Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0013786

Physical Location & Seq

Genomic Coordinates Reverse (-)

29472803 .. 29475281

Gene Structure 2479 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0261000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGGTTGTCAATCACTCCGGTGACATGAGATCAATCTGGTCAGGAAAACTTCGATTCCTTCTTGCACCAAGACTGTGTCTCTTGATCTTTCTCTTCTGTCCTTCTGCAACTCCATTAAGCTTTACTTTCCCGAGCTTTAATCAAGATGATGATATTGCCAAAATAACTCGAGAAGGAGCCGCTTCTGTTTACACCGAATTTCTCTACCTCACCAAATACGCAGCAGACCAGCAACCGGGTGGAACTGGTCGAGCCACCTACAAGCAACCCTTCCTGCTCCGAGAAAATACCACCGGAAAACTCGCCGATTTCACCACAAATTTTACCTTCTCCATTTATGCGAAAGATGATGCCAATTTAACATGGGGTGCCGGTGATGGACTAGCCTTCTTCTTAGCGCCAGACGGGTCCGAACTCAACAGCTCAGACGACGACGGCTTTGCTCTCGGCCTCCCCAGCAATCGTCGGTACCCATTTGTGGCGGTGGAATTTGATATCTACAAGAACTACGAAACCATCCCCAACACAACTGAAACCGTCGACGACCCATCCGAATCCGGAGATCATGTGGGTATCGACGTCAACACTGTCAAGTCGTTGACTACCACGCCTTGGAATGGTAGTATTATCGATGGACAAAACAATGATGTCCGGATCAGTTACAATTCTAGCACAAAAAATCTTAGCGTTGCCTTCACAACTTTTGTGAAGAATGGTGCCAAAGAGATGAGCTATATTAATCACACAGTCGATCTGAAGGATGTCTTACCGGATCGGGTCATTGTTGGGTTCTCGGCTTCAACAGGTAACGCTTCTGCTATATTTAAGATCGTCTCGTGGAATTTTACTTCAACTCCTCTGGTTGATGAGAATGCCAGGGACAACACTCCGGTAAGTGTACCTTCTGCTCCTGCGCCTAGCCCTATGGCTAGTTCTGATCCCAACTCCGGCAATAAAGGACTAGTTGTTGGGTTGGGGGTTGGTGCAAGTATTATTCTAGTTGGTGGGTTGGCTTTGGTCTGCTTTATCTTTTGGAAGAAGAAAGAAACGACGGACAGTGATGAAGATCCTATCGTTGGTGATGCCACTGACGATGAATTTGAACAAGGGACCGGTCCCAGAAAGTTTTTGTACGGCGATTTAGTCCGGGCAACTGGTAACTTTCAAGAGGAAGAAAAGCTTGGCCAGGGAGGATTTGGTGGGGTTTATAAGGGATTCATAAAGGACTTGAACTCATATGTAGCTGTGAAGAGGATATCCAAAGGATCTAAACAAGGAGTGAAGGAGTACGCAACAGAAGTAAGGATCATAAGTCGACTTAGGCATCGGAATCTGGTGCAACTCATTGGTTGGTGCCACAAGAAAAAAGAACTCCTGCTTGTTTACGAGTTCATGCCCAACGGCAGTTTAGATTCACATTTGTTCAAACAAAGAAGTTTGTTAACTTGGGAGGCCAGGTACAAAATAGCTCAAGGCTTGGCATCGGGGTTGCTTTATCTACACGAAGGATGGGAACAATGCGTTTTGCACAGAGACATCAAATGTAGCAATATCATGTTAGATTCCAACTTCAACGCAAAACTTGGGGATTTTGGGTTAGCTCGGCTTGTGGATCATGGCAAACAATCACAAACAACGGTTTTGGCTGGAACAATGGGCTACATGGCTCCTGAATGTGCTACTACTGGAAAAGCTAGTAAGGAAACAGATGTCTATAGTTTTGGAATCGTTGCTTTGGAGATAGCATGTGGGAGAAAACCGATTGATGTCAATATGGAAAGAGATCAAATCAATATTGTAGAATGGGTTTGGAAGCTTTATGGAGAAGGGAGAGTCATTGAAACAGCCGATCCAAAACTCTGCGGTGATTTTGATGAGAAACAAGTAGAGTGTTTAATCATTGTTGGGTTGTGGTGTGCTCACCCAGACTACGTGATGAGGCCTTCGATACAACAAGCGATTCAAGTACTTAACTTCGAAGTTCCGGTGCCTATTCTTCCATCGAAATTCCCTGTGGCGACCTATTCTGCTTTTGCAGTATCGTTCTCCAAGTTTTCCGACAATAATACTGGTTCAAGTAGAGGTCAAAGCGAGCCTTCTACCAATGGTTATTCCTCACAGTTCACTACATCTTCTACAACAGACTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010769 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022603 GO:0022604 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045595 GO:0046777 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051510 GO:0051716 GO:0060284 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080092 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 Pkinase

Protein Analysis

716

Amino Acids

78.6

Weight (kDa)

5.31

Isoelectric Point (pI)

31.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	39 - 293	2.3e-56	Legume lectin domain
Lectin_L-type_dom	PF18483	58 - 273	9.2e-13	Legume lectin beta-barrel domain
Pkinase	PF00069	388 - 655	1.3e-51	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	390 - 595	4.7e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12180 AT5G19360
fragaria_vesca	FvH4_3g27800
malus_domestica	MD03G1165100.v1.1 MD11G1184100.v1.1
prunus_persica	Prupe.4G263600_v2.0.a1
pyrus_communis	pycom12g08860
rosa_chinensis	RchiOBHm_Chr5g0050441
rosa_laevigata	RLG00000034702
rosa_multiflora	Rmu_co8347277.1_g000001 Rmu_sc0003202.1_g000003
rosa_roxburghii	Rroxscaffold_1G00030430
rosa_rugosa	Rorug05G0261000
rosa_samantha	Rh5AG332700 Rh5CG370000 Rh5DG355500
rosa_wichuraiana	Rw5G031440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1209
AatII	GACGTC	1 cut(s)	582
Acc65I	GGTACC	1 cut(s)	468
AccB1I	GGYRCC	5 cut(s)	368, 468, 716, 1353, 1987
AccB7I	CCANNNNNTGG	1 cut(s)	612
AccI	GTMKAC	2 cut(s)	540, 1315
AccIII	TCCGGA	2 cut(s)	557, 651
AciI	CCGC	3 cut(s)	180, 482, 1863
AclWI	GGATC	8 cut(s)	662, 780, 932, 1061, 1273, 1313, 1620, 1844
AcoI	YGGCCR	1 cut(s)	1183
AcsI	RAATTY	6 cut(s)	197, 319, 488, 841, 1097, 2006
AcuI	CTGAAG	1 cut(s)	776
AcyI	GRCGYC	1 cut(s)	579
AfaI	GTAC	6 cut(s)	470, 900, 1133, 1289, 1460, 1968
AfiI	CCNNNNNNNGG	6 cut(s)	235, 478, 612, 617, 947, 1076
AgeI	ACCGGT	1 cut(s)	1112
AhlI	ACTAGT	1 cut(s)	961
AjnI	CCWGG	3 cut(s)	875, 1185, 1454
AjuI	GAANNNNNNNTTGG	2 cut(s)	1164, 1196
AleI	CACNNNNGTG	1 cut(s)	18
Alw21I	GWGCWC	1 cut(s)	1921
Alw26I	GTCTC	3 cut(s)	83, 838, 1527
AlwI	GGATC	8 cut(s)	662, 780, 932, 1061, 1273, 1313, 1620, 1844
Ama87I	CYCGRG	2 cut(s)	130, 168
Aor13HI	TCCGGA	2 cut(s)	557, 651
AoxI	GGCC	4 cut(s)	448, 1183, 1452, 1940
ApeKI	GCWGC	1 cut(s)	221
ApoI	RAATTY	6 cut(s)	197, 319, 488, 841, 1097, 2006
ArsI	GACNNNNNNTTYG	4 cut(s)	422, 454, 1082, 1114
AseI	ATTAAT	1 cut(s)	738
AsiGI	ACCGGT	1 cut(s)	1112
Asp718I	GGTACC	1 cut(s)	468
AspLEI	GCGC	2 cut(s)	400, 916
AspS9I	GGNCC	3 cut(s)	408, 1110, 1115
AsuC2I	CCSGG	2 cut(s)	237, 1148
AsuHPI	GGTGA	7 cut(s)	32, 202, 304, 386, 1091, 1877, 1913
AsuII	TTCGAA	1 cut(s)	1977
AvaI	CYCGRG	2 cut(s)	130, 168
AvaII	GGWCC	3 cut(s)	408, 1110, 1115
BalI	TGGCCA	1 cut(s)	1185
BanI	GGYRCC	5 cut(s)	368, 468, 716, 1353, 1987
BauI	CACGAG	1 cut(s)	835
Bbv12I	GWGCWC	1 cut(s)	1921
BbvI	GCAGC	1 cut(s)	233
BccI	CCATC	6 cut(s)	371, 524, 556, 626, 1503, 2008
BceAI	ACGGC	3 cut(s)	451, 1150, 1417
BcgI	CGANNNNNNTGC	2 cut(s)	422, 456
BciT130I	CCWGG	3 cut(s)	877, 1187, 1456
BcnI	CCSGG	2 cut(s)	237, 1148
BcoDI	GTCTC	3 cut(s)	83, 838, 1527
BcuI	ACTAGT	1 cut(s)	961
BfaI	CTAG	7 cut(s)	383, 669, 918, 930, 962, 998, 1695
BfmI	CTRYAG	1 cut(s)	1714
BfoI	RGCGCY	1 cut(s)	401
BisI	GCNGC	2 cut(s)	180, 222
BlsI	GCNGC	2 cut(s)	181, 223
BmcAI	AGTACT	1 cut(s)	1968
Bme1390I	CCNGG	5 cut(s)	237, 877, 1148, 1187, 1456
Bme18I	GGWCC	3 cut(s)	408, 1110, 1115
BmeT110I	CYCGRG	2 cut(s)	130, 168
BmgT120I	GGNCC	3 cut(s)	408, 1110, 1115
BmrFI	CCNGG	5 cut(s)	237, 877, 1148, 1187, 1456
BmsI	GCATC	4 cut(s)	340, 1072, 1333, 1490
Bpu14I	TTCGAA	1 cut(s)	1977
BpuEI	CTTGAG	1 cut(s)	1455
BpuMI	CCSGG	2 cut(s)	237, 1148
Bsa29I	ATCGAT	1 cut(s)	630
BsaAI	YACGTR	1 cut(s)	1933
BsaBI	GATNNNNATC	1 cut(s)	1065
BsaHI	GRCGYC	1 cut(s)	579
BsaJI	CCNNGG	3 cut(s)	611, 876, 1186
BsaWI	WCCGGW	8 cut(s)	17, 293, 557, 651, 769, 889, 1112, 1984
BsaXI	ACNNNNNCTCC	6 cut(s)	552, 582, 838, 868, 1442, 1472
Bsc4I	CCNNNNNNNGG	6 cut(s)	235, 478, 612, 617, 947, 1076
Bse118I	RCCGGY	2 cut(s)	371, 1112
Bse1I	ACTGG	4 cut(s)	250, 1159, 1690, 2074
Bse8I	GATNNNNATC	1 cut(s)	1065
BseAI	TCCGGA	2 cut(s)	557, 651
BseBI	CCWGG	3 cut(s)	877, 1187, 1456
BseCI	ATCGAT	1 cut(s)	630
BseDI	CCNNGG	3 cut(s)	611, 876, 1186
BseGI	GGATG	4 cut(s)	516, 548, 766, 1514
BseJI	GATNNNNATC	1 cut(s)	1065
BseLI	CCNNNNNNNGG	6 cut(s)	235, 478, 612, 617, 947, 1076
BseMII	CTCAG	1 cut(s)	438
BseNI	ACTGG	4 cut(s)	250, 1159, 1690, 2074
BseRI	GAGGAG	1 cut(s)	846
BseXI	GCAGC	1 cut(s)	233
BseYI	CCCAGC	1 cut(s)	455
BshFI	GGCC	4 cut(s)	450, 1185, 1454, 1942
BshNI	GGYRCC	5 cut(s)	368, 468, 716, 1353, 1987
BshTI	ACCGGT	1 cut(s)	1112
BshVI	ATCGAT	1 cut(s)	630
BsiHKAI	GWGCWC	1 cut(s)	1921
BsiHKCI	CYCGRG	2 cut(s)	130, 168
BslFI	GGGAC	3 cut(s)	893, 1101, 1123
BslI	CCNNNNNNNGG	6 cut(s)	235, 478, 612, 617, 947, 1076
BsmAI	GTCTC	3 cut(s)	83, 838, 1527
BsmBI	CGTCTC	1 cut(s)	838
BsmFI	GGGAC	3 cut(s)	893, 1101, 1123
BsmI	GAATGC	1 cut(s)	877
BsnI	GGCC	4 cut(s)	450, 1185, 1454, 1942
BsoBI	CYCGRG	2 cut(s)	130, 168
Bsp119I	TTCGAA	1 cut(s)	1977
Bsp1286I	GDGCHC	1 cut(s)	1921
Bsp13I	TCCGGA	2 cut(s)	557, 651
BspACI	CCGC	3 cut(s)	180, 482, 1863
BspANI	GGCC	4 cut(s)	450, 1185, 1454, 1942
BspCNI	CTCAG	1 cut(s)	437
BspDI	ATCGAT	1 cut(s)	630
BspEI	TCCGGA	2 cut(s)	557, 651
BspPI	GGATC	8 cut(s)	662, 780, 932, 1061, 1273, 1313, 1620, 1844
BspT104I	TTCGAA	1 cut(s)	1977
BspT107I	GGYRCC	5 cut(s)	368, 468, 716, 1353, 1987
BsrFI	RCCGGY	2 cut(s)	371, 1112
BsrI	ACTGG	4 cut(s)	250, 1159, 1690, 2074
BssAI	RCCGGY	2 cut(s)	371, 1112
BssECI	CCNNGG	3 cut(s)	611, 876, 1186
BssNI	GRCGYC	1 cut(s)	579
BssSI	CACGAG	1 cut(s)	835
BssT1I	CCWWGG	1 cut(s)	611
Bst2BI	CACGAG	1 cut(s)	835
Bst2UI	CCWGG	3 cut(s)	877, 1187, 1456
Bst4CI	ACNGT	7 cut(s)	75, 538, 589, 748, 1058, 1639, 2121
Bst6I	CTCTTC	2 cut(s)	98, 1244
BstACI	GRCGYC	1 cut(s)	579
BstBAI	YACGTR	1 cut(s)	1933
BstBI	TTCGAA	1 cut(s)	1977
BstC8I	GCNNGC	1 cut(s)	2093
BstDEI	CTNAG	4 cut(s)	394, 424, 683, 1319
BstF5I	GGATG	4 cut(s)	516, 548, 766, 1514
BstH2I	RGCGCY	1 cut(s)	401
BstHHI	GCGC	2 cut(s)	400, 916
BstMAI	GTCTC	3 cut(s)	83, 838, 1527
BstMWI	GCNNNNNNNGC	1 cut(s)	456
BstNI	CCWGG	3 cut(s)	877, 1187, 1456
BstNSI	RCATGY	1 cut(s)	1749
BstSCI	CCNGG	5 cut(s)	235, 875, 1146, 1185, 1454
BstSFI	CTRYAG	1 cut(s)	1714
BstV1I	GCAGC	1 cut(s)	233
BstX2I	RGATCY	2 cut(s)	1066, 1265
BstYI	RGATCY	2 cut(s)	1066, 1265
Bsu15I	ATCGAT	1 cut(s)	630
BsuRI	GGCC	4 cut(s)	450, 1185, 1454, 1942
BsuTUI	ATCGAT	1 cut(s)	630
BtsCI	GGATG	4 cut(s)	516, 548, 766, 1514
BtsIMutI	CAGTG	3 cut(s)	585, 1063, 1086
Cac8I	GCNNGC	1 cut(s)	2093
CfoI	GCGC	2 cut(s)	400, 916
Cfr10I	RCCGGY	2 cut(s)	371, 1112
Cfr13I	GGNCC	3 cut(s)	408, 1110, 1115
ClaI	ATCGAT	1 cut(s)	630
Csp6I	GTAC	6 cut(s)	469, 899, 1132, 1288, 1459, 1967
CspAI	ACCGGT	1 cut(s)	1112
CviAII	CATG	8 cut(s)	25, 363, 566, 1393, 1555, 1616, 1663, 1746
CviQI	GTAC	6 cut(s)	469, 899, 1132, 1288, 1459, 1967
DdeI	CTNAG	4 cut(s)	394, 424, 683, 1319
EaeI	YGGCCR	1 cut(s)	1183
Eam1104I	CTCTTC	2 cut(s)	98, 1244
EarI	CTCTTC	2 cut(s)	98, 1244
Eco130I	CCWWGG	1 cut(s)	611
Eco147I	AGGCCT	1 cut(s)	1942
Eco32I	GATATC	2 cut(s)	496, 1257
Eco47I	GGWCC	3 cut(s)	408, 1110, 1115
Eco57I	CTGAAG	1 cut(s)	776
Eco88I	CYCGRG	2 cut(s)	130, 168
EcoRII	CCWGG	3 cut(s)	875, 1185, 1454
EcoRV	GATATC	2 cut(s)	496, 1257
EcoT14I	CCWWGG	1 cut(s)	611
ErhI	CCWWGG	1 cut(s)	611
Esp3I	CGTCTC	1 cut(s)	838
FaeI	CATG	8 cut(s)	28, 366, 569, 1396, 1558, 1619, 1666, 1749
FaqI	GGGAC	3 cut(s)	893, 1101, 1123
FatI	CATG	8 cut(s)	24, 362, 565, 1392, 1554, 1615, 1662, 1745
FauNDI	CATATG	1 cut(s)	1237
FblI	GTMKAC	2 cut(s)	540, 1315
Fnu4HI	GCNGC	2 cut(s)	180, 222
FokI	GGATG	4 cut(s)	503, 535, 773, 1521
Fsp4HI	GCNGC	2 cut(s)	180, 222
FspBI	CTAG	7 cut(s)	383, 669, 918, 930, 962, 998, 1695
GlaI	GCGC	2 cut(s)	399, 915
GluI	GCNGC	2 cut(s)	180, 222
GsaI	CCCAGC	1 cut(s)	459
HaeII	RGCGCY	1 cut(s)	401
HaeIII	GGCC	4 cut(s)	450, 1185, 1454, 1942
HhaI	GCGC	2 cut(s)	400, 916
Hin1I	GRCGYC	1 cut(s)	579
Hin1II	CATG	8 cut(s)	28, 366, 569, 1396, 1558, 1619, 1666, 1749
Hin6I	GCGC	2 cut(s)	398, 914
HinP1I	GCGC	2 cut(s)	398, 914
HincII	GTYRAC	5 cut(s)	541, 583, 600, 1316, 1443
HindII	GTYRAC	5 cut(s)	541, 583, 600, 1316, 1443
HindIII	AAGCTT	3 cut(s)	118, 1178, 1814
HpaI	GTTAAC	1 cut(s)	1443
HphI	GGTGA	7 cut(s)	32, 202, 304, 386, 1091, 1877, 1913
Hpy166II	GTNNAC	9 cut(s)	190, 541, 583, 600, 899, 1316, 1384, 1443, 2124
Hpy188I	TCNGA	8 cut(s)	281, 412, 427, 553, 756, 937, 1329, 2059
Hpy188III	TCNNGA	9 cut(s)	42, 82, 130, 143, 170, 558, 652, 1166, 1670
Hpy8I	GTNNAC	9 cut(s)	190, 541, 583, 600, 899, 1316, 1384, 1443, 2124
Hpy99I	CGWCG	7 cut(s)	434, 437, 468, 542, 545, 581, 1054
HpyCH4III	ACNGT	7 cut(s)	75, 538, 589, 748, 1058, 1639, 2121
HpyCH4IV	ACGT	2 cut(s)	579, 1932
HpyCH4V	TGCA	6 cut(s)	65, 107, 986, 1339, 1528, 2036
HpyF10VI	GCNNNNNNNGC	1 cut(s)	456
HpyF3I	CTNAG	4 cut(s)	394, 424, 683, 1319
HpySE526I	ACGT	2 cut(s)	579, 1932
Hsp92I	GRCGYC	1 cut(s)	579
Hsp92II	CATG	8 cut(s)	28, 366, 569, 1396, 1558, 1619, 1666, 1749
HspAI	GCGC	2 cut(s)	398, 914
Kpn2I	TCCGGA	2 cut(s)	557, 651
KpnI	GGTACC	1 cut(s)	472
KspAI	GTTAAC	1 cut(s)	1443
LmnI	GCTCC	4 cut(s)	176, 282, 913, 1672
Lsp1109I	GCAGC	1 cut(s)	233
LweI	GCATC	4 cut(s)	340, 1072, 1333, 1490
MaeI	CTAG	7 cut(s)	383, 669, 918, 930, 962, 998, 1695
MaeII	ACGT	2 cut(s)	579, 1932
MaeIII	GTNAC	4 cut(s)	20, 659, 806, 1157
MflI	RGATCY	2 cut(s)	1066, 1265
MhlI	GDGCHC	1 cut(s)	1921
MlsI	TGGCCA	1 cut(s)	1185
MluCI	AATT	8 cut(s)	197, 319, 355, 488, 664, 841, 1097, 2006
MluNI	TGGCCA	1 cut(s)	1185
MlyI	GAGTC	2 cut(s)	1842, 2138
MmeI	TCCRAC	2 cut(s)	1590, 2082
Mox20I	TGGCCA	1 cut(s)	1185
MroI	TCCGGA	2 cut(s)	557, 651
MscI	TGGCCA	1 cut(s)	1185
MseI	TTAA	9 cut(s)	116, 138, 359, 738, 825, 1442, 1895, 1971, 2149
MslI	CAYNNNNRTG	1 cut(s)	18
Msp20I	TGGCCA	1 cut(s)	1185
MspR9I	CCNGG	5 cut(s)	237, 877, 1148, 1187, 1456
Mva1269I	GAATGC	1 cut(s)	877
MvaI	CCWGG	3 cut(s)	877, 1187, 1456
MwoI	GCNNNNNNNGC	1 cut(s)	456
NciI	CCSGG	2 cut(s)	237, 1148
NdeI	CATATG	1 cut(s)	1237
NlaIII	CATG	8 cut(s)	28, 366, 569, 1396, 1558, 1619, 1666, 1749
NmeAIII	GCCGAG	3 cut(s)	426, 773, 1582
NmuCI	GTSAC	1 cut(s)	20
NspI	RCATGY	1 cut(s)	1749
NspV	TTCGAA	1 cut(s)	1977
OliI	CACNNNNGTG	1 cut(s)	18
PaeR7I	CTCGAG	1 cut(s)	168
PceI	AGGCCT	1 cut(s)	1942
PcsI	WCGNNNNNNNCGW	1 cut(s)	549
PctI	GAATGC	1 cut(s)	877
PfeI	GAWTC	8 cut(s)	54, 554, 1215, 1330, 1412, 1562, 1725, 1960
PflFI	GACNNNGTC	1 cut(s)	75
PflMI	CCANNNNNTGG	1 cut(s)	612
PinAI	ACCGGT	1 cut(s)	1112
PkrI	GCNGC	2 cut(s)	181, 223
PleI	GAGTC	2 cut(s)	1841, 2138
PpsI	GAGTC	2 cut(s)	1841, 2138
Ppu21I	YACGTR	1 cut(s)	1933
PshBI	ATTAAT	1 cut(s)	738
PsiI	TTATAA	1 cut(s)	1209
Psp6I	CCWGG	3 cut(s)	875, 1185, 1454
PspFI	CCCAGC	1 cut(s)	455
PspGI	CCWGG	3 cut(s)	875, 1185, 1454
PspPI	GGNCC	3 cut(s)	408, 1110, 1115
PsuI	RGATCY	2 cut(s)	1066, 1265
PsyI	GACNNNGTC	1 cut(s)	75
RsaI	GTAC	6 cut(s)	470, 900, 1133, 1289, 1460, 1968
RsaNI	GTAC	6 cut(s)	469, 899, 1132, 1288, 1459, 1967
RseI	CAYNNNNRTG	1 cut(s)	18
SalI	GTCGAC	2 cut(s)	539, 1314
SaqAI	TTAA	9 cut(s)	116, 138, 359, 738, 825, 1442, 1895, 1971, 2149
SatI	GCNGC	2 cut(s)	180, 222
Sau96I	GGNCC	3 cut(s)	408, 1110, 1115
ScaI	AGTACT	1 cut(s)	1968
SchI	GAGTC	2 cut(s)	1842, 2138
ScrFI	CCNGG	5 cut(s)	237, 877, 1148, 1187, 1456
SduI	GDGCHC	1 cut(s)	1921
SfaNI	GCATC	4 cut(s)	340, 1072, 1333, 1490
SfcI	CTRYAG	1 cut(s)	1714
Sfr274I	CTCGAG	1 cut(s)	168
SfuI	TTCGAA	1 cut(s)	1977
SgrDI	CGTCGACG	1 cut(s)	539
SinI	GGWCC	3 cut(s)	408, 1110, 1115
SlaI	CTCGAG	1 cut(s)	168
SmiMI	CAYNNNNRTG	1 cut(s)	18
SmlI	CTYRAG	2 cut(s)	168, 1470
SmoI	CTYRAG	2 cut(s)	168, 1470
SpeI	ACTAGT	1 cut(s)	961
Sse9I	AATT	8 cut(s)	197, 319, 355, 488, 664, 841, 1097, 2006
SseBI	AGGCCT	1 cut(s)	1942
SsiI	CCGC	3 cut(s)	180, 482, 1863
SspI	AATATT	1 cut(s)	1795
SspMI	CTAG	7 cut(s)	383, 669, 918, 930, 962, 998, 1695
StuI	AGGCCT	1 cut(s)	1942
StyD4I	CCNGG	5 cut(s)	235, 875, 1146, 1185, 1454
StyI	CCWWGG	1 cut(s)	611
TaaI	ACNGT	7 cut(s)	75, 538, 589, 748, 1058, 1639, 2121
TaiI	ACGT	2 cut(s)	582, 1935
TasI	AATT	8 cut(s)	197, 319, 355, 488, 664, 841, 1097, 2006
TatI	WGTACW	1 cut(s)	1966
TauI	GCSGC	1 cut(s)	182
TfiI	GAWTC	8 cut(s)	54, 554, 1215, 1330, 1412, 1562, 1725, 1960
Tru1I	TTAA	9 cut(s)	116, 138, 359, 738, 825, 1442, 1895, 1971, 2149
Tru9I	TTAA	9 cut(s)	116, 138, 359, 738, 825, 1442, 1895, 1971, 2149
TscAI	CASTG	3 cut(s)	592, 1063, 1093
TseFI	GTSAC	1 cut(s)	20
TseI	GCWGC	1 cut(s)	221
Tsp45I	GTSAC	1 cut(s)	20
TspDTI	ATGAA	4 cut(s)	1077, 1110, 1207, 1381
TspGWI	ACGGA	1 cut(s)	1067
TspRI	CASTG	3 cut(s)	592, 1063, 1093
Tth111I	GACNNNGTC	1 cut(s)	75
Van91I	CCANNNNNTGG	1 cut(s)	612
VpaK11BI	GGWCC	3 cut(s)	408, 1110, 1115
VspI	ATTAAT	1 cut(s)	738
XapI	RAATTY	6 cut(s)	197, 319, 488, 841, 1097, 2006
XceI	RCATGY	1 cut(s)	1749
XcmI	CCANNNNNNNNNTGG	2 cut(s)	236, 1193
XhoI	CTCGAG	1 cut(s)	168
XmiI	GTMKAC	2 cut(s)	540, 1315
XspI	CTAG	7 cut(s)	383, 669, 918, 930, 962, 998, 1695
ZraI	GACGTC	1 cut(s)	580
ZrmI	AGTACT	1 cut(s)	1968

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.