Leucine Rich repeat
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0014731 RchiOBHm_Chr5g0079721 RchiOBHm_Chr6g0258861 RchiOBHm_Chr6g0258871 |
| rosa_roxburghii | Rroxscaffold_4G00301120 |
| rosa_rugosa | Rorug04G0188000 Rorug05G0418900 |
| rosa_samantha | Rh1BG260300 Rh2BG436200 Rh7CG489800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 174 |
| AclWI | GGATC | 2 cut(s) | 199, 212 |
| AcsI | RAATTY | 1 cut(s) | 28 |
| AcuI | CTGAAG | 1 cut(s) | 95 |
| AgsI | TTSAA | 1 cut(s) | 109 |
| AluBI | AGCT | 4 cut(s) | 73, 79, 150, 197 |
| AluI | AGCT | 4 cut(s) | 73, 79, 150, 197 |
| AlwI | GGATC | 2 cut(s) | 199, 212 |
| ApoI | RAATTY | 1 cut(s) | 28 |
| AsuNHI | GCTAGC | 1 cut(s) | 4 |
| BamHI | GGATCC | 1 cut(s) | 204 |
| BanI | GGYRCC | 1 cut(s) | 174 |
| BfaI | CTAG | 2 cut(s) | 5, 165 |
| BmiI | GGNNCC | 2 cut(s) | 176, 206 |
| BmtI | GCTAGC | 1 cut(s) | 8 |
| Bse3DI | GCAATG | 1 cut(s) | 142 |
| BseMI | GCAATG | 1 cut(s) | 142 |
| BshNI | GGYRCC | 1 cut(s) | 174 |
| BslFI | GGGAC | 1 cut(s) | 169 |
| BsmFI | GGGAC | 1 cut(s) | 169 |
| Bsp143I | GATC | 1 cut(s) | 204 |
| BspLI | GGNNCC | 2 cut(s) | 176, 206 |
| BspOI | GCTAGC | 1 cut(s) | 8 |
| BspPI | GGATC | 2 cut(s) | 199, 212 |
| BspT107I | GGYRCC | 1 cut(s) | 174 |
| BsrDI | GCAATG | 1 cut(s) | 142 |
| BssMI | GATC | 1 cut(s) | 204 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstKTI | GATC | 1 cut(s) | 207 |
| BstMBI | GATC | 1 cut(s) | 204 |
| BstX2I | RGATCY | 1 cut(s) | 204 |
| BstYI | RGATCY | 1 cut(s) | 204 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CviAII | CATG | 1 cut(s) | 25 |
| CviJI | RGCY | 5 cut(s) | 8, 73, 79, 150, 197 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 73, 79, 150, 197 |
| DpnI | GATC | 1 cut(s) | 206 |
| DpnII | GATC | 1 cut(s) | 204 |
| Eco57I | CTGAAG | 1 cut(s) | 95 |
| FaeI | CATG | 1 cut(s) | 28 |
| FaiI | YATR | 1 cut(s) | 26 |
| FaqI | GGGAC | 1 cut(s) | 169 |
| FatI | CATG | 1 cut(s) | 24 |
| FspBI | CTAG | 2 cut(s) | 5, 165 |
| Hin1II | CATG | 1 cut(s) | 28 |
| HindIII | AAGCTT | 1 cut(s) | 195 |
| HinfI | GANTC | 1 cut(s) | 65 |
| Hpy166II | GTNNAC | 1 cut(s) | 118 |
| Hpy188I | TCNGA | 1 cut(s) | 143 |
| Hpy188III | TCNNGA | 2 cut(s) | 165, 191 |
| Hpy8I | GTNNAC | 1 cut(s) | 118 |
| HpyAV | CCTTC | 1 cut(s) | 19 |
| HpyCH4V | TGCA | 2 cut(s) | 50, 135 |
| Hsp92II | CATG | 1 cut(s) | 28 |
| Kzo9I | GATC | 1 cut(s) | 204 |
| LpnPI | CCDG | 3 cut(s) | 24, 111, 138 |
| MaeI | CTAG | 2 cut(s) | 5, 165 |
| MalI | GATC | 1 cut(s) | 206 |
| MboI | GATC | 1 cut(s) | 204 |
| MflI | RGATCY | 1 cut(s) | 204 |
| MluCI | AATT | 1 cut(s) | 28 |
| MlyI | GAGTC | 1 cut(s) | 74 |
| MnlI | CCTC | 1 cut(s) | 188 |
| NdeII | GATC | 1 cut(s) | 204 |
| NheI | GCTAGC | 1 cut(s) | 4 |
| NlaIII | CATG | 1 cut(s) | 28 |
| NlaIV | GGNNCC | 2 cut(s) | 176, 206 |
| PleI | GAGTC | 1 cut(s) | 73 |
| PpsI | GAGTC | 1 cut(s) | 73 |
| PspN4I | GGNNCC | 2 cut(s) | 176, 206 |
| PsuI | RGATCY | 1 cut(s) | 204 |
| Sau3AI | GATC | 1 cut(s) | 204 |
| SchI | GAGTC | 1 cut(s) | 74 |
| SetI | ASST | 9 cut(s) | 43, 75, 81, 99, 104, 130, 152, 176, 199 |
| Sse9I | AATT | 1 cut(s) | 28 |
| SspI | AATATT | 1 cut(s) | 112 |
| SspMI | CTAG | 2 cut(s) | 5, 165 |
| TaqI | TCGA | 1 cut(s) | 192 |
| TasI | AATT | 1 cut(s) | 28 |
| TspDTI | ATGAA | 1 cut(s) | 41 |
| XapI | RAATTY | 1 cut(s) | 28 |
| XbaI | TCTAGA | 1 cut(s) | 164 |
| XspI | CTAG | 2 cut(s) | 5, 165 |