Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0013786

Physical Location & Seq

Genomic Coordinates Forward (+)

40037301 .. 40040039

Gene Structure 2739 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00030430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGGGCAACTGTTGCTCTCAACGCAACACCGAGGATGCCCCCAACGATGGTCACAAGGCTCCTCCTGCATCCCCTCCACCTGGGGGAAAGCCAGCGAAAACAGGGCCTATTGGACCTGTTCTAGGGAGGCCAATGGAGGATGTGCGTTCGACCTACGCTATCGGAAAGGAGCTGGGGCGGGGACAGTTTGGGGTGACGCACCTGTGCACACATAAACAGACGGGAGAGCAGTTTGCATGCAAAACCATAGCCAAACGCAAGCTGGTGAATAAGGAAGACATAGAGGACGTGAGGAGGGAGGTTCAAATCATGCACCATTTGACCGGACAACTAAACATCGTGGAACTCAAGGGAGCTTATGAGGATAAGCAGTCCGTTCACCTGGTGATGGAGCTGTGTGCCGGTGGGGAGCTTTTTGACCGAATCATCTCTAAGGGGCATTACACGGAGCGTGCTGCAGCCGCCTTGTTAAGGACCATTGTTCAGATCGTGCACACCTGCCATTCCATGGGGGTCATCCATAGGGATCTCAAGCCTGAGAATTTCCTTCTGCTCAACAAAGACGAGAACTCTCCACTCAAGGCTACAGATTTCGGTCTATCAGTCTTTTACAAACAAGGAGAGGTGTTCAAGGATATTGTTGGCAGCGCATATTACATAGCACCAGAGGTGTTGAAGAGGAGATATGGACCAGAAGTCGATATCTGGAGTGTGGGAGTCATGCTATACATTCTTTTGAGTGGTGTTCCTCCTTTCTGGGCAGAGTCGGAACATGGGATATTCAACGCAATATTACGTGGTCACCTCGACTTTTCAAGCGACCCATGGCCTGCAATATCAGCTCAAGCAAAGGATCTTGTGAGGAAGATGTTGAATTCAGATCCCAAGCAGAGATTGACAGCCTTCCAAGTTCTAAGTCATCCATGGATCAAGGAGGATGGTGAAGCACCAGATGTTCCTCTCGACAATGCTGTTCTCAGCAGGCTCAAACAGTTCAAAGCAATGAATCAGTTTAAGAAAGTTGCACTTCGGGTTATCGCCGGTTGCTTATCAGAGGAAGAAATCATGGGATTGAAAGAGATGTTCAAGAGCATAGATACAGACAACAGTGGGACTATCACACTTGAAGAGCTCAAGCAAGGTCTTGCTAAGCAAGGCACCAAGTTATCTGAACACGAAGCTAAACAACTAATGGAAGCTGCCGATGCTGATGGGAACGGAACCATAGACTATGATGAGTTCATCACAGCAACGATGCACTTGAACAGAATGGATAGAGAAGAGCATCTCTACACTGCCTTCCAGCACTTCGATAAAGATAGCAGCGGGTTTATCACGACTGAAGAGCTAGAGTCAGCCCTCCGCGAATACGGGATGCATGATGGAAGGGACATAAGAGAAATCATTGCTGAAGTCGACGCTGATAATGACGGTCGAATCAACTACGATGAATTTGTGGCAATGATGAGAAAAGGAAACCCAGAACCAAACCTGAAAAAGCGGCGGGACGATGTATTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010769 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022603 GO:0022604 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045595 GO:0046777 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051510 GO:0051716 GO:0060284 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080092 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 Pkinase

Protein Analysis

507

Amino Acids

56.8

Weight (kDa)

5.75

Isoelectric Point (pI)

43.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	52 - 310	1.6e-77	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	54 - 304	2.1e-27	Protein tyrosine and serine/threonine kinase
EF-hand_7	PF13499	358 - 418	1.3e-15	EF-hand domain pair
EF-hand_1	PF00036	358 - 384	1.7e-07	EF hand domain
EF-hand_6	PF13405	358 - 384	1.2e-06	EF-hand domain
EF-hand_1	PF00036	393 - 420	8e-06	EF hand domain
EF-hand_7	PF13499	427 - 490	3.9e-17	EF-hand domain pair
EF-hand_6	PF13405	430 - 458	2.3e-06	EF-hand domain
EF-hand_1	PF00036	432 - 456	1e-05	EF hand domain
EF-hand_1	PF00036	464 - 491	1.4e-08	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0013786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12180 AT5G19360
fragaria_vesca	FvH4_3g27800
malus_domestica	MD03G1165100.v1.1 MD11G1184100.v1.1
prunus_persica	Prupe.4G263600_v2.0.a1
pyrus_communis	pycom12g08860
rosa_chinensis	RchiOBHm_Chr5g0050441
rosa_laevigata	RLG00000034702
rosa_multiflora	Rmu_co8347277.1_g000001 Rmu_sc0003202.1_g000003
rosa_roxburghii	Rroxscaffold_1G00030430
rosa_rugosa	Rorug05G0261000
rosa_samantha	Rh5AG332700 Rh5CG370000 Rh5DG355500
rosa_wichuraiana	Rw5G031440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	506
Acc36I	ACCTGC	1 cut(s)	506
AccB1I	GGYRCC	1 cut(s)	1157
AccB7I	CCANNNNNTGG	1 cut(s)	508
AccI	GTMKAC	1 cut(s)	1416
AccII	CGCG	1 cut(s)	1365
AciI	CCGC	6 cut(s)	178, 462, 1326, 1363, 1501, 1504
AclWI	GGATC	4 cut(s)	534, 861, 875, 935
AcsI	RAATTY	3 cut(s)	541, 874, 1451
AcuI	CTGAAG	2 cut(s)	1362, 1431
AdeI	CACNNNGTG	1 cut(s)	385
AfiI	CCNNNNNNNGG	7 cut(s)	47, 80, 83, 122, 388, 471, 508
AhdI	GACNNNNNGTC	1 cut(s)	695
AjiI	CACGTC	1 cut(s)	289
AjnI	CCWGG	2 cut(s)	79, 381
Alw21I	GWGCWC	3 cut(s)	209, 495, 1134
Alw44I	GTGCAC	2 cut(s)	205, 491
AlwI	GGATC	4 cut(s)	534, 861, 875, 935
AoxI	GGCC	3 cut(s)	104, 128, 827
ApaLI	GTGCAC	2 cut(s)	205, 491
ApeKI	GCWGC	5 cut(s)	455, 458, 645, 1199, 1323
ApoI	RAATTY	3 cut(s)	541, 874, 1451
ArsI	GACNNNNNNTTYG	1 cut(s)	1499
AspLEI	GCGC	1 cut(s)	650
AspS9I	GGNCC	4 cut(s)	104, 113, 474, 689
AsuHPI	GGTGA	6 cut(s)	205, 277, 371, 397, 794, 953
AvaII	GGWCC	3 cut(s)	113, 474, 689
BaeGI	GKGCMC	2 cut(s)	209, 495
BanI	GGYRCC	1 cut(s)	1157
BanII	GRGCYC	1 cut(s)	1134
BbsI	GAAGAC	1 cut(s)	282
Bbv12I	GWGCWC	3 cut(s)	209, 495, 1134
BbvI	GCAGC	5 cut(s)	442, 470, 657, 1186, 1335
BccI	CCATC	5 cut(s)	41, 382, 932, 1205, 1376
BciT130I	CCWGG	2 cut(s)	81, 383
BfaI	CTAG	2 cut(s)	122, 1349
BfmI	CTRYAG	2 cut(s)	456, 585
BfuAI	ACCTGC	1 cut(s)	506
BisI	GCNGC	7 cut(s)	456, 459, 462, 646, 1200, 1324, 1502
BlpI	GCTNAGC	1 cut(s)	1149
BlsI	GCNGC	7 cut(s)	457, 460, 463, 647, 1201, 1325, 1503
Bme1390I	CCNGG	2 cut(s)	81, 383
Bme18I	GGWCC	3 cut(s)	113, 474, 689
BmeRI	GACNNNNNGTC	1 cut(s)	695
BmgBI	CACGTC	1 cut(s)	289
BmgT120I	GGNCC	4 cut(s)	104, 113, 474, 689
BmiI	GGNNCC	3 cut(s)	60, 1159, 1222
BmrFI	CCNGG	2 cut(s)	81, 383
BmsI	GCATC	6 cut(s)	25, 77, 1195, 1245, 1294, 1365
BpiI	GAAGAC	1 cut(s)	282
BpmI	CTGGAG	1 cut(s)	727
Bpu1102I	GCTNAGC	1 cut(s)	1149
BpuEI	CTTGAG	5 cut(s)	332, 515, 563, 828, 1118
BsaAI	YACGTR	1 cut(s)	797
BsaJI	CCNNGG	5 cut(s)	30, 80, 507, 824, 923
BsaWI	WCCGGW	1 cut(s)	323
Bsc4I	CCNNNNNNNGG	7 cut(s)	47, 80, 83, 122, 388, 471, 508
Bse118I	RCCGGY	2 cut(s)	401, 1040
Bse3DI	GCAATG	3 cut(s)	1008, 1404, 1467
BseBI	CCWGG	2 cut(s)	81, 383
BseDI	CCNNGG	5 cut(s)	30, 80, 507, 824, 923
BseGI	GGATG	7 cut(s)	40, 68, 145, 516, 919, 943, 1380
BseLI	CCNNNNNNNGG	7 cut(s)	47, 80, 83, 122, 388, 471, 508
BseMI	GCAATG	3 cut(s)	1008, 1404, 1467
BseMII	CTCAG	2 cut(s)	528, 991
BseRI	GAGGAG	3 cut(s)	51, 307, 694
BseSI	GKGCMC	2 cut(s)	209, 495
BseXI	GCAGC	5 cut(s)	442, 470, 657, 1186, 1335
BseYI	CCCAGC	1 cut(s)	172
Bsh1236I	CGCG	1 cut(s)	1365
Bsh1285I	CGRYCG	1 cut(s)	1435
BshFI	GGCC	3 cut(s)	106, 130, 829
BshNI	GGYRCC	1 cut(s)	1157
BsiEI	CGRYCG	1 cut(s)	1435
BsiHKAI	GWGCWC	3 cut(s)	209, 495, 1134
BsiSI	CCGG	3 cut(s)	324, 402, 1041
BslFI	GGGAC	4 cut(s)	195, 1126, 1403, 1520
BslI	CCNNNNNNNGG	7 cut(s)	47, 80, 83, 122, 388, 471, 508
BsmFI	GGGAC	4 cut(s)	195, 1126, 1403, 1520
BsnI	GGCC	3 cut(s)	106, 130, 829
Bsp1286I	GDGCHC	3 cut(s)	209, 495, 1134
Bsp143I	GATC	5 cut(s)	486, 526, 853, 880, 927
Bsp1720I	GCTNAGC	1 cut(s)	1149
Bsp19I	CCATGG	3 cut(s)	507, 824, 923
BspACI	CCGC	6 cut(s)	178, 462, 1326, 1363, 1501, 1504
BspANI	GGCC	3 cut(s)	106, 130, 829
BspCNI	CTCAG	2 cut(s)	529, 990
BspFNI	CGCG	1 cut(s)	1365
BspLI	GGNNCC	3 cut(s)	60, 1159, 1222
BspMAI	CTGCAG	1 cut(s)	460
BspMI	ACCTGC	1 cut(s)	506
BspPI	GGATC	4 cut(s)	534, 861, 875, 935
BspQI	GCTCTTC	3 cut(s)	1122, 1275, 1338
BspT107I	GGYRCC	1 cut(s)	1157
BsrDI	GCAATG	3 cut(s)	1008, 1404, 1467
BsrFI	RCCGGY	2 cut(s)	401, 1040
BssAI	RCCGGY	2 cut(s)	401, 1040
BssECI	CCNNGG	5 cut(s)	30, 80, 507, 824, 923
BssMI	GATC	5 cut(s)	486, 526, 853, 880, 927
BssT1I	CCWWGG	3 cut(s)	507, 824, 923
Bst2UI	CCWGG	2 cut(s)	81, 383
Bst4CI	ACNGT	5 cut(s)	11, 186, 993, 1109, 1433
Bst6I	CTCTTC	4 cut(s)	671, 1122, 1275, 1338
BstAPI	GCANNNNNTGC	1 cut(s)	12
BstBAI	YACGTR	1 cut(s)	797
BstC8I	GCNNGC	6 cut(s)	93, 238, 260, 453, 831, 983
BstDEI	CTNAG	5 cut(s)	432, 537, 914, 977, 1149
BstDSI	CCRYGG	3 cut(s)	507, 824, 923
BstEII	GGTNACC	1 cut(s)	800
BstENI	CCTNNNNNAGG	2 cut(s)	120, 469
BstF5I	GGATG	7 cut(s)	40, 68, 145, 516, 919, 943, 1380
BstFNI	CGCG	1 cut(s)	1365
BstHHI	GCGC	1 cut(s)	650
BstKTI	GATC	5 cut(s)	489, 529, 856, 883, 930
BstMBI	GATC	5 cut(s)	486, 526, 853, 880, 927
BstMCI	CGRYCG	1 cut(s)	1435
BstMWI	GCNNNNNNNGC	6 cut(s)	12, 21, 65, 461, 839, 1205
BstNI	CCWGG	2 cut(s)	81, 383
BstNSI	RCATGY	1 cut(s)	240
BstPI	GGTNACC	1 cut(s)	800
BstSCI	CCNGG	2 cut(s)	79, 381
BstSFI	CTRYAG	2 cut(s)	456, 585
BstSLI	GKGCMC	2 cut(s)	209, 495
BstUI	CGCG	1 cut(s)	1365
BstV1I	GCAGC	5 cut(s)	442, 470, 657, 1186, 1335
BstV2I	GAAGAC	1 cut(s)	282
BstX2I	RGATCY	3 cut(s)	526, 853, 880
BstYI	RGATCY	3 cut(s)	526, 853, 880
BsuRI	GGCC	3 cut(s)	106, 130, 829
BtgI	CCRYGG	3 cut(s)	507, 824, 923
BtrI	CACGTC	1 cut(s)	289
BtsCI	GGATG	7 cut(s)	40, 68, 145, 516, 919, 943, 1380
BtsI	GCAGTG	1 cut(s)	1293
BtsIMutI	CAGTG	2 cut(s)	1114, 1293
BveI	ACCTGC	1 cut(s)	506
Cac8I	GCNNGC	6 cut(s)	93, 238, 260, 453, 831, 983
CfoI	GCGC	1 cut(s)	650
Cfr10I	RCCGGY	2 cut(s)	401, 1040
Cfr13I	GGNCC	4 cut(s)	104, 113, 474, 689
CseI	GACGC	2 cut(s)	205, 1427
CsiI	ACCWGGT	1 cut(s)	381
CviAII	CATG	9 cut(s)	237, 310, 508, 721, 773, 825, 924, 1066, 1379
DdeI	CTNAG	5 cut(s)	432, 537, 914, 977, 1149
DpnI	GATC	5 cut(s)	488, 528, 855, 882, 929
DpnII	GATC	5 cut(s)	486, 526, 853, 880, 927
DraIII	CACNNNGTG	1 cut(s)	385
DriI	GACNNNNNGTC	1 cut(s)	695
Eam1104I	CTCTTC	4 cut(s)	671, 1122, 1275, 1338
Eam1105I	GACNNNNNGTC	1 cut(s)	695
EarI	CTCTTC	4 cut(s)	671, 1122, 1275, 1338
Ecl136II	GAGCTC	1 cut(s)	1132
Eco130I	CCWWGG	3 cut(s)	507, 824, 923
Eco24I	GRGCYC	1 cut(s)	1134
Eco32I	GATATC	1 cut(s)	703
Eco47I	GGWCC	3 cut(s)	113, 474, 689
Eco53kI	GAGCTC	1 cut(s)	1132
Eco57I	CTGAAG	2 cut(s)	1362, 1431
Eco91I	GGTNACC	1 cut(s)	800
EcoICRI	GAGCTC	1 cut(s)	1132
EcoNI	CCTNNNNNAGG	2 cut(s)	120, 469
EcoO109I	RGGNCCY	1 cut(s)	104
EcoO65I	GGTNACC	1 cut(s)	800
EcoRI	GAATTC	1 cut(s)	874
EcoRII	CCWGG	2 cut(s)	79, 381
EcoRV	GATATC	1 cut(s)	703
EcoT14I	CCWWGG	3 cut(s)	507, 824, 923
EcoT22I	ATGCAT	1 cut(s)	1380
EcoT38I	GRGCYC	1 cut(s)	1134
ErhI	CCWWGG	3 cut(s)	507, 824, 923
FaeI	CATG	9 cut(s)	240, 313, 511, 724, 776, 828, 927, 1069, 1382
FalI	AAGNNNNNCTT	2 cut(s)	1011, 1043
FaqI	GGGAC	4 cut(s)	195, 1126, 1403, 1520
FatI	CATG	9 cut(s)	236, 309, 507, 720, 772, 824, 923, 1065, 1378
FauI	CCCGC	3 cut(s)	171, 1319, 1497
FblI	GTMKAC	1 cut(s)	1416
Fnu4HI	GCNGC	7 cut(s)	456, 459, 462, 646, 1200, 1324, 1502
FokI	GGATG	7 cut(s)	47, 55, 152, 503, 906, 950, 1387
FriOI	GRGCYC	1 cut(s)	1134
Fsp4HI	GCNGC	7 cut(s)	456, 459, 462, 646, 1200, 1324, 1502
FspBI	CTAG	2 cut(s)	122, 1349
GlaI	GCGC	1 cut(s)	649
GluI	GCNGC	7 cut(s)	456, 459, 462, 646, 1200, 1324, 1502
GsaI	CCCAGC	1 cut(s)	176
GsuI	CTGGAG	1 cut(s)	727
HaeIII	GGCC	3 cut(s)	106, 130, 829
HapII	CCGG	3 cut(s)	324, 402, 1041
HgaI	GACGC	2 cut(s)	205, 1427
HhaI	GCGC	1 cut(s)	650
Hin1II	CATG	9 cut(s)	240, 313, 511, 724, 776, 828, 927, 1069, 1382
Hin6I	GCGC	1 cut(s)	648
HinP1I	GCGC	1 cut(s)	648
HincII	GTYRAC	1 cut(s)	1417
HindII	GTYRAC	1 cut(s)	1417
HinfI	GANTC	6 cut(s)	423, 717, 764, 1006, 1352, 1437
HpaII	CCGG	3 cut(s)	324, 402, 1041
HphI	GGTGA	6 cut(s)	205, 277, 371, 397, 794, 953
Hpy166II	GTNNAC	4 cut(s)	207, 379, 493, 1417
Hpy188I	TCNGA	6 cut(s)	164, 486, 769, 880, 1054, 1171
Hpy188III	TCNNGA	4 cut(s)	706, 962, 1087, 1336
Hpy8I	GTNNAC	4 cut(s)	207, 379, 493, 1417
Hpy99I	CGWCG	1 cut(s)	1421
HpyAV	CCTTC	4 cut(s)	557, 913, 1309, 1380
HpyCH4III	ACNGT	5 cut(s)	11, 186, 993, 1109, 1433
HpyCH4IV	ACGT	2 cut(s)	288, 796
HpyF10VI	GCNNNNNNNGC	6 cut(s)	12, 21, 65, 461, 839, 1205
HpyF3I	CTNAG	5 cut(s)	432, 537, 914, 977, 1149
HpySE526I	ACGT	2 cut(s)	288, 796
Hsp92II	CATG	9 cut(s)	240, 313, 511, 724, 776, 828, 927, 1069, 1382
HspAI	GCGC	1 cut(s)	648
Kzo9I	GATC	5 cut(s)	486, 526, 853, 880, 927
LguI	GCTCTTC	3 cut(s)	1122, 1275, 1338
LmnI	GCTCC	6 cut(s)	64, 169, 353, 391, 409, 448
Lsp1109I	GCAGC	5 cut(s)	442, 470, 657, 1186, 1335
LweI	GCATC	6 cut(s)	25, 77, 1195, 1245, 1294, 1365
MabI	ACCWGGT	1 cut(s)	381
MaeI	CTAG	2 cut(s)	122, 1349
MaeII	ACGT	2 cut(s)	288, 796
MaeIII	GTNAC	3 cut(s)	50, 193, 800
MalI	GATC	5 cut(s)	488, 528, 855, 882, 929
MboI	GATC	5 cut(s)	486, 526, 853, 880, 927
MboII	GAAGA	7 cut(s)	287, 688, 877, 1070, 1139, 1292, 1355
MflI	RGATCY	3 cut(s)	526, 853, 880
MhlI	GDGCHC	3 cut(s)	209, 495, 1134
MluCI	AATT	3 cut(s)	541, 874, 1451
MlyI	GAGTC	3 cut(s)	726, 773, 1361
MmeI	TCCRAC	1 cut(s)	747
Mph1103I	ATGCAT	1 cut(s)	1380
MseI	TTAA	2 cut(s)	470, 1014
MspA1I	CMGCKG	1 cut(s)	1326
MspI	CCGG	3 cut(s)	324, 402, 1041
MspR9I	CCNGG	2 cut(s)	81, 383
MvaI	CCWGG	2 cut(s)	81, 383
MvnI	CGCG	1 cut(s)	1365
MwoI	GCNNNNNNNGC	6 cut(s)	12, 21, 65, 461, 839, 1205
NcoI	CCATGG	3 cut(s)	507, 824, 923
NdeII	GATC	5 cut(s)	486, 526, 853, 880, 927
NlaIII	CATG	9 cut(s)	240, 313, 511, 724, 776, 828, 927, 1069, 1382
NlaIV	GGNNCC	3 cut(s)	60, 1159, 1222
NmuCI	GTSAC	3 cut(s)	50, 193, 800
NsiI	ATGCAT	1 cut(s)	1380
NspI	RCATGY	1 cut(s)	240
PaeI	GCATGC	1 cut(s)	240
PaqCI	CACCTGC	1 cut(s)	506
PciSI	GCTCTTC	3 cut(s)	1122, 1275, 1338
PfeI	GAWTC	3 cut(s)	423, 1006, 1437
PflMI	CCANNNNNTGG	1 cut(s)	508
PkrI	GCNGC	7 cut(s)	457, 460, 463, 647, 1201, 1325, 1503
PleI	GAGTC	3 cut(s)	725, 772, 1360
PpsI	GAGTC	3 cut(s)	725, 772, 1360
Ppu21I	YACGTR	1 cut(s)	797
Psp124BI	GAGCTC	1 cut(s)	1134
Psp6I	CCWGG	2 cut(s)	79, 381
PspEI	GGTNACC	1 cut(s)	800
PspFI	CCCAGC	1 cut(s)	172
PspGI	CCWGG	2 cut(s)	79, 381
PspN4I	GGNNCC	3 cut(s)	60, 1159, 1222
PspPI	GGNCC	4 cut(s)	104, 113, 474, 689
PstI	CTGCAG	1 cut(s)	460
PsuI	RGATCY	3 cut(s)	526, 853, 880
SacI	GAGCTC	1 cut(s)	1134
SalI	GTCGAC	1 cut(s)	1415
SapI	GCTCTTC	3 cut(s)	1122, 1275, 1338
SaqAI	TTAA	2 cut(s)	470, 1014
SatI	GCNGC	7 cut(s)	456, 459, 462, 646, 1200, 1324, 1502
Sau3AI	GATC	5 cut(s)	486, 526, 853, 880, 927
Sau96I	GGNCC	4 cut(s)	104, 113, 474, 689
SchI	GAGTC	3 cut(s)	726, 773, 1361
ScrFI	CCNGG	2 cut(s)	81, 383
SduI	GDGCHC	3 cut(s)	209, 495, 1134
SexAI	ACCWGGT	1 cut(s)	381
SfaNI	GCATC	6 cut(s)	25, 77, 1195, 1245, 1294, 1365
SfcI	CTRYAG	2 cut(s)	456, 585
SinI	GGWCC	3 cut(s)	113, 474, 689
SmlI	CTYRAG	5 cut(s)	347, 530, 578, 843, 1133
SmoI	CTYRAG	5 cut(s)	347, 530, 578, 843, 1133
SphI	GCATGC	1 cut(s)	240
Sse9I	AATT	3 cut(s)	541, 874, 1451
SsiI	CCGC	6 cut(s)	178, 462, 1326, 1363, 1501, 1504
SspI	AATATT	1 cut(s)	792
SspMI	CTAG	2 cut(s)	122, 1349
SstI	GAGCTC	1 cut(s)	1134
StyD4I	CCNGG	2 cut(s)	79, 381
StyI	CCWWGG	3 cut(s)	507, 824, 923
TaaI	ACNGT	5 cut(s)	11, 186, 993, 1109, 1433
TaiI	ACGT	2 cut(s)	291, 799
TaqI	TCGA	7 cut(s)	149, 699, 807, 963, 1311, 1416, 1435
TaqII	GACCGA	2 cut(s)	435, 584
TasI	AATT	3 cut(s)	541, 874, 1451
TauI	GCSGC	2 cut(s)	464, 1504
TfiI	GAWTC	3 cut(s)	423, 1006, 1437
Tru1I	TTAA	2 cut(s)	470, 1014
Tru9I	TTAA	2 cut(s)	470, 1014
TscAI	CASTG	2 cut(s)	1114, 1300
TseFI	GTSAC	3 cut(s)	50, 193, 800
TseI	GCWGC	5 cut(s)	455, 458, 645, 1199, 1323
Tsp45I	GTSAC	3 cut(s)	50, 193, 800
TspDTI	ATGAA	3 cut(s)	1019, 1231, 1464
TspGWI	ACGGA	3 cut(s)	364, 461, 1233
TspRI	CASTG	2 cut(s)	1114, 1300
Van91I	CCANNNNNTGG	1 cut(s)	508
VneI	GTGCAC	2 cut(s)	205, 491
VpaK11BI	GGWCC	3 cut(s)	113, 474, 689
XagI	CCTNNNNNAGG	2 cut(s)	120, 469
XapI	RAATTY	3 cut(s)	541, 874, 1451
XceI	RCATGY	1 cut(s)	240
XcmI	CCANNNNNNNNNTGG	1 cut(s)	259
XmiI	GTMKAC	1 cut(s)	1416
XspI	CTAG	2 cut(s)	122, 1349
Zsp2I	ATGCAT	1 cut(s)	1380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.