Clathrin assembly protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g13290 |
| prunus_persica | Prupe.5G210900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0416771 RchiOBHm_Chr5g0036501 |
| rosa_laevigata | RLG00000005015 |
| rosa_roxburghii | Rroxscaffold_3G00270120 Rroxscaffold_3G00273890 Rroxscaffold_7G00189790 |
| rosa_rugosa | Rorug06G0459000 Rorug06G0461200 |
| rosa_samantha | Rh6DG319700 Rh7AG062000 Rh7BG062200 Rh7CG063600 Rh7DG061800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 23, 321 |
| AcsI | RAATTY | 3 cut(s) | 118, 214, 278 |
| AcuI | CTGAAG | 1 cut(s) | 92 |
| AfaI | GTAC | 5 cut(s) | 77, 144, 173, 240, 268 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 311, 323 |
| AgsI | TTSAA | 2 cut(s) | 112, 208 |
| AjnI | CCWGG | 1 cut(s) | 51 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 80, 112, 176, 208 |
| AluBI | AGCT | 2 cut(s) | 132, 228 |
| AluI | AGCT | 2 cut(s) | 132, 228 |
| ApoI | RAATTY | 3 cut(s) | 118, 214, 278 |
| AspS9I | GGNCC | 1 cut(s) | 314 |
| AvaII | GGWCC | 1 cut(s) | 314 |
| BccI | CCATC | 3 cut(s) | 301, 305, 328 |
| BciT130I | CCWGG | 1 cut(s) | 53 |
| BfuAI | ACCTGC | 2 cut(s) | 23, 321 |
| Bme1390I | CCNGG | 1 cut(s) | 53 |
| Bme18I | GGWCC | 1 cut(s) | 314 |
| BmgT120I | GGNCC | 1 cut(s) | 314 |
| BmrFI | CCNGG | 1 cut(s) | 53 |
| BmsI | GCATC | 1 cut(s) | 41 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 311, 323 |
| BseBI | CCWGG | 1 cut(s) | 53 |
| BseGI | GGATG | 1 cut(s) | 293 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 311, 323 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 311, 323 |
| BsmI | GAATGC | 1 cut(s) | 18 |
| Bsp1407I | TGTACA | 2 cut(s) | 142, 238 |
| Bsp143I | GATC | 2 cut(s) | 91, 187 |
| BspMI | ACCTGC | 2 cut(s) | 23, 321 |
| BsrGI | TGTACA | 2 cut(s) | 142, 238 |
| BssMI | GATC | 2 cut(s) | 91, 187 |
| Bst2UI | CCWGG | 1 cut(s) | 53 |
| Bst4CI | ACNGT | 2 cut(s) | 59, 149 |
| Bst6I | CTCTTC | 1 cut(s) | 250 |
| BstAUI | TGTACA | 2 cut(s) | 142, 238 |
| BstC8I | GCNNGC | 2 cut(s) | 130, 226 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 321 |
| BstF5I | GGATG | 1 cut(s) | 293 |
| BstKTI | GATC | 2 cut(s) | 94, 190 |
| BstMBI | GATC | 2 cut(s) | 91, 187 |
| BstNI | CCWGG | 1 cut(s) | 53 |
| BstSCI | CCNGG | 1 cut(s) | 51 |
| BtsCI | GGATG | 1 cut(s) | 293 |
| BtsIMutI | CAGTG | 1 cut(s) | 145 |
| BveI | ACCTGC | 2 cut(s) | 23, 321 |
| Cac8I | GCNNGC | 2 cut(s) | 130, 226 |
| Cfr13I | GGNCC | 1 cut(s) | 314 |
| Csp6I | GTAC | 5 cut(s) | 76, 143, 172, 239, 267 |
| CviJI | RGCY | 2 cut(s) | 132, 228 |
| CviKI_1 | RGCY | 2 cut(s) | 132, 228 |
| CviQI | GTAC | 5 cut(s) | 76, 143, 172, 239, 267 |
| DpnI | GATC | 2 cut(s) | 93, 189 |
| DpnII | GATC | 2 cut(s) | 91, 187 |
| Eam1104I | CTCTTC | 1 cut(s) | 250 |
| EarI | CTCTTC | 1 cut(s) | 250 |
| Eco47I | GGWCC | 1 cut(s) | 314 |
| Eco57I | CTGAAG | 1 cut(s) | 92 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 321 |
| EcoRII | CCWGG | 1 cut(s) | 51 |
| EcoT22I | ATGCAT | 1 cut(s) | 34 |
| FokI | GGATG | 1 cut(s) | 280 |
| HindIII | AAGCTT | 2 cut(s) | 130, 226 |
| Hpy166II | GTNNAC | 2 cut(s) | 145, 241 |
| Hpy188I | TCNGA | 3 cut(s) | 87, 168, 183 |
| Hpy188III | TCNNGA | 2 cut(s) | 41, 70 |
| Hpy8I | GTNNAC | 2 cut(s) | 145, 241 |
| HpyCH4III | ACNGT | 2 cut(s) | 59, 149 |
| HpyCH4V | TGCA | 7 cut(s) | 18, 32, 105, 128, 201, 224, 330 |
| Kzo9I | GATC | 2 cut(s) | 91, 187 |
| LpnPI | CCDG | 6 cut(s) | 28, 38, 65, 83, 309, 316 |
| LweI | GCATC | 1 cut(s) | 41 |
| MalI | GATC | 2 cut(s) | 93, 189 |
| MboI | GATC | 2 cut(s) | 91, 187 |
| MboII | GAAGA | 2 cut(s) | 56, 237 |
| MluCI | AATT | 5 cut(s) | 112, 118, 208, 214, 278 |
| MnlI | CCTC | 1 cut(s) | 327 |
| Mph1103I | ATGCAT | 1 cut(s) | 34 |
| MslI | CAYNNNNRTG | 1 cut(s) | 27 |
| MspR9I | CCNGG | 1 cut(s) | 53 |
| Mva1269I | GAATGC | 1 cut(s) | 18 |
| MvaI | CCWGG | 1 cut(s) | 53 |
| NdeII | GATC | 2 cut(s) | 91, 187 |
| NsiI | ATGCAT | 1 cut(s) | 34 |
| PctI | GAATGC | 1 cut(s) | 18 |
| Psp6I | CCWGG | 1 cut(s) | 51 |
| PspGI | CCWGG | 1 cut(s) | 51 |
| PspPI | GGNCC | 1 cut(s) | 314 |
| RsaI | GTAC | 5 cut(s) | 77, 144, 173, 240, 268 |
| RsaNI | GTAC | 5 cut(s) | 76, 143, 172, 239, 267 |
| RseI | CAYNNNNRTG | 1 cut(s) | 27 |
| Sau3AI | GATC | 2 cut(s) | 91, 187 |
| Sau96I | GGNCC | 1 cut(s) | 314 |
| ScrFI | CCNGG | 1 cut(s) | 53 |
| SetI | ASST | 5 cut(s) | 17, 134, 230, 328, 335 |
| SfaNI | GCATC | 1 cut(s) | 41 |
| SgeI | CNNG | 9 cut(s) | 27, 53, 64, 65, 82, 109, 141, 205, 237 |
| SinI | GGWCC | 1 cut(s) | 314 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 27 |
| Sse9I | AATT | 5 cut(s) | 112, 118, 208, 214, 278 |
| SspI | AATATT | 1 cut(s) | 301 |
| StyD4I | CCNGG | 1 cut(s) | 51 |
| TaaI | ACNGT | 2 cut(s) | 59, 149 |
| TaqI | TCGA | 1 cut(s) | 42 |
| TasI | AATT | 5 cut(s) | 112, 118, 208, 214, 278 |
| TatI | WGTACW | 4 cut(s) | 142, 171, 238, 266 |
| TscAI | CASTG | 1 cut(s) | 152 |
| TspDTI | ATGAA | 2 cut(s) | 11, 272 |
| TspRI | CASTG | 1 cut(s) | 152 |
| VpaK11BI | GGWCC | 1 cut(s) | 314 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 321 |
| XapI | RAATTY | 3 cut(s) | 118, 214, 278 |
| Zsp2I | ATGCAT | 1 cut(s) | 34 |