, 619, 920, 1186, 2949, 3275, 3487
AflII CTTAAG 2 cut(s) 1454, 1811
AflIII ACRYGT 2 cut(s) 237, 3037
AhdI GACNNNNNGTC 1 cut(s) 1561
AjnI CCWGG 5 cut(s) 57, 1183, 1675, 1854, 2425
AjuI GAANNNNNNNTTGG 2 cut(s) 2459, 2491
AleI CACNNNNGTG 2 cut(s) 404, 3600
AloI GAACNNNNNNTCC 2 cut(s) 3286, 3318
Alw21I GWGCWC 2 cut(s) 2615, 3619
Alw26I GTCTC 1 cut(s) 1264
Alw44I GTGCAC 2 cut(s) 2611, 3615
AlwI GGATC 6 cut(s) 14, 36, 107, 422, 498, 2957
Ama87I CYCGRG 2 cut(s) 23, 650
AoxI GGCC 6 cut(s) 61, 533, 621, 1103, 1230, 1502
ApaLI GTGCAC 2 cut(s) 2611, 3615
AseI ATTAAT 3 cut(s) 2003, 3225, 3968
Asp700I GAANNNNTTC 1 cut(s) 2262
AspA2I CCTAGG 1 cut(s) 3269
AspLEI GCGC 2 cut(s) 885, 904
AspS9I GGNCC 6 cut(s) 61, 533, 607, 1104, 2111, 2147
AsuC2I CCSGG 2 cut(s) 24, 25
AsuII TTCGAA 1 cut(s) 3566
AsuNHI GCTAGC 1 cut(s) 3922
AvaI CYCGRG 2 cut(s) 23, 650
AvaII GGWCC 3 cut(s) 607, 2111, 2147
AvrII CCTAGG 1 cut(s) 3269
AxyI CCTNAGG 2 cut(s) 1275, 2948
BaeGI GKGCMC 2 cut(s) 2615, 3619
BanI GGYRCC 1 cut(s) 872
BanII GRGCYC 3 cut(s) 53, 474, 979
BarI GAAGNNNNNNTAC 2 cut(s) 2829, 2861
BbrPI CACGTG 2 cut(s) 2726, 3598
BbsI GAAGAC 1 cut(s) 963
Bbv12I GWGCWC 2 cut(s) 2615, 3619
BceAI ACGGC 2 cut(s) 106, 2607
BciT130I CCWGG 5 cut(s) 59, 1185, 1677, 1856, 2427
BciVI GTATCC 1 cut(s) 1135
BcnI CCSGG 2 cut(s) 24, 25
BcoDI GTCTC 1 cut(s) 1264
BfaI CTAG 8 cut(s) 150, 476, 1595, 2738, 3069, 3270, 3687, 3923
BfmI CTRYAG 2 cut(s) 3515, 3693
BfrI CTTAAG 2 cut(s) 1454, 1811
BfuAI ACCTGC 1 cut(s) 1188
BfuI GTATCC 1 cut(s) 1135
BglI GCCNNNNNGGC 1 cut(s) 705
BglII AGATCT 1 cut(s) 3388
BlnI CCTAGG 1 cut(s) 3269
BlpI GCTNAGC 2 cut(s) 1806, 3731
BmcAI AGTACT 1 cut(s) 4167
Bme1390I CCNGG 7 cut(s) 24, 25, 59, 1185, 1677, 1856, 2427
Bme18I GGWCC 3 cut(s) 607, 2111, 2147
BmeRI GACNNNNNGTC 1 cut(s) 1561
BmeT110I CYCGRG 2 cut(s) 23, 650
BmgT120I GGNCC 6 cut(s) 61, 533, 607, 1104, 2111, 2147
BmiI GGNNCC 7 cut(s) 874, 893, 912, 976, 2113, 2149, 3402
BmrFI CCNGG 7 cut(s) 24, 25, 59, 1185, 1677, 1856, 2427
BmsI GCATC 8 cut(s) 486, 870, 1528, 1768, 1845, 2001, 3175, 3861
BmtI GCTAGC 1 cut(s) 3926
BpiI GAAGAC 1 cut(s) 963
BplI GAGNNNNNCTC 6 cut(s) 320, 352, 1729, 1761, 3304, 3336
BpmI CTGGAG 1 cut(s) 2000
Bpu10I CCTNAGC 1 cut(s) 1832
Bpu1102I GCTNAGC 2 cut(s) 1806, 3731
Bpu14I TTCGAA 1 cut(s) 3566
BpuEI CTTGAG 5 cut(s) 294, 1781, 1782, 2996, 3559
BpuMI CCSGG 2 cut(s) 24, 25
BsaAI YACGTR 2 cut(s) 2726, 3598
BsaI GGTCTC 1 cut(s) 1264
BsaJI CCNNGG 8 cut(s) 23, 24, 58, 733, 1184, 2885, 3269, 3396
BsaWI WCCGGW 1 cut(s) 70
Bsc4I CCNNNNNNNGG 9 cut(s) 58, 59, 70, 619, 920, 1186, 2949, 3275, 3487
Bse118I RCCGGY 2 cut(s) 704, 904
Bse1I ACTGG 8 cut(s) 44, 957, 1333, 1609, 1733, 2017, 2620, 2818
Bse21I CCTNAGG 2 cut(s) 1275, 2948
Bse3DI GCAATG 4 cut(s) 2064, 2097, 2133, 2703
BseBI CCWGG 5 cut(s) 59, 1185, 1677, 1856, 2427
BseDI CCNNGG 8 cut(s) 23, 24, 58, 733, 1184, 2885, 3269, 3396
BseLI CCNNNNNNNGG 9 cut(s) 58, 59, 70, 619, 920, 1186, 2949, 3275, 3487
BseMI GCAATG 4 cut(s) 2064, 2097, 2133, 2703
BseNI ACTGG 8 cut(s) 44, 957, 1333, 1609, 1733, 2017, 2620, 2818
BseRI GAGGAG 1 cut(s) 704
BseSI GKGCMC 2 cut(s) 2615, 3619
BseYI CCCAGC 1 cut(s) 157
BsgI GTGCAG 2 cut(s) 3762, 3936
Bsh1236I CGCG 1 cut(s) 885
BshFI GGCC 6 cut(s) 63, 535, 623, 1105, 1232, 1504
BshNI GGYRCC 1 cut(s) 872
BsiHKAI GWGCWC 2 cut(s) 2615, 3619
BsiHKCI CYCGRG 2 cut(s) 23, 650
BsiSI CCGG 7 cut(s) 24, 71, 80, 105, 705, 870, 905
BslFI GGGAC 9 cut(s) 380, 774, 1294, 2097, 2133, 2493, 3048, 3507, 4216
BslI CCNNNNNNNGG 9 cut(s) 58, 59, 70, 619, 920, 1186, 2949, 3275, 3487
BsmAI GTCTC 1 cut(s) 1264
BsmFI GGGAC 9 cut(s) 380, 774, 1294, 2097, 2133, 2493, 3048, 3507, 4216
BsmI GAATGC 3 cut(s) 1117, 1664, 3349
BsnI GGCC 6 cut(s) 63, 535, 623, 1105, 1232, 1504
Bso31I GGTCTC 1 cut(s) 1264
BsoBI CYCGRG 2 cut(s) 23, 650
Bsp119I TTCGAA 1 cut(s) 3566
Bsp1286I GDGCHC 5 cut(s) 53, 474, 979, 2615, 3619
Bsp143I GATC 9 cut(s) 19, 28, 99, 427, 490, 2431, 2962, 3388, 4123
Bsp1720I GCTNAGC 2 cut(s) 1806, 3731
BspANI GGCC 6 cut(s) 63, 535, 623, 1105, 1232, 1504
BspFNI CGCG 1 cut(s) 885
BspHI TCATGA 2 cut(s) 2751, 3339
BspLI GGNNCC 7 cut(s) 874, 893, 912, 976, 2113, 2149, 3402
BspMAI CTGCAG 2 cut(s) 3519, 3697
BspMI ACCTGC 1 cut(s) 1188
BspOI GCTAGC 1 cut(s) 3926
BspPI GGATC 6 cut(s) 14, 36, 107, 422, 498, 2957
BspQI GCTCTTC 2 cut(s) 1322, 3079
BspT104I TTCGAA 1 cut(s) 3566
BspT107I GGYRCC 1 cut(s) 872
BspTI CTTAAG 2 cut(s) 1454, 1811
BspTNI GGTCTC 1 cut(s) 1264
BsrDI GCAATG 4 cut(s) 2064, 2097, 2133, 2703
BsrFI RCCGGY 2 cut(s) 704, 904
BsrI ACTGG 8 cut(s) 44, 957, 1333, 1609, 1733, 2017, 2620, 2818
BssAI RCCGGY 2 cut(s) 704, 904
BssECI CCNNGG 8 cut(s) 23, 24, 58, 733, 1184, 2885, 3269, 3396
BssMI GATC 9 cut(s) 19, 28, 99, 427, 490, 2431, 2962, 3388, 4123
BssT1I CCWWGG 4 cut(s) 733, 2885, 3269, 3396
Bst2UI CCWGG 5 cut(s) 59, 1185, 1677, 1856, 2427
Bst4CI ACNGT 9 cut(s) 14, 143, 351, 467, 877, 1162, 2688, 2764, 3667
Bst6I CTCTTC 6 cut(s) 517, 523, 1008, 1322, 3079, 4104
BstAFI CTTAAG 2 cut(s) 1454, 1811
BstBAI YACGTR 2 cut(s) 2726, 3598
BstBI TTCGAA 1 cut(s) 3566
BstC8I GCNNGC 6 cut(s) 706, 744, 906, 1194, 1989, 3924
BstEII GGTNACC 1 cut(s) 384
BstENI CCTNNNNNAGG 1 cut(s) 2947
BstFNI CGCG 1 cut(s) 885
BstHHI GCGC 2 cut(s) 885, 904
BstKTI GATC 9 cut(s) 22, 31, 102, 430, 493, 2434, 2965, 3391, 4126
BstMAI GTCTC 1 cut(s) 1264
BstMBI GATC 9 cut(s) 19, 28, 99, 427, 490, 2431, 2962, 3388, 4123
BstMWI GCNNNNNNNGC 9 cut(s) 114, 632, 705, 889, 1189, 1816, 2213, 2906, 3923
BstNI CCWGG 5 cut(s) 59, 1185, 1677, 1856, 2427
BstNSI RCATGY 5 cut(s) 128, 1991, 2735, 3041, 3793
BstPI GGTNACC 1 cut(s) 384
BstSCI CCNGG 7 cut(s) 22, 23, 57, 1183, 1675, 1854, 2425
BstSFI CTRYAG 2 cut(s) 3515, 3693
BstSLI GKGCMC 2 cut(s) 2615, 3619
BstUI CGCG 1 cut(s) 885
BstV2I GAAGAC 1 cut(s) 963
BstX2I RGATCY 3 cut(s) 99, 427, 3388
BstYI RGATCY 3 cut(s) 99, 427, 3388
Bsu36I CCTNAGG 2 cut(s) 1275, 2948
BsuI GTATCC 1 cut(s) 1135
BsuRI GGCC 6 cut(s) 63, 535, 623, 1105, 1232, 1504
BtsI GCAGTG 3 cut(s) 904, 3702, 3723
BtsIMutI CAGTG 6 cut(s) 904, 1167, 1886, 2613, 3702, 3723
BveI ACCTGC 1 cut(s) 1188
Cac8I GCNNGC 6 cut(s) 706, 744, 906, 1194, 1989, 3924
CciI TCATGA 2 cut(s) 2751, 3339
CfoI GCGC 2 cut(s) 885, 904
Cfr10I RCCGGY 2 cut(s) 704, 904
Cfr13I GGNCC 6 cut(s) 61, 533, 607, 1104, 2111, 2147
Cfr9I CCCGGG 1 cut(s) 23
Csp6I GTAC 6 cut(s) 88, 352, 1095, 1994, 2953, 4166
CviQI GTAC 6 cut(s) 88, 352, 1095, 1994, 2953, 4166
DpnI GATC 9 cut(s) 21, 30, 101, 429, 492, 2433, 2964, 3390, 4125
DpnII GATC 9 cut(s) 19, 28, 99, 427, 490, 2431, 2962, 3388, 4123
DraI TTTAAA 2 cut(s) 1404, 1869
DriI GACNNNNNGTC 1 cut(s) 1561
Eam1104I CTCTTC 6 cut(s) 517, 523, 1008, 1322, 3079, 4104
Eam1105I GACNNNNNGTC 1 cut(s) 1561
EarI CTCTTC 6 cut(s) 517, 523, 1008, 1322, 3079, 4104
EciI GGCGGA 2 cut(s) 622, 703
Eco130I CCWWGG 4 cut(s) 733, 2885, 3269, 3396
Eco24I GRGCYC 3 cut(s) 53, 474, 979
Eco31I GGTCTC 1 cut(s) 1264
Eco32I GATATC 1 cut(s) 4083
Eco47I GGWCC 3 cut(s) 607, 2111, 2147
Eco57I CTGAAG 4 cut(s) 375, 1229, 2471, 2522
Eco72I CACGTG 2 cut(s) 2726, 3598
Eco81I CCTNAGG 2 cut(s) 1275, 2948
Eco88I CYCGRG 2 cut(s) 23, 650
Eco91I GGTNACC 1 cut(s) 384
EcoNI CCTNNNNNAGG 1 cut(s) 2947
EcoO109I RGGNCCY 1 cut(s) 607
EcoO65I GGTNACC 1 cut(s) 384
EcoRI GAATTC 3 cut(s) 1051, 2285, 3335
EcoRII CCWGG 5 cut(s) 57, 1183, 1675, 1854, 2425
EcoRV GATATC 1 cut(s) 4083
EcoT14I CCWWGG 4 cut(s) 733, 2885, 3269, 3396
EcoT22I ATGCAT 2 cut(s) 3190, 3349
EcoT38I GRGCYC 3 cut(s) 53, 474, 979
ErhI CCWWGG 4 cut(s) 733, 2885, 3269, 3396
FalI AAGNNNNNCTT 2 cut(s) 3734, 3766
FaqI GGGAC 9 cut(s) 380, 774, 1294, 2097, 2133, 2493, 3048, 3507, 4216
FriOI GRGCYC 3 cut(s) 53, 474, 979
FspBI CTAG 8 cut(s) 150, 476, 1595, 2738, 3069, 3270, 3687, 3923
GlaI GCGC 2 cut(s) 884, 903
GsaI CCCAGC 1 cut(s) 161
GsuI CTGGAG 1 cut(s) 2000
HaeIII GGCC 6 cut(s) 63, 535, 623, 1105, 1232, 1504
HapII CCGG 7 cut(s) 24, 71, 80, 105, 705, 870, 905
HhaI GCGC 2 cut(s) 885, 904
Hin6I GCGC 2 cut(s) 883, 902
HinP1I GCGC 2 cut(s) 883, 902
HincII GTYRAC 2 cut(s) 1035, 1566
HindII GTYRAC 2 cut(s) 1035, 1566
HindIII AAGCTT 6 cut(s) 1085, 1130, 1241, 2604, 2673, 3441
HpaII CCGG 7 cut(s) 24, 71, 80, 105, 705, 870, 905
Hpy99I CGWCG 1 cut(s) 2439
HpyAV CCTTC 7 cut(s) 177, 222, 375, 399, 1064, 2953, 3414
HpyCH4III ACNGT 9 cut(s) 14, 143, 351, 467, 877, 1162, 2688, 2764, 3667
HpyCH4IV ACGT 5 cut(s) 239, 278, 2725, 2936, 3597
HpyF10VI GCNNNNNNNGC 9 cut(s) 114, 632, 705, 889, 1189, 1816, 2213, 2906, 3923
HpySE526I ACGT 5 cut(s) 239, 278, 2725, 2936, 3597
HspAI GCGC 2 cut(s) 883, 902
KroI GCCGGC 2 cut(s) 704, 904
KroNI GCCGGC 2 cut(s) 706, 906
Kzo9I GATC 9 cut(s) 19, 28, 99, 427, 490, 2431, 2962, 3388, 4123
LguI GCTCTTC 2 cut(s) 1322, 3079
LmnI GCTCC 6 cut(s) 442, 844, 897, 974, 1189, 2019
LweI GCATC 8 cut(s) 486, 870, 1528, 1768, 1845, 2001, 3175, 3861
MaeI CTAG 8 cut(s) 150, 476, 1595, 2738, 3069, 3270, 3687, 3923
MaeII ACGT 5 cut(s) 239, 278, 2725, 2936, 3597
MalI GATC 9 cut(s) 21, 30, 101, 429, 492, 2433, 2964, 3390, 4125
MboI GATC 9 cut(s) 19, 28, 99, 427, 490, 2431, 2962, 3388, 4123
MfeI CAATTG 3 cut(s) 1313, 3375, 3672
MflI RGATCY 3 cut(s) 99, 427, 3388
MhlI GDGCHC 5 cut(s) 53, 474, 979, 2615, 3619
MlyI GAGTC 4 cut(s) 85, 1316, 1372, 3529
MmeI TCCRAC 7 cut(s) 208, 398, 1119, 1284, 1323, 1399, 1468
Mph1103I ATGCAT 2 cut(s) 3190, 3349
MreI CGCCGGCG 2 cut(s) 704, 904
MroNI GCCGGC 2 cut(s) 704, 904
MroXI GAANNNNTTC 1 cut(s) 2262
MslI CAYNNNNRTG 7 cut(s) 15, 404, 878, 2724, 3048, 3600, 3612
MspA1I CMGCKG 2 cut(s) 1922, 4073
MspCI CTTAAG 2 cut(s) 1454, 1811
MspI CCGG 7 cut(s) 24, 71, 80, 105, 705, 870, 905
MspR9I CCNGG 7 cut(s) 24, 25, 59, 1185, 1677, 1856, 2427
MunI CAATTG 3 cut(s) 1313, 3375, 3672
Mva1269I GAATGC 3 cut(s) 1117, 1664, 3349
MvaI CCWGG 5 cut(s) 59, 1185, 1677, 1856, 2427
MvnI CGCG 1 cut(s) 885
MwoI GCNNNNNNNGC 9 cut(s) 114, 632, 705, 889, 1189, 1816, 2213, 2906, 3923
NaeI GCCGGC 2 cut(s) 706, 906
NciI CCSGG 2 cut(s) 24, 25
NdeII GATC 9 cut(s) 19, 28, 99, 427, 490, 2431, 2962, 3388, 4123
NgoMIV GCCGGC 2 cut(s) 704, 904
NheI GCTAGC 1 cut(s) 3922
NlaIV GGNNCC 7 cut(s) 874, 893, 912, 976, 2113, 2149, 3402
NmuCI GTSAC 5 cut(s) 384, 682, 965, 2019, 4181
NsiI ATGCAT 2 cut(s) 3190, 3349
NspI RCATGY 5 cut(s) 128, 1991, 2735, 3041, 3793
NspV TTCGAA 1 cut(s) 3566
OliI CACNNNNGTG 2 cut(s) 404, 3600
PacI TTAATTAA 1 cut(s) 2007
PaeI GCATGC 1 cut(s) 1991
PaeR7I CTCGAG 1 cut(s) 650
PagI TCATGA 2 cut(s) 2751, 3339
PciI ACATGT 1 cut(s) 3037
PciSI GCTCTTC 2 cut(s) 1322, 3079
PcsI WCGNNNNNNNCGW 1 cut(s) 648
PctI GAATGC 3 cut(s) 1117, 1664, 3349
PdiI GCCGGC 2 cut(s) 706, 906
PdmI GAANNNNTTC 1 cut(s) 2262
PflMI CCANNNNNTGG 1 cut(s) 3487
PleI GAGTC 4 cut(s) 84, 1315, 1371, 3528
PmaCI CACGTG 2 cut(s) 2726, 3598
PmlI CACGTG 2 cut(s) 2726, 3598
PpsI GAGTC 4 cut(s) 84, 1315, 1371, 3528
Ppu21I YACGTR 2 cut(s) 2726, 3598
PpuMI RGGWCCY 1 cut(s) 607
PscI ACATGT 1 cut(s) 3037
PshBI ATTAAT 3 cut(s) 2003, 3225, 3968
PsiI TTATAA 2 cut(s) 2249, 3288
Psp1406I AACGTT 1 cut(s) 2936
Psp5II RGGWCCY 1 cut(s) 607
Psp6I CCWGG 5 cut(s) 57, 1183, 1675, 1854, 2425
PspCI CACGTG 2 cut(s) 2726, 3598
PspEI GGTNACC 1 cut(s) 384
PspFI CCCAGC 1 cut(s) 157
PspGI CCWGG 5 cut(s) 57, 1183, 1675, 1854, 2425
PspN4I GGNNCC 7 cut(s) 874, 893, 912, 976, 2113, 2149, 3402
PspPI GGNCC 6 cut(s) 61, 533, 607, 1104, 2111, 2147
PspPPI RGGWCCY 1 cut(s) 607
PstI CTGCAG 2 cut(s) 3519, 3697
PsuI RGATCY 3 cut(s) 99, 427, 3388
PvuII CAGCTG 2 cut(s) 1922, 4073
RsaI GTAC 6 cut(s) 89, 353, 1096, 1995, 2954, 4167
RsaNI GTAC 6 cut(s) 88, 352, 1095, 1994, 2953, 4166
RseI CAYNNNNRTG 7 cut(s) 15, 404, 878, 2724, 3048, 3600, 3612
SapI GCTCTTC 2 cut(s) 1322, 3079
Sau3AI GATC 9 cut(s) 19, 28, 99, 427, 490, 2431, 2962, 3388, 4123
Sau96I GGNCC 6 cut(s) 61, 533, 607, 1104, 2111, 2147
ScaI AGTACT 1 cut(s) 4167
SchI GAGTC 4 cut(s) 85, 1316, 1372, 3529
ScrFI CCNGG 7 cut(s) 24, 25, 59, 1185, 1677, 1856, 2427
SduI GDGCHC 5 cut(s) 53, 474, 979, 2615, 3619
SfaNI GCATC 8 cut(s) 486, 870, 1528, 1768, 1845, 2001, 3175, 3861
SfcI CTRYAG 2 cut(s) 3515, 3693
Sfr274I CTCGAG 1 cut(s) 650
SfuI TTCGAA 1 cut(s) 3566
SgrAI CRCCGGYG 2 cut(s) 704, 904
SinI GGWCC 3 cut(s) 607, 2111, 2147
SlaI CTCGAG 1 cut(s) 650
SmaI CCCGGG 1 cut(s) 25
SmiI ATTTAAAT 1 cut(s) 1404
SmiMI CAYNNNNRTG 7 cut(s) 15, 404, 878, 2724, 3048, 3600, 3612
SmlI CTYRAG 8 cut(s) 309, 650, 1454, 1760, 1797, 1811, 3011, 3538
SmoI CTYRAG 8 cut(s) 309, 650, 1454, 1760, 1797, 1811, 3011, 3538
SphI GCATGC 1 cut(s) 1991
SspMI CTAG 8 cut(s) 150, 476, 1595, 2738, 3069, 3270, 3687, 3923
StyD4I CCNGG 7 cut(s) 22, 23, 57, 1183, 1675, 1854, 2425
StyI CCWWGG 4 cut(s) 733, 2885, 3269, 3396
SwaI ATTTAAAT 1 cut(s) 1404
TaaI ACNGT 9 cut(s) 14, 143, 351, 467, 877, 1162, 2688, 2764, 3667
TaiI ACGT 5 cut(s) 242, 281, 2728, 2939, 3600
TaqI TCGA 7 cut(s) 321, 642, 651, 929, 2342, 2392, 3566
TaqII GACCGA 1 cut(s) 372
TatI WGTACW 1 cut(s) 4165
TauI GCSGC 2 cut(s) 577, 626
TscAI CASTG 6 cut(s) 904, 1167, 1893, 2620, 3702, 3723
TseFI GTSAC 5 cut(s) 384, 682, 965, 2019, 4181
Tsp45I GTSAC 5 cut(s) 384, 682, 965, 2019, 4181
TspGWI ACGGA 3 cut(s) 503, 2594, 3134
TspMI CCCGGG 1 cut(s) 23
TspRI CASTG 6 cut(s) 904, 1167, 1893, 2620, 3702, 3723
Van91I CCANNNNNTGG 1 cut(s) 3487
Vha464I CTTAAG 2 cut(s) 1454, 1811
VneI GTGCAC 2 cut(s) 2611, 3615
VpaK11BI GGWCC 3 cut(s) 607, 2111, 2147
VspI ATTAAT 3 cut(s) 2003, 3225, 3968
XagI CCTNNNNNAGG 1 cut(s) 2947
XceI RCATGY 5 cut(s) 128, 1991, 2735, 3041, 3793
XcmI CCANNNNNNNNNTGG 1 cut(s) 3426
XhoI CTCGAG 1 cut(s) 650
XmaI CCCGGG 1 cut(s) 23
XmaJI CCTAGG 1 cut(s) 3269
XmnI GAANNNNTTC 1 cut(s) 2262
XspI CTAG 8 cut(s) 150, 476, 1595, 2738, 3069, 3270, 3687, 3923
ZrmI AGTACT 1 cut(s) 4167
Zsp2I ATGCAT 2 cut(s) 3190, 3349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.