Arm repeat protein interacting with
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0488471 RchiOBHm_Chr5g0027461 RchiOBHm_Chr6g0244361 RchiOBHm_Chr7g0200771 |
| rosa_multiflora | Rmu_co8359501.1_g000001 Rmu_sc0004533.1_g000001 Rmu_sc0006898.1_g000005 Rmu_sc0032734.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00027710 Rroxscaffold_1G00074240 |
| rosa_samantha | Rh5BG270700 Rh6AG023200 Rh7CG467100 |
| rosa_wichuraiana | Rw3G025410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 30 |
| AcuI | CTGAAG | 1 cut(s) | 128 |
| AcvI | CACGTG | 1 cut(s) | 226 |
| AfaI | GTAC | 1 cut(s) | 232 |
| AflIII | ACRYGT | 2 cut(s) | 223, 225 |
| AleI | CACNNNNGTG | 1 cut(s) | 226 |
| AluBI | AGCT | 1 cut(s) | 76 |
| AluI | AGCT | 1 cut(s) | 76 |
| AoxI | GGCC | 1 cut(s) | 132 |
| ApeKI | GCWGC | 2 cut(s) | 76, 112 |
| AsuII | TTCGAA | 1 cut(s) | 24 |
| BbrPI | CACGTG | 1 cut(s) | 226 |
| BbsI | GAAGAC | 1 cut(s) | 66 |
| BbvI | GCAGC | 2 cut(s) | 63, 124 |
| BccI | CCATC | 1 cut(s) | 116 |
| BfaI | CTAG | 1 cut(s) | 80 |
| BisI | GCNGC | 2 cut(s) | 77, 113 |
| BlsI | GCNGC | 2 cut(s) | 78, 114 |
| BmsI | GCATC | 2 cut(s) | 37, 169 |
| BpiI | GAAGAC | 1 cut(s) | 66 |
| BpmI | CTGGAG | 1 cut(s) | 174 |
| Bpu14I | TTCGAA | 1 cut(s) | 24 |
| BpuEI | CTTGAG | 1 cut(s) | 113 |
| BsaAI | YACGTR | 1 cut(s) | 226 |
| BseXI | GCAGC | 2 cut(s) | 63, 124 |
| BshFI | GGCC | 1 cut(s) | 134 |
| BslFI | GGGAC | 1 cut(s) | 46 |
| BsmFI | GGGAC | 1 cut(s) | 46 |
| BsnI | GGCC | 1 cut(s) | 134 |
| Bsp119I | TTCGAA | 1 cut(s) | 24 |
| Bsp1407I | TGTACA | 1 cut(s) | 230 |
| BspACI | CCGC | 1 cut(s) | 30 |
| BspANI | GGCC | 1 cut(s) | 134 |
| BspT104I | TTCGAA | 1 cut(s) | 24 |
| BsrGI | TGTACA | 1 cut(s) | 230 |
| Bst4CI | ACNGT | 1 cut(s) | 8 |
| BstAUI | TGTACA | 1 cut(s) | 230 |
| BstBAI | YACGTR | 1 cut(s) | 226 |
| BstBI | TTCGAA | 1 cut(s) | 24 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 85, 155 |
| BstV1I | GCAGC | 2 cut(s) | 63, 124 |
| BstV2I | GAAGAC | 1 cut(s) | 66 |
| BsuRI | GGCC | 1 cut(s) | 134 |
| Csp6I | GTAC | 1 cut(s) | 231 |
| CviAII | CATG | 2 cut(s) | 119, 173 |
| CviJI | RGCY | 6 cut(s) | 76, 88, 105, 134, 149, 158 |
| CviKI_1 | RGCY | 6 cut(s) | 76, 88, 105, 134, 149, 158 |
| CviQI | GTAC | 1 cut(s) | 231 |
| Eco57I | CTGAAG | 1 cut(s) | 128 |
| Eco72I | CACGTG | 1 cut(s) | 226 |
| FaeI | CATG | 2 cut(s) | 122, 176 |
| FaiI | YATR | 4 cut(s) | 120, 174, 212, 235 |
| FaqI | GGGAC | 1 cut(s) | 46 |
| FatI | CATG | 2 cut(s) | 118, 172 |
| FauI | CCCGC | 1 cut(s) | 23 |
| Fnu4HI | GCNGC | 2 cut(s) | 77, 113 |
| Fsp4HI | GCNGC | 2 cut(s) | 77, 113 |
| FspBI | CTAG | 1 cut(s) | 80 |
| GluI | GCNGC | 2 cut(s) | 77, 113 |
| GsuI | CTGGAG | 1 cut(s) | 174 |
| HaeIII | GGCC | 1 cut(s) | 134 |
| Hin1II | CATG | 2 cut(s) | 122, 176 |
| HinfI | GANTC | 1 cut(s) | 95 |
| Hpy166II | GTNNAC | 1 cut(s) | 231 |
| Hpy188III | TCNNGA | 1 cut(s) | 92 |
| Hpy8I | GTNNAC | 1 cut(s) | 231 |
| HpyAV | CCTTC | 1 cut(s) | 20 |
| HpyCH4III | ACNGT | 1 cut(s) | 8 |
| HpyCH4IV | ACGT | 1 cut(s) | 225 |
| HpyCH4V | TGCA | 3 cut(s) | 50, 139, 182 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 85, 155 |
| HpySE526I | ACGT | 1 cut(s) | 225 |
| Hsp92II | CATG | 2 cut(s) | 122, 176 |
| LmnI | GCTCC | 1 cut(s) | 73 |
| LpnPI | CCDG | 3 cut(s) | 119, 191, 204 |
| Lsp1109I | GCAGC | 2 cut(s) | 63, 124 |
| LweI | GCATC | 2 cut(s) | 37, 169 |
| MaeI | CTAG | 1 cut(s) | 80 |
| MaeII | ACGT | 1 cut(s) | 225 |
| MboII | GAAGA | 4 cut(s) | 53, 56, 68, 71 |
| MluCI | AATT | 2 cut(s) | 19, 215 |
| MlyI | GAGTC | 1 cut(s) | 104 |
| MnlI | CCTC | 4 cut(s) | 46, 59, 169, 198 |
| MseI | TTAA | 1 cut(s) | 18 |
| MslI | CAYNNNNRTG | 2 cut(s) | 177, 226 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 85, 155 |
| NlaIII | CATG | 2 cut(s) | 122, 176 |
| NspV | TTCGAA | 1 cut(s) | 24 |
| OliI | CACNNNNGTG | 1 cut(s) | 226 |
| PkrI | GCNGC | 2 cut(s) | 78, 114 |
| PleI | GAGTC | 1 cut(s) | 103 |
| PmaCI | CACGTG | 1 cut(s) | 226 |
| PmlI | CACGTG | 1 cut(s) | 226 |
| PpsI | GAGTC | 1 cut(s) | 103 |
| Ppu21I | YACGTR | 1 cut(s) | 226 |
| PspCI | CACGTG | 1 cut(s) | 226 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 168, 200 |
| RsaI | GTAC | 1 cut(s) | 232 |
| RsaNI | GTAC | 1 cut(s) | 231 |
| RseI | CAYNNNNRTG | 2 cut(s) | 177, 226 |
| SaqAI | TTAA | 1 cut(s) | 18 |
| SatI | GCNGC | 2 cut(s) | 77, 113 |
| SchI | GAGTC | 1 cut(s) | 104 |
| SetI | ASST | 4 cut(s) | 16, 78, 210, 228 |
| SfaNI | GCATC | 2 cut(s) | 37, 169 |
| SfuI | TTCGAA | 1 cut(s) | 24 |
| SgeI | CNNG | 9 cut(s) | 43, 92, 104, 118, 131, 148, 185, 203, 218 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 177, 226 |
| SmlI | CTYRAG | 1 cut(s) | 92 |
| SmoI | CTYRAG | 1 cut(s) | 92 |
| Sse9I | AATT | 2 cut(s) | 19, 215 |
| SsiI | CCGC | 1 cut(s) | 30 |
| SspMI | CTAG | 1 cut(s) | 80 |
| TaaI | ACNGT | 1 cut(s) | 8 |
| TaiI | ACGT | 1 cut(s) | 228 |
| TaqI | TCGA | 1 cut(s) | 24 |
| TasI | AATT | 2 cut(s) | 19, 215 |
| TatI | WGTACW | 1 cut(s) | 230 |
| Tru1I | TTAA | 1 cut(s) | 18 |
| Tru9I | TTAA | 1 cut(s) | 18 |
| TseI | GCWGC | 2 cut(s) | 76, 112 |
| TspDTI | ATGAA | 2 cut(s) | 54, 117 |
| TspGWI | ACGGA | 1 cut(s) | 78 |
| XspI | CTAG | 1 cut(s) | 80 |