Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013786

Physical Location & Seq

Genomic Coordinates Reverse (-)

50683814 .. 50686578

Gene Structure 2765 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ32801

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGCCTCTAATCCCTATCTCTTTCTTTTGTCTCCAGCAACCTTTTTTTCCCTCGGCCCCCAAAACCCAACATTGCCTGCCCCATAGCTTGGCCACACGTGAATCTGAGAGATCTCTCTCTCTCTCTCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCTTCCACCATGGGCAACTGTTGCTCTCAACGCAACACCGAGGATGCCCCCAACGATGTAAAGGGAGACAACAATGGTGGCCTGGATAACAATGCCGATGTGACAAACAATTCTCCAGGCAACCATAATCCAGCTCCCCAGGGTCACAAGGCTCCTCCTGCATCCCCTCCACCTGGGGGAAAGCCTGCGAAAACAGGGCCTATTGGACCTGTTCTAGGGAGGCCAATGGAGGATGTGCGTTCGACCTACTCTATCGGAAAGGAGCTGGGGCGGGGACAGTTTGGGGTGACGCACCTGTGCACACATAAACAGACGGGAGAGCAGTTTGCGTGCAAAACCATAGCCAAACGCAAGCTGGTGAATAAGGAAGACATAGAGGACGTGAGGAGGGAGGTTCAAATCATGCACCATTTGACCGGACAACTAAACATCGTGGAACTCAAGGGAGCTTATGAGGATAAGCAGTCCGTTCACCTGGTGATGGAGCTGTGTGCCGGTGGGGAGCTTTTTGACCGAATCATCTCTAAGGGGCATTACACGGAGCGTGCTGCAGCTGCCTTGTTAAGGACCATTGTTCAGATCGTGCACACCTGCCATTCCATGGGGGTCATCCATAGGGATCTCAAGCCTGAGAATTTCCTTCTGCTCAACAAAGACGAGAACTCTCCACTCAAGGCTACAGATTTCGGTCTATCAGTCTTTTACAAACAAGGAGAGGTGTTCAAGGATATTGTTGGCAGCGCATATTACATAGCACCAGAGGTGTTGAAGAGGAGATATGGACCAGAAGTCGATATATGGAGTGTTGGAGTCATGCTATACATTCTTTTGAGTGGTGTTCCTCCTTTCTGGGCAGAATCGGAACATGGGATATTCAACGCAATATTACGTGGTCACCTCGACTTTTCAAGCGACCCATGGCCTGCAATATCGGCTCAAGCAAAGGATCTTGTGAGGAAGATGTTGAATTCAGATCCCAAGCAGAGATTGACAGCCTTCCAAGTTCTAAGTCATCCATGGATCAAGGAGGATGGTGAAGCACCAGATGTTCCTCTCGACAATGCTGTGCTCAGCAGGCTCAAACAGTTCAAAGCAATGAATCAGTTTAAGAAAGTTGCCCTTCGGGTTATCGCCGGTTGCTTATCAGAGGAAGAGATCATGGGATTGAAAGAGATGTTCAAGAGCATAGATACAGACAACAGTGGGACTATCACACTTGAAGAGCTCAAGCAAGGTCTTGCTAAGCAAGGCACCAAGTTATCTGAACACGAAGCTAAACAACTAATGGAAGCTGCCGATGCTGATGGGAACGGAACCATAGACTATGATGAGTTCATCACTGCAACGATGCACTTGAACAGAATGGATAGAGAAGAGCATCTCTACACTGCCTTCCAGCACTTCGATAAAGATAGCAGCGGGTTTATCACGACTGAAGAGCTAGAGTCAGCCCTCCGCGACTACGGGATGCATGATGGAAGGGACATAAGAGAAATCATTGCTGAAGTCGACGCTGATAATGACGGTCGAATCAACTACGATGAATTTGTGGCAATGATGAGAAAAGGAAACCCAGAACCAAACCTGAAAAAGCGGCGGGACGATGTATTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010769 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022603 GO:0022604 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045595 GO:0046777 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051510 GO:0051716 GO:0060284 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080092 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 Pkinase

Protein Analysis

593

Amino Acids

65.96

Weight (kDa)

5.86

Isoelectric Point (pI)

46.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	138 - 396	2e-77	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	140 - 390	2.8e-27	Protein tyrosine and serine/threonine kinase
EF-hand_7	PF13499	444 - 504	1.6e-15	EF-hand domain pair
EF-hand_1	PF00036	444 - 470	2e-07	EF hand domain
EF-hand_6	PF13405	444 - 470	1.5e-06	EF-hand domain
EF-hand_1	PF00036	479 - 506	9.6e-06	EF hand domain
EF-hand_7	PF13499	513 - 576	9.1e-17	EF-hand domain pair
EF-hand_6	PF13405	516 - 544	3.1e-06	EF-hand domain
EF-hand_1	PF00036	550 - 577	1.7e-08	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0013786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12180 AT5G19360
fragaria_vesca	FvH4_3g27800
malus_domestica	MD03G1165100.v1.1 MD11G1184100.v1.1
prunus_persica	Prupe.4G263600_v2.0.a1
pyrus_communis	pycom12g08860
rosa_chinensis	RchiOBHm_Chr5g0050441
rosa_laevigata	RLG00000034702
rosa_multiflora	Rmu_co8347277.1_g000001 Rmu_sc0003202.1_g000003
rosa_roxburghii	Rroxscaffold_1G00030430
rosa_rugosa	Rorug05G0261000
rosa_samantha	Rh5AG332700 Rh5CG370000 Rh5DG355500
rosa_wichuraiana	Rw5G031440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	764
Acc36I	ACCTGC	1 cut(s)	764
AccB1I	GGYRCC	1 cut(s)	1415
AccB7I	CCANNNNNTGG	2 cut(s)	88, 766
AccI	GTMKAC	1 cut(s)	1674
AccII	CGCG	1 cut(s)	1623
AciI	CCGC	5 cut(s)	436, 1584, 1621, 1759, 1762
AclWI	GGATC	4 cut(s)	792, 1119, 1133, 1193
AcoI	YGGCCR	1 cut(s)	90
AcsI	RAATTY	3 cut(s)	799, 1132, 1709
AcuI	CTGAAG	2 cut(s)	1620, 1689
AcvI	CACGTG	1 cut(s)	98
AdeI	CACNNNGTG	1 cut(s)	643
AfiI	CCNNNNNNNGG	7 cut(s)	88, 338, 341, 380, 646, 729, 766
AflIII	ACRYGT	1 cut(s)	95
AhdI	GACNNNNNGTC	1 cut(s)	953
AjiI	CACGTC	1 cut(s)	547
AjnI	CCWGG	5 cut(s)	246, 280, 303, 337, 639
Alw21I	GWGCWC	4 cut(s)	467, 753, 1236, 1392
Alw26I	GTCTC	2 cut(s)	35, 225
Alw44I	GTGCAC	2 cut(s)	463, 749
AlwI	GGATC	4 cut(s)	792, 1119, 1133, 1193
AoxI	GGCC	6 cut(s)	54, 90, 244, 362, 386, 1085
ApaLI	GTGCAC	2 cut(s)	463, 749
ApeKI	GCWGC	6 cut(s)	713, 716, 719, 903, 1457, 1581
ApoI	RAATTY	3 cut(s)	799, 1132, 1709
ArsI	GACNNNNNNTTYG	1 cut(s)	1757
AspLEI	GCGC	1 cut(s)	908
AspS9I	GGNCC	5 cut(s)	55, 362, 371, 732, 947
AsuHPI	GGTGA	6 cut(s)	463, 535, 629, 655, 1052, 1211
AvaII	GGWCC	3 cut(s)	371, 732, 947
BaeGI	GKGCMC	2 cut(s)	467, 753
BalI	TGGCCA	1 cut(s)	92
BanI	GGYRCC	1 cut(s)	1415
BanII	GRGCYC	1 cut(s)	1392
BbrPI	CACGTG	1 cut(s)	98
BbsI	GAAGAC	1 cut(s)	540
Bbv12I	GWGCWC	4 cut(s)	467, 753, 1236, 1392
BbvI	GCAGC	6 cut(s)	700, 706, 728, 915, 1444, 1593
BccI	CCATC	4 cut(s)	640, 1190, 1463, 1634
BciT130I	CCWGG	5 cut(s)	248, 282, 305, 339, 641
BcoDI	GTCTC	2 cut(s)	35, 225
BfaI	CTAG	2 cut(s)	380, 1607
BfmI	CTRYAG	2 cut(s)	714, 843
BfuAI	ACCTGC	1 cut(s)	764
BglII	AGATCT	1 cut(s)	110
BisI	GCNGC	7 cut(s)	714, 717, 720, 904, 1458, 1582, 1760
BlpI	GCTNAGC	2 cut(s)	1235, 1407
BlsI	GCNGC	7 cut(s)	715, 718, 721, 905, 1459, 1583, 1761
Bme1390I	CCNGG	5 cut(s)	248, 282, 305, 339, 641
Bme18I	GGWCC	3 cut(s)	371, 732, 947
BmeRI	GACNNNNNGTC	1 cut(s)	953
BmgBI	CACGTC	1 cut(s)	547
BmgT120I	GGNCC	5 cut(s)	55, 362, 371, 732, 947
BmiI	GGNNCC	4 cut(s)	57, 318, 1417, 1480
BmrFI	CCNGG	5 cut(s)	248, 282, 305, 339, 641
BmsI	GCATC	6 cut(s)	199, 335, 1453, 1503, 1552, 1623
BpiI	GAAGAC	1 cut(s)	540
BpmI	CTGGAG	2 cut(s)	17, 264
Bpu1102I	GCTNAGC	2 cut(s)	1235, 1407
BpuEI	CTTGAG	5 cut(s)	590, 773, 821, 1086, 1376
BsaAI	YACGTR	2 cut(s)	98, 1055
BsaJI	CCNNGG	9 cut(s)	51, 174, 204, 303, 304, 338, 765, 1082, 1181
BsaWI	WCCGGW	1 cut(s)	581
Bsc4I	CCNNNNNNNGG	7 cut(s)	88, 338, 341, 380, 646, 729, 766
Bse118I	RCCGGY	2 cut(s)	659, 1298
Bse3DI	GCAATG	4 cut(s)	70, 1266, 1662, 1725
BseBI	CCWGG	5 cut(s)	248, 282, 305, 339, 641
BseDI	CCNNGG	9 cut(s)	51, 174, 204, 303, 304, 338, 765, 1082, 1181
BseGI	GGATG	7 cut(s)	214, 326, 403, 774, 1177, 1201, 1638
BseLI	CCNNNNNNNGG	7 cut(s)	88, 338, 341, 380, 646, 729, 766
BseMI	GCAATG	4 cut(s)	70, 1266, 1662, 1725
BseMII	CTCAG	3 cut(s)	96, 786, 1249
BseRI	GAGGAG	3 cut(s)	309, 565, 952
BseSI	GKGCMC	2 cut(s)	467, 753
BseXI	GCAGC	6 cut(s)	700, 706, 728, 915, 1444, 1593
BseYI	CCCAGC	1 cut(s)	430
Bsh1236I	CGCG	1 cut(s)	1623
Bsh1285I	CGRYCG	1 cut(s)	1693
BshFI	GGCC	6 cut(s)	56, 92, 246, 364, 388, 1087
BshNI	GGYRCC	1 cut(s)	1415
BsiEI	CGRYCG	1 cut(s)	1693
BsiHKAI	GWGCWC	4 cut(s)	467, 753, 1236, 1392
BsiSI	CCGG	3 cut(s)	582, 660, 1299
BslFI	GGGAC	4 cut(s)	453, 1384, 1661, 1778
BslI	CCNNNNNNNGG	7 cut(s)	88, 338, 341, 380, 646, 729, 766
BsmAI	GTCTC	2 cut(s)	35, 225
BsmFI	GGGAC	4 cut(s)	453, 1384, 1661, 1778
BsnI	GGCC	6 cut(s)	56, 92, 246, 364, 388, 1087
Bsp1286I	GDGCHC	4 cut(s)	467, 753, 1236, 1392
Bsp143I	GATC	7 cut(s)	110, 744, 784, 1111, 1138, 1185, 1320
Bsp1720I	GCTNAGC	2 cut(s)	1235, 1407
Bsp19I	CCATGG	4 cut(s)	174, 765, 1082, 1181
BspACI	CCGC	5 cut(s)	436, 1584, 1621, 1759, 1762
BspANI	GGCC	6 cut(s)	56, 92, 246, 364, 388, 1087
BspCNI	CTCAG	3 cut(s)	97, 787, 1248
BspFNI	CGCG	1 cut(s)	1623
BspLI	GGNNCC	4 cut(s)	57, 318, 1417, 1480
BspMAI	CTGCAG	1 cut(s)	718
BspMI	ACCTGC	1 cut(s)	764
BspPI	GGATC	4 cut(s)	792, 1119, 1133, 1193
BspQI	GCTCTTC	4 cut(s)	172, 1380, 1533, 1596
BspT107I	GGYRCC	1 cut(s)	1415
BsrDI	GCAATG	4 cut(s)	70, 1266, 1662, 1725
BsrFI	RCCGGY	2 cut(s)	659, 1298
BssAI	RCCGGY	2 cut(s)	659, 1298
BssECI	CCNNGG	9 cut(s)	51, 174, 204, 303, 304, 338, 765, 1082, 1181
BssMI	GATC	7 cut(s)	110, 744, 784, 1111, 1138, 1185, 1320
BssT1I	CCWWGG	4 cut(s)	174, 765, 1082, 1181
Bst2UI	CCWGG	5 cut(s)	248, 282, 305, 339, 641
Bst4CI	ACNGT	5 cut(s)	185, 444, 1251, 1367, 1691
Bst6I	CTCTTC	6 cut(s)	172, 929, 1311, 1380, 1533, 1596
BstAPI	GCANNNNNTGC	1 cut(s)	186
BstBAI	YACGTR	2 cut(s)	98, 1055
BstC8I	GCNNGC	7 cut(s)	77, 351, 496, 518, 711, 1089, 1241
BstDEI	CTNAG	6 cut(s)	105, 690, 795, 1172, 1235, 1407
BstDSI	CCRYGG	4 cut(s)	174, 765, 1082, 1181
BstEII	GGTNACC	1 cut(s)	1058
BstENI	CCTNNNNNAGG	2 cut(s)	378, 727
BstF5I	GGATG	7 cut(s)	214, 326, 403, 774, 1177, 1201, 1638
BstFNI	CGCG	1 cut(s)	1623
BstHHI	GCGC	1 cut(s)	908
BstKTI	GATC	7 cut(s)	113, 747, 787, 1114, 1141, 1188, 1323
BstMAI	GTCTC	2 cut(s)	35, 225
BstMBI	GATC	7 cut(s)	110, 744, 784, 1111, 1138, 1185, 1320
BstMCI	CGRYCG	1 cut(s)	1693
BstMWI	GCNNNNNNNGC	7 cut(s)	186, 195, 323, 719, 1097, 1240, 1463
BstNI	CCWGG	5 cut(s)	248, 282, 305, 339, 641
BstPI	GGTNACC	1 cut(s)	1058
BstSCI	CCNGG	5 cut(s)	246, 280, 303, 337, 639
BstSFI	CTRYAG	2 cut(s)	714, 843
BstSLI	GKGCMC	2 cut(s)	467, 753
BstUI	CGCG	1 cut(s)	1623
BstV1I	GCAGC	6 cut(s)	700, 706, 728, 915, 1444, 1593
BstV2I	GAAGAC	1 cut(s)	540
BstX2I	RGATCY	4 cut(s)	110, 784, 1111, 1138
BstYI	RGATCY	4 cut(s)	110, 784, 1111, 1138
BsuRI	GGCC	6 cut(s)	56, 92, 246, 364, 388, 1087
BtgI	CCRYGG	4 cut(s)	174, 765, 1082, 1181
BtrI	CACGTC	1 cut(s)	547
BtsCI	GGATG	7 cut(s)	214, 326, 403, 774, 1177, 1201, 1638
BtsI	GCAGTG	2 cut(s)	1503, 1551
BtsIMutI	CAGTG	3 cut(s)	1372, 1503, 1551
BveI	ACCTGC	1 cut(s)	764
Cac8I	GCNNGC	7 cut(s)	77, 351, 496, 518, 711, 1089, 1241
CfoI	GCGC	1 cut(s)	908
Cfr10I	RCCGGY	2 cut(s)	659, 1298
Cfr13I	GGNCC	5 cut(s)	55, 362, 371, 732, 947
CseI	GACGC	2 cut(s)	463, 1685
CsiI	ACCWGGT	1 cut(s)	639
CspCI	CAANNNNNGTGG	2 cut(s)	223, 258
CviAII	CATG	9 cut(s)	175, 568, 766, 979, 1031, 1083, 1182, 1324, 1637
DdeI	CTNAG	6 cut(s)	105, 690, 795, 1172, 1235, 1407
DpnI	GATC	7 cut(s)	112, 746, 786, 1113, 1140, 1187, 1322
DpnII	GATC	7 cut(s)	110, 744, 784, 1111, 1138, 1185, 1320
DraIII	CACNNNGTG	1 cut(s)	643
DriI	GACNNNNNGTC	1 cut(s)	953
EaeI	YGGCCR	1 cut(s)	90
Eam1104I	CTCTTC	6 cut(s)	172, 929, 1311, 1380, 1533, 1596
Eam1105I	GACNNNNNGTC	1 cut(s)	953
EarI	CTCTTC	6 cut(s)	172, 929, 1311, 1380, 1533, 1596
Ecl136II	GAGCTC	1 cut(s)	1390
Eco130I	CCWWGG	4 cut(s)	174, 765, 1082, 1181
Eco24I	GRGCYC	1 cut(s)	1392
Eco47I	GGWCC	3 cut(s)	371, 732, 947
Eco53kI	GAGCTC	1 cut(s)	1390
Eco57I	CTGAAG	2 cut(s)	1620, 1689
Eco72I	CACGTG	1 cut(s)	98
Eco91I	GGTNACC	1 cut(s)	1058
EcoICRI	GAGCTC	1 cut(s)	1390
EcoNI	CCTNNNNNAGG	2 cut(s)	378, 727
EcoO109I	RGGNCCY	1 cut(s)	362
EcoO65I	GGTNACC	1 cut(s)	1058
EcoRI	GAATTC	1 cut(s)	1132
EcoRII	CCWGG	5 cut(s)	246, 280, 303, 337, 639
EcoT14I	CCWWGG	4 cut(s)	174, 765, 1082, 1181
EcoT22I	ATGCAT	1 cut(s)	1638
EcoT38I	GRGCYC	1 cut(s)	1392
ErhI	CCWWGG	4 cut(s)	174, 765, 1082, 1181
FaeI	CATG	9 cut(s)	178, 571, 769, 982, 1034, 1086, 1185, 1327, 1640
FalI	AAGNNNNNCTT	2 cut(s)	1269, 1301
FaqI	GGGAC	4 cut(s)	453, 1384, 1661, 1778
FatI	CATG	9 cut(s)	174, 567, 765, 978, 1030, 1082, 1181, 1323, 1636
FauI	CCCGC	3 cut(s)	429, 1577, 1755
FblI	GTMKAC	1 cut(s)	1674
Fnu4HI	GCNGC	7 cut(s)	714, 717, 720, 904, 1458, 1582, 1760
FokI	GGATG	7 cut(s)	221, 313, 410, 761, 1164, 1208, 1645
FriOI	GRGCYC	1 cut(s)	1392
Fsp4HI	GCNGC	7 cut(s)	714, 717, 720, 904, 1458, 1582, 1760
FspBI	CTAG	2 cut(s)	380, 1607
GlaI	GCGC	1 cut(s)	907
GluI	GCNGC	7 cut(s)	714, 717, 720, 904, 1458, 1582, 1760
GsaI	CCCAGC	1 cut(s)	434
GsuI	CTGGAG	2 cut(s)	17, 264
HaeIII	GGCC	6 cut(s)	56, 92, 246, 364, 388, 1087
HapII	CCGG	3 cut(s)	582, 660, 1299
HgaI	GACGC	2 cut(s)	463, 1685
HhaI	GCGC	1 cut(s)	908
Hin1II	CATG	9 cut(s)	178, 571, 769, 982, 1034, 1086, 1185, 1327, 1640
Hin6I	GCGC	1 cut(s)	906
HinP1I	GCGC	1 cut(s)	906
HincII	GTYRAC	1 cut(s)	1675
HindII	GTYRAC	1 cut(s)	1675
HinfI	GANTC	7 cut(s)	101, 681, 975, 1022, 1264, 1610, 1695
HpaII	CCGG	3 cut(s)	582, 660, 1299
HphI	GGTGA	6 cut(s)	463, 535, 629, 655, 1052, 1211
Hpy166II	GTNNAC	4 cut(s)	465, 637, 751, 1675
Hpy188I	TCNGA	7 cut(s)	106, 422, 744, 1027, 1138, 1312, 1429
Hpy188III	TCNNGA	3 cut(s)	1220, 1345, 1594
Hpy8I	GTNNAC	4 cut(s)	465, 637, 751, 1675
Hpy99I	CGWCG	1 cut(s)	1679
HpyAV	CCTTC	5 cut(s)	815, 1171, 1295, 1567, 1638
HpyCH4III	ACNGT	5 cut(s)	185, 444, 1251, 1367, 1691
HpyCH4IV	ACGT	3 cut(s)	97, 546, 1054
HpyF10VI	GCNNNNNNNGC	7 cut(s)	186, 195, 323, 719, 1097, 1240, 1463
HpyF3I	CTNAG	6 cut(s)	105, 690, 795, 1172, 1235, 1407
HpySE526I	ACGT	3 cut(s)	97, 546, 1054
Hsp92II	CATG	9 cut(s)	178, 571, 769, 982, 1034, 1086, 1185, 1327, 1640
HspAI	GCGC	1 cut(s)	906
Kzo9I	GATC	7 cut(s)	110, 744, 784, 1111, 1138, 1185, 1320
LguI	GCTCTTC	4 cut(s)	172, 1380, 1533, 1596
LmnI	GCTCC	7 cut(s)	304, 322, 427, 611, 649, 667, 706
Lsp1109I	GCAGC	6 cut(s)	700, 706, 728, 915, 1444, 1593
LweI	GCATC	6 cut(s)	199, 335, 1453, 1503, 1552, 1623
MabI	ACCWGGT	1 cut(s)	639
MaeI	CTAG	2 cut(s)	380, 1607
MaeII	ACGT	3 cut(s)	97, 546, 1054
MaeIII	GTNAC	4 cut(s)	265, 308, 451, 1058
MalI	GATC	7 cut(s)	112, 746, 786, 1113, 1140, 1187, 1322
MboI	GATC	7 cut(s)	110, 744, 784, 1111, 1138, 1185, 1320
MboII	GAAGA	8 cut(s)	159, 545, 946, 1135, 1328, 1397, 1550, 1613
MflI	RGATCY	4 cut(s)	110, 784, 1111, 1138
MhlI	GDGCHC	4 cut(s)	467, 753, 1236, 1392
MlsI	TGGCCA	1 cut(s)	92
MluCI	AATT	4 cut(s)	274, 799, 1132, 1709
MluNI	TGGCCA	1 cut(s)	92
MlyI	GAGTC	2 cut(s)	984, 1619
MmeI	TCCRAC	1 cut(s)	952
Mox20I	TGGCCA	1 cut(s)	92
Mph1103I	ATGCAT	1 cut(s)	1638
MscI	TGGCCA	1 cut(s)	92
MseI	TTAA	2 cut(s)	728, 1272
Msp20I	TGGCCA	1 cut(s)	92
MspA1I	CMGCKG	2 cut(s)	719, 1584
MspI	CCGG	3 cut(s)	582, 660, 1299
MspR9I	CCNGG	5 cut(s)	248, 282, 305, 339, 641
MvaI	CCWGG	5 cut(s)	248, 282, 305, 339, 641
MvnI	CGCG	1 cut(s)	1623
MwoI	GCNNNNNNNGC	7 cut(s)	186, 195, 323, 719, 1097, 1240, 1463
NcoI	CCATGG	4 cut(s)	174, 765, 1082, 1181
NdeII	GATC	7 cut(s)	110, 744, 784, 1111, 1138, 1185, 1320
NlaIII	CATG	9 cut(s)	178, 571, 769, 982, 1034, 1086, 1185, 1327, 1640
NlaIV	GGNNCC	4 cut(s)	57, 318, 1417, 1480
NmeAIII	GCCGAG	1 cut(s)	32
NmuCI	GTSAC	4 cut(s)	265, 308, 451, 1058
NsiI	ATGCAT	1 cut(s)	1638
PaqCI	CACCTGC	1 cut(s)	764
PasI	CCCWGGG	1 cut(s)	304
PciSI	GCTCTTC	4 cut(s)	172, 1380, 1533, 1596
PfeI	GAWTC	5 cut(s)	101, 681, 1022, 1264, 1695
PflMI	CCANNNNNTGG	2 cut(s)	88, 766
PkrI	GCNGC	7 cut(s)	715, 718, 721, 905, 1459, 1583, 1761
PleI	GAGTC	2 cut(s)	983, 1618
PmaCI	CACGTG	1 cut(s)	98
PmlI	CACGTG	1 cut(s)	98
PpsI	GAGTC	2 cut(s)	983, 1618
Ppu21I	YACGTR	2 cut(s)	98, 1055
Psp124BI	GAGCTC	1 cut(s)	1392
Psp6I	CCWGG	5 cut(s)	246, 280, 303, 337, 639
PspCI	CACGTG	1 cut(s)	98
PspEI	GGTNACC	1 cut(s)	1058
PspFI	CCCAGC	1 cut(s)	430
PspGI	CCWGG	5 cut(s)	246, 280, 303, 337, 639
PspN4I	GGNNCC	4 cut(s)	57, 318, 1417, 1480
PspPI	GGNCC	5 cut(s)	55, 362, 371, 732, 947
PstI	CTGCAG	1 cut(s)	718
PsuI	RGATCY	4 cut(s)	110, 784, 1111, 1138
PvuII	CAGCTG	1 cut(s)	719
SacI	GAGCTC	1 cut(s)	1392
SalI	GTCGAC	1 cut(s)	1673
SapI	GCTCTTC	4 cut(s)	172, 1380, 1533, 1596
SaqAI	TTAA	2 cut(s)	728, 1272
SatI	GCNGC	7 cut(s)	714, 717, 720, 904, 1458, 1582, 1760
Sau3AI	GATC	7 cut(s)	110, 744, 784, 1111, 1138, 1185, 1320
Sau96I	GGNCC	5 cut(s)	55, 362, 371, 732, 947
SchI	GAGTC	2 cut(s)	984, 1619
ScrFI	CCNGG	5 cut(s)	248, 282, 305, 339, 641
SduI	GDGCHC	4 cut(s)	467, 753, 1236, 1392
SexAI	ACCWGGT	1 cut(s)	639
SfaNI	GCATC	6 cut(s)	199, 335, 1453, 1503, 1552, 1623
SfcI	CTRYAG	2 cut(s)	714, 843
SinI	GGWCC	3 cut(s)	371, 732, 947
SmlI	CTYRAG	5 cut(s)	605, 788, 836, 1101, 1391
SmoI	CTYRAG	5 cut(s)	605, 788, 836, 1101, 1391
Sse9I	AATT	4 cut(s)	274, 799, 1132, 1709
SsiI	CCGC	5 cut(s)	436, 1584, 1621, 1759, 1762
SspI	AATATT	1 cut(s)	1050
SspMI	CTAG	2 cut(s)	380, 1607
SstI	GAGCTC	1 cut(s)	1392
StyD4I	CCNGG	5 cut(s)	246, 280, 303, 337, 639
StyI	CCWWGG	4 cut(s)	174, 765, 1082, 1181
TaaI	ACNGT	5 cut(s)	185, 444, 1251, 1367, 1691
TaiI	ACGT	3 cut(s)	100, 549, 1057
TaqI	TCGA	7 cut(s)	407, 957, 1065, 1221, 1569, 1674, 1693
TaqII	GACCGA	2 cut(s)	693, 842
TasI	AATT	4 cut(s)	274, 799, 1132, 1709
TauI	GCSGC	1 cut(s)	1762
TfiI	GAWTC	5 cut(s)	101, 681, 1022, 1264, 1695
Tru1I	TTAA	2 cut(s)	728, 1272
Tru9I	TTAA	2 cut(s)	728, 1272
TscAI	CASTG	3 cut(s)	1372, 1510, 1558
TseFI	GTSAC	4 cut(s)	265, 308, 451, 1058
TseI	GCWGC	6 cut(s)	713, 716, 719, 903, 1457, 1581
Tsp45I	GTSAC	4 cut(s)	265, 308, 451, 1058
TspDTI	ATGAA	3 cut(s)	1277, 1489, 1722
TspGWI	ACGGA	3 cut(s)	622, 719, 1491
TspRI	CASTG	3 cut(s)	1372, 1510, 1558
Van91I	CCANNNNNTGG	2 cut(s)	88, 766
VneI	GTGCAC	2 cut(s)	463, 749
VpaK11BI	GGWCC	3 cut(s)	371, 732, 947
XagI	CCTNNNNNAGG	2 cut(s)	378, 727
XapI	RAATTY	3 cut(s)	799, 1132, 1709
XcmI	CCANNNNNNNNNTGG	1 cut(s)	517
XmiI	GTMKAC	1 cut(s)	1674
XspI	CTAG	2 cut(s)	380, 1607
Zsp2I	ATGCAT	1 cut(s)	1638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.