Clathrin assembly protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g13290 |
| prunus_persica | Prupe.5G210900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0416771 RchiOBHm_Chr5g0036501 |
| rosa_laevigata | RLG00000005015 |
| rosa_roxburghii | Rroxscaffold_3G00270120 Rroxscaffold_3G00273890 Rroxscaffold_7G00189790 |
| rosa_rugosa | Rorug06G0459000 Rorug06G0461200 |
| rosa_samantha | Rh6DG319700 Rh7AG062000 Rh7BG062200 Rh7CG063600 Rh7DG061800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 23, 95 |
| AcuI | CTGAAG | 1 cut(s) | 92 |
| AfaI | GTAC | 2 cut(s) | 13, 77 |
| AjnI | CCWGG | 1 cut(s) | 51 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 80, 112 |
| Alw21I | GWGCWC | 1 cut(s) | 190 |
| Alw44I | GTGCAC | 1 cut(s) | 186 |
| AoxI | GGCC | 1 cut(s) | 169 |
| ApaLI | GTGCAC | 1 cut(s) | 186 |
| ApeKI | GCWGC | 1 cut(s) | 128 |
| BaeGI | GKGCMC | 1 cut(s) | 190 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 28 |
| Bbv12I | GWGCWC | 1 cut(s) | 190 |
| BbvI | GCAGC | 1 cut(s) | 115 |
| BciT130I | CCWGG | 1 cut(s) | 53 |
| BfuAI | ACCTGC | 2 cut(s) | 23, 95 |
| BisI | GCNGC | 1 cut(s) | 129 |
| BlsI | GCNGC | 1 cut(s) | 130 |
| Bme1390I | CCNGG | 1 cut(s) | 53 |
| BmrFI | CCNGG | 1 cut(s) | 53 |
| BmsI | GCATC | 1 cut(s) | 41 |
| BsaJI | CCNNGG | 1 cut(s) | 172 |
| BseBI | CCWGG | 1 cut(s) | 53 |
| BseDI | CCNNGG | 1 cut(s) | 172 |
| BseSI | GKGCMC | 1 cut(s) | 190 |
| BseXI | GCAGC | 1 cut(s) | 115 |
| BshFI | GGCC | 1 cut(s) | 171 |
| BsiHKAI | GWGCWC | 1 cut(s) | 190 |
| BsnI | GGCC | 1 cut(s) | 171 |
| Bsp1286I | GDGCHC | 1 cut(s) | 190 |
| Bsp143I | GATC | 1 cut(s) | 91 |
| BspANI | GGCC | 1 cut(s) | 171 |
| BspMI | ACCTGC | 2 cut(s) | 23, 95 |
| BssECI | CCNNGG | 1 cut(s) | 172 |
| BssMI | GATC | 1 cut(s) | 91 |
| BssT1I | CCWWGG | 1 cut(s) | 172 |
| Bst2UI | CCWGG | 1 cut(s) | 53 |
| Bst4CI | ACNGT | 1 cut(s) | 59 |
| BstC8I | GCNNGC | 1 cut(s) | 169 |
| BstKTI | GATC | 1 cut(s) | 94 |
| BstMBI | GATC | 1 cut(s) | 91 |
| BstNI | CCWGG | 1 cut(s) | 53 |
| BstSCI | CCNGG | 1 cut(s) | 51 |
| BstSLI | GKGCMC | 1 cut(s) | 190 |
| BstV1I | GCAGC | 1 cut(s) | 115 |
| BsuRI | GGCC | 1 cut(s) | 171 |
| BveI | ACCTGC | 2 cut(s) | 23, 95 |
| Cac8I | GCNNGC | 1 cut(s) | 169 |
| Csp6I | GTAC | 2 cut(s) | 12, 76 |
| CviJI | RGCY | 1 cut(s) | 171 |
| CviKI_1 | RGCY | 1 cut(s) | 171 |
| CviQI | GTAC | 2 cut(s) | 12, 76 |
| DpnI | GATC | 1 cut(s) | 93 |
| DpnII | GATC | 1 cut(s) | 91 |
| Eco130I | CCWWGG | 1 cut(s) | 172 |
| Eco147I | AGGCCT | 1 cut(s) | 171 |
| Eco57I | CTGAAG | 1 cut(s) | 92 |
| EcoRII | CCWGG | 1 cut(s) | 51 |
| EcoT14I | CCWWGG | 1 cut(s) | 172 |
| EcoT22I | ATGCAT | 1 cut(s) | 34 |
| ErhI | CCWWGG | 1 cut(s) | 172 |
| FaiI | YATR | 4 cut(s) | 28, 30, 37, 126 |
| Fnu4HI | GCNGC | 1 cut(s) | 129 |
| Fsp4HI | GCNGC | 1 cut(s) | 129 |
| GluI | GCNGC | 1 cut(s) | 129 |
| HaeIII | GGCC | 1 cut(s) | 171 |
| HincII | GTYRAC | 1 cut(s) | 160 |
| HindII | GTYRAC | 1 cut(s) | 160 |
| HpaI | GTTAAC | 1 cut(s) | 160 |
| Hpy166II | GTNNAC | 2 cut(s) | 160, 188 |
| Hpy188I | TCNGA | 1 cut(s) | 87 |
| Hpy188III | TCNNGA | 2 cut(s) | 41, 70 |
| Hpy8I | GTNNAC | 2 cut(s) | 160, 188 |
| HpyCH4III | ACNGT | 1 cut(s) | 59 |
| HpyCH4V | TGCA | 5 cut(s) | 32, 104, 131, 167, 188 |
| KspAI | GTTAAC | 1 cut(s) | 160 |
| Kzo9I | GATC | 1 cut(s) | 91 |
| LpnPI | CCDG | 6 cut(s) | 28, 38, 65, 83, 90, 153 |
| Lsp1109I | GCAGC | 1 cut(s) | 115 |
| LweI | GCATC | 1 cut(s) | 41 |
| MalI | GATC | 1 cut(s) | 93 |
| MboI | GATC | 1 cut(s) | 91 |
| MboII | GAAGA | 1 cut(s) | 56 |
| MhlI | GDGCHC | 1 cut(s) | 190 |
| MluCI | AATT | 3 cut(s) | 111, 132, 151 |
| Mph1103I | ATGCAT | 1 cut(s) | 34 |
| MseI | TTAA | 1 cut(s) | 159 |
| MslI | CAYNNNNRTG | 1 cut(s) | 27 |
| MspR9I | CCNGG | 1 cut(s) | 53 |
| MvaI | CCWGG | 1 cut(s) | 53 |
| NdeII | GATC | 1 cut(s) | 91 |
| NsiI | ATGCAT | 1 cut(s) | 34 |
| PceI | AGGCCT | 1 cut(s) | 171 |
| PkrI | GCNGC | 1 cut(s) | 130 |
| Psp6I | CCWGG | 1 cut(s) | 51 |
| PspGI | CCWGG | 1 cut(s) | 51 |
| RsaI | GTAC | 2 cut(s) | 13, 77 |
| RsaNI | GTAC | 2 cut(s) | 12, 76 |
| RseI | CAYNNNNRTG | 1 cut(s) | 27 |
| SaqAI | TTAA | 1 cut(s) | 159 |
| SatI | GCNGC | 1 cut(s) | 129 |
| Sau3AI | GATC | 1 cut(s) | 91 |
| ScrFI | CCNGG | 1 cut(s) | 53 |
| SduI | GDGCHC | 1 cut(s) | 190 |
| SetI | ASST | 2 cut(s) | 17, 109 |
| SfaNI | GCATC | 1 cut(s) | 41 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 27 |
| Sse9I | AATT | 3 cut(s) | 111, 132, 151 |
| SseBI | AGGCCT | 1 cut(s) | 171 |
| StuI | AGGCCT | 1 cut(s) | 171 |
| StyD4I | CCNGG | 1 cut(s) | 51 |
| StyI | CCWWGG | 1 cut(s) | 172 |
| TaaI | ACNGT | 1 cut(s) | 59 |
| TaqI | TCGA | 1 cut(s) | 42 |
| TasI | AATT | 3 cut(s) | 111, 132, 151 |
| Tru1I | TTAA | 1 cut(s) | 159 |
| Tru9I | TTAA | 1 cut(s) | 159 |
| TseI | GCWGC | 1 cut(s) | 128 |
| TspDTI | ATGAA | 1 cut(s) | 11 |
| VneI | GTGCAC | 1 cut(s) | 186 |
| Zsp2I | ATGCAT | 1 cut(s) | 34 |